bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0035058
HIT000486370 (
NR_003670
)
(Putative keratinocyte growth factor-like protein 2; KGF-like protein 2;)
genome : 41,958,802 - 42,019,584 (60,783)
query : 1 - 4,707 (4,707/4,723)
3 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, mito 11
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035058)
HIX0035058
HIT000331692
(
AY098594
)
Representative transcript
(Fibroblast growth factor 7; FGF-7; Heparin-binding growth factor 7; HBGF-7; Keratinocyte growth factor; Precursor;)
genome : 41,959,736 - 42,019,477 (59,742)
query : 1 - 3,665 (3,665/3,665)
3 exons
identity = 0.995
3'(0.987)5'
coverage = 1.000
InterPro :
IPR002209 : Fibroblast growth factor family
IPR008996 : Cytokine, IL-1-like
IPR028142 : IL-1 family/FGF family
IPR028247 : Fibroblast growth factor 7
GO :
0005102 : Molecular Function : receptor binding
0005104 : Molecular Function : fibroblast growth factor receptor binding
0005576 : Cellular Component : extracellular region
0008083 : Molecular Function : growth factor activity
0008543 : Biological Process : fibroblast growth factor receptor signaling pathway
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, mito 12, cyto_nucl 9.5, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035058)
Ortholog candidate ( ->
Evola
)
Oryzias
sp. (Medaka) : ENSORLT00000002930
HIX0035058
HIT000092108
(
BC030269
)
(Putative keratinocyte growth factor-like protein 2; KGF-like protein 2;)
genome : 41,961,616 - 42,019,477 (57,862)
query : 1 - 1,785 (1,785/1,867)
3 exons
identity = 0.994
3'(0.989)5'
coverage = 1.000
InterPro :
IPR002209 : Fibroblast growth factor family
IPR008996 : Cytokine, IL-1-like
IPR028142 : IL-1 family/FGF family
IPR028247 : Fibroblast growth factor 7
GO :
0005102 : Molecular Function : receptor binding
0005104 : Molecular Function : fibroblast growth factor receptor binding
0005576 : Cellular Component : extracellular region
0008083 : Molecular Function : growth factor activity
0008543 : Biological Process : fibroblast growth factor receptor signaling pathway
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 10.5, mito 10, nucl 5.5,
mito_pero 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035058)
HIX0035058
HIT000334145
(
BC067893
)
(Putative keratinocyte growth factor-like protein 2; KGF-like protein 2;)
genome : 41,961,561 - 42,019,218 (57,658)
query : 1 - 1,580 (1,580/1,595)
3 exons
identity = 0.996
3'(0.993)5'
coverage = 0.999
InterPro :
IPR002209 : Fibroblast growth factor family
IPR008996 : Cytokine, IL-1-like
IPR028142 : IL-1 family/FGF family
IPR028247 : Fibroblast growth factor 7
GO :
0005102 : Molecular Function : receptor binding
0005104 : Molecular Function : fibroblast growth factor receptor binding
0005576 : Cellular Component : extracellular region
0008083 : Molecular Function : growth factor activity
0008543 : Biological Process : fibroblast growth factor receptor signaling pathway
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, mito 12, cyto_nucl 9.5, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035058)
HIX0035058
HIT000552579 (
ENST00000454645
)
(Putative keratinocyte growth factor-like protein 2; KGF-like protein 2;)
genome : 41,961,615 - 42,019,580 (57,966)
query : 1 - 1,890 (1,890/1,890)
3 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, mito 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035058)
HIX0035058
HIT000502134
(
BC143690
)
(Conserved hypothetical protein.)
genome : 41,963,886 - 42,019,486 (55,601)
query : 1 - 647 (647/647)
3 exons
identity = 0.989
3'(1.000;0.987)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, plas 10, E.R. 5, extr_plas 5, cysk_plas 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035058)
HIX0169268
HIT000525470_01 (
ENST00000427536
)
(Hypothetical protein.)
genome : 42,000,060 - 42,000,368 (309)
query : 1 - 309 (309/309)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 11.3333, cyto 10, nucl 7.5,
cyto_pero 6.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169268)
HIX0218722
HIT000726532_01 (
NR_046203
)
(Hypothetical short protein.)
genome : 42,004,536 - 42,008,563 (4,028)
query : 1 - 523 (523/547)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 11
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218722)
HIX0035058
HIT000423020_03
(
AK290223
)
(Hypothetical protein.)
genome : 42,018,871 - 42,019,492 (622)
query : 1 - 622 (622/622)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 16, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035058)
HIX0035058
HIT000528236_01 (
ENST00000430302
)
(Hypothetical protein.)
genome : 42,018,905 - 42,020,409 (1,505)
query : 1 - 781 (781/781)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 16, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035058)
HIX0169107
HIT000425439_03
(
AK292642
)
(Hypothetical protein.)
genome : 42,018,944 - 42,019,683 (740)
query : 1 - 625 (625/625)
2 exons
identity = 0.995
5'(0.993;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169107)
HIX0169107
HIT000358798_03 (
ENST00000377518
)
(Hypothetical protein.)
genome : 42,018,958 - 42,021,594 (2,637)
query : 1 - 2,522 (2,522/2,541)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169107)
HIX0169107
HIT000527752_01 (
ENST00000429818
)
(Hypothetical protein.)
genome : 42,018,961 - 42,021,279 (2,319)
query : 1 - 1,480 (1,480/1,480)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 13.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169107)
HIX0169107
HIT000266078_03
(
BC084570
)
Representative transcript
(Hypothetical protein.)
genome : 42,018,961 - 42,020,413 (1,453)
query : 1 - 1,338 (1,338/1,367)
2 exons
identity = 0.996
5'(0.993;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169107)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : ENSPTRT00000038794
HIX0035058
HIT000510565_01 (
ENST00000412631
)
(Hypothetical short protein.)
genome : 42,019,615 - 42,020,413 (799)
query : 1 - 256 (256/256)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 17, extr 6, mito 4, E.R._mito 3.5, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035058)
HIX0209129
HIT000615721_02 (
ENST00000516318
)
(Non-protein coding transcript.)
genome : 42,037,464 - 42,037,558 (95)
query : 1 - 95 (95/95)
1 exon
identity = 0.968
5'(0.968)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209129)
HIX0209129
HIT000615727_02 (
ENST00000516324
)
(Non-protein coding transcript.)
genome : 42,037,464 - 42,037,558 (95)
query : 1 - 95 (95/95)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209129)
HIX0209129
HIT000615793_01 (
ENST00000516390
)
(Non-protein coding transcript.)
genome : 42,037,464 - 42,037,558 (95)
query : 1 - 95 (95/95)
1 exon
identity = 0.968
5'(0.968)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209129)
HIX0209129
HIT000616318_02 (
ENST00000516915
)
(Non-protein coding transcript.)
genome : 42,037,464 - 42,037,558 (95)
query : 1 - 95 (95/95)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209129)
HIX0209129
HIT000616472_02 (
ENST00000517069
)
(Non-protein coding transcript.)
genome : 42,037,464 - 42,037,558 (95)
query : 1 - 95 (95/95)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209129)
HIX0169178
HIT000512852_01 (
ENST00000414918
)
(Hypothetical protein.)
genome : 42,037,567 - 42,037,912 (346)
query : 1 - 346 (346/346)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, nucl 4, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169178)
HIX0169178
HIT000534271_01 (
ENST00000436337
)
(Hypothetical protein.)
genome : 42,037,568 - 42,037,913 (346)
query : 1 - 346 (346/346)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, nucl 4, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169178)
HIX0169178
HIT000546760_01 (
ENST00000448826
)
(Hypothetical protein.)
genome : 42,037,568 - 42,037,913 (346)
query : 1 - 346 (346/346)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, nucl 4, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169178)
HIX0169178
HIT000544330_01 (
ENST00000446396
)
(Hypothetical protein.)
genome : 42,037,609 - 42,037,915 (307)
query : 1 - 307 (307/307)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, nucl 4, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169178)
HIX0169178
HIT000510362_01 (
ENST00000412428
)
(Hypothetical protein.)
genome : 42,037,617 - 42,037,914 (298)
query : 1 - 298 (298/298)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, nucl 4, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169178)
HIX0169081
HIT000018591_03
(
AK093724
)
Representative transcript
(Hypothetical protein.)
genome : 42,043,162 - 42,045,804 (2,643)
query : 1 - 2,644 (2,644/2,644)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169081)
HIX0169081
HIT000607898_03 (
ENST00000507933
)
(Hypothetical short protein.)
genome : 42,044,205 - 42,045,593 (1,389)
query : 2 - 491 (490/491)
2 exons
identity = 0.976
5'(0.979;0.960)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 8, nucl 7, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169081)
HIX0169081
HIT000546425_01 (
ENST00000448491
)
(Hypothetical short protein.)
genome : 42,044,205 - 42,045,598 (1,394)
query : 1 - 495 (495/495)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 7, cyto_nucl 7, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169081)
HIX0169081
HIT000613735_03 (
ENST00000514222
)
(Hypothetical short protein.)
genome : 42,044,449 - 42,045,937 (1,489)
query : 1 - 680 (680/680)
3 exons
identity = 0.966
5'(0.979;0.956;0.964)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169081)
HIX0169081
HIT000536006_01 (
ENST00000438072
)
(Hypothetical short protein.)
genome : 42,044,449 - 42,045,800 (1,352)
query : 1 - 543 (543/543)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169081)
HIX0209225
HIT000527456 (
ENST00000429522
)
(Ribosomal protein L7A/L8 family protein.)
genome : 42,128,839 - 42,129,419 (581)
query : 1 - 581 (581/581)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 13, extr 4, mito 4, nucl 3,
mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209225)
HIX0035101
HIT000096911
(
BC041869
)
Representative transcript
(Conserved hypothetical protein.)
genome : 42,152,662 - 42,156,536 (3,875)
query : 1 - 3,875 (3,875/3,890)
1 exon
identity = 0.981
5'(0.981)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 13, extr_plas 9, mito 7, extr 3, E.R. 3,
cyto 2.5, cyto_nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035101)
HIX0035091
HIT000095663
(
BC039395
)
Representative transcript
(Hypothetical short protein.)
genome : 42,159,577 - 42,161,055 (1,479)
query : 1 - 1,479 (1,479/1,496)
1 exon
identity = 0.993
3'(0.993)5'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 13, extr 8, pero 5, mito 4, E.R._mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035091)
HIX0169099
HIT000512231 (
ENST00000414297
)
(Conserved hypothetical protein.)
genome : 42,250,840 - 42,251,545 (706)
query : 1 - 706 (706/706)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 7, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169099)
HIX0218675
HIT000662171_01 (
ENST00000548131
)
(Non-protein coding transcript.)
genome : 42,264,178 - 42,264,220 (43)
query : 1 - 42 (42/42)
1 exon
identity = 0.977
3'(0.977)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218675)
HIX0169942
HIT000532057_01 (
ENST00000434123
)
(Hypothetical protein.)
genome : 42,266,980 - 42,267,558 (579)
query : 1 - 579 (579/579)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 13, plas 7, E.R._mito 7, mito_pero 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169942)
HIX0169826
HIT000523566 (
ENST00000425632
)
(Conserved hypothetical protein.)
genome : 42,275,939 - 42,298,165 (22,227)
query : 1 - 347 (347/347)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 8, nucl 5, mito 4, cyto_pero 4,
cyto_plas 4, cyto_golg 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169826)
HIX0169300
HIT000540083_01 (
ENST00000442149
)
(Hypothetical protein.)
genome : 42,276,765 - 42,277,236 (472)
query : 1 - 472 (472/472)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169300)
HIX0169693
HIT000515352_01 (
ENST00000417418
)
(GPCR, family 2, Ig-hepta receptor protein.)
genome : 42,312,410 - 42,316,345 (3,936)
query : 1 - 308 (308/308)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, nucl 6, cyto_nucl 5, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169693)
HIX0209135
HIT000522775 (
ENST00000424841
)
(MATH domain containing protein.)
genome : 42,332,815 - 42,338,938 (6,124)
query : 1 - 1,084 (1,084/1,084)
4 exons
identity = 0.992
3'(1.000;0.977;0.988;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, mito 4, nucl 2, E.R._mito 2, mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209135)
HIX0209135
HIT000635698_01 (
ENST00000536653
)
(MATH domain containing protein.)
genome : 42,338,591 - 42,338,869 (279)
query : 1 - 279 (279/279)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 9.5, cyto 8.5, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209135)
HIX0209135
HIT000645394_01 (
ENST00000546349
)
(MATH domain containing protein.)
genome : 42,338,591 - 42,338,869 (279)
query : 1 - 279 (279/279)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 9.5, cyto 8.5, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209135)
HIX0169461
HIT000447148_05
(
DQ580617
)
Representative transcript
(Non-protein coding transcript.)
genome : 42,357,835 - 42,357,866 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169461)
HIX0170181
HIT000548454 (
ENST00000450520
)
(Conserved hypothetical protein.)
genome : 42,363,048 - 42,367,092 (4,045)
query : 1 - 3,200 (3,200/3,200)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 13.5, cyto_mito 10.3333, cyto_nucl 10, nucl 9.5,
cyto 5, cyto_pero 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170181)
HIX0169477
HIT000447729_07
(
DQ581198
)
Representative transcript
(Non-protein coding transcript.)
genome : 42,363,937 - 42,363,967 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169477)
HIX0034914
HIT000025389_05
(
AL136793
)
Representative transcript
(Ankyrin repeat domain-containing protein 20A1.)
genome : 42,368,303 - 42,411,410 (43,108)
query : 2 - 3,518 (3,517/3,527)
15 exons
identity = 0.995
5'(0.997;1.000;0.994;0.991;1.000;1.000;1.000;
1.000;1.000;1.000;0.986;1.000;1.000;1.000;
0.993)3'
coverage = 1.000
InterPro :
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 16.5, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : XR_012725
HIX0034914
HIT000316887 (
NM_001012421
)
(Ankyrin repeat domain-containing protein 20A1.)
genome : 42,368,303 - 42,411,410 (43,108)
query : 1 - 3,511 (3,511/3,511)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 16.5, cyto 7.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0034914
HIT000358881 (
ENST00000377601
)
(Ankyrin repeat domain-containing protein 20A1.)
genome : 42,368,303 - 42,411,410 (43,108)
query : 1 - 3,511 (3,511/3,511)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 16.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0034914
HIT000501558_01
(
BC140809
)
(Ankyrin repeat domain-containing protein 20A1.)
genome : 42,368,337 - 42,410,649 (42,313)
query : 1 - 2,713 (2,713/2,713)
15 exons
identity = 0.999
5'(0.993;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.999)3'
coverage = 1.000
InterPro :
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 16.5, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0034914
HIT000503524_01
(
BC171793
)
(Ankyrin repeat domain-containing protein 20A1.)
genome : 42,368,337 - 42,410,641 (42,305)
query : 1 - 2,705 (2,705/2,705)
15 exons
identity = 0.999
5'(0.993;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.999)3'
coverage = 1.000
InterPro :
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 16.5, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0034914
HIT000441310_08
(
DQ574779
)
(Non-protein coding transcript.)
genome : 42,368,463 - 42,368,492 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0034914
HIT000443059_05
(
DQ576528
)
(Non-protein coding transcript.)
genome : 42,371,975 - 42,372,006 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0034914
HIT000454119_08
(
DQ587588
)
(Non-protein coding transcript.)
genome : 42,372,326 - 42,372,355 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0034914
HIT000581296_02 (
ENST00000477139
)
(Ankyrin repeat domain-containing protein 20A1.)
genome : 42,375,428 - 42,403,797 (28,370)
query : 1 - 747 (747/747)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 13, nucl 6.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0034914
HIT000577660_03 (
ENST00000473324
)
(Ankyrin repeat domain-containing protein 20A1.)
genome : 42,402,329 - 42,408,214 (5,886)
query : 1 - 401 (401/401)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 15.5, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0034914
HIT000695229_03 (
ENST00000583348
)
(Ankyrin repeat domain-containing protein 20B; Ankyrin repeat domain-containing protein 20A pseudogene;)
genome : 42,408,160 - 42,409,629 (1,470)
query : 1 - 300 (300/300)
2 exons
identity = 0.967
5'(0.972;0.959)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, mito 6, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0034914
HIT000137168 (
ENST00000344538
)
(Ankyrin repeat domain-containing protein 20A1.)
genome : 42,409,978 - 42,427,467 (17,490)
query : 1 - 1,065 (1,065/1,065)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, nucl 8, extr 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0034914
HIT000701989_02 (
ENST00000590154
)
(Ankyrin repeat domain-containing protein 20A1.)
genome : 42,409,989 - 42,419,103 (9,115)
query : 1 - 794 (794/794)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 13, extr 6, nucl 3, extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0034914
HIT000704777_02 (
ENST00000592959
)
(Ankyrin repeat domain-containing protein 20A1.)
genome : 42,409,989 - 42,419,103 (9,115)
query : 1 - 794 (794/794)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 13, extr 6, nucl 3, extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0034914
HIT000519620_01 (
ENST00000421686
)
(Putative uncharacterized protein ENSP00000344348;)
genome : 42,410,363 - 42,474,239 (63,877)
query : 1 - 1,761 (1,761/1,761)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 7, mito 5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0034914
HIT000515637 (
ENST00000417703
)
(Putative uncharacterized protein ENSP00000344348;)
genome : 42,410,363 - 42,436,936 (26,574)
query : 1 - 1,456 (1,456/1,456)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.996;1.000;
1.000;0.992;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 7, mito 5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0034914
HIT000700408_02 (
ENST00000588568
)
(Putative uncharacterized protein ENSP00000344348;)
genome : 42,419,017 - 42,429,602 (10,586)
query : 1 - 536 (536/536)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, extr 4, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0034914
HIT000459961_03
(
DQ593430
)
(Non-protein coding transcript.)
genome : 42,435,180 - 42,435,210 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0034914
HIT000447551_06
(
DQ581020
)
(Non-protein coding transcript.)
genome : 42,435,222 - 42,435,251 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0169486
HIT000450019_09
(
DQ583488
)
Representative transcript
(Non-protein coding transcript.)
genome : 42,435,431 - 42,435,458 (28)
query : 3 - 30 (28/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.933
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169486)
HIX0169387
HIT000437081_06
(
DQ570550
)
Representative transcript
(Non-protein coding transcript.)
genome : 42,435,535 - 42,435,565 (31)
query : 1 - 31 (31/32)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.969
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169387)
HIX0169237
HIT000518242_01 (
ENST00000420308
)
(Hypothetical protein.)
genome : 42,436,293 - 42,436,520 (228)
query : 1 - 228 (228/228)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 5.5, cyto_nucl 5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169237)
HIX0169237
HIT000518661_01 (
ENST00000420727
)
(Hypothetical protein.)
genome : 42,436,293 - 42,436,520 (228)
query : 1 - 228 (228/228)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 5.5, cyto_nucl 5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169237)
HIX0169526
HIT000455894_08
(
DQ589363
)
Representative transcript
(Non-protein coding transcript.)
genome : 42,436,765 - 42,436,796 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169526)
HIX0034914
HIT000437470_06
(
DQ570939
)
(Non-protein coding transcript.)
genome : 42,436,839 - 42,436,870 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0034914
HIT000463706_06
(
DQ597175
)
(Non-protein coding transcript.)
genome : 42,436,840 - 42,436,869 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0034914
HIT000454666_03
(
DQ588135
)
(Non-protein coding transcript.)
genome : 42,436,869 - 42,436,898 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0034914
HIT000446503_08
(
DQ579972
)
(Non-protein coding transcript.)
genome : 42,436,921 - 42,436,952 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0169151
HIT000553054 (
ENST00000455120
)
(Conserved hypothetical protein.)
genome : 42,438,100 - 42,438,973 (874)
query : 1 - 874 (874/874)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 14.5, extr 8, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169151)
HIX0169151
HIT000442918_07
(
DQ576387
)
Representative transcript
(Non-protein coding transcript.)
genome : 42,438,265 - 42,438,294 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169151)
HIX0169568
HIT000467969_08
(
DQ601438
)
Representative transcript
(Non-protein coding transcript.)
genome : 42,441,893 - 42,441,922 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169568)
HIX0169548
HIT000463589_08
(
DQ597058
)
Representative transcript
(Non-protein coding transcript.)
genome : 42,445,406 - 42,445,435 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169548)
HIX0169514
HIT000454199_06
(
DQ587668
)
Representative transcript
(Non-protein coding transcript.)
genome : 42,449,880 - 42,449,910 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169514)
HIX0169411
HIT000442693_08
(
DQ576162
)
Representative transcript
(Non-protein coding transcript.)
genome : 42,450,919 - 42,450,948 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169411)
HIX0169569
HIT000467969_09
(
DQ601438
)
Representative transcript
(Non-protein coding transcript.)
genome : 42,451,600 - 42,451,629 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169569)
HIX0169484
HIT000449544_03
(
DQ583013
)
Representative transcript
(Non-protein coding transcript.)
genome : 42,451,636 - 42,451,665 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169484)
HIX0169505
HIT000452885_03
(
DQ586354
)
Representative transcript
(Non-protein coding transcript.)
genome : 42,452,466 - 42,452,495 (30)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
5'(0.967)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169505)
HIX0169549
HIT000463589_09
(
DQ597058
)
Representative transcript
(Non-protein coding transcript.)
genome : 42,455,505 - 42,455,534 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169549)
HIX0169515
HIT000454199_07
(
DQ587668
)
Representative transcript
(Non-protein coding transcript.)
genome : 42,456,086 - 42,456,116 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169515)
HIX0169412
HIT000442693_09
(
DQ576162
)
Representative transcript
(Non-protein coding transcript.)
genome : 42,457,124 - 42,457,153 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169412)
HIX0169523
HIT000454825_04
(
DQ588294
)
Representative transcript
(Non-protein coding transcript.)
genome : 42,464,838 - 42,464,867 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169523)
HIX0209207
HIT000460903_04
(
DQ594372
)
Representative transcript
(Non-protein coding transcript.)
genome : 42,466,215 - 42,466,243 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209207)
HIX0034914
HIT000045723_03
(
AK125850
)
(Leukotriene-B(4) omega-hydroxylase 2; EC=1.14.13.30; CYPIVF3; Cytochrome P450 4F3; Cytochrome P450-LTB-omega; Leukotriene-B(4) 20-monooxygenase 2;)
genome : 42,466,317 - 42,474,236 (7,920)
query : 1 - 4,238 (4,238/4,238)
4 exons
identity = 0.996
5'(0.996;1.000;0.988;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 8, cyto 4, mito_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0034914
HIT000553929 (
ENST00000455995
)
(Leukotriene-B(4) omega-hydroxylase 2; EC=1.14.13.30; CYPIVF3; Cytochrome P450 4F3; Cytochrome P450-LTB-omega; Leukotriene-B(4) 20-monooxygenase 2;)
genome : 42,466,317 - 42,474,236 (7,920)
query : 1 - 4,236 (4,236/4,236)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.14.13.30
KEGG pathway :
00590 : Arachidonic acid metabolism (26)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto_nucl 3, nucl 2.5, cyto 2.5, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0034914
HIT000446274_06
(
DQ579743
)
(Non-protein coding transcript.)
genome : 42,466,820 - 42,466,848 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0034914
HIT000464513_04
(
DQ597982
)
(Non-protein coding transcript.)
genome : 42,466,850 - 42,466,881 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0034914
HIT000453302_07
(
DQ586771
)
(Non-protein coding transcript.)
genome : 42,467,512 - 42,467,541 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0034914
HIT000461663_06
(
DQ595132
)
(Non-protein coding transcript.)
genome : 42,468,173 - 42,468,203 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0034914
HIT000261290_03
(
BC064148
)
(Leukotriene-B(4) omega-hydroxylase 2; EC=1.14.13.30; CYPIVF3; Cytochrome P450 4F3; Cytochrome P450-LTB-omega; Leukotriene-B(4) 20-monooxygenase 2;)
genome : 42,468,589 - 42,474,236 (5,648)
query : 1 - 1,541 (1,541/1,684)
5 exons
identity = 0.998
5'(1.000;0.992;1.000;1.000;0.997)3'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, cyto_nucl 10.5, nucl 8, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0034914
HIT000562944_01 (
NR_026759
)
(Leukotriene-B(4) omega-hydroxylase 2; EC=1.14.13.30; CYPIVF3; Cytochrome P450 4F3; Cytochrome P450-LTB-omega; Leukotriene-B(4) 20-monooxygenase 2;)
genome : 42,468,589 - 42,474,238 (5,650)
query : 1 - 1,543 (1,543/1,543)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, cyto_nucl 9.5, extr_plas 9.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0034914
HIT000703874_01 (
ENST00000592053
)
(Leukotriene-B(4) omega-hydroxylase 2; EC=1.14.13.30; CYPIVF3; Cytochrome P450 4F3; Cytochrome P450-LTB-omega; Leukotriene-B(4) 20-monooxygenase 2;)
genome : 42,468,589 - 42,474,236 (5,648)
query : 1 - 1,541 (1,541/1,541)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, cyto_nucl 9.5, extr_plas 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0034914
HIT000444696_06
(
DQ578165
)
(Non-protein coding transcript.)
genome : 42,468,618 - 42,468,647 (30)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
5'(0.967)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0034914
HIT000702089_01 (
ENST00000590254
)
(Hypothetical protein.)
genome : 42,468,743 - 42,470,655 (1,913)
query : 1 - 663 (663/663)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto_nucl 8, cyto 6.5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0034914
HIT000700057_01 (
ENST00000588217
)
(Cytochrome P450 4F12; EC=1.14.14.1; CYPIVF12;)
genome : 42,468,743 - 42,470,652 (1,910)
query : 1 - 653 (653/653)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 7.83333, nucl 7.5, cyto 5,
cyto_pero 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0034914
HIT000697274_01 (
ENST00000585417
)
(Hypothetical protein.)
genome : 42,468,743 - 42,470,577 (1,835)
query : 1 - 675 (675/675)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 9, nucl 6.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0034914
HIT000698687_01 (
ENST00000586842
)
(Hypothetical protein.)
genome : 42,468,743 - 42,470,547 (1,805)
query : 1 - 789 (789/789)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 12, cyto_nucl 11.5, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0034914
HIT000698024_01 (
ENST00000586172
)
(Hypothetical protein.)
genome : 42,468,743 - 42,469,819 (1,077)
query : 1 - 709 (709/709)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 8.5, nucl 7, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0218532
HIT000551932_01 (
ENST00000453998
)
(Hypothetical protein.)
genome : 42,469,024 - 42,474,153 (5,130)
query : 1 - 783 (783/783)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 9, cyto 6.5, cyto_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218532)
HIX0034914
HIT000455330_03
(
DQ588799
)
(Non-protein coding transcript.)
genome : 42,469,088 - 42,469,117 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0034914
HIT000028261
(
AL833349
)
(Conserved hypothetical protein.)
genome : 42,469,548 - 42,474,238 (4,691)
query : 1 - 4,691 (4,691/4,732)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 11, cyto_nucl 10, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0034914
HIT000704691 (
ENST00000592873
)
(Conserved hypothetical protein.)
genome : 42,469,548 - 42,474,239 (4,692)
query : 1 - 4,692 (4,692/4,692)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 10, cyto_nucl 9.5, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0034914
HIT000679729_02 (
ENST00000566698
)
(Hypothetical protein.)
genome : 42,469,619 - 42,469,960 (342)
query : 2 - 343 (342/343)
1 exon
identity = 0.950
5'(0.950)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 11.5, cyto_nucl 11, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0034914
HIT000705034 (
ENST00000593216
)
(Leukotriene-B(4) omega-hydroxylase 2; EC=1.14.13.30; CYPIVF3; Cytochrome P450 4F3; Cytochrome P450-LTB-omega; Leukotriene-B(4) 20-monooxygenase 2;)
genome : 42,469,685 - 42,470,994 (1,310)
query : 1 - 759 (759/759)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.14.13.30
KEGG pathway :
00590 : Arachidonic acid metabolism (26)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, extr 8, cyto_nucl 4.66667, nucl 4.5,
cyto_pero 3.83333, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0034914
HIT000441058_06
(
DQ574527
)
(Non-protein coding transcript.)
genome : 42,469,697 - 42,469,727 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0034914
HIT000698123_01 (
ENST00000586273
)
(Hypothetical protein.)
genome : 42,469,884 - 42,474,075 (4,192)
query : 1 - 798 (798/798)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 12, cyto_nucl 3.66667, nucl 3.5,
cyto_pero 2.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0034914
HIT000704865_01 (
ENST00000593047
)
(Cytochrome P450 4F11; EC=1.14.14.1; CYPIVF11;)
genome : 42,469,953 - 42,474,147 (4,195)
query : 1 - 767 (767/767)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, extr 10, nucl 4, cyto_pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0034914
HIT000703427_01 (
ENST00000591605
)
(Cytochrome P450 4F11; EC=1.14.14.1; CYPIVF11;)
genome : 42,470,244 - 42,474,045 (3,802)
query : 1 - 743 (743/743)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.14.14.1
KEGG pathway :
00071 : Fatty acid metabolism (28)
00140 : Steroid hormone biosynthesis (37)
00232 : Caffeine metabolism (9)
00380 : Tryptophan metabolism (54)
00590 : Arachidonic acid metabolism (26)
00591 : Linoleic acid metabolism (11)
00627 : Aminobenzoate degradation (45)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
00983 : Drug metabolism - other enzymes (20)
01100 : Metabolic pathways (1346)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, extr 10, nucl 4, cyto_pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0034914
HIT000702689_01 (
ENST00000590863
)
(Hypothetical protein.)
genome : 42,470,339 - 42,474,152 (3,814)
query : 1 - 789 (789/789)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 12, cyto_nucl 3.66667, nucl 3.5,
cyto_pero 2.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0218532
HIT000544805_01 (
ENST00000446871
)
(Cytochrome P450 family protein.)
genome : 42,470,453 - 42,471,489 (1,037)
query : 1 - 520 (520/520)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, extr 6, nucl 3, extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218532)
HIX0034914
HIT000700952_01 (
ENST00000589112
)
(Hypothetical protein.)
genome : 42,470,500 - 42,474,129 (3,630)
query : 1 - 768 (768/768)
4 exons
identity = 0.993
5'(1.000;1.000;1.000;0.975)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 12, cyto_nucl 3.66667, nucl 3.5,
cyto_pero 2.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0034914
HIT000019793
(
AK094938
)
(Conserved hypothetical protein.)
genome : 42,471,398 - 42,474,237 (2,840)
query : 1 - 2,841 (2,841/2,841)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0034914
HIT000018310_03
(
AK093443
)
(Activating molecule in BECN1-regulated autophagy protein 1 isoform 1.)
genome : 42,472,334 - 42,474,236 (1,903)
query : 1 - 1,903 (1,903/1,903)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034914)
HIX0169672
HIT000513958_01 (
ENST00000416024
)
(Hypothetical protein.)
genome : 42,478,013 - 42,478,478 (466)
query : 1 - 466 (466/466)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, mito 6, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169672)
HIX0170066
HIT000541470 (
ENST00000443536
)
(Smooth muscle protein/calponin family protein.)
genome : 42,491,162 - 42,492,070 (909)
query : 1 - 909 (909/909)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 13, nucl 5.5, extr 5, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170066)
HIX0170211
HIT000522912_02 (
ENST00000424978
)
(Hypothetical protein.)
genome : 42,493,615 - 42,494,804 (1,190)
query : 1 - 1,190 (1,190/1,190)
1 exon
identity = 0.977
5'(0.977)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 10, cyto_nucl 8.5, nucl 5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170211)
HIX0170211
HIT000678914_02 (
ENST00000565856
)
(Hypothetical protein.)
genome : 42,493,615 - 42,494,803 (1,189)
query : 1 - 1,189 (1,189/1,189)
1 exon
identity = 0.977
5'(0.977)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 10, cyto_nucl 8.5, nucl 5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170211)
HIX0170211
HIT000550992_01 (
ENST00000453058
)
(Hypothetical protein.)
genome : 42,493,617 - 42,494,809 (1,193)
query : 1 - 1,193 (1,193/1,193)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 9, cyto_nucl 7, extr_plas 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170211)
HIX0169378
HIT000393241_03
(
DQ786188
)
Representative transcript
(Hypothetical short protein.)
genome : 42,497,004 - 42,498,676 (1,673)
query : 6 - 641 (636/664)
3 exons
identity = 0.997
5'(1.000;1.000;0.995)3'
coverage = 0.992
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 8.33333, cyto 7, nucl 6.5,
cyto_pero 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169378)
HIX0008070
HIT000019499
(
AK094644
)
Representative transcript
(Conserved hypothetical protein.)
genome : 42,500,527 - 42,506,814 (6,288)
query : 3 - 2,252 (2,250/2,253)
2 exons
identity = 0.997
5'(0.997;0.997)3'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 11, pero 6, extr_plas 6, cyto 5, mito_pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008070)
HIX0058617
HIT000022493_01
(
AK097639
)
Representative transcript
(COBW domain-containing protein 5.)
genome : 42,669,321 - 42,714,593 (45,273)
query : 1 - 1,881 (1,881/1,881)
15 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.993;1.000;0.989;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR011629 : Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_plas 13.1667, cyto_nucl 13, extr 3,
nucl 2, mito 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058617)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AF353305
Gallus
sp. (Chicken) : AJ720230
Mus
sp. (Mouse) : AK132291
Danio
sp. (Zebrafish) : BC065429
Tetraodon
sp. (Tetraodon) : CR677861
Monodelphis
sp. (Opossum) : ENSMODT00000037484
Takifugu
sp. (Fugu) : SINFRUT00000170943
Equus
sp. (Horse) : XM_001490027
HIX0058617
HIT000565809_02 (
ENST00000460896
)
(COBW domain-containing protein 5.)
genome : 42,669,321 - 42,714,593 (45,273)
query : 1 - 1,881 (1,881/1,881)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_plas 13.1667, cyto_nucl 13, extr 3,
nucl 2, mito 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058617)
HIX0058617
HIT000580975_02 (
ENST00000476797
)
(COBW domain-containing protein 5.)
genome : 42,669,321 - 42,714,593 (45,273)
query : 1 - 1,881 (1,881/1,881)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_plas 13.1667, cyto_nucl 13, extr 3,
nucl 2, mito 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058617)
HIX0058617
HIT000358671_03 (
ENST00000377391
)
(COBW domain-containing protein 5.)
genome : 42,671,887 - 42,714,962 (43,076)
query : 1 - 1,184 (1,184/1,184)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 14, nucl 6.5, cysk 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058617)
HIX0058617
HIT000554454_01 (
ENST00000456520
)
(COBW domain-containing protein 5.)
genome : 42,671,887 - 42,714,961 (43,075)
query : 1 - 1,126 (1,126/1,126)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 15, nucl 6.5, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058617)
HIX0058617
HIT000590143_02 (
ENST00000486387
)
(COBW domain-containing protein 5.)
genome : 42,671,887 - 42,714,592 (42,706)
query : 1 - 1,922 (1,922/1,922)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, cyto_nucl 15.5, nucl 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058617)
HIX0058617
HIT000572391_02 (
ENST00000467791
)
(COBW domain-containing protein 5.)
genome : 42,671,887 - 42,689,878 (17,992)
query : 1 - 563 (563/563)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 6, nucl 6, mito 2, cysk 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058617)
HIX0058617
HIT000599689_02 (
ENST00000496364
)
(COBW domain-containing protein 5.)
genome : 42,671,887 - 42,689,878 (17,992)
query : 1 - 563 (563/563)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 6, nucl 6, mito 2, cysk 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058617)
HIX0058617
HIT000572776_02 (
ENST00000468198
)
(COBW domain-containing protein 5.)
genome : 42,671,887 - 42,685,831 (13,945)
query : 1 - 2,175 (2,175/2,187)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 19, cyto 18, cyto_plas 12.1667, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058617)
HIX0058617
HIT000363714_04 (
ENST00000382436
)
(COBW domain-containing protein 3.)
genome : 42,671,915 - 42,714,945 (43,031)
query : 1 - 1,227 (1,227/1,227)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_plas 13.1667, cyto_nucl 13, extr 3,
nucl 2, mito 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058617)
HIX0058617
HIT000593027_02 (
ENST00000489423
)
(COBW domain-containing protein 3.)
genome : 42,671,915 - 42,682,133 (10,219)
query : 1 - 1,168 (1,168/1,168)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 17.5, cyto_plas 13.6667, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058617)
HIX0058617
HIT000598975_02 (
ENST00000495615
)
(COBW domain-containing protein 3.)
genome : 42,674,306 - 42,682,028 (7,723)
query : 1 - 993 (993/993)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 17.5, cyto_plas 13.6667, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058617)
HIX0058617
HIT000576035_02 (
ENST00000471620
)
(COBW domain-containing protein 3.)
genome : 42,674,313 - 42,684,223 (9,911)
query : 1 - 549 (549/549)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 21.5, cyto 21, cyto_plas 13.8333, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058617)
HIX0058617
HIT000593860_02 (
ENST00000490294
)
(COBW domain-containing protein 3.)
genome : 42,675,904 - 42,689,866 (13,963)
query : 1 - 369 (369/369)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 7, cyto_pero 7, cyto_plas 7,
cyto_golg 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058617)
HIX0058617
HIT000592882_02 (
ENST00000489273
)
(COBW domain-containing protein 5.)
genome : 42,681,207 - 42,714,591 (33,385)
query : 1 - 587 (587/587)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_plas 13.1667, cyto_nucl 13, extr 3,
nucl 2, mito 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058617)
HIX0058617
HIT000571226_02 (
ENST00000466582
)
(COBW domain-containing protein 5.)
genome : 42,687,353 - 42,714,912 (27,560)
query : 1 - 3,326 (3,326/3,326)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, cyto_nucl 15.5, nucl 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058617)
HIX0058617
HIT000583640_02 (
ENST00000479583
)
(COBW domain-containing protein 2; Cobalamin synthase W domain-containing protein 2;)
genome : 42,687,353 - 42,714,912 (27,560)
query : 1 - 3,305 (3,305/3,305)
6 exons
identity = 0.985
5'(0.983;1.000;1.000;1.000;0.992;0.990)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, cyto_nucl 15.5, nucl 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058617)
HIX0058617
HIT000588911_02 (
ENST00000485088
)
(COBW domain-containing protein 5.)
genome : 42,687,353 - 42,714,912 (27,560)
query : 1 - 3,326 (3,326/3,326)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, cyto_nucl 15.5, nucl 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058617)
HIX0058617
HIT000572648_02 (
ENST00000468066
)
(COBW domain-containing protein 5.)
genome : 42,689,826 - 42,714,500 (24,675)
query : 1 - 487 (487/487)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 17.6667, cyto_plas 12.1667, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058617)
HIX0058617
HIT000566793_02 (
ENST00000461932
)
(COBW domain-containing protein 5.)
genome : 42,700,305 - 42,714,914 (14,610)
query : 1 - 2,970 (2,970/2,970)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 10.8333, extr 10,
cyto_plas 8.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058617)
HIX0058617
HIT000599828_02 (
ENST00000496513
)
(COBW domain-containing protein 5.)
genome : 42,700,305 - 42,714,914 (14,610)
query : 1 - 2,970 (2,970/2,970)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 10.8333, extr 10,
cyto_plas 8.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058617)
HIX0058617
HIT000584813_02 (
ENST00000480819
)
(COBW domain-containing protein 5.)
genome : 42,700,875 - 42,714,591 (13,717)
query : 1 - 496 (496/496)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13, mito 5, nucl 2.5,
E.R._mito 2.5, mito_pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058617)
HIX0058617
HIT000555222_01 (
ENST00000457288
)
(COBW domain-containing protein 5.)
genome : 42,704,004 - 42,714,567 (10,564)
query : 1 - 449 (449/449)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 15.8333, cyto_plas 12.8333,
nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058617)
HIX0058617
HIT000589957_02 (
ENST00000486191
)
(COBW domain-containing protein 5.)
genome : 42,704,004 - 42,714,567 (10,564)
query : 1 - 449 (449/449)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 15.8333, cyto_plas 12.8333,
nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058617)
HIX0169340
HIT000088366_03
(
BC014347
)
Representative transcript
(Hypothetical short protein.)
genome : 42,704,131 - 42,704,818 (688)
query : 4 - 691 (688/720)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, nucl 6, mito 6, mito_nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169340)
HIX0058617
HIT000582554_02 (
ENST00000478448
)
(COBW domain-containing protein 5.)
genome : 42,711,081 - 42,714,404 (3,324)
query : 1 - 3,221 (3,221/3,221)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 10.8333, extr 10,
cyto_plas 8.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058617)
HIX0058617
HIT000567402_02 (
ENST00000462573
)
(COBW domain-containing protein 5.)
genome : 42,712,256 - 42,714,592 (2,337)
query : 1 - 722 (722/722)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_plas 13.1667, cyto_nucl 13, extr 3,
nucl 2, mito 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058617)
HIX0058617
HIT000567884_02 (
ENST00000463075
)
(COBW domain-containing protein 5.)
genome : 42,712,256 - 42,714,592 (2,337)
query : 1 - 722 (722/722)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_plas 13.1667, cyto_nucl 13, extr 3,
nucl 2, mito 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058617)
HIX0058617
HIT000595009_02 (
ENST00000491485
)
(COBW domain-containing protein 5.)
genome : 42,713,613 - 42,714,594 (982)
query : 1 - 595 (595/595)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 15.1667, cyto_plas 11, nucl 6,
extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058617)
HIX0169113
HIT000319672_03 (
NM_199244
)
(Transcription factor, fork head domain containing protein.)
genome : 42,717,234 - 42,720,342 (3,109)
query : 1 - 3,109 (3,109/3,109)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 19
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169113)
HIX0169113
HIT000358693_03 (
ENST00000377413
)
(Transcription factor, fork head domain containing protein.)
genome : 42,717,234 - 42,720,342 (3,109)
query : 1 - 3,109 (3,109/3,109)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 19
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169113)
HIX0169113
HIT000358870_03 (
ENST00000377590
)
(Transcription factor, fork head domain containing protein.)
genome : 42,717,234 - 42,720,342 (3,109)
query : 1 - 3,109 (3,109/3,109)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 19
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169113)
HIX0169113
HIT000485342_03 (
NM_001099279
)
(Transcription factor, fork head domain containing protein.)
genome : 42,717,234 - 42,720,342 (3,109)
query : 1 - 3,109 (3,109/3,109)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 19
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169113)
HIX0169117
HIT000613584_02 (
ENST00000514060
)
(Hypothetical protein.)
genome : 42,751,534 - 42,752,013 (480)
query : 1 - 337 (337/338)
2 exons
identity = 0.979
5'(1.000;0.976)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.5, cyto 10.5, nucl 9.5, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169117)
HIX0169117
HIT000529312_01 (
ENST00000431378
)
(Hypothetical protein.)
genome : 42,751,727 - 42,752,003 (277)
query : 1 - 277 (277/277)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, nucl 5.5, cyto_nucl 5.16667, cyto 3.5,
cyto_pero 3.33333, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169117)
HIX0169117
HIT000358695_04 (
ENST00000377415
)
(Hypothetical protein.)
genome : 42,751,728 - 42,752,393 (666)
query : 1 - 339 (339/339)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, nucl 3.5, cyto_nucl 3.33333, cyto 2,
cyto_pero 1.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169117)
HIX0169117
HIT000642770_03 (
ENST00000543725
)
(Hypothetical protein.)
genome : 42,751,734 - 42,752,040 (307)
query : 1 - 308 (308/321)
1 exon
identity = 0.990
5'(0.990)3'
coverage = 0.960
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, cyto_nucl 2, nucl 1.5, cyto 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169117)
HIX0169117
HIT000544878_01 (
ENST00000446944
)
(Hypothetical protein.)
genome : 42,751,734 - 42,752,019 (286)
query : 1 - 286 (286/286)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto_nucl 3.83333, nucl 3, cyto 2.5,
cyto_pero 2.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169117)
HIX0169132
HIT000429742_04
(
AK310876
)
Representative transcript
(Tripartite motif-containing protein 49-like protein 1; Tripartite motif-containing protein 49-like protein; Tripartite motif-containing protein 49D2 pseudogene;)
genome : 42,771,708 - 42,782,614 (10,907)
query : 1 - 1,264 (1,264/1,264)
5 exons
identity = 0.997
5'(1.000;1.000;1.000;0.993;0.994)3'
coverage = 1.000
InterPro :
IPR000315 : Zinc finger, B-box
IPR017907 : Zinc finger, RING-type, conserved site
GO :
0005622 : Cellular Component : intracellular
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169132)
Ortholog candidate ( ->
Evola
)
Takifugu
sp. (Fugu) : SINFRUT00000161448
HIX0169132
HIT000519025_01 (
ENST00000421091
)
(Tripartite motif-containing protein 51.)
genome : 42,779,313 - 42,779,711 (399)
query : 1 - 399 (399/399)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169132)
HIX0169132
HIT000548157_01 (
ENST00000450223
)
(Tripartite motif-containing protein 49-like protein 1; Tripartite motif-containing protein 49-like protein; Tripartite motif-containing protein 49D2 pseudogene;)
genome : 42,779,313 - 42,779,709 (397)
query : 1 - 397 (397/397)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169132)
HIX0169132
HIT000628837_01 (
ENST00000529682
)
(Tripartite motif-containing protein 51.)
genome : 42,779,313 - 42,779,707 (395)
query : 1 - 397 (397/397)
1 exon
identity = 0.960
5'(0.960)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto_nucl 6, nucl 5, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169132)
HIX0169132
HIT000543314_01 (
ENST00000445380
)
(Tripartite motif-containing protein 49-like protein 1; Tripartite motif-containing protein 49-like protein; Tripartite motif-containing protein 49D2 pseudogene;)
genome : 42,779,313 - 42,779,665 (353)
query : 1 - 353 (353/353)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169132)
HIX0169132
HIT000523996_01 (
ENST00000426062
)
(Tripartite motif-containing protein 49-like protein 1; Tripartite motif-containing protein 49-like protein; Tripartite motif-containing protein 49D2 pseudogene;)
genome : 42,779,314 - 42,779,707 (394)
query : 1 - 394 (394/394)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169132)
HIX0218649
HIT000553165_01 (
ENST00000455231
)
(Hypothetical protein.)
genome : 42,779,843 - 42,779,998 (156)
query : 1 - 156 (156/156)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 7, cyto_nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218649)
HIX0169090
HIT000048629_03
(
AK128756
)
Representative transcript
(Hypothetical protein.)
genome : 42,796,257 - 42,798,795 (2,539)
query : 1 - 1,927 (1,927/1,927)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 16.5, extr_plas 10, cyto 5, pero 3, cyto_mito 3,
plas 2.5, cyto_golg 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169090)
HIX0169090
HIT000691442_02 (
ENST00000579514
)
(Hypothetical protein.)
genome : 42,796,257 - 42,798,795 (2,539)
query : 1 - 1,928 (1,928/1,928)
2 exons
identity = 0.974
3'(0.972;0.975)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 18, extr 6, plas 4, cyto 2, cysk_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169090)
HIX0169090
HIT000692250_02 (
ENST00000580334
)
(Hypothetical protein.)
genome : 42,796,257 - 42,798,795 (2,539)
query : 1 - 1,928 (1,928/1,928)
2 exons
identity = 0.973
3'(0.972;0.973)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 18, extr 7, plas 3, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169090)
HIX0169090
HIT000695331_02 (
ENST00000583450
)
(Hypothetical protein.)
genome : 42,796,257 - 42,798,795 (2,539)
query : 1 - 1,928 (1,928/1,928)
2 exons
identity = 0.973
3'(0.972;0.973)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 18, extr 7, plas 3, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169090)
HIX0169090
HIT000582333_02 (
ENST00000478218
)
(Hypothetical protein.)
genome : 42,797,509 - 42,798,049 (541)
query : 1 - 541 (541/541)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 16.5, extr_plas 10, cyto 5, pero 3, cyto_mito 3,
plas 2.5, cyto_golg 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169090)
HIX0169215
HIT000514654 (
ENST00000416720
)
(Ribosome biogenesis protein BMS1/TSR1, C-terminal domain containing protein.)
genome : 42,808,660 - 42,812,274 (3,615)
query : 1 - 762 (762/762)
6 exons
identity = 0.997
5'(1.000;1.000;0.966;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 20, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169215)
HIX0169215
HIT000515235_01 (
ENST00000417301
)
(Ribosome biogenesis protein BMS1/TSR1, C-terminal domain containing protein.)
genome : 42,808,698 - 42,812,274 (3,577)
query : 1 - 885 (885/885)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 16.5, nucl 6.5, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169215)
HIX0169215
HIT000678246_01 (
ENST00000565156
)
(Ribosome biogenesis protein BMS1/TSR1, C-terminal domain containing protein.)
genome : 42,810,591 - 42,812,518 (1,928)
query : 1 - 672 (672/672)
3 exons
identity = 0.975
5'(1.000;0.939;0.981)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 20, mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169215)
HIX0169439
HIT000445426_08
(
DQ578895
)
Representative transcript
(Non-protein coding transcript.)
genome : 42,816,559 - 42,816,589 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169439)
HIX0169519
HIT000454416_06
(
DQ587885
)
Representative transcript
(Non-protein coding transcript.)
genome : 42,832,438 - 42,832,467 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169519)
HIX0008064
HIT000022007_03
(
AK097152
)
Representative transcript
(Monofunctional C1-tetrahydrofolate synthase, mitochondrial; EC=6.3.4.3; Formyltetrahydrofolate synthetase; Precursor;)
genome : 42,844,370 - 42,859,085 (14,716)
query : 1 - 2,593 (2,593/2,593)
4 exons
identity = 0.998
3'(0.999;1.000;1.000;0.994)5'
coverage = 1.000
InterPro :
IPR000559 : Formate-tetrahydrofolate ligase, FTHFS
GO :
0004329 : Molecular Function : formate-tetrahydrofolate ligase activity
0005524 : Molecular Function : ATP binding
0009396 : Biological Process : folic acid-containing compound biosynthetic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 6.5, cyto_nucl 6.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008064)
Ortholog candidate ( ->
Evola
)
Takifugu
sp. (Fugu) : SINFRUT00000145071
HIX0008064
HIT000709710_01 (
ENST00000597935
)
(Monofunctional C1-tetrahydrofolate synthase, mitochondrial; EC=6.3.4.3; Formyltetrahydrofolate synthetase; Precursor;)
genome : 42,844,395 - 42,857,869 (13,475)
query : 1 - 2,198 (2,198/2,198)
5 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 15, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008064)
HIX0008064
HIT000710360_01 (
ENST00000598595
)
(Monofunctional C1-tetrahydrofolate synthase, mitochondrial; EC=6.3.4.3; Formyltetrahydrofolate synthetase; Precursor;)
genome : 42,844,395 - 42,857,748 (13,354)
query : 1 - 2,086 (2,086/2,086)
5 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, extr 10, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008064)
HIX0008064
HIT000552702_01 (
ENST00000454768
)
(Monofunctional C1-tetrahydrofolate synthase, mitochondrial; EC=6.3.4.3; Formyltetrahydrofolate synthetase; Precursor;)
genome : 42,845,768 - 42,853,794 (8,027)
query : 1 - 519 (519/519)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13, nucl 9.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008064)
HIX0008064
HIT000712837_02 (
ENST00000601096
)
(Monofunctional C1-tetrahydrofolate synthase, mitochondrial; EC=6.3.4.3; Formyltetrahydrofolate synthetase; Precursor;)
genome : 42,845,907 - 42,854,356 (8,450)
query : 1 - 834 (834/834)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10, nucl 8.5, cyto 8.5, cysk 7, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008064)
HIX0008064
HIT000481707 (
ENST00000398522
)
(Monofunctional C1-tetrahydrofolate synthase, mitochondrial; EC=6.3.4.3; Formyltetrahydrofolate synthetase; Precursor;)
genome : 42,848,992 - 42,859,085 (10,094)
query : 1 - 960 (960/960)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.4.3
KEGG pathway :
00670 : One carbon pool by folate (24)
00720 : Carbon fixation pathways in prokaryotes (41)
01100 : Metabolic pathways (1346)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 5.5, mito 5, cyto_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008064)
HIX0008064
HIT000550370_01 (
ENST00000452436
)
(Monofunctional C1-tetrahydrofolate synthase, mitochondrial; EC=6.3.4.3; Formyltetrahydrofolate synthetase; Precursor;)
genome : 42,853,631 - 42,856,292 (2,662)
query : 1 - 321 (321/321)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 14, extr 6, nucl 4.5, mito 3,
extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008064)
HIX0008064
HIT000676033_02 (
ENST00000562856
)
(Monofunctional C1-tetrahydrofolate synthase, mitochondrial; EC=6.3.4.3; Formyltetrahydrofolate synthetase; Precursor;)
genome : 42,853,676 - 42,856,277 (2,602)
query : 1 - 261 (261/261)
2 exons
identity = 0.977
3'(0.967;0.991)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 15.8333, cyto_plas 9.66667,
extr 8, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008064)
HIX0008064
HIT000510235_01 (
ENST00000412301
)
(Monofunctional C1-tetrahydrofolate synthase, mitochondrial; EC=6.3.4.3; Formyltetrahydrofolate synthetase; Precursor;)
genome : 42,853,720 - 42,857,852 (4,133)
query : 1 - 476 (476/476)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 16.3333, cyto_plas 10.3333,
nucl 7.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008064)
HIX0034850
HIT000526693 (
ENST00000428759
)
(Aquaporin-7; AQP-7; Aquaglyceroporin-7; Aquaporin adipose; AQPap; Aquaporin-7-like;)
genome : 42,858,072 - 42,876,505 (18,434)
query : 1 - 2,351 (2,351/2,351)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 23, lyso 5, mito 2, pero 2, mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034850)
HIX0034850
HIT000099515
(
BC052332
)
(Hypothetical short protein.)
genome : 42,858,152 - 42,893,136 (34,985)
query : 1 - 528 (528/564)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034850)
HIX0034850
HIT000562809 (
NR_026558
)
(Conserved hypothetical protein.)
genome : 42,858,152 - 42,893,136 (34,985)
query : 1 - 528 (528/564)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034850)
HIX0034850
HIT000675097 (
ENST00000561882
)
(Aquaporin-7; AQP-7; Aquaglyceroporin-7; Aquaporin adipose; AQPap; Aquaporin-7-like;)
genome : 42,859,344 - 42,875,368 (16,025)
query : 1 - 1,044 (1,044/1,044)
7 exons
identity = 0.965
5'(1.000;0.977;0.944;0.952;0.978;0.940;0.983)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034850)
HIX0169333
HIT000048766_04
(
AK129495
)
Representative transcript
(Hypothetical protein.)
genome : 42,869,942 - 42,871,687 (1,746)
query : 2 - 1,768 (1,767/1,768)
1 exon
identity = 0.971
5'(0.971)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 10.5, nucl 10, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169333)
HIX0034850
HIT000127134 (
ENST00000331259
)
(Aquaporin-7; AQP-7; Aquaglyceroporin-7; Aquaporin adipose; AQPap; Aquaporin-7-like;)
genome : 42,873,281 - 42,875,170 (1,890)
query : 1 - 687 (687/687)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, lyso 4, E.R._mito 4, mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034850)
HIX0034850
HIT000012358_03
(
AK055744
)
Representative transcript
(Hypothetical protein.)
genome : 42,874,063 - 42,877,809 (3,747)
query : 1 - 3,755 (3,755/3,757)
1 exon
identity = 0.967
5'(0.967)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034850)
Ortholog candidate ( ->
Evola
)
Monodelphis
sp. (Opossum) : XM_001364642
HIX0218575
eHIT000023923 ( ESTsASS_9_298 )
Representative transcript
(Non-protein coding transcript.)
genome : 42,938,421 - 43,000,719 (62,299)
query : 1 - 320 (320/320)
3 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218575)
ESTs used for assembly :
BF958994,BF961645_dup2,BF958724_dup2
HIX0169379
HIT000393241_04
(
DQ786188
)
Representative transcript
(Hypothetical short protein.)
genome : 43,003,239 - 43,004,911 (1,673)
query : 6 - 641 (636/664)
3 exons
identity = 0.997
3'(0.995;1.000;1.000)5'
coverage = 0.992
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 8.33333, cyto 7, nucl 6.5,
cyto_pero 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169379)
HIX0218706
HIT000709982_02 (
ENST00000598212
)
(Hypothetical protein.)
genome : 43,007,105 - 43,008,297 (1,193)
query : 1 - 1,193 (1,193/1,193)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 9, cyto_nucl 7, extr_plas 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218706)
HIX0218551
HIT000682722_02 (
ENST00000569791
)
(Smooth muscle protein/calponin family protein.)
genome : 43,009,843 - 43,010,754 (912)
query : 3 - 913 (911/913)
1 exon
identity = 0.975
5'(0.975)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, cyto 10.5, cyto_nucl 6.5, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218551)
HIX0218551
HIT000707892_02 (
ENST00000596103
)
(Smooth muscle protein/calponin family protein.)
genome : 43,009,842 - 43,010,747 (906)
query : 1 - 906 (906/906)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, cyto 11.5, nucl 8.5, mito 7, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218551)
HIX0169673
HIT000513958_02 (
ENST00000416024
)
(Hypothetical protein.)
genome : 43,023,433 - 43,023,898 (466)
query : 1 - 466 (466/466)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, mito 6, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169673)
HIX0169080
HIT000261290_04
(
BC064148
)
Representative transcript
(Leukotriene-B(4) omega-hydroxylase 2; EC=1.14.13.30; CYPIVF3; Cytochrome P450 4F3; Cytochrome P450-LTB-omega; Leukotriene-B(4) 20-monooxygenase 2;)
genome : 43,027,665 - 43,033,312 (5,648)
query : 1 - 1,541 (1,541/1,684)
5 exons
identity = 0.998
3'(0.997;1.000;1.000;0.992;1.000)5'
coverage = 0.999
EC number :
EC 1.14.13.30
KEGG pathway :
00590 : Arachidonic acid metabolism (26)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, cyto_nucl 10.5, nucl 8, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169080)
HIX0169080
HIT000562944_02 (
NR_026759
)
(Leukotriene-B(4) omega-hydroxylase 2; EC=1.14.13.30; CYPIVF3; Cytochrome P450 4F3; Cytochrome P450-LTB-omega; Leukotriene-B(4) 20-monooxygenase 2;)
genome : 43,027,663 - 43,033,312 (5,650)
query : 1 - 1,543 (1,543/1,543)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.13.30
KEGG pathway :
00590 : Arachidonic acid metabolism (26)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, cyto_nucl 9.5, extr_plas 9.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169080)
HIX0169080
HIT000045723_04
(
AK125850
)
(Leukotriene-B(4) omega-hydroxylase 2; EC=1.14.13.30; CYPIVF3; Cytochrome P450 4F3; Cytochrome P450-LTB-omega; Leukotriene-B(4) 20-monooxygenase 2;)
genome : 43,027,665 - 43,035,584 (7,920)
query : 1 - 4,238 (4,238/4,238)
4 exons
identity = 0.996
3'(0.997;0.988;1.000;0.996)5'
coverage = 1.000
EC number :
EC 1.14.13.30
KEGG pathway :
00590 : Arachidonic acid metabolism (26)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 8, cyto 4, mito_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169080)
HIX0169080
HIT000703874_02 (
ENST00000592053
)
(Leukotriene-B(4) omega-hydroxylase 2; EC=1.14.13.30; CYPIVF3; Cytochrome P450 4F3; Cytochrome P450-LTB-omega; Leukotriene-B(4) 20-monooxygenase 2;)
genome : 43,027,665 - 43,033,312 (5,648)
query : 1 - 1,541 (1,541/1,541)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.13.30
KEGG pathway :
00590 : Arachidonic acid metabolism (26)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, cyto_nucl 9.5, extr_plas 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169080)
HIX0169080
HIT000018310_04
(
AK093443
)
(Activating molecule in BECN1-regulated autophagy protein 1 isoform 1.)
genome : 43,027,665 - 43,029,567 (1,903)
query : 1 - 1,903 (1,903/1,903)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169080)
HIX0218533
HIT000551932_02 (
ENST00000453998
)
(Hypothetical protein.)
genome : 43,027,748 - 43,032,877 (5,130)
query : 1 - 783 (783/783)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 9, cyto 6.5, cyto_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218533)
HIX0169080
HIT000704865_02 (
ENST00000593047
)
(Cytochrome P450 4F11; EC=1.14.14.1; CYPIVF11;)
genome : 43,027,754 - 43,031,948 (4,195)
query : 1 - 767 (767/767)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.14.1
KEGG pathway :
00071 : Fatty acid metabolism (28)
00140 : Steroid hormone biosynthesis (37)
00232 : Caffeine metabolism (9)
00380 : Tryptophan metabolism (54)
00590 : Arachidonic acid metabolism (26)
00591 : Linoleic acid metabolism (11)
00627 : Aminobenzoate degradation (45)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
00983 : Drug metabolism - other enzymes (20)
01100 : Metabolic pathways (1346)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, extr 10, nucl 4, cyto_pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169080)
HIX0169080
HIT000700952_02 (
ENST00000589112
)
(Hypothetical protein.)
genome : 43,027,772 - 43,031,403 (3,632)
query : 1 - 768 (768/768)
4 exons
identity = 0.993
3'(1.000;0.969;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 12, cyto_nucl 3.66667, nucl 3.5,
cyto_pero 2.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169080)
HIX0169080
HIT000698123_02 (
ENST00000586273
)
(Hypothetical protein.)
genome : 43,027,826 - 43,032,017 (4,192)
query : 1 - 798 (798/798)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 12, cyto_nucl 3.66667, nucl 3.5,
cyto_pero 2.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169080)
HIX0218533
HIT000544805_02 (
ENST00000446871
)
(Cytochrome P450 family protein.)
genome : 43,030,414 - 43,031,450 (1,037)
query : 1 - 520 (520/520)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, extr 6, nucl 3, extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218533)
HIX0169080
HIT000702089_02 (
ENST00000590254
)
(Hypothetical protein.)
genome : 43,031,248 - 43,033,158 (1,911)
query : 1 - 663 (663/663)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto_nucl 8, cyto 6.5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169080)
HIX0169080
HIT000700057_02 (
ENST00000588217
)
(Cytochrome P450 4F12; EC=1.14.14.1; CYPIVF12;)
genome : 43,031,251 - 43,033,158 (1,908)
query : 1 - 653 (653/653)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.14.1
KEGG pathway :
00071 : Fatty acid metabolism (28)
00140 : Steroid hormone biosynthesis (37)
00232 : Caffeine metabolism (9)
00380 : Tryptophan metabolism (54)
00590 : Arachidonic acid metabolism (26)
00591 : Linoleic acid metabolism (11)
00627 : Aminobenzoate degradation (45)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
00983 : Drug metabolism - other enzymes (20)
01100 : Metabolic pathways (1346)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 7.83333, nucl 7.5, cyto 5,
cyto_pero 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169080)
HIX0169080
HIT000697274_02 (
ENST00000585417
)
(Hypothetical protein.)
genome : 43,031,326 - 43,033,158 (1,833)
query : 1 - 675 (675/675)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 9, nucl 6.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169080)
HIX0169080
HIT000698687_02 (
ENST00000586842
)
(Hypothetical protein.)
genome : 43,031,356 - 43,033,158 (1,803)
query : 1 - 789 (789/789)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 12, cyto_nucl 11.5, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169080)
HIX0169080
HIT000679729_03 (
ENST00000566698
)
(Hypothetical protein.)
genome : 43,031,941 - 43,032,282 (342)
query : 2 - 343 (342/343)
1 exon
identity = 0.950
3'(0.950)5'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 11.5, cyto_nucl 11, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169080)
HIX0169080
HIT000698024_02 (
ENST00000586172
)
(Hypothetical protein.)
genome : 43,032,082 - 43,033,158 (1,077)
query : 1 - 709 (709/709)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 8.5, nucl 7, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169080)
HIX0169080
HIT000441058_07
(
DQ574527
)
(Non-protein coding transcript.)
genome : 43,032,174 - 43,032,204 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169080)
HIX0169080
HIT000455330_04
(
DQ588799
)
(Non-protein coding transcript.)
genome : 43,032,784 - 43,032,813 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169080)
HIX0169080
HIT000444696_07
(
DQ578165
)
(Non-protein coding transcript.)
genome : 43,033,254 - 43,033,283 (30)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
3'(0.967)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169080)
HIX0169080
HIT000461663_07
(
DQ595132
)
(Non-protein coding transcript.)
genome : 43,033,698 - 43,033,728 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169080)
HIX0169080
HIT000453302_08
(
DQ586771
)
(Non-protein coding transcript.)
genome : 43,034,360 - 43,034,389 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169080)
HIX0169080
HIT000464513_05
(
DQ597982
)
(Non-protein coding transcript.)
genome : 43,035,020 - 43,035,051 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169080)
HIX0169080
HIT000446274_07
(
DQ579743
)
(Non-protein coding transcript.)
genome : 43,035,053 - 43,035,081 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169080)
HIX0209208
HIT000460903_05
(
DQ594372
)
Representative transcript
(Non-protein coding transcript.)
genome : 43,035,658 - 43,035,686 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209208)
HIX0169524
HIT000454825_05
(
DQ588294
)
Representative transcript
(Non-protein coding transcript.)
genome : 43,037,034 - 43,037,063 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169524)
HIX0169413
HIT000442693_10
(
DQ576162
)
Representative transcript
(Non-protein coding transcript.)
genome : 43,044,749 - 43,044,778 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169413)
HIX0169516
HIT000454199_08
(
DQ587668
)
Representative transcript
(Non-protein coding transcript.)
genome : 43,045,786 - 43,045,816 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169516)
HIX0169550
HIT000463589_10
(
DQ597058
)
Representative transcript
(Non-protein coding transcript.)
genome : 43,046,368 - 43,046,397 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169550)
HIX0169506
HIT000452885_04
(
DQ586354
)
Representative transcript
(Non-protein coding transcript.)
genome : 43,049,408 - 43,049,437 (30)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
3'(0.967)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169506)
HIX0169485
HIT000449544_04
(
DQ583013
)
Representative transcript
(Non-protein coding transcript.)
genome : 43,050,238 - 43,050,267 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169485)
HIX0169570
HIT000467969_10
(
DQ601438
)
Representative transcript
(Non-protein coding transcript.)
genome : 43,050,274 - 43,050,303 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169570)
HIX0169414
HIT000442693_11
(
DQ576162
)
Representative transcript
(Non-protein coding transcript.)
genome : 43,050,955 - 43,050,984 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169414)
HIX0169517
HIT000454199_09
(
DQ587668
)
Representative transcript
(Non-protein coding transcript.)
genome : 43,051,993 - 43,052,023 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169517)
HIX0169551
HIT000463589_11
(
DQ597058
)
Representative transcript
(Non-protein coding transcript.)
genome : 43,056,468 - 43,056,497 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169551)
HIX0169571
HIT000467969_11
(
DQ601438
)
Representative transcript
(Non-protein coding transcript.)
genome : 43,059,980 - 43,060,009 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169571)
HIX0126781
HIT000520829 (
ENST00000422895
)
(Conserved hypothetical protein.)
genome : 43,062,929 - 43,063,757 (829)
query : 1 - 829 (829/829)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 14.5, extr 8, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0126781)
HIX0126781
HIT000464373
(
DQ597842
)
(Non-protein coding transcript.)
genome : 43,063,564 - 43,063,593 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0126781)
HIX0126781
HIT000442918_08
(
DQ576387
)
Representative transcript
(Non-protein coding transcript.)
genome : 43,063,608 - 43,063,637 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0126781)
HIX0169457
HIT000446503_09
(
DQ579972
)
Representative transcript
(Non-protein coding transcript.)
genome : 43,064,950 - 43,064,981 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169457)
HIX0169138
HIT000454666_04
(
DQ588135
)
(Non-protein coding transcript.)
genome : 43,065,004 - 43,065,033 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169138)
HIX0169138
HIT000437470_07
(
DQ570939
)
Representative transcript
(Non-protein coding transcript.)
genome : 43,065,032 - 43,065,063 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169138)
HIX0169138
HIT000463706_07
(
DQ597175
)
(Non-protein coding transcript.)
genome : 43,065,033 - 43,065,062 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169138)
HIX0169527
HIT000455894_09
(
DQ589363
)
Representative transcript
(Non-protein coding transcript.)
genome : 43,065,106 - 43,065,137 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169527)
HIX0169238
HIT000518242_02 (
ENST00000420308
)
(Hypothetical protein.)
genome : 43,065,382 - 43,065,609 (228)
query : 1 - 228 (228/228)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 5.5, cyto_nucl 5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169238)
HIX0169238
HIT000518661_02 (
ENST00000420727
)
(Hypothetical protein.)
genome : 43,065,382 - 43,065,609 (228)
query : 1 - 228 (228/228)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 5.5, cyto_nucl 5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169238)
HIX0169388
HIT000437081_07
(
DQ570550
)
Representative transcript
(Non-protein coding transcript.)
genome : 43,066,337 - 43,066,367 (31)
query : 1 - 31 (31/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.969
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169388)
HIX0169487
HIT000450019_10
(
DQ583488
)
Representative transcript
(Non-protein coding transcript.)
genome : 43,066,444 - 43,066,471 (28)
query : 3 - 30 (28/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.933
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169487)
HIX0209181
HIT000447551_07
(
DQ581020
)
Representative transcript
(Non-protein coding transcript.)
genome : 43,066,651 - 43,066,680 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209181)
HIX0169543
HIT000459961_04
(
DQ593430
)
Representative transcript
(Non-protein coding transcript.)
genome : 43,066,692 - 43,066,722 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169543)
HIX0218550
HIT000675499_02 (
ENST00000562294
)
(Protein of unknown function DUF3496 family protein.)
genome : 43,072,283 - 43,082,867 (10,585)
query : 1 - 534 (534/534)
3 exons
identity = 0.959
3'(0.957;0.953;0.973)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 12, nucl 7.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218550)
HIX0218550
HIT000700408_03 (
ENST00000588568
)
(Protein of unknown function DUF3496 family protein.)
genome : 43,072,300 - 43,082,885 (10,586)
query : 1 - 536 (536/536)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, extr 4, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218550)
HIX0169149
HIT000702061_02 (
ENST00000590226
)
(Hypothetical protein.)
genome : 43,087,407 - 44,079,086 (991,680)
query : 1 - 5,574 (5,574/5,589)
3 exons
identity = 0.978
3'(0.974)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, mito 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169149)
HIX0169149
HIT000714107_02 (
ENST00000602374
)
(Hypothetical protein.)
genome : 43,087,407 - 44,079,086 (991,680)
query : 1 - 5,574 (5,574/5,589)
3 exons
identity = 0.978
3'(0.974)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, mito 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169149)
HIX0008066
HIT000106691 (
ENST00000254835
)
(Ankyrin repeat domain-containing protein 20A1.)
genome : 43,089,972 - 43,133,544 (43,573)
query : 1 - 3,964 (3,964/3,964)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 16.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008066)
HIX0008066
HIT000316885 (
NM_001012419
)
(Ankyrin repeat domain-containing protein 20A1.)
genome : 43,089,972 - 43,133,510 (43,539)
query : 1 - 3,930 (3,930/3,930)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 16.5, cyto 7.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008066)
HIX0008066
HIT000025389_06
(
AL136793
)
Representative transcript
(Ankyrin repeat domain-containing protein 20A1.)
genome : 43,090,425 - 43,133,544 (43,120)
query : 2 - 3,518 (3,517/3,527)
15 exons
identity = 0.995
3'(0.993;1.000;1.000;1.000;0.986;1.000;1.000;
1.000;1.000;1.000;1.000;0.991;0.994;1.000;
0.997)5'
coverage = 1.000
InterPro :
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 16.5, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008066)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : ENSPTRT00000022661
Equus
sp. (Horse) : XM_001495349
Macaca
sp. (Macaque) : XR_014691
Pan
sp. (Chimpanzee) : XR_023459
HIX0008066
HIT000501558_02
(
BC140809
)
(Ankyrin repeat domain-containing protein 20A1.)
genome : 43,091,186 - 43,133,510 (42,325)
query : 1 - 2,713 (2,713/2,713)
15 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.993)5'
coverage = 1.000
InterPro :
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 16.5, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008066)
HIX0008066
HIT000503524_02
(
BC171793
)
(Ankyrin repeat domain-containing protein 20A1.)
genome : 43,091,194 - 43,133,510 (42,317)
query : 1 - 2,705 (2,705/2,705)
15 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.993)5'
coverage = 1.000
InterPro :
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 16.5, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008066)
HIX0008066
HIT000544069_02 (
ENST00000446135
)
(Ankyrin repeat domain-containing protein 20B; Ankyrin repeat domain-containing protein 20A pseudogene;)
genome : 43,091,351 - 43,133,432 (42,082)
query : 1 - 2,489 (2,489/2,489)
15 exons
identity = 0.983
3'(0.987;1.000;0.988;1.000;0.959;1.000;0.988;
0.986;0.963;0.911;0.979;0.959;0.978;0.991;
0.985)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 15.5, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008066)
HIX0008066
HIT000714648_02 (
ENST00000602915
)
(Ankyrin repeat domain-containing protein 20B; Ankyrin repeat domain-containing protein 20A pseudogene;)
genome : 43,091,351 - 43,133,432 (42,082)
query : 1 - 2,489 (2,489/2,489)
15 exons
identity = 0.983
3'(0.987;1.000;0.988;1.000;0.959;1.000;0.988;
0.986;0.963;0.911;0.979;0.959;0.978;0.991;
0.985)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 15.5, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008066)
HIX0008066
HIT000695229_04 (
ENST00000583348
)
(Ankyrin repeat domain-containing protein 20B; Ankyrin repeat domain-containing protein 20A pseudogene;)
genome : 43,092,206 - 43,093,675 (1,470)
query : 1 - 300 (300/300)
2 exons
identity = 0.967
3'(0.959;0.972)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, mito 6, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008066)
HIX0008066
HIT000577660_04 (
ENST00000473324
)
(Ankyrin repeat domain-containing protein 20A1.)
genome : 43,093,621 - 43,099,506 (5,886)
query : 1 - 401 (401/401)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 15.5, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008066)
HIX0008066
HIT000589071_02 (
ENST00000485255
)
(Ankyrin repeat domain-containing protein 20A1.)
genome : 43,098,071 - 43,133,363 (35,293)
query : 1 - 473 (473/473)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, extr 3, cyto 2, mito 2, cyto_mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008066)
HIX0169295
HIT000551880_01 (
ENST00000453946
)
(Hypothetical short protein.)
genome : 43,102,670 - 43,113,526 (10,857)
query : 1 - 362 (362/362)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169295)
HIX0169295
HIT000537179 (
ENST00000439245
)
(Hypothetical short protein.)
genome : 43,102,670 - 43,113,375 (10,706)
query : 1 - 256 (256/256)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169295)
HIX0008066
HIT000454119_09
(
DQ587588
)
(Non-protein coding transcript.)
genome : 43,129,487 - 43,129,516 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008066)
HIX0008066
HIT000443059_06
(
DQ576528
)
(Non-protein coding transcript.)
genome : 43,129,836 - 43,129,867 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008066)
HIX0008066
HIT000441310_09
(
DQ574779
)
(Non-protein coding transcript.)
genome : 43,133,355 - 43,133,384 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008066)
HIX0025800
HIT000046736
(
AK126863
)
Representative transcript
(Conserved hypothetical protein.)
genome : 43,134,811 - 43,138,862 (4,052)
query : 2 - 3,210 (3,209/3,210)
2 exons
identity = 0.985
5'(0.993;0.980)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 18, plas 9, E.R._mito 9, cyto_mito 9,
mito_pero 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025800)
HIX0025800
HIT000358717 (
ENST00000377437
)
(Conserved hypothetical protein.)
genome : 43,135,095 - 43,135,514 (420)
query : 1 - 420 (420/420)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 16, plas 9, nucl 3, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025800)
HIX0169478
HIT000447729_08
(
DQ581198
)
Representative transcript
(Non-protein coding transcript.)
genome : 43,137,946 - 43,137,976 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169478)
HIX0095559
HIT000393242
(
DQ786189
)
Representative transcript
(Conserved hypothetical protein.)
genome : 43,140,538 - 43,145,482 (4,945)
query : 3 - 983 (981/998)
5 exons
identity = 0.998
3'(1.000;0.993;1.000;1.000;0.997)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 14.5, cyto 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0095559)
HIX0095559
HIT000563526 (
NR_027472
)
(Conserved hypothetical protein.)
genome : 43,140,538 - 43,145,484 (4,947)
query : 1 - 984 (984/999)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 14.5, cyto 11.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0095559)
HIX0095559
HIT000551873 (
ENST00000453939
)
(General transcription factor II-I; GTFII-I; TFII-I; Bruton tyrosine kinase-associated protein 135; BAP-135; BTK-associated protein 135; SRF-Phox1-interacting protein; SPIN; Williams-Beuren syndrome chromosomal region 6 protein;)
genome : 43,140,537 - 43,142,739 (2,203)
query : 1 - 382 (382/382)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 13, cyto 9, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0095559)
HIX0095559
HIT000545547 (
ENST00000447613
)
(Hypothetical short protein.)
genome : 43,144,980 - 43,160,008 (15,029)
query : 1 - 957 (957/957)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0095559)
HIX0170125
HIT000545427 (
ENST00000447493
)
(MATH domain containing protein.)
genome : 43,162,901 - 43,169,024 (6,124)
query : 1 - 1,090 (1,090/1,090)
4 exons
identity = 0.985
5'(0.991;0.971;0.977;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 16, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170125)
HIX0169219
HIT000548845_01 (
ENST00000450911
)
(GPCR, family 2, Ig-hepta receptor protein.)
genome : 43,184,068 - 43,189,411 (5,344)
query : 1 - 1,716 (1,716/1,716)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, nucl 6, cyto_nucl 5, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169219)
HIX0169219
HIT000515352_02 (
ENST00000417418
)
(GPCR, family 2, Ig-hepta receptor protein.)
genome : 43,185,476 - 43,189,411 (3,936)
query : 1 - 308 (308/308)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, nucl 6, cyto_nucl 5, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169219)
HIX0169115
HIT000523196_01 (
ENST00000425262
)
(Beta-trefoil DNA-binding domain containing protein.)
genome : 43,313,699 - 43,314,502 (804)
query : 1 - 804 (804/804)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 10.5, extr 9, mito 5.5,
E.R._mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169115)
HIX0169115
HIT000604642_02 (
ENST00000504423
)
(Beta-trefoil DNA-binding domain containing protein.)
genome : 43,313,786 - 43,314,346 (561)
query : 1 - 405 (405/405)
2 exons
identity = 0.953
5'(0.957;0.951)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 8, cyto_nucl 8, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169115)
HIX0169174
HIT000546259_01 (
ENST00000448325
)
(Hypothetical protein.)
genome : 43,318,617 - 43,319,525 (909)
query : 1 - 597 (597/597)
2 exons
identity = 0.990
3'(0.991;0.989)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto 11, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169174)
HIX0169174
HIT000549486_01 (
ENST00000451552
)
(Hypothetical protein.)
genome : 43,318,619 - 43,319,576 (958)
query : 1 - 647 (647/647)
2 exons
identity = 0.992
3'(0.994;0.990)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto 11, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169174)
HIX0169927
HIT000531157_01 (
ENST00000433223
)
(ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal domain containing protein.)
genome : 43,399,987 - 43,401,315 (1,329)
query : 1 - 1,329 (1,329/1,329)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169927)
HIX0170039
HIT000540009 (
ENST00000442075
)
(3-beta hydroxysteroid dehydrogenase/isomerase domain containing protein.)
genome : 43,403,148 - 43,403,646 (499)
query : 1 - 499 (499/499)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 16, mito 7, extr 4, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170039)
HIX0218705
HIT000709056 (
ENST00000597277
)
(Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain containing protein.)
genome : 43,425,713 - 43,427,044 (1,332)
query : 1 - 1,332 (1,332/1,332)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 13.5, nucl 5.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218705)
HIX0218575
eHIT000023923 ( ESTsASS_9_298 )
Representative transcript
(Non-protein coding transcript.)
genome : 42,938,421 - 43,000,719 (62,299)
query : 1 - 320 (320/320)
3 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218575)
ESTs used for assembly :
BF958994,BF961645_dup2,BF958724_dup2
BX664615.10
42000001-42000707 F +
NCBI
CR769767.5
42000708-42112487 F +
NCBI
AL772307.16
42112488-42216269 F +
NCBI
AL773545.13
42216270-42378155 F +
NCBI
BX664727.7
42378156-42484084 F +
NCBI
AL591471.8
42484085-42613955 F -
NCBI
50000
42613956-42663955 N
AC129778.5
42663956-42900132 F -
NCBI
AL136317.5
42900133-43019827 F -
NCBI
AL669942.7
43019828-43035199 F +
NCBI
AL513478.10
43035200-43213698 F +
NCBI
100000
43213699-43313698 N
BX649597.2
43313699-43479693 F +
NCBI
AL445584.16
43479694-43600000 F -
NCBI