Clickable map CGI

HIX0034836
HIT000091459 ( BC028038 )
  (Receptor-type tyrosine-protein phosphatase delta; Protein-tyrosine phosphatase delta; R-PTP-delta; EC=3.1.3.48; Precursor;)
  genome : 8,528,155 - 10,612,723 (2,084,569)
  query : 1 - 1,694 (1,694/1,815)
  17 exons
  identity = 0.999
  3'(1.000;1.000)5'
  coverage = 1.000
  EC number :
    EC 3.1.3.48
  InterPro :
    IPR003598 : Immunoglobulin subtype 2
    IPR013098 : Immunoglobulin I-set
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 29
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0034836)

HIX0034836
HIT000568270 ( ENST00000463477 )
  (Receptor-type tyrosine-protein phosphatase delta; Protein-tyrosine phosphatase delta; R-PTP-delta; EC=3.1.3.48; Precursor;)
  genome : 8,528,152 - 10,612,723 (2,084,572)
  query : 1 - 1,697 (1,697/1,697)
  17 exons
  identity = 1.000
  3'(1.000;1.000)5'
  coverage = 1.000
  EC number :
    EC 3.1.3.48
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 29
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0034836)

HIX0169993
HIT000535635 ( ENST00000437701 )
  (Ribosomal protein S12e family protein.)
  genome : 10,532,145 - 10,532,411 (267)
  query : 1 - 267 (267/267)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 24, extr 4, nucl 2, cyto 2, cyto_nucl 2,
    extr_plas 2
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0169993)

HIX0035120
HIT000527515 ( ENST00000429581 )
  (Conserved hypothetical protein.)
  genome : 10,613,202 - 10,618,218 (5,017)
  query : 1 - 636 (636/636)
  3 exons
  identity = 1.000
  5'(1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 18, extr 5, cyto 4.5, cyto_nucl 3.5, golg 2
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0035120)

HIX0035120
HIT000098125 ( BC045688 )
  Representative transcript
  (Activating molecule in BECN1-regulated autophagy protein 1 isoform 1.)
  genome : 10,613,206 - 10,620,420 (7,215)
  query : 1 - 2,834 (2,834/2,849)
  3 exons
  identity = 0.992
  5'(0.986;1.000;0.992)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 15, nucl 11.5, cyto_nucl 8.83333, cyto 3,
    cyto_pero 2.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0035120)

HIX0169846
HIT000525095 ( ENST00000427161 )
  (Hypothetical short protein.)
  genome : 10,631,750 - 10,632,203 (454)
  query : 1 - 157 (157/157)
  2 exons
  identity = 1.000
  3'(1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0169846)

HIX0170036
HIT000539739 ( ENST00000441805 )
  (Non-protein coding transcript.)
  genome : 10,777,357 - 10,777,525 (169)
  query : 1 - 169 (169/169)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0170036)

HIX0169852
HIT000525466 ( ENST00000427532 )
  (Conserved hypothetical protein.)
  genome : 10,829,752 - 10,830,308 (557)
  query : 1 - 557 (557/557)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 30
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0169852)

HIX0189391
HIT000532677 ( ENST00000434743 )
  (A-kinase anchoring protein 95 (AKAP95) family protein.)
  genome : 11,011,748 - 11,013,096 (1,349)
  query : 1 - 1,349 (1,349/1,349)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 21, extr 5, mito 5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0189391)

HIX0190465
pHIT000107604 ( pHIT000107604 )
  Representative transcript
  (Hypothetical protein.)
  genome : 11,199,721 - 11,220,011 (20,291)
  query : 1 - 411 (411/411)
  3 exons
  SOSUI :
    SOLUBLE PROTEIN
  JIGSAW prediction
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0190465)
  CAGE tag :
    T09F00AA0FAF

HIX0169988
HIT000535405 ( ENST00000437471 )
  (Hypothetical short protein.)
  genome : 11,275,314 - 11,276,314 (1,001)
  query : 1 - 285 (285/285)
  2 exons
  identity = 1.000
  3'(1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0169988)

HIX0169511
HIT000453736_06 ( DQ587205 )
  Representative transcript
  (Non-protein coding transcript.)
  genome : 11,928,202 - 11,928,231 (30)
  query : 1 - 30 (30/30)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0169511)

HIX0035284
HIT000216407 ( S71605 )
  Representative transcript
  (Non-protein coding transcript.)
  genome : 12,019,269 - 12,019,379 (111)
  query : 1 - 111 (111/111)
  1 exon
  identity = 0.982
  3'(0.982)5'
  coverage = 1.000
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0035284)

HIX0170206
HIT000550619 ( ENST00000452685 )
  (Hypothetical short protein.)
  genome : 12,098,660 - 12,159,147 (60,488)
  query : 1 - 561 (561/561)
  4 exons
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 10, cyto_nucl 10, nucl 9.5, cyto 9.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0170206)

bases per tick : kb first site :
main : All Human Genes JIGSAW prediction ESTs assembly
homology : UCSC CCDS Pseudogene.org Conserved regions ( Segmental duplication P.troglodytes P.abelii M.mulatta M.musculus R.norvegicus C.familiaris E.caballus B.taurus M.domestica G.gallus D.rerio O.latipes T.nigroviridis T.rubripes )
gene prediction : FGENESH GenScan HMMgene tRNA
show... : SNPs ESTs(summary) ESTs(detail) CAGE tag(summary) CAGE tag(detail)
sequence viewer : = ( , )