bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0020425
HIT000207922_01 (
NM_020411
)
(G antigen family D member 2 isoform a.)
genome : 52,255,221 - 52,260,363 (5,143)
query : 1 - 620 (620/634)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR008625 : GAGE
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito_nucl 5.5, nucl 5, cyto 5, mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000075067_01
(
AF251237
)
Representative transcript
(G antigen family D member 2 isoform a.)
genome : 52,255,221 - 52,260,355 (5,135)
query : 1 - 612 (612/626)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito_nucl 5.5, nucl 5, cyto 5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000658728_02 (
NR_033256
)
(G antigen family D member 2 isoform a.)
genome : 52,255,221 - 52,260,154 (4,934)
query : 1 - 731 (731/745)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, mito 8.5, cyto 7.5, mito_nucl 6.83333,
cyto_nucl 6.33333, nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000034427_01
(
BC009538
)
(G antigen family D member 2 isoform a.)
genome : 52,255,221 - 52,259,938 (4,718)
query : 1 - 515 (515/529)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR008625 : GAGE
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 10, cyto_nucl 5, E.R._mito 5,
mito_pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000212190_01 (
NM_133430
)
(G antigen family D member 2 isoform d.)
genome : 52,255,221 - 52,260,210 (4,990)
query : 1 - 483 (483/492)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 11.5, mito 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000247197_01
(
AJ318879
)
(G antigen family D member 2 isoform d.)
genome : 52,255,221 - 52,260,199 (4,979)
query : 1 - 472 (472/481)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 11.5, mito 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000247196_01
(
AJ318878
)
(G antigen family D member 2 isoform a.)
genome : 52,255,221 - 52,260,154 (4,934)
query : 1 - 731 (731/740)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, mito 8.5, cyto 7.5, mito_nucl 6.83333,
cyto_nucl 6.33333, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000246551_01
(
AJ290447
)
(G antigen family D member 2 isoform a.)
genome : 52,255,216 - 52,260,199 (4,984)
query : 1 - 461 (461/463)
4 exons
identity = 0.996
3'(0.991;1.000;1.000;0.987)5'
coverage = 0.996
InterPro :
IPR008625 : GAGE
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 10, cyto_nucl 5, E.R._mito 5,
mito_pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000485126_01 (
NM_001097592
)
(G antigen family D member 2 isoform a.)
genome : 52,255,219 - 52,260,363 (5,145)
query : 1 - 622 (622/622)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito_nucl 5.5, nucl 5, cyto 5, mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000485128_01 (
NM_001097594
)
(G antigen family D member 2 isoform a.)
genome : 52,255,219 - 52,260,363 (5,145)
query : 1 - 622 (622/622)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito_nucl 5.5, nucl 5, cyto 5, mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000485131_01 (
NM_001097597
)
(G antigen family D member 2 isoform a.)
genome : 52,255,219 - 52,260,363 (5,145)
query : 1 - 622 (622/622)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito_nucl 5.5, nucl 5, cyto 5, mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000485137_01 (
NM_001097604
)
(G antigen family D member 2 isoform a.)
genome : 52,255,219 - 52,260,363 (5,145)
query : 1 - 622 (622/622)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito_nucl 5.5, nucl 5, cyto 5, mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000356850_01 (
ENST00000375570
)
(G antigen family D member 2 isoform a.)
genome : 52,255,219 - 52,260,355 (5,137)
query : 1 - 614 (614/614)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR008625 : GAGE
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito_nucl 5.5, nucl 5, cyto 5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000356858_01 (
ENST00000375578
)
(G antigen family D member 2 isoform a.)
genome : 52,255,219 - 52,260,355 (5,137)
query : 1 - 614 (614/614)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR008625 : GAGE
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito_nucl 5.5, nucl 5, cyto 5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000356869_01 (
ENST00000375589
)
(G antigen family D member 2 isoform a.)
genome : 52,255,219 - 52,260,355 (5,137)
query : 1 - 614 (614/614)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR008625 : GAGE
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito_nucl 5.5, nucl 5, cyto 5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000356882_01 (
ENST00000375602
)
(G antigen family D member 2 isoform a.)
genome : 52,255,219 - 52,260,355 (5,137)
query : 1 - 614 (614/614)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR008625 : GAGE
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito_nucl 5.5, nucl 5, cyto 5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000356896_01 (
ENST00000375616
)
(G antigen family D member 2 isoform a.)
genome : 52,255,219 - 52,260,355 (5,137)
query : 1 - 614 (614/614)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR008625 : GAGE
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito_nucl 5.5, nucl 5, cyto 5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000479834_01 (
ENST00000396497
)
(G antigen family D member 2 isoform a.)
genome : 52,255,219 - 52,260,355 (5,137)
query : 1 - 614 (614/614)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 13.5, extr 9, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000482826_01 (
ENST00000399795
)
(G antigen family D member 2 isoform a.)
genome : 52,255,219 - 52,260,355 (5,137)
query : 1 - 614 (614/614)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 13.5, extr 9, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000482831_01 (
ENST00000399800
)
(G antigen family D member 2 isoform a.)
genome : 52,255,219 - 52,260,355 (5,137)
query : 1 - 614 (614/614)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 13.5, extr 9, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000485127_01 (
NM_001097593
)
(G antigen family D member 2 isoform d.)
genome : 52,255,219 - 52,260,210 (4,992)
query : 1 - 485 (485/485)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 11.5, mito 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000485130_01 (
NM_001097596
)
(G antigen family D member 2 isoform d.)
genome : 52,255,219 - 52,260,210 (4,992)
query : 1 - 485 (485/485)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 11.5, mito 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000485132_01 (
NM_001097598
)
(G antigen family D member 2 isoform d.)
genome : 52,255,219 - 52,260,210 (4,992)
query : 1 - 485 (485/485)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 11.5, mito 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000485138_01 (
NM_001097605
)
(G antigen family D member 2 isoform d.)
genome : 52,255,219 - 52,260,210 (4,992)
query : 1 - 485 (485/485)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 11.5, mito 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000356239_02 (
ENST00000374959
)
(G antigen family D member 2 isoform d.)
genome : 52,255,219 - 52,260,199 (4,981)
query : 1 - 458 (458/458)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR008625 : GAGE
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 10, cyto_nucl 5, E.R._mito 5,
mito_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000356868_01 (
ENST00000375588
)
(G antigen family D member 2 isoform d.)
genome : 52,255,219 - 52,260,199 (4,981)
query : 1 - 474 (474/474)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 11.5, mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000356880_01 (
ENST00000375600
)
(G antigen family D member 2 isoform d.)
genome : 52,255,219 - 52,260,199 (4,981)
query : 1 - 474 (474/474)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 11.5, mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000658723_02 (
NR_033251
)
(G antigen family D member 2 isoform a.)
genome : 52,255,219 - 52,260,154 (4,936)
query : 1 - 733 (733/733)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, mito 8.5, cyto 7.5, mito_nucl 6.83333,
cyto_nucl 6.33333, nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000658725_02 (
NR_033253
)
(G antigen family D member 2 isoform a.)
genome : 52,255,219 - 52,260,154 (4,936)
query : 1 - 733 (733/733)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, mito 8.5, cyto 7.5, mito_nucl 6.83333,
cyto_nucl 6.33333, nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000658726_02 (
NR_033254
)
(G antigen family D member 2 isoform a.)
genome : 52,255,219 - 52,260,154 (4,936)
query : 1 - 733 (733/733)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, mito 8.5, cyto 7.5, mito_nucl 6.83333,
cyto_nucl 6.33333, nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000658729_02 (
NR_033257
)
(G antigen family D member 2 isoform a.)
genome : 52,255,219 - 52,260,154 (4,936)
query : 1 - 733 (733/733)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, mito 8.5, cyto 7.5, mito_nucl 6.83333,
cyto_nucl 6.33333, nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000130896_01 (
ENST00000338266
)
(G antigen family D member 2 isoform a.)
genome : 52,255,219 - 52,259,992 (4,774)
query : 1 - 571 (571/571)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, mito 8.5, cyto 7.5, mito_nucl 6.83333,
cyto_nucl 6.33333, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000356852_01 (
ENST00000375572
)
(G antigen family D member 2 isoform a.)
genome : 52,255,219 - 52,259,992 (4,774)
query : 1 - 571 (571/571)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, mito 8.5, cyto 7.5, mito_nucl 6.83333,
cyto_nucl 6.33333, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000356875_01 (
ENST00000375595
)
(G antigen family D member 2 isoform a.)
genome : 52,255,219 - 52,259,992 (4,774)
query : 1 - 571 (571/571)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, mito 8.5, cyto 7.5, mito_nucl 6.83333,
cyto_nucl 6.33333, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000482836_01 (
ENST00000399805
)
(G antigen family D member 2 isoform d.)
genome : 52,255,219 - 52,258,669 (3,451)
query : 1 - 350 (350/350)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 11.5, mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000536013_02 (
ENST00000438079
)
(G antigen family D member 2 isoform d.)
genome : 52,255,219 - 52,258,669 (3,451)
query : 1 - 350 (350/350)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 11.5, mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000539351_02 (
ENST00000441417
)
(G antigen family D member 2 isoform d.)
genome : 52,255,219 - 52,258,669 (3,451)
query : 1 - 350 (350/350)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 11.5, mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000544032_02 (
ENST00000446098
)
(G antigen family D member 2 isoform d.)
genome : 52,255,219 - 52,258,669 (3,451)
query : 1 - 350 (350/350)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 11.5, mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000568473_02 (
ENST00000463689
)
(Similar to G antigen family D member 2; Cancer/testis antigen 12.1; CT12.1; Protein XAGE-1;)
genome : 52,255,219 - 52,258,167 (2,949)
query : 1 - 359 (359/359)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
InterPro :
IPR008625 : GAGE
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 11, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000582861_02 (
ENST00000478767
)
(Similar to G antigen family D member 2; Cancer/testis antigen 12.1; CT12.1; Protein XAGE-1;)
genome : 52,255,219 - 52,258,167 (2,949)
query : 1 - 359 (359/359)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
InterPro :
IPR008625 : GAGE
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 11, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000597449_02 (
ENST00000494039
)
(Similar to G antigen family D member 2; Cancer/testis antigen 12.1; CT12.1; Protein XAGE-1;)
genome : 52,255,219 - 52,258,167 (2,949)
query : 1 - 359 (359/359)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
InterPro :
IPR008625 : GAGE
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 11, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000597872_02 (
ENST00000494476
)
(Similar to G antigen family D member 2; Cancer/testis antigen 12.1; CT12.1; Protein XAGE-1;)
genome : 52,255,219 - 52,258,167 (2,949)
query : 1 - 359 (359/359)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
InterPro :
IPR008625 : GAGE
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 11, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000599780_02 (
ENST00000496463
)
(Similar to G antigen family D member 2; Cancer/testis antigen 12.1; CT12.1; Protein XAGE-1;)
genome : 52,255,219 - 52,258,167 (2,949)
query : 1 - 359 (359/359)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
InterPro :
IPR008625 : GAGE
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 11, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000617461_01 (
ENST00000518075
)
(G antigen family D member 2 isoform a.)
genome : 52,255,222 - 52,263,945 (8,724)
query : 1 - 472 (472/472)
4 exons
identity = 0.992
3'(1.000;1.000;1.000;0.960)5'
coverage = 1.000
InterPro :
IPR008625 : GAGE
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 10, cyto_nucl 5, E.R._mito 5,
mito_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000527306_02 (
ENST00000429372
)
(G antigen family D member 2 isoform a.)
genome : 52,255,222 - 52,260,363 (5,142)
query : 1 - 619 (619/619)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR008625 : GAGE
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito_nucl 5.5, nucl 5, cyto 5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000535883_02 (
ENST00000437949
)
(G antigen family D member 2 isoform a.)
genome : 52,255,222 - 52,260,363 (5,142)
query : 1 - 619 (619/619)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR008625 : GAGE
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito_nucl 5.5, nucl 5, cyto 5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000356843_01 (
ENST00000375563
)
(G antigen family D member 2 isoform a.)
genome : 52,255,222 - 52,260,210 (4,989)
query : 1 - 786 (786/786)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11, cyto 9.5, extr 9, nucl 7.5, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000356847_01 (
ENST00000375567
)
(G antigen family D member 2 isoform d.)
genome : 52,255,222 - 52,260,210 (4,989)
query : 1 - 482 (482/482)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
This sequence is too short.
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000356892_01 (
ENST00000375612
)
(G antigen family D member 2 isoform a.)
genome : 52,255,222 - 52,260,210 (4,989)
query : 1 - 786 (786/786)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11, cyto 9.5, extr 9, nucl 7.5, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000356893_01 (
ENST00000375613
)
(G antigen family D member 2 isoform d.)
genome : 52,255,222 - 52,260,210 (4,989)
query : 1 - 482 (482/482)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
This sequence is too short.
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000100019_02
(
BT007099
)
(G antigen family D member 2 isoform a.)
genome : 52,257,918 - 52,258,669 (752)
query : 1 - 225 (225/246)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.915
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 10, cyto_nucl 5, E.R._mito 5,
mito_pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000605848_02 (
ENST00000505738
)
(Similar to G antigen family D member 2; Cancer/testis antigen 12.1; CT12.1; Protein XAGE-1;)
genome : 52,258,310 - 52,260,248 (1,939)
query : 1 - 533 (533/533)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12.5, mito_nucl 12.5, nucl 11.5, cyto 3, plas 2,
golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
HIX0020425
HIT000618929_02 (
ENST00000519579
)
(Similar to G antigen family D member 2; Cancer/testis antigen 12.1; CT12.1; Protein XAGE-1;)
genome : 52,258,310 - 52,260,248 (1,939)
query : 1 - 533 (533/533)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12.5, mito_nucl 12.5, nucl 11.5, cyto 3, plas 2,
golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020425)
BX088602.5
52251580-52267579 F +
NCBI
MLT1B
L2c
L1MC
L2c
LTR75B
MER113
MER21B
AT_rich
AluJo
L1M5
MIR3
AluSz6
AT_rich
AluSc
AluJr
MER66C
Cheshire
L1MCc
L1PA13
GA-rich
(T)n
AT_rich
L1MCc
AluSx
L1MCc
L1MA2