bases per tick :
2000
1000
500
200
100
50
20
10
5
2
kb first site :
homology :
M.domestica
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
ENSMODT00000021094
Representative transcript
genome : 149,095,368 - 149,108,854 (13,487)
query : 1 - 334 (334/334)
3 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000064892
Pan
sp. (Chimpanzee) : XM_001150299
Pongo
sp. (Orangutan) : ENSPPYT00000008132
Macaca
sp. (Macaque) : ENSMMUT00000000850
Macaca
sp. (Macaque) : XR_010326
Mus
sp. (Mouse) : BC025898
Rattus
sp. (Rat) : BC089990
Canis
sp. (Dog) : XM_849312
Equus
sp. (Horse) : ENSECAT00000026890
Bos
sp. (Cow) : BC111667
Monodelphis
sp. (Opossum) : XM_001373790
Gallus
sp. (Chicken) : ENSGALT00000028385
Danio
sp. (Zebrafish) : BC076249
Oryzias
sp. (Medaka) : ENSORLT00000006445
Tetraodon
sp. (Tetraodon) : CR705093
XM_001364687
genome : 149,095,375 - 149,108,854 (13,480)
query : 1 - 327 (327/327)
3 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001371923
Representative transcript
genome : 149,109,226 - 149,112,978 (3,753)
query : 1 - 528 (528/528)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000030365
Rattus
sp. (Rat) : XM_001062061
Canis
sp. (Dog) : XM_849308
Equus
sp. (Horse) : XM_001496623
Bos
sp. (Cow) : BC103171
Danio
sp. (Zebrafish) : BC093151
Oryzias
sp. (Medaka) : ENSORLT00000006437
Tetraodon
sp. (Tetraodon) : CR723951
Takifugu
sp. (Fugu) : SINFRUT00000147703
ENSMODT00000021097
genome : 149,109,310 - 149,112,978 (3,669)
query : 1 - 444 (444/444)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
ENSMODT00000021110
genome : 149,115,595 - 149,132,382 (16,788)
query : 1 - 2,574 (2,574/2,574)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
XM_001364756
Representative transcript
genome : 149,115,595 - 149,132,382 (16,788)
query : 1 - 2,574 (2,574/2,574)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
Ortholog candidate
H.sapiens
(Human) : HIT000423974
Pongo
sp. (Orangutan) : ENSPPYT00000008134
Macaca
sp. (Macaque) : XR_009691
Mus
sp. (Mouse) : AK144437
Rattus
sp. (Rat) : BC099777
Canis
sp. (Dog) : XM_860473
Equus
sp. (Horse) : XM_001494736
Bos
sp. (Cow) : BC134588
Gallus
sp. (Chicken) : ENSGALT00000012032
Danio
sp. (Zebrafish) : BC074097
Oryzias
sp. (Medaka) : ENSORLT00000006514
Tetraodon
sp. (Tetraodon) : GSTENT00024204001
Tetraodon
sp. (Tetraodon) : GSTENT00034404001
Takifugu
sp. (Fugu) : SINFRUT00000147713
Contig
149103102-149119101 F +
Mdo1LTR3x
SINE1_Mdo
L1_Opos
MAR1a_Mdo
MIRc
SINE1_Mdo
MIR3_MarsB
HAL1_Opos
L2_Mars
LTR28_MD
L2_Mars
L1_Mdo6
SINE1_Mdo
(TA)n
SINE1_Mdo
L2_Mars
MIR3_MarsB
L2_Mars
SINE1_Mdo
MIRc
MAR1a_Mdo
LTR123_MD
MAR1c_Mdo
MIR3_MarsB
MamSINE1
SINE1a_Mdo
L2_Mars
MIR3
MIRb
MIR3_MarsA