bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0028415
HIT000047344
(
AK127471
)
(POU domain, class 3, transcription factor 4; Brain-specific homeobox/POU domain protein 4; Brain-4; Brn-4; Octamer-binding protein 9; Oct-9; Octamer-binding transcription factor 9; OTF-9;)
genome : 82,761,031 - 82,764,222 (3,192)
query : 1 - 3,193 (3,193/3,194)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11.5, mito 11, cyto_nucl 9.5, cyto 4.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028415)
Ortholog candidate ( ->
Evola
)
Oryzias
sp. (Medaka) : ENSORLT00000013262
Pongo
sp. (Orangutan) : ENSPPYT00000023925
Tetraodon
sp. (Tetraodon) : GSTENT00029330001
Takifugu
sp. (Fugu) : SINFRUT00000177301
Mus
sp. (Mouse) : X66603
Macaca
sp. (Macaque) : XM_001104059
Monodelphis
sp. (Opossum) : XM_001369987
Equus
sp. (Horse) : XM_001501034
Canis
sp. (Dog) : XM_549108
Bos
sp. (Cow) : XM_589021
Rattus
sp. (Rat) : Z11834
HIX0028415
HIT000197352 (
NM_000307
)
(POU domain, class 3, transcription factor 4; Brain-specific homeobox/POU domain protein 4; Brain-4; Brn-4; Octamer-binding protein 9; Oct-9; Octamer-binding transcription factor 9; OTF-9;)
genome : 82,763,269 - 82,764,775 (1,507)
query : 1 - 1,507 (1,507/1,507)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028415)
HIX0028415
HIT000354480 (
ENST00000373200
)
(POU domain, class 3, transcription factor 4; Brain-specific homeobox/POU domain protein 4; Brain-4; Brn-4; Octamer-binding protein 9; Oct-9; Octamer-binding transcription factor 9; OTF-9;)
genome : 82,763,269 - 82,764,775 (1,507)
query : 1 - 1,507 (1,507/1,507)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028415)
HIX0028415
HIT000433833
(
AK314967
)
(POU domain, class 3, transcription factor 4; Brain-specific homeobox/POU domain protein 4; Brain-4; Brn-4; Octamer-binding protein 9; Oct-9; Octamer-binding transcription factor 9; OTF-9;)
genome : 82,763,269 - 82,764,418 (1,150)
query : 1 - 1,150 (1,150/1,150)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
InterPro :
IPR000327 : POU-specific
IPR010982 : Lambda repressor-like, DNA-binding domain
IPR013847 : POU domain
IPR017970 : Homeobox, conserved site
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028415)
HIX0028415
HIT000323917
(
X82324
)
Representative transcript
(POU domain, class 3, transcription factor 4; Brain-specific homeobox/POU domain protein 4; Brain-4; Brn-4; Octamer-binding protein 9; Oct-9; Octamer-binding transcription factor 9; OTF-9;)
genome : 82,763,301 - 82,764,775 (1,475)
query : 1 - 1,481 (1,481/1,481)
1 exon
identity = 0.992
5'(0.992)3'
coverage = 1.000
InterPro :
IPR000327 : POU-specific
IPR010982 : Lambda repressor-like, DNA-binding domain
IPR013847 : POU domain
IPR017970 : Homeobox, conserved site
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028415)
HIX0177069
HIT000520827 (
ENST00000422893
)
(Proteasome maturation factor UMP1 family protein.)
genome : 82,814,904 - 82,815,320 (417)
query : 1 - 417 (417/417)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0177069)
HIX0148526
HIT000111463_02 (
ENST00000276603
)
(Telomere repeat-binding factor, dimerisation domain containing protein.)
genome : 83,003,487 - 83,005,110 (1,624)
query : 47 - 1,677 (1,631/1,677)
1 exon
identity = 0.961
3'(0.961)5'
coverage = 0.973
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 16, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148526)
HIX0148526
HIT000482634 (
ENST00000399580
)
(Telomere repeat-binding factor, dimerisation domain containing protein.)
genome : 83,003,833 - 83,004,947 (1,115)
query : 1 - 1,115 (1,115/1,115)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 13.5, cyto_plas 12.5, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0148526)
HIX0056226
HIT000398378 (
NM_021118
)
(Cylicin-1; Cylicin I; Multiple-band polypeptide I;)
genome : 83,116,134 - 83,141,708 (25,575)
query : 1 - 2,129 (2,129/2,143)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 2, cysk 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056226)
HIX0056226
HIT000724998 (
NM_001271680
)
(Cylicin-1; Cylicin I; Multiple-band polypeptide I;)
genome : 83,116,134 - 83,141,708 (25,575)
query : 1 - 380 (380/394)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11.5, nucl 7.5, extr 5, mito 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056226)
HIX0056226
HIT000259808
(
BC058019
)
(Cylicin-1 isoform 2.)
genome : 83,116,154 - 83,128,694 (12,541)
query : 5 - 1,019 (1,015/1,045)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.996
InterPro :
IPR026189 : Cylicin
IPR029354 : Cylicin, N-terminal
GO :
0005200 : Molecular Function : structural constituent of cytoskeleton
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto 2, mito 2, cysk 2, cyto_mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056226)
HIX0056226
HIT000090435
(
BC021669
)
(Cylicin-1 isoform 2.)
genome : 83,116,154 - 83,128,659 (12,506)
query : 5 - 984 (980/1,009)
4 exons
identity = 0.998
5'(0.981;1.000;1.000;0.999)3'
coverage = 0.996
InterPro :
IPR026189 : Cylicin
IPR029354 : Cylicin, N-terminal
GO :
0005200 : Molecular Function : structural constituent of cytoskeleton
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto 2, mito 2, cysk 2, cyto_mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056226)
HIX0056226
HIT000126054 (
ENST00000329312
)
(Cylicin-1; Cylicin I; Multiple-band polypeptide I;)
genome : 83,116,154 - 83,141,705 (25,552)
query : 1 - 2,106 (2,106/2,106)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 2, cysk 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056226)
HIX0056226
HIT000264310
(
BC070355
)
(Cylicin-1 isoform 2.)
genome : 83,116,154 - 83,128,990 (12,837)
query : 1 - 1,308 (1,308/1,337)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR026189 : Cylicin
IPR029354 : Cylicin, N-terminal
GO :
0005200 : Molecular Function : structural constituent of cytoskeleton
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056226)
HIX0056226
HIT000389053
(
BC126461
)
Representative transcript
(Cylicin-1; Cylicin I; Multiple-band polypeptide I;)
genome : 83,116,170 - 83,141,626 (25,457)
query : 1 - 2,011 (2,011/2,011)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR026189 : Cylicin
IPR029354 : Cylicin, N-terminal
GO :
0005200 : Molecular Function : structural constituent of cytoskeleton
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 2, cysk 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056226)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB169048
Canis
sp. (Dog) : ENSCAFT00000027515
Pongo
sp. (Orangutan) : ENSPPYT00000023927
Rattus
sp. (Rat) : ENSRNOT00000034564
Equus
sp. (Horse) : XM_001502314
Pan
sp. (Chimpanzee) : XR_020832
HIX0056226
HIT000326660
(
Z22780
)
(Cylicin-1; Cylicin I; Multiple-band polypeptide I;)
genome : 83,127,894 - 83,141,705 (13,812)
query : 20 - 1,911 (1,892/1,913)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.989
InterPro :
IPR026189 : Cylicin
IPR029354 : Cylicin, N-terminal
GO :
0005200 : Molecular Function : structural constituent of cytoskeleton
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056226)
HIX0056226
HIT000095382
(
BC038787
)
(Cylicin-1; Cylicin I; Multiple-band polypeptide I;)
genome : 83,127,999 - 83,254,461 (126,463)
query : 2 - 1,804 (1,803/1,819)
2 exons
identity = 0.999
5'(0.999;1.000)3'
coverage = 0.999
InterPro :
IPR026189 : Cylicin
GO :
0005200 : Molecular Function : structural constituent of cytoskeleton
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056226)
HIX0056156
HIT000204863 (
NM_014496
)
(Ribosomal protein S6 kinase alpha-6; S6K-alpha-6; EC=2.7.11.1; 90 kDa ribosomal protein S6 kinase 6; p90-RSK 6; p90RSK6; Ribosomal S6 kinase 4; RSK-4; pp90RSK4;)
genome : 83,313,354 - 83,442,943 (129,590)
query : 1 - 8,205 (8,205/8,223)
22 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16.3333, nucl 13,
cyto_mito 10.1667
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056156)
HIX0056156
HIT000006378
(
AK023104
)
(Hypothetical short protein.)
genome : 83,315,351 - 83,317,821 (2,471)
query : 1 - 2,470 (2,470/2,470)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 3.5, cyto_nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056156)
HIX0056156
HIT000009575
(
AK026301
)
(Hypothetical short protein.)
genome : 83,316,396 - 83,318,644 (2,249)
query : 1 - 2,248 (2,248/2,263)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056156)
HIX0056156
HIT000072887
(
AF184965
)
Representative transcript
(Ribosomal protein S6 kinase alpha-6; S6K-alpha-6; EC=2.7.11.1; 90 kDa ribosomal protein S6 kinase 6; p90-RSK 6; p90RSK6; Ribosomal S6 kinase 4; RSK-4; pp90RSK4;)
genome : 83,318,984 - 83,442,915 (123,932)
query : 73 - 2,619 (2,547/2,640)
22 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.989)5'
coverage = 0.992
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000961 : AGC-kinase, C-terminal
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR017892 : Protein kinase, C-terminal
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16.3333, nucl 13,
cyto_mito 10.1667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056156)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK049349
Danio
sp. (Zebrafish) : BC045478
Danio
sp. (Zebrafish) : BC133092
Oryzias
sp. (Medaka) : ENSORLT00000010673
Pongo
sp. (Orangutan) : ENSPPYT00000023928
Tetraodon
sp. (Tetraodon) : GSTENT00029331001
Takifugu
sp. (Fugu) : SINFRUT00000138658
Rattus
sp. (Rat) : XM_001061436
Macaca
sp. (Macaque) : XM_001104231
Monodelphis
sp. (Opossum) : XM_001370737
Equus
sp. (Horse) : XM_001915022
Gallus
sp. (Chicken) : XM_420257
Canis
sp. (Dog) : XM_549109
Pan
sp. (Chimpanzee) : XR_020843
HIX0056156
HIT000108562 (
ENST00000262752
)
(Ribosomal protein S6 kinase alpha-6; S6K-alpha-6; EC=2.7.11.1; 90 kDa ribosomal protein S6 kinase 6; p90-RSK 6; p90RSK6; Ribosomal S6 kinase 4; RSK-4; pp90RSK4;)
genome : 83,318,984 - 83,442,915 (123,932)
query : 1 - 2,547 (2,547/2,547)
22 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16.3333, nucl 13,
cyto_mito 10.1667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056156)
HIX0056156
HIT000502096
(
BC143648
)
(Ribosomal protein S6 kinase alpha-6; S6K-alpha-6; EC=2.7.11.1; 90 kDa ribosomal protein S6 kinase 6; p90-RSK 6; p90RSK6; Ribosomal S6 kinase 4; RSK-4; pp90RSK4;)
genome : 83,319,256 - 83,442,933 (123,678)
query : 1 - 2,515 (2,515/2,515)
24 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.991)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000961 : AGC-kinase, C-terminal
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR017892 : Protein kinase, C-terminal
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 14.3333, cyto 8.5,
cyto_plas 5.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056156)
HIX0056156
HIT000642444 (
ENST00000543399
)
(Ribosomal protein S6 kinase alpha-6; S6K-alpha-6; EC=2.7.11.1; 90 kDa ribosomal protein S6 kinase 6; p90-RSK 6; p90RSK6; Ribosomal S6 kinase 4; RSK-4; pp90RSK4;)
genome : 83,319,256 - 83,442,933 (123,678)
query : 1 - 2,515 (2,515/2,515)
24 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 14.3333, cyto 8.5,
cyto_plas 5.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056156)
HIX0056156
HIT000502095
(
BC143647
)
(Ribosomal protein S6 kinase alpha-3; S6K-alpha-3; EC=2.7.11.1; 90 kDa ribosomal protein S6 kinase 3; p90-RSK 3; p90RSK3; Insulin-stimulated protein kinase 1; ISPK-1; MAP kinase-activated protein kinase 1b; MAPK-activated protein kinase 1b; MAPKAP kinase 1b; MAPKAPK-1b; Ribosomal S6 kinase 2; RSK-2; pp90RSK2;)
genome : 83,319,263 - 83,442,933 (123,671)
query : 1 - 2,434 (2,434/2,434)
23 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.991)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000961 : AGC-kinase, C-terminal
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR017892 : Protein kinase, C-terminal
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056156)
HIX0056156
HIT000432106
(
AK313240
)
(Ribosomal protein S6 kinase alpha-6; S6K-alpha-6; EC=2.7.11.1; 90 kDa ribosomal protein S6 kinase 6; p90-RSK 6; p90RSK6; Ribosomal S6 kinase 4; RSK-4; pp90RSK4;)
genome : 83,319,285 - 83,442,912 (123,628)
query : 11 - 2,253 (2,243/2,253)
22 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.996
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000961 : AGC-kinase, C-terminal
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR017892 : Protein kinase, C-terminal
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16.3333, nucl 13,
cyto_mito 10.1667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056156)
HIX0056156
HIT000268502
(
CR536566
)
(Ribosomal protein S6 kinase alpha-6; S6K-alpha-6; EC=2.7.11.1; 90 kDa ribosomal protein S6 kinase 6; p90-RSK 6; p90RSK6; Ribosomal S6 kinase 4; RSK-4; pp90RSK4;)
genome : 83,319,285 - 83,442,907 (123,623)
query : 1 - 2,238 (2,238/2,238)
22 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;0.994;1.000;0.989;
1.000;1.000;0.990;1.000;0.978;1.000;1.000;
1.000;1.000;1.000;0.988;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000961 : AGC-kinase, C-terminal
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR008271 : Serine/threonine-protein kinase, active site
IPR017892 : Protein kinase, C-terminal
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16.5, nucl 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056156)
HIX0056156
HIT000598699 (
ENST00000495332
)
(Ribosomal protein S6 kinase alpha-6; S6K-alpha-6; EC=2.7.11.1; 90 kDa ribosomal protein S6 kinase 6; p90-RSK 6; p90RSK6; Ribosomal S6 kinase 4; RSK-4; pp90RSK4;)
genome : 83,351,202 - 83,361,469 (10,268)
query : 1 - 604 (604/604)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 9, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056156)
HIX0056156
HIT000429212
(
AK310346
)
(Ribosomal protein S6 kinase alpha-6; S6K-alpha-6; EC=2.7.11.1; 90 kDa ribosomal protein S6 kinase 6; p90-RSK 6; p90RSK6; Ribosomal S6 kinase 4; RSK-4; pp90RSK4;)
genome : 83,372,396 - 83,415,443 (43,048)
query : 3 - 953 (951/953)
10 exons
identity = 0.999
3'(0.985;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.998
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 14.6667, cyto_plas 12.6667, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056156)
HIX0056156
HIT000565646 (
ENST00000460730
)
(Ribosomal protein S6 kinase alpha-6; S6K-alpha-6; EC=2.7.11.1; 90 kDa ribosomal protein S6 kinase 6; p90-RSK 6; p90RSK6; Ribosomal S6 kinase 4; RSK-4; pp90RSK4;)
genome : 83,411,083 - 83,442,906 (31,824)
query : 1 - 575 (575/575)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto_nucl 9.5, cyto 8.5, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056156)
HIX0019263
HIT000057813
(
BX649166
)
Representative transcript
(Highly divergent homeobox;)
genome : 83,572,882 - 83,757,461 (184,580)
query : 2 - 6,201 (6,200/6,218)
10 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019263)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ719966
Mus
sp. (Mouse) : BC116300
Oryzias
sp. (Medaka) : ENSORLT00000010634
Pongo
sp. (Orangutan) : ENSPPYT00000023929
Macaca
sp. (Macaque) : XM_001104473
Monodelphis
sp. (Opossum) : XM_001362619
Equus
sp. (Horse) : XM_001500997
Rattus
sp. (Rat) : XM_229207
Canis
sp. (Dog) : XM_549110
Pan
sp. (Chimpanzee) : XR_020672
HIX0019263
HIT000212893 (
NM_144657
)
(Highly divergent homeobox;)
genome : 83,572,882 - 83,757,487 (184,606)
query : 1 - 6,226 (6,226/6,226)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019263)
HIX0019263
HIT000655186 (
NM_001177478
)
(Highly divergent homeobox isoform 2.)
genome : 83,572,882 - 83,757,487 (184,606)
query : 1 - 6,188 (6,188/6,188)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 15, cyto 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019263)
HIX0019263
HIT000655187 (
NM_001177479
)
(Highly divergent homeobox;)
genome : 83,572,882 - 83,757,487 (184,606)
query : 1 - 6,335 (6,335/6,335)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019263)
HIX0019263
HIT000114953 (
ENST00000297977
)
(Highly divergent homeobox;)
genome : 83,572,882 - 83,757,461 (184,580)
query : 1 - 6,200 (6,200/6,200)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019263)
HIX0019263
HIT000054895
(
BX538112
)
(Highly divergent homeobox;)
genome : 83,576,209 - 83,757,458 (181,250)
query : 2 - 2,871 (2,870/2,893)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019263)
HIX0019263
HIT000354457 (
ENST00000373177
)
(Highly divergent homeobox isoform 2.)
genome : 83,576,205 - 83,757,461 (181,257)
query : 1 - 2,839 (2,839/2,839)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 15, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019263)
HIX0019263
HIT000011854
(
AK055240
)
(Highly divergent homeobox isoform 2.)
genome : 83,576,325 - 83,757,461 (181,137)
query : 1 - 2,719 (2,719/2,719)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 15, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019263)
HIX0019263
HIT000422847
(
AK290050
)
(Highly divergent homeobox;)
genome : 83,576,851 - 83,757,461 (180,611)
query : 1 - 2,231 (2,231/2,231)
10 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.993;1.000;
0.999;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019263)
HIX0019263
HIT000337072
(
BC101720
)
(Highly divergent homeobox;)
genome : 83,576,851 - 83,757,399 (180,549)
query : 1 - 2,169 (2,169/2,169)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019263)
HIX0019263
HIT000337073
(
BC101722
)
(Highly divergent homeobox;)
genome : 83,576,851 - 83,757,399 (180,549)
query : 1 - 2,169 (2,169/2,169)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019263)
HIX0019263
HIT000501973
(
BC143522
)
(Highly divergent homeobox;)
genome : 83,576,852 - 83,757,399 (180,548)
query : 1 - 2,277 (2,277/2,277)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.999;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019263)
HIX0019263
HIT000606646 (
ENST00000506585
)
(Highly divergent homeobox;)
genome : 83,576,852 - 83,757,399 (180,548)
query : 1 - 2,277 (2,277/2,277)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019263)
HIX0177419
HIT000545443 (
ENST00000447509
)
(Non-protein coding transcript.)
genome : 83,658,906 - 83,659,032 (127)
query : 1 - 127 (127/127)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0177419)
HIX0019263
HIT000576526 (
ENST00000472135
)
(Highly divergent homeobox isoform 2.)
genome : 83,694,981 - 83,724,584 (29,604)
query : 1 - 1,718 (1,718/1,718)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 13.5, cyto 7, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019263)
HIX0019263
HIT000547487 (
ENST00000449553
)
(Highly divergent homeobox isoform 2.)
genome : 83,723,936 - 83,757,487 (33,552)
query : 1 - 786 (786/786)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15, cyto 9.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019263)
HIX0019263
HIT000570204 (
ENST00000465509
)
(Hypothetical short protein.)
genome : 83,755,033 - 83,757,461 (2,429)
query : 1 - 475 (475/475)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019263)
HIX0056389
HIT000088633
(
BC015351
)
Representative transcript
(Protein SET; HLA-DR-associated protein II; Inhibitor of granzyme A-activated DNase; IGAAD; PHAPII; Phosphatase 2A inhibitor I2PP2A; I-2PP2A; Template-activating factor I; TAF-I;)
genome : 84,010,006 - 84,011,479 (1,474)
query : 1 - 1,474 (1,474/1,489)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR002164 : Nucleosome assembly protein (NAP)
GO :
0005634 : Cellular Component : nucleus
0006334 : Biological Process : nucleosome assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 14.1667, cyto_plas 10.6667,
nucl 5.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056389)
Ortholog candidate ( ->
Evola
)
Takifugu
sp. (Fugu) : SINFRUT00000155617
Pan
sp. (Chimpanzee) : XM_001145345
Macaca
sp. (Macaque) : XR_009679
HIX0056389
HIT000553651 (
ENST00000455717
)
(Protein SET; HLA-DR-associated protein II; Inhibitor of granzyme A-activated DNase; IGAAD; PHAPII; Phosphatase 2A inhibitor I2PP2A; I-2PP2A; Template-activating factor I; TAF-I;)
genome : 84,010,144 - 84,011,011 (868)
query : 1 - 868 (868/868)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 14.1667, cyto_plas 10.6667,
nucl 5.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0056389)
AL160266.25
82500001-82597715 F +
NCBI
AL359972.10
82597716-82676345 F +
NCBI
Z82170.2
82676346-82803492 F +
NCBI
AL121882.10
82803493-82891183 F +
NCBI
AL591396.4
82891184-82912526 F +
NCBI
AL445306.7
82912527-83068548 F +
NCBI
AL158143.14
83068549-83095511 F +
NCBI
AL627233.9
83095512-83169034 F +
NCBI
AL354653.26
83169035-83340794 F +
NCBI
AL603626.6
83340795-83346483 F +
NCBI
AL389887.7
83346484-83487703 F +
NCBI
AL035552.9
83487704-83637334 F +
NCBI
AL450471.9
83637335-83687425 F +
NCBI
AL022160.1
83687426-83821799 F -
NCBI
AL121867.13
83821800-83952937 F +
NCBI
Z95126.1
83952938-84100000 F +
NCBI