bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
M.mulatta
H.sapiens
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
XM_001106793
genome : 129,714,441 - 129,716,689 (2,249)
query : 1 - 982 (982/982)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSMMUT00000046043
genome : 129,715,954 - 129,726,392 (10,439)
query : 1 - 4,531 (4,531/4,531)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001107415
genome : 129,716,511 - 129,727,417 (10,907)
query : 1 - 5,604 (5,604/5,604)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSMMUT00000018471
genome : 129,716,715 - 129,726,392 (9,678)
query : 1 - 4,458 (4,458/4,458)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSMMUT00000018470
genome : 129,720,570 - 129,726,392 (5,823)
query : 1 - 4,423 (4,423/4,423)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001106726
genome : 129,725,549 - 129,764,442 (38,894)
query : 1 - 4,655 (4,655/4,655)
11 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001106549
genome : 129,725,549 - 129,764,141 (38,593)
query : 1 - 4,729 (4,729/4,729)
13 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001106611
genome : 129,725,549 - 129,764,122 (38,574)
query : 1 - 4,537 (4,537/4,537)
12 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001106481
genome : 129,725,549 - 129,764,082 (38,534)
query : 1 - 4,468 (4,468/4,468)
12 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001106288
genome : 129,725,549 - 129,763,432 (37,884)
query : 1 - 4,712 (4,712/4,712)
11 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001106356
genome : 129,725,549 - 129,763,432 (37,884)
query : 1 - 4,806 (4,806/4,806)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001106422
genome : 129,725,549 - 129,763,432 (37,884)
query : 1 - 4,788 (4,788/4,788)
12 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001106665
genome : 129,725,549 - 129,763,432 (37,884)
query : 1 - 4,743 (4,743/4,743)
11 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
ENSMMUT00000018475
genome : 129,726,425 - 129,762,971 (36,547)
query : 1 - 3,451 (3,451/3,451)
12 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
AB171945
genome : 129,726,613 - 129,733,435 (6,823)
query : 1 - 1,361 (1,361/1,379)
4 exons
identity = 0.998
3'(0.998;1.000;1.000)5'
coverage = 1.000
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
ENSMMUT00000018476
genome : 129,726,614 - 129,764,442 (37,829)
query : 1 - 3,590 (3,590/3,590)
11 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001105955
genome : 129,727,694 - 129,763,432 (35,739)
query : 1 - 3,582 (3,582/3,582)
10 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
HIT000050745
(
BC021024
)
genome : 129,714,443 - 129,716,328 (1,886)
query : 1 - 620 (620/641)
2 exons
identity = 0.929
3'(0.931;0.928)5'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000001156
(
AB037862
)
genome : 129,716,712 - 129,726,391 (9,680)
query : 1 - 5,378 (5,378/5,378)
10 exons
identity = 0.951
5'(0.976;0.895;0.970;0.978;0.989;0.988;0.982;
0.947;0.979;0.929)3'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000006379
(
AK023105
)
genome : 129,722,011 - 129,726,391 (4,381)
query : 1 - 3,277 (3,277/3,277)
8 exons
identity = 0.959
5'(0.974;0.978;0.989;0.988;0.982;0.947;0.970;
0.929)3'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000244494
(
AJ011122
)
genome : 129,726,614 - 129,770,597 (43,984)
query : 1 - 3,599 (3,599/3,599)
13 exons
identity = 0.949
3'(0.948;1.000;0.985)5'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
HIT000011305
(
AK054691
)
genome : 129,726,614 - 129,728,573 (1,960)
query : 1 - 1,974 (1,974/1,974)
1 exon
identity = 0.952
3'(0.952)5'
coverage = 1.000
H-InvDB(Advanced Search)
H-InvDB(Topic Annotation)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
Evola CSM: cross-species mapping view
Contig
129713964-129729963 F +
AluJo
MIRb
AluSx
AluY
AluSx
AluJb
(CGG)n
AluJb
AluSc
AluSx
AT_rich
AT_rich
MIR3