bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0007603
HIT000216700
(
S76965
)
Representative transcript
(cAMP-dependent protein kinase inhibitor alpha; PKI-alpha; cAMP-dependent protein kinase inhibitor, muscle/brain isoform;)
genome : 79,428,336 - 79,515,449 (87,114)
query : 9 - 2,123 (2,115/2,147)
5 exons
identity = 0.997
5'(1.000;0.998;1.000)3'
coverage = 0.985
InterPro :
IPR004171 : cAMP-dependent protein kinase inhibitor
GO :
0004862 : Molecular Function : cAMP-dependent protein kinase inhibitor activity
0006469 : Biological Process : negative regulation of protein kinase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 15, nucl 8.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007603)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB172145
Mus
sp. (Mouse) : BC048244
Bos
sp. (Cow) : BC104561
Danio
sp. (Zebrafish) : BC122445
Equus
sp. (Horse) : ENSECAT00000023804
Gallus
sp. (Chicken) : ENSGALT00000025372
Pongo
sp. (Orangutan) : ENSPPYT00000021804
Pan
sp. (Chimpanzee) : ENSPTRT00000037695
Rattus
sp. (Rat) : L02615
Monodelphis
sp. (Opossum) : XM_001367398
Canis
sp. (Dog) : XM_848290
HIX0007603
HIT000203391 (
NM_006823
)
(cAMP-dependent protein kinase inhibitor alpha; PKI-alpha; cAMP-dependent protein kinase inhibitor, muscle/brain isoform;)
genome : 79,428,336 - 79,517,502 (89,167)
query : 1 - 4,201 (4,201/4,215)
4 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 15, nucl 8.5, extr 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007603)
HIX0007603
HIT000318528 (
NM_181839
)
(cAMP-dependent protein kinase inhibitor alpha; PKI-alpha; cAMP-dependent protein kinase inhibitor, muscle/brain isoform;)
genome : 79,428,336 - 79,517,502 (89,167)
query : 1 - 4,072 (4,072/4,072)
3 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 15, nucl 8.5, extr 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007603)
HIX0007603
HIT000479764 (
ENST00000396418
)
(cAMP-dependent protein kinase inhibitor alpha; PKI-alpha; cAMP-dependent protein kinase inhibitor, muscle/brain isoform;)
genome : 79,428,374 - 79,517,502 (89,129)
query : 1 - 4,163 (4,163/4,163)
4 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 15, nucl 8.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007603)
HIX0007603
HIT000308319 (
ENST00000352966
)
(cAMP-dependent protein kinase inhibitor alpha; PKI-alpha; cAMP-dependent protein kinase inhibitor, muscle/brain isoform;)
genome : 79,428,590 - 79,515,420 (86,831)
query : 1 - 1,736 (1,736/1,736)
3 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 15, nucl 8.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007603)
HIX0007603
HIT000617844 (
ENST00000518467
)
(cAMP-dependent protein kinase inhibitor alpha; PKI-alpha; cAMP-dependent protein kinase inhibitor, muscle/brain isoform;)
genome : 79,503,466 - 79,514,333 (10,868)
query : 1 - 588 (588/588)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 15, nucl 8.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007603)
HIX0007603
HIT000430723
(
AK311857
)
(cAMP-dependent protein kinase inhibitor alpha; PKI-alpha; cAMP-dependent protein kinase inhibitor, muscle/brain isoform;)
genome : 79,503,466 - 79,514,056 (10,591)
query : 1 - 311 (311/311)
3 exons
identity = 0.997
5'(1.000;0.994;1.000)3'
coverage = 1.000
InterPro :
IPR004171 : cAMP-dependent protein kinase inhibitor
GO :
0004862 : Molecular Function : cAMP-dependent protein kinase inhibitor activity
0006469 : Biological Process : negative regulation of protein kinase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 15, nucl 8.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007603)
HIX0007603
HIT000039438
(
BC022265
)
(cAMP-dependent protein kinase inhibitor alpha; PKI-alpha; cAMP-dependent protein kinase inhibitor, muscle/brain isoform;)
genome : 79,510,594 - 79,515,445 (4,852)
query : 1 - 1,646 (1,646/1,674)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004171 : cAMP-dependent protein kinase inhibitor
GO :
0004862 : Molecular Function : cAMP-dependent protein kinase inhibitor activity
0006469 : Biological Process : negative regulation of protein kinase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 15, nucl 8.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007603)
HIX0007603
HIT000267902
(
CR457052
)
(cAMP-dependent protein kinase inhibitor alpha; PKI-alpha; cAMP-dependent protein kinase inhibitor, muscle/brain isoform;)
genome : 79,510,620 - 79,514,056 (3,437)
query : 1 - 231 (231/231)
2 exons
identity = 0.996
5'(1.000;0.988)3'
coverage = 1.000
InterPro :
IPR004171 : cAMP-dependent protein kinase inhibitor
GO :
0004862 : Molecular Function : cAMP-dependent protein kinase inhibitor activity
0006469 : Biological Process : negative regulation of protein kinase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 15, nucl 8.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007603)
HIX0007604
HIT000055609
(
BX641068
)
Representative transcript
(Conserved hypothetical protein.)
genome : 79,518,187 - 79,521,939 (3,753)
query : 1 - 3,748 (3,748/3,765)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007604)
HIX0007604
HIT000678920 (
ENST00000565862
)
(Hypothetical protein.)
genome : 79,518,187 - 79,521,940 (3,754)
query : 1 - 3,754 (3,754/3,754)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007604)
HIX0007604
HIT000013568
(
AK056954
)
(Conserved hypothetical protein.)
genome : 79,520,042 - 79,521,935 (1,894)
query : 1 - 1,894 (1,894/1,894)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 12.5, cyto 11.5, nucl 6.5,
extr_plas 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007604)
HIX0007605
HIT000205787 (
NM_016010
)
(Zinc finger C2HC domain-containing protein 1A;)
genome : 79,578,282 - 79,632,000 (53,719)
query : 1 - 3,352 (3,352/3,352)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 9, extr 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007605)
HIX0007605
HIT000109071 (
ENST00000263849
)
(Zinc finger C2HC domain-containing protein 1A;)
genome : 79,578,282 - 79,629,935 (51,654)
query : 1 - 1,287 (1,287/1,287)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 9, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007605)
HIX0007605
HIT000007985
(
AK024711
)
Representative transcript
(Zinc finger C2HC domain-containing protein 1A;)
genome : 79,578,324 - 79,629,739 (51,416)
query : 1 - 1,049 (1,049/1,065)
9 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.980;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR026319 : Zinc finger C2HC domain-containing protein
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 9, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007605)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK085187
Danio
sp. (Zebrafish) : BC055250
Bos
sp. (Cow) : BC114757
Pongo
sp. (Orangutan) : CR857612
Gallus
sp. (Chicken) : ENSGALT00000025374
Oryzias
sp. (Medaka) : ENSORLT00000008539
Takifugu
sp. (Fugu) : SINFRUT00000174401
Rattus
sp. (Rat) : XM_001058011
Macaca
sp. (Macaque) : XM_001088418
Monodelphis
sp. (Opossum) : XM_001377582
Equus
sp. (Horse) : XM_001491870
Pan
sp. (Chimpanzee) : XM_519818
Canis
sp. (Dog) : XM_855497
HIX0007605
HIT000432589
(
AK313723
)
(Zinc finger C2HC domain-containing protein 1A;)
genome : 79,578,324 - 79,629,728 (51,405)
query : 1 - 1,038 (1,038/1,038)
9 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.990;
1.000;0.994)3'
coverage = 1.000
InterPro :
IPR026319 : Zinc finger C2HC domain-containing protein
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 9, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007605)
HIX0007605
HIT000621184 (
ENST00000521873
)
(Zinc finger C2HC domain-containing protein 1A.)
genome : 79,578,324 - 79,591,625 (13,302)
query : 1 - 981 (981/981)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13, extr 4, nucl 2.5,
extr_plas 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007605)
HIX0007605
HIT000071633
(
AF151820
)
(Zinc finger C2HC domain-containing protein 1A;)
genome : 79,578,330 - 79,629,935 (51,606)
query : 1 - 1,239 (1,239/1,243)
9 exons
identity = 0.995
5'(0.986;1.000;1.000;1.000;0.980;1.000;0.990;
1.000;0.997)3'
coverage = 0.997
InterPro :
IPR026319 : Zinc finger C2HC domain-containing protein
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 9, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007605)
HIX0007605
HIT000034164
(
BC009074
)
(Zinc finger C2HC domain-containing protein 1A;)
genome : 79,578,360 - 79,629,935 (51,576)
query : 1 - 1,212 (1,212/1,227)
9 exons
identity = 0.995
5'(1.000;1.000;0.991;1.000;0.993;1.000;0.990;
1.000;0.992)3'
coverage = 1.000
InterPro :
IPR026319 : Zinc finger C2HC domain-containing protein
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 9, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007605)
HIX0007605
HIT000094163
(
BC035905
)
(Conserved hypothetical protein.)
genome : 79,578,360 - 79,580,355 (1,996)
query : 1 - 1,996 (1,996/2,070)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, cyto 5, cyto_nucl 4.83333, nucl 3.5,
cyto_pero 3.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007605)
HIX0007605
HIT000620494 (
ENST00000521176
)
(Zinc finger C2HC domain-containing protein 1A.)
genome : 79,578,364 - 79,609,740 (31,377)
query : 1 - 546 (546/546)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, nucl 11, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007605)
HIX0218104
HIT000623226 (
ENST00000523959
)
(Interleukin-7/interleukin-9 family protein.)
genome : 79,587,978 - 79,650,805 (62,828)
query : 1 - 635 (635/635)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 9, extr_plas 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218104)
HIX0007605
HIT000618664 (
ENST00000519307
)
(Zinc finger C2HC domain-containing protein 1A.)
genome : 79,609,641 - 79,629,737 (20,097)
query : 1 - 601 (601/601)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, nucl 10.5, cyto_nucl 7.5, mito 4, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007605)
HIX0218104
HIT000619180 (
ENST00000519833
)
(Interleukin-7/interleukin-9 family protein.)
genome : 79,630,135 - 79,652,317 (22,183)
query : 1 - 721 (721/721)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 8, mito 7, extr_plas 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218104)
HIX0007605
HIT000019151
(
AK094296
)
(Hypothetical short protein.)
genome : 79,630,315 - 79,631,995 (1,681)
query : 1 - 1,678 (1,678/1,678)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, plas 2, nucl 1, mito 1, E.R. 1, lyso 1,
E.R._mito 1, cysk_plas 1, cyto_plas 1, mito_nucl 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007605)
HIX0034599
HIT000264895
(
BC072451
)
Representative transcript
(Conserved hypothetical protein.)
genome : 79,635,084 - 79,636,609 (1,526)
query : 1 - 1,534 (1,534/1,575)
1 exon
identity = 0.992
3'(0.992)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, cyto_nucl 12, mito 10, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034599)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : XR_010704
HIX0034599
HIT000727750 (
NR_077236
)
(Conserved hypothetical protein.)
genome : 79,635,082 - 79,636,609 (1,528)
query : 1 - 1,528 (1,528/1,528)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, cyto_nucl 12, mito 10, cyto 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034599)
HIX0034599
HIT000619690 (
ENST00000520351
)
(Conserved hypothetical protein.)
genome : 79,636,031 - 79,636,371 (341)
query : 1 - 341 (341/341)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, cyto_nucl 12, mito 10, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034599)
HIX0007607
HIT000006914
(
AK023640
)
Representative transcript
(Conserved hypothetical protein.)
genome : 79,640,608 - 79,642,045 (1,438)
query : 1 - 1,438 (1,438/1,438)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_mito 13, mito 12, cyto 10, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007607)
HIX0218104
HIT000242256
(
AB102883
)
Representative transcript
(Interleukin-7/interleukin-9 family protein.)
genome : 79,645,948 - 79,652,311 (6,364)
query : 1 - 195 (195/195)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000226 : Interleukin-7/interleukin-9 family
IPR018049 : Interleukin-7/Interleukin-9, conserved site
GO :
0005126 : Molecular Function : cytokine receptor binding
0005576 : Cellular Component : extracellular region
0006955 : Biological Process : immune response
0008083 : Molecular Function : growth factor activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 3, cyto 2, mito 2, cyto_mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218104)
HIX0218104
HIT000640228 (
ENST00000541183
)
(Interleukin-7/interleukin-9 family protein.)
genome : 79,645,948 - 79,652,311 (6,364)
query : 1 - 195 (195/195)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 3, cyto 2, mito 2, cyto_mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218104)
HIX0218103
HIT000360393 (
ENST00000379113
)
(Interleukin-7/interleukin-9 family protein.)
genome : 79,659,263 - 79,717,758 (58,496)
query : 1 - 817 (817/817)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218103)
HIX0218103
HIT000242258
(
AB102885
)
Representative transcript
(Interleukin-7/interleukin-9 family protein.)
genome : 79,659,263 - 79,710,444 (51,182)
query : 10 - 216 (207/216)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.958
InterPro :
IPR000226 : Interleukin-7/interleukin-9 family
IPR001181 : Interleukin-7
GO :
0005126 : Molecular Function : cytokine receptor binding
0005139 : Molecular Function : interleukin-7 receptor binding
0005576 : Cellular Component : extracellular region
0006955 : Biological Process : immune response
0008083 : Molecular Function : growth factor activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218103)
HIX0208704
HIT000107646_02 (
ENST00000260045
)
(Zinc finger, C2CH-type domain containing protein.)
genome : 79,671,467 - 79,674,772 (3,306)
query : 1 - 3,300 (3,300/3,300)
1 exon
identity = 0.985
3'(0.985)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 8, mito 7.5, mito_pero 6, plas 4,
cyto 3.5, pero 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208704)
HIX0208704
HIT000619589_01 (
ENST00000520248
)
(Zinc finger, C2CH-type domain containing protein.)
genome : 79,672,377 - 79,674,666 (2,290)
query : 1 - 2,290 (2,290/2,290)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_pero 11, nucl 4, pero 3.5, plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208704)
HIX0218103
HIT000620640 (
ENST00000521323
)
(Interleukin-7 family protein.)
genome : 79,710,069 - 79,717,355 (7,287)
query : 1 - 583 (583/583)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, plas 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218103)
HIX0218103
HIT000242253
(
AB102880
)
(Interleukin-7 family protein.)
genome : 79,710,358 - 79,710,444 (87)
query : 10 - 96 (87/96)
1 exon
identity = 0.989
3'(0.989)5'
coverage = 0.906
InterPro :
IPR000226 : Interleukin-7/interleukin-9 family
IPR001181 : Interleukin-7
GO :
0005126 : Molecular Function : cytokine receptor binding
0005139 : Molecular Function : interleukin-7 receptor binding
0005576 : Cellular Component : extracellular region
0006955 : Biological Process : immune response
0008083 : Molecular Function : growth factor activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218103)
HIX0025686
HIT000056833
(
BX648186
)
Representative transcript
(Conserved hypothetical protein.)
genome : 79,749,764 - 79,752,757 (2,994)
query : 1 - 3,002 (3,002/3,055)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, plas 7, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025686)
HIX0025686
HIT000678382 (
ENST00000565297
)
(Conserved hypothetical protein.)
genome : 79,749,764 - 79,752,757 (2,994)
query : 1 - 2,994 (2,994/2,994)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 8.5, mito_pero 5.5, cyto 2.5,
cyto_nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025686)
HIX0208682
HIT000619330 (
ENST00000519983
)
(Hypothetical short protein.)
genome : 80,209,952 - 80,226,706 (16,755)
query : 1 - 633 (633/633)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, extr 8, cyto 8, mito_nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208682)
HIX0208838
HIT000621342 (
ENST00000522035
)
(Conserved hypothetical protein.)
genome : 80,432,380 - 80,432,884 (505)
query : 1 - 505 (505/505)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208838)
HIX0208323
HIT000568021 (
ENST00000463217
)
(Ribosomal protein L3 family protein.)
genome : 80,483,388 - 80,484,570 (1,183)
query : 1 - 1,183 (1,183/1,183)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 16, cyto 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208323)
HIX0007608
HIT000203569 (
NM_007029
)
(Stathmin family protein.)
genome : 80,523,049 - 80,578,410 (55,362)
query : 1 - 2,223 (2,223/2,232)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13, mito 5, nucl 2.5,
E.R._mito 2.5, mito_pero 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007608)
HIX0007608
HIT000656481 (
NM_001199214
)
(Stathmin family protein.)
genome : 80,523,049 - 80,578,410 (55,362)
query : 1 - 2,305 (2,305/2,314)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 10.5, extr 10, nucl 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007608)
HIX0007608
HIT000103487 (
ENST00000220876
)
(Stathmin family protein.)
genome : 80,523,049 - 80,578,410 (55,362)
query : 1 - 2,223 (2,223/2,223)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13, mito 5, nucl 2.5,
E.R._mito 2.5, mito_pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007608)
HIX0007608
HIT000101560
(
D50375
)
(Stathmin-2; Superior cervical ganglion-10 protein; Protein SCG10;)
genome : 80,523,314 - 80,577,224 (53,911)
query : 1 - 772 (772/772)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;0.995;1.000)3'
coverage = 1.000
InterPro :
IPR000956 : Stathmin family
IPR026729 : Stathmin-2
GO :
0031110 : Biological Process : regulation of microtubule polymerization or depolymerization
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13, mito 5, nucl 2.5,
E.R._mito 2.5, mito_pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007608)
HIX0007608
HIT000494124
(
AK299500
)
(Stathmin-2; Superior cervical ganglion-10 protein; Protein SCG10;)
genome : 80,523,340 - 80,577,225 (53,886)
query : 1 - 627 (627/640)
5 exons
identity = 0.995
5'(1.000;1.000;1.000;0.976;1.000)3'
coverage = 1.000
InterPro :
IPR000956 : Stathmin family
GO :
0031110 : Biological Process : regulation of microtubule polymerization or depolymerization
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto 10.5, cyto_nucl 10.5, nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007608)
HIX0007608
HIT000492218
(
AK297594
)
(Stathmin-2; Superior cervical ganglion-10 protein; Protein SCG10;)
genome : 80,523,356 - 80,578,043 (54,688)
query : 2 - 1,517 (1,516/1,517)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR000956 : Stathmin family
IPR026729 : Stathmin-2
GO :
0031110 : Biological Process : regulation of microtubule polymerization or depolymerization
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 13, mito 5, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007608)
HIX0007608
HIT000427423
(
AK308557
)
(Stathmin-2 isoform 1.)
genome : 80,523,366 - 80,577,445 (54,080)
query : 1 - 1,039 (1,039/1,039)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR000956 : Stathmin family
IPR026729 : Stathmin-2
GO :
0031110 : Biological Process : regulation of microtubule polymerization or depolymerization
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 12.5, extr 8, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007608)
HIX0007608
HIT000492109
(
AK297485
)
(Stathmin-2; Superior cervical ganglion-10 protein; Protein SCG10;)
genome : 80,523,368 - 80,578,394 (55,027)
query : 1 - 942 (942/942)
4 exons
identity = 0.988
5'(1.000;1.000;1.000;0.981)3'
coverage = 1.000
InterPro :
IPR000956 : Stathmin family
IPR026729 : Stathmin-2
GO :
0031110 : Biological Process : regulation of microtubule polymerization or depolymerization
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 9.5, cyto_nucl 8, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007608)
HIX0007608
HIT000425534
(
AK292737
)
Representative transcript
(Stathmin-2; Superior cervical ganglion-10 protein; Protein SCG10;)
genome : 80,523,377 - 80,577,552 (54,176)
query : 1 - 1,036 (1,036/1,036)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR000956 : Stathmin family
IPR026729 : Stathmin-2
GO :
0031110 : Biological Process : regulation of microtubule polymerization or depolymerization
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13, mito 5, nucl 2.5,
E.R._mito 2.5, mito_pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007608)
HIX0007608
HIT000032741
(
BC006302
)
(Stathmin-2; Superior cervical ganglion-10 protein; Protein SCG10;)
genome : 80,523,380 - 80,577,225 (53,846)
query : 1 - 707 (707/724)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000956 : Stathmin family
IPR026729 : Stathmin-2
GO :
0031110 : Biological Process : regulation of microtubule polymerization or depolymerization
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13, mito 5, nucl 2.5,
E.R._mito 2.5, mito_pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007608)
HIX0007608
HIT000617497 (
ENST00000518111
)
(Stathmin family protein.)
genome : 80,523,387 - 80,577,225 (53,839)
query : 1 - 782 (782/799)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 10.5, extr 10, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007608)
HIX0007608
HIT000217141
(
S82024
)
(Stathmin-2; Superior cervical ganglion-10 protein; Protein SCG10;)
genome : 80,523,402 - 80,577,226 (53,825)
query : 1 - 696 (696/696)
5 exons
identity = 0.973
5'(0.979;1.000;0.994;1.000;0.911)3'
coverage = 1.000
InterPro :
IPR000956 : Stathmin family
IPR026729 : Stathmin-2
GO :
0031110 : Biological Process : regulation of microtubule polymerization or depolymerization
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13, mito 5, nucl 2.5,
E.R._mito 2.5, mito_pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007608)
HIX0007608
HIT000617868 (
ENST00000518491
)
(Stathmin family protein.)
genome : 80,523,970 - 80,577,116 (53,147)
query : 1 - 585 (585/585)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, extr 7, mito 4, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007608)
HIX0007608
HIT000427996
(
AK309130
)
(Stathmin-2; Superior cervical ganglion-10 protein; Protein SCG10;)
genome : 80,525,707 - 80,577,311 (51,605)
query : 1 - 1,012 (1,012/1,012)
5 exons
identity = 0.998
5'(0.997;1.000;1.000;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR000956 : Stathmin family
IPR026729 : Stathmin-2
GO :
0031110 : Biological Process : regulation of microtubule polymerization or depolymerization
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, extr 7, mito 4, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007608)
HIX0007608
HIT000266785
(
BT020034
)
(Stathmin-2; Superior cervical ganglion-10 protein; Protein SCG10;)
genome : 80,549,036 - 80,577,107 (28,072)
query : 19 - 538 (520/540)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.963
InterPro :
IPR000956 : Stathmin family
IPR026729 : Stathmin-2
GO :
0031110 : Biological Process : regulation of microtubule polymerization or depolymerization
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13, mito 5, nucl 2.5,
E.R._mito 2.5, mito_pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007608)
HIX0007608
HIT000267683
(
CR456833
)
(Stathmin-2; Superior cervical ganglion-10 protein; Protein SCG10;)
genome : 80,549,036 - 80,577,105 (28,070)
query : 19 - 536 (518/540)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.959
InterPro :
IPR000956 : Stathmin family
IPR026729 : Stathmin-2
GO :
0031110 : Biological Process : regulation of microtubule polymerization or depolymerization
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13, mito 5, nucl 2.5,
E.R._mito 2.5, mito_pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007608)
HIX0007608
HIT000017054
(
AK092187
)
(Stathmin isoform b.)
genome : 80,553,605 - 80,578,387 (24,783)
query : 98 - 1,810 (1,713/1,810)
3 exons
identity = 0.974
5'(0.766;1.000;0.999)3'
coverage = 0.946
InterPro :
IPR000956 : Stathmin family
GO :
0031110 : Biological Process : regulation of microtubule polymerization or depolymerization
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 15.5, cyto 14.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007608)
HIX0007608
HIT000024440
(
AL110174
)
(Stathmin family protein.)
genome : 80,567,175 - 80,578,392 (11,218)
query : 1 - 1,468 (1,468/1,488)
2 exons
identity = 0.997
5'(1.000;0.996)3'
coverage = 1.000
InterPro :
IPR000956 : Stathmin family
IPR026729 : Stathmin-2
GO :
0031110 : Biological Process : regulation of microtubule polymerization or depolymerization
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, extr 6, nucl 3, extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007608)
HIX0007608
HIT000016203
(
AK091336
)
(Hypothetical protein.)
genome : 80,576,326 - 80,578,391 (2,066)
query : 1 - 2,066 (2,066/2,066)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, extr 5, nucl 4, cyto 4, cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007608)
HIX0218119
HIT000426488
(
AK307622
)
Representative transcript
(Hairy/enhancer-of-split related with YRPW motif protein 1; Cardiovascular helix-loop-helix factor 2; CHF-2; Class B basic helix-loop-helix protein 31; bHLHb31; HES-related repressor protein 1; Hairy and enhancer of split-related protein 1; HESR-1; Hairy-related transcription factor 1; HRT-1; hHRT1;)
genome : 80,676,729 - 80,678,728 (2,000)
query : 1 - 1,405 (1,405/1,405)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
InterPro :
IPR003650 : Orange
GO :
0003677 : Molecular Function : DNA binding
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 15.5, cyto 9.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218119)
HIX0218119
HIT000532997 (
ENST00000435063
)
(Orange domain containing protein.)
genome : 80,676,729 - 80,678,728 (2,000)
query : 1 - 1,405 (1,405/1,405)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 15.5, cyto 9.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218119)
HIX0218119
HIT000488270
(
AK293646
)
(Hairy/enhancer-of-split related with YRPW motif protein 1; Cardiovascular helix-loop-helix factor 2; CHF-2; Class B basic helix-loop-helix protein 31; bHLHb31; HES-related repressor protein 1; Hairy and enhancer of split-related protein 1; HESR-1; Hairy-related transcription factor 1; HRT-1; hHRT1;)
genome : 80,676,955 - 80,678,710 (1,756)
query : 1 - 1,324 (1,324/1,324)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
InterPro :
IPR003650 : Orange
GO :
0003677 : Molecular Function : DNA binding
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 17, cyto 7.5, extr 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218119)
HIX0218119
HIT000623243 (
ENST00000523976
)
(Orange domain containing protein.)
genome : 80,676,955 - 80,678,710 (1,756)
query : 1 - 1,325 (1,325/1,325)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 17, cyto 7.5, extr 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218119)
HIX0218151
HIT000620433 (
ENST00000521111
)
(Myc-type, basic helix-loop-helix (bHLH) domain containing protein.)
genome : 80,679,002 - 80,680,019 (1,018)
query : 1 - 612 (612/612)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 14.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218151)
HIX0218151
HIT000618440 (
ENST00000519075
)
(Myc-type, basic helix-loop-helix (bHLH) domain containing protein.)
genome : 80,679,169 - 80,679,995 (827)
query : 1 - 701 (701/701)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, mito 11, cyto 3, E.R. 2, cyto_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218151)
HIX0218151
HIT000622808 (
ENST00000523531
)
(Myc-type, basic helix-loop-helix (bHLH) domain containing protein.)
genome : 80,679,245 - 80,680,092 (848)
query : 1 - 568 (568/568)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 15.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218151)
HIX0019750
HIT000011946
(
AK055332
)
Representative transcript
(Conserved hypothetical protein.)
genome : 80,681,616 - 80,783,972 (102,357)
query : 2 - 2,119 (2,118/2,129)
6 exons
identity = 0.994
3'(0.992;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto_nucl 6.5, nucl 5.5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019750)
HIX0019750
HIT000603097 (
ENST00000502766
)
(Conserved hypothetical protein.)
genome : 80,681,616 - 80,783,972 (102,357)
query : 1 - 2,117 (2,117/2,126)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, extr 3, cyto_nucl 2, nucl 1.5, cyto 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019750)
HIX0019750
HIT000616765 (
ENST00000517365
)
(Hypothetical short protein.)
genome : 80,732,804 - 80,783,994 (51,191)
query : 1 - 498 (498/498)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019750)
HIX0007610
HIT000111459 (
ENST00000276585
)
(28S ribosomal protein S28, mitochondrial; MRP-S28; S28mt; 28S ribosomal protein S35, mitochondrial; MRP-S35; S35mt; Precursor;)
genome : 80,830,952 - 80,942,506 (111,555)
query : 1 - 850 (850/850)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007610)
HIX0007610
HIT000009780
(
AK026506
)
(28S ribosomal protein S28, mitochondrial; MRP-S28; S28mt; 28S ribosomal protein S35, mitochondrial; MRP-S35; S35mt; Precursor;)
genome : 80,831,095 - 80,942,505 (111,411)
query : 10 - 715 (706/792)
3 exons
identity = 0.999
3'(1.000;0.995;1.000)5'
coverage = 0.987
InterPro :
IPR019375 : Ribosomal protein S28, mitochondrial
IPR022967 : RNA-binding domain, S1
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007610)
HIX0007610
HIT000330849
(
AK223069
)
(28S ribosomal protein S28, mitochondrial; MRP-S28; S28mt; 28S ribosomal protein S35, mitochondrial; MRP-S35; S35mt; Precursor;)
genome : 80,831,095 - 80,942,505 (111,411)
query : 10 - 715 (706/791)
3 exons
identity = 0.999
3'(1.000;0.995;1.000)5'
coverage = 0.987
InterPro :
IPR019375 : Ribosomal protein S28, mitochondrial
IPR022967 : RNA-binding domain, S1
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007610)
HIX0007610
HIT000034838
(
BC010150
)
Representative transcript
(28S ribosomal protein S28, mitochondrial; MRP-S28; S28mt; 28S ribosomal protein S35, mitochondrial; MRP-S35; S35mt; Precursor;)
genome : 80,831,095 - 80,942,506 (111,412)
query : 1 - 707 (707/724)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR019375 : Ribosomal protein S28, mitochondrial
IPR022967 : RNA-binding domain, S1
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007610)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK005229
Rattus
sp. (Rat) : AY383686
Bos
sp. (Cow) : BC112719
Danio
sp. (Zebrafish) : BC125840
Gallus
sp. (Chicken) : BX932347
Pongo
sp. (Orangutan) : ENSPPYT00000021809
Macaca
sp. (Macaque) : XM_001090591
Pan
sp. (Chimpanzee) : XM_001167623
Monodelphis
sp. (Opossum) : XM_001377430
Equus
sp. (Horse) : XM_001915132
Canis
sp. (Dog) : XM_535109
HIX0007610
HIT000204471 (
NM_014018
)
(28S ribosomal protein S28, mitochondrial; MRP-S28; S28mt; 28S ribosomal protein S35, mitochondrial; MRP-S35; S35mt; Precursor;)
genome : 80,831,095 - 80,942,506 (111,412)
query : 1 - 707 (707/724)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, cyto 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007610)
HIX0007610
HIT000001778
(
AF070663
)
(28S ribosomal protein S28, mitochondrial; MRP-S28; S28mt; 28S ribosomal protein S35, mitochondrial; MRP-S35; S35mt; Precursor;)
genome : 80,831,090 - 80,942,489 (111,400)
query : 2 - 696 (695/700)
3 exons
identity = 0.999
3'(0.997;1.000;1.000)5'
coverage = 0.993
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007610)
HIX0007610
HIT000618742 (
ENST00000519386
)
(28S ribosomal protein S28, mitochondrial; MRP-S28; S28mt; 28S ribosomal protein S35, mitochondrial; MRP-S35; S35mt; Precursor;)
genome : 80,831,090 - 80,942,074 (110,985)
query : 1 - 555 (555/555)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007610)
HIX0007610
HIT000622223 (
ENST00000522938
)
(28S ribosomal protein S28, mitochondrial; MRP-S28; S28mt; 28S ribosomal protein S35, mitochondrial; MRP-S35; S35mt; Precursor;)
genome : 80,831,090 - 80,915,417 (84,328)
query : 1 - 657 (657/657)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, nucl 10, cyto_nucl 10, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007610)
HIX0007610
HIT000620751 (
ENST00000521434
)
(28S ribosomal protein S28, mitochondrial; MRP-S28; S28mt; 28S ribosomal protein S35, mitochondrial; MRP-S35; S35mt; Precursor;)
genome : 80,831,175 - 80,942,147 (110,973)
query : 1 - 585 (585/585)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007610)
HIX0007610
HIT000620920 (
ENST00000521605
)
(28S ribosomal protein S28, mitochondrial; MRP-S28; S28mt; 28S ribosomal protein S35, mitochondrial; MRP-S35; S35mt; Precursor;)
genome : 80,831,201 - 80,942,524 (111,324)
query : 1 - 437 (437/437)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto_nucl 3.5, extr 3, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007610)
HIX0007610
HIT000434605
(
AK315739
)
(28S ribosomal protein S28, mitochondrial; MRP-S28; S28mt; 28S ribosomal protein S35, mitochondrial; MRP-S35; S35mt; Precursor;)
genome : 80,831,215 - 80,942,505 (111,291)
query : 2 - 587 (586/587)
3 exons
identity = 0.998
3'(1.000;1.000;0.996)5'
coverage = 0.998
InterPro :
IPR019375 : Ribosomal protein S28, mitochondrial
IPR022967 : RNA-binding domain, S1
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007610)
HIX0007610
HIT000618483 (
ENST00000519120
)
(28S ribosomal protein S28, mitochondrial; MRP-S28; S28mt; 28S ribosomal protein S35, mitochondrial; MRP-S35; S35mt; Precursor;)
genome : 80,831,223 - 80,942,199 (110,977)
query : 1 - 403 (403/403)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007610)
HIX0007610
HIT000620269 (
ENST00000520946
)
(28S ribosomal protein S28, mitochondrial; MRP-S28; S28mt; Precursor;)
genome : 80,831,267 - 80,942,209 (110,943)
query : 1 - 411 (411/411)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto_mito 11.8333, extr 10, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007610)
HIX0007610
HIT000617654 (
ENST00000518271
)
(28S ribosomal protein S28, mitochondrial; MRP-S28; S28mt; 28S ribosomal protein S35, mitochondrial; MRP-S35; S35mt; Precursor;)
genome : 80,831,360 - 80,942,467 (111,108)
query : 1 - 487 (487/487)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto_mito 14, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007610)
HIX0007610
HIT000617753 (
ENST00000518371
)
(28S ribosomal protein S28, mitochondrial; MRP-S28; S28mt; 28S ribosomal protein S35, mitochondrial; MRP-S35; S35mt; Precursor;)
genome : 80,870,217 - 80,915,383 (45,167)
query : 1 - 604 (604/604)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, extr 11, cyto_nucl 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007610)
HIX0007610
HIT000622272 (
ENST00000522987
)
(28S ribosomal protein S28, mitochondrial; MRP-S28; S28mt; 28S ribosomal protein S35, mitochondrial; MRP-S35; S35mt; Precursor;)
genome : 80,870,507 - 80,942,489 (71,983)
query : 1 - 487 (487/487)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19.5, mito_nucl 13.5, cyto_nucl 6.83333, nucl 6,
cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007610)
HIX0007611
HIT000201796 (
NM_005079
)
(Tumor protein D52 isoform 3.)
genome : 80,947,103 - 81,083,836 (136,734)
query : 1 - 3,961 (3,961/3,966)
6 exons
identity = 0.999
3'(1.000;0.925;1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14.5, extr 6, nucl 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0007611
HIT000365824 (
NM_001025253
)
(Tumor protein D52 isoform 2.)
genome : 80,947,103 - 81,083,836 (136,734)
query : 1 - 4,030 (4,030/4,035)
8 exons
identity = 0.999
3'(1.000;0.925;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 15, extr 5, nucl 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0007611
HIT000365823 (
NM_001025252
)
(Tumor protein D52; Protein N8;)
genome : 80,947,103 - 80,993,010 (45,908)
query : 1 - 4,245 (4,245/4,250)
6 exons
identity = 0.999
3'(1.000;0.925;1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 12, extr 10, nucl 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0007611
HIT000360376 (
ENST00000379096
)
(Tumor protein D52 isoform 3.)
genome : 80,947,103 - 81,083,793 (136,691)
query : 1 - 3,918 (3,918/3,918)
6 exons
identity = 0.999
3'(1.000;0.925;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14.5, extr 6, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0007611
HIT000218479
(
U18914
)
(Tumor protein D52 isoform 3.)
genome : 80,947,749 - 81,083,769 (136,021)
query : 1 - 3,247 (3,247/3,247)
6 exons
identity = 0.998
3'(1.000;0.925;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007327 : Tumour protein D52
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14.5, extr 6, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0007611
HIT000618306 (
ENST00000518937
)
(Tumor protein D52 isoform 2.)
genome : 80,948,335 - 81,083,894 (135,560)
query : 1 - 2,856 (2,856/2,856)
8 exons
identity = 0.999
3'(1.000;0.925;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 15, extr 5, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0007611
HIT000038275
(
BC018117
)
(Tumor protein D52 isoform 3.)
genome : 80,948,825 - 81,083,765 (134,941)
query : 1 - 2,168 (2,168/2,201)
6 exons
identity = 0.998
3'(1.000;0.925;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007327 : Tumour protein D52
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14.5, extr 6, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0007611
HIT000648080
(
GQ499324
)
(Tumor protein D52; Protein N8;)
genome : 80,948,826 - 80,993,051 (44,226)
query : 1 - 2,632 (2,632/2,662)
8 exons
identity = 0.998
3'(1.000;0.925;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.999
InterPro :
IPR007327 : Tumour protein D52
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 13.5, extr 8, nucl 4, extr_plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0007611
HIT000648081
(
GQ499325
)
(Tumor protein D52 isoform 1.)
genome : 80,948,826 - 80,993,051 (44,226)
query : 1 - 2,605 (2,605/2,635)
7 exons
identity = 0.998
3'(1.000;0.925;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR007327 : Tumour protein D52
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 13.5, extr 8, nucl 4, extr_plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0007611
HIT000648082
(
GQ499326
)
(Tumor protein D52 isoform 3.)
genome : 80,948,826 - 80,993,051 (44,226)
query : 1 - 2,590 (2,590/2,620)
7 exons
identity = 0.998
3'(1.000;0.925;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR007327 : Tumour protein D52
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 12, extr 10, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0007611
HIT000648083
(
GQ499327
)
Representative transcript
(Tumor protein D52; Protein N8;)
genome : 80,948,826 - 80,993,051 (44,226)
query : 1 - 2,563 (2,563/2,593)
6 exons
identity = 0.998
3'(1.000;0.925;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR007327 : Tumour protein D52
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 12, extr 10, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB172785
Mus
sp. (Mouse) : AK032111
Bos
sp. (Cow) : BC102644
Danio
sp. (Zebrafish) : BC133913
Gallus
sp. (Chicken) : CR390487
Pongo
sp. (Orangutan) : CR926001
Equus
sp. (Horse) : ENSECAT00000014729
Oryzias
sp. (Medaka) : ENSORLT00000016243
Tetraodon
sp. (Tetraodon) : GSTENT00033000001
Rattus
sp. (Rat) : XM_001054008
Pan
sp. (Chimpanzee) : XM_001162922
Monodelphis
sp. (Opossum) : XM_001377421
Canis
sp. (Dog) : XM_535110
HIX0007611
HIT000648084
(
GQ499328
)
(Tumor protein D52; Protein N8;)
genome : 80,948,826 - 80,993,051 (44,226)
query : 1 - 2,702 (2,702/2,732)
9 exons
identity = 0.999
3'(1.000;0.925;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.999
InterPro :
IPR007327 : Tumour protein D52
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 15, nucl 6, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0007611
HIT000073798
(
AF202897
)
(Tumor protein D52; Protein N8;)
genome : 80,948,826 - 80,993,010 (44,185)
query : 1 - 2,522 (2,522/2,552)
6 exons
identity = 0.998
3'(1.000;0.925;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR007327 : Tumour protein D52
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 12, extr 10, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0007611
HIT000055383
(
BX640835
)
(Tumor protein D52; Protein N8;)
genome : 80,948,827 - 80,992,849 (44,023)
query : 2 - 2,361 (2,360/2,383)
6 exons
identity = 0.998
3'(0.999;0.925;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR007327 : Tumour protein D52
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 12, extr 10, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0007611
HIT000217149
(
S82081
)
(Tumor protein D52 isoform 3.)
genome : 80,948,827 - 81,083,771 (134,945)
query : 1 - 2,172 (2,172/2,185)
6 exons
identity = 0.997
3'(0.998;0.925;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR007327 : Tumour protein D52
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14.5, extr 6, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0007611
HIT000616826 (
ENST00000517427
)
(Tumor protein D52 isoform 3.)
genome : 80,948,820 - 80,993,051 (44,232)
query : 1 - 2,596 (2,596/2,596)
7 exons
identity = 0.998
3'(1.000;0.925;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 12, extr 10, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0007611
HIT000619863 (
ENST00000520527
)
(Tumor protein D52; Protein N8;)
genome : 80,948,820 - 80,993,051 (44,232)
query : 1 - 2,638 (2,638/2,638)
8 exons
identity = 0.998
3'(1.000;0.925;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 13.5, extr 8, nucl 4, extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0007611
HIT000546667 (
ENST00000448733
)
(Tumor protein D52 isoform 1.)
genome : 80,948,824 - 80,993,051 (44,228)
query : 1 - 2,607 (2,607/2,607)
7 exons
identity = 0.998
3'(1.000;0.925;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 13.5, extr 8, nucl 4, extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0007611
HIT000360377 (
ENST00000379097
)
(Tumor protein D52; Protein N8;)
genome : 80,948,826 - 80,993,051 (44,226)
query : 1 - 2,563 (2,563/2,563)
6 exons
identity = 0.998
3'(1.000;0.925;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 12, extr 10, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0007611
HIT000616859 (
ENST00000517462
)
(Tumor protein D52; Protein N8;)
genome : 80,948,826 - 80,993,051 (44,226)
query : 1 - 2,702 (2,702/2,702)
9 exons
identity = 0.999
3'(1.000;0.925;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 15, nucl 6, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0007611
HIT000013689
(
AK057075
)
(Tumor protein D52; Protein N8;)
genome : 80,948,826 - 80,992,846 (44,021)
query : 3 - 2,366 (2,364/2,366)
7 exons
identity = 0.994
3'(1.000;0.925;1.000;1.000;1.000;0.825;0.997)5'
coverage = 0.999
InterPro :
IPR007327 : Tumour protein D52
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 5, mito 4, cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0007611
HIT000618660 (
ENST00000519303
)
(Tumor protein D52 isoform 2.)
genome : 80,949,542 - 81,083,435 (133,894)
query : 1 - 1,594 (1,594/1,594)
8 exons
identity = 0.997
3'(1.000;0.925;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, mito 6, extr 5, cyto_mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0007611
HIT000427849
(
AK308983
)
(Tumor protein D52 isoform 2.)
genome : 80,949,542 - 81,083,345 (133,804)
query : 3 - 1,506 (1,504/1,506)
8 exons
identity = 0.997
3'(1.000;0.925;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.999
InterPro :
IPR007327 : Tumour protein D52
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 12, extr 8, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0007611
HIT000490092
(
AK295468
)
(Tumor protein D52 isoform 2.)
genome : 80,949,636 - 81,083,761 (134,126)
query : 1 - 1,422 (1,422/1,422)
8 exons
identity = 0.997
3'(1.000;0.925;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR007327 : Tumour protein D52
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 15, extr 5, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0007611
HIT000491239
(
AK296615
)
(Tumor protein D52; Protein N8;)
genome : 80,949,801 - 80,992,788 (42,988)
query : 1 - 1,325 (1,325/1,325)
6 exons
identity = 0.997
3'(1.000;0.925;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007327 : Tumour protein D52
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 12, extr 10, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0007611
HIT000331411
(
AK223631
)
(Tumor protein D52 isoform 3.)
genome : 80,949,877 - 81,083,793 (133,917)
query : 1 - 1,144 (1,144/1,144)
6 exons
identity = 0.996
3'(1.000;0.925;1.000;1.000;0.991;1.000)5'
coverage = 1.000
InterPro :
IPR007327 : Tumour protein D52
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 13.5, extr 7, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0007611
HIT000622676 (
ENST00000523395
)
(Tumor protein D52 isoform 3.)
genome : 80,949,912 - 80,963,651 (13,740)
query : 1 - 773 (773/773)
3 exons
identity = 0.995
3'(1.000;0.925;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0007611
HIT000622476 (
ENST00000523193
)
(Tumor protein D52 isoform 2.)
genome : 80,949,976 - 80,964,094 (14,119)
query : 1 - 877 (877/877)
3 exons
identity = 0.995
3'(1.000;0.925;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11.5, extr 8, mito 8, cyto_nucl 8, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0007611
HIT000622601 (
ENST00000523319
)
(Tumor protein D52 isoform 1.)
genome : 80,950,101 - 80,976,905 (26,805)
query : 1 - 863 (863/863)
5 exons
identity = 0.995
3'(1.000;0.925;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto 3.5, cyto_nucl 3.5, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0007611
HIT000620671 (
ENST00000521354
)
(Conserved hypothetical protein.)
genome : 80,950,118 - 81,083,791 (133,674)
query : 1 - 785 (785/785)
5 exons
identity = 0.995
3'(1.000;0.925;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 8.5, cyto_nucl 8.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0007611
HIT000620202 (
ENST00000520877
)
(Tumor protein D52 isoform 2.)
genome : 80,950,121 - 80,963,636 (13,516)
query : 1 - 576 (576/576)
4 exons
identity = 0.993
3'(1.000;0.925;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0007611
HIT000620933 (
ENST00000521618
)
(Tumor protein D52 isoform 2.)
genome : 80,950,183 - 80,955,146 (4,964)
query : 1 - 580 (580/580)
2 exons
identity = 0.993
3'(1.000;0.986)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18.5, mito 10, extr_plas 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0007611
HIT000432001
(
AK313135
)
(Tumor protein D52 isoform 3.)
genome : 80,950,351 - 81,083,738 (133,388)
query : 1 - 615 (615/615)
6 exons
identity = 0.994
3'(1.000;0.925;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007327 : Tumour protein D52
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14.5, extr 6, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0007611
HIT000266495
(
BT019444
)
(Tumor protein D52 isoform 3.)
genome : 80,950,353 - 80,976,830 (26,478)
query : 18 - 553 (536/555)
5 exons
identity = 0.993
3'(1.000;0.925;1.000;1.000;1.000)5'
coverage = 0.966
InterPro :
IPR007327 : Tumour protein D52
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14.5, extr 6, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0007611
HIT000268903
(
CR542034
)
(Tumor protein D52 isoform 3.)
genome : 80,950,351 - 80,976,830 (26,480)
query : 18 - 555 (538/555)
5 exons
identity = 0.991
3'(1.000;0.925;0.990;1.000;1.000)5'
coverage = 0.969
InterPro :
IPR007327 : Tumour protein D52
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14.5, extr 6, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0007611
HIT000268933
(
CR542064
)
(Tumor protein D52 isoform 3.)
genome : 80,950,354 - 80,976,830 (26,477)
query : 18 - 552 (535/552)
5 exons
identity = 0.993
3'(1.000;0.925;1.000;1.000;1.000)5'
coverage = 0.969
InterPro :
IPR007327 : Tumour protein D52
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14.5, extr 6, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0007611
HIT000617893 (
ENST00000518517
)
(Tumor protein D52 isoform 2.)
genome : 80,950,420 - 81,083,706 (133,287)
query : 1 - 584 (584/584)
7 exons
identity = 0.993
3'(1.000;0.925;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, cyto_nucl 12, nucl 10, extr 5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0007611
HIT000623458 (
ENST00000524194
)
(Conserved hypothetical protein.)
genome : 80,950,437 - 80,965,665 (15,229)
query : 1 - 334 (334/334)
4 exons
identity = 0.988
3'(1.000;0.925;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 10.5, cyto_nucl 9.83333, cyto 6,
cyto_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0007612
HIT000006063
(
AK022789
)
Representative transcript
(Conserved hypothetical protein.)
genome : 80,951,667 - 80,954,017 (2,351)
query : 1 - 2,351 (2,351/2,351)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, mito 10, extr_plas 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007612)
HIX0007611
HIT000620558 (
ENST00000521241
)
(Tumor protein D52 isoform 2.)
genome : 80,954,842 - 81,083,808 (128,967)
query : 1 - 719 (719/723)
8 exons
identity = 0.993
3'(0.922;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0007611
HIT000616844 (
ENST00000517445
)
(Tumor protein D52 isoform 2.)
genome : 80,954,855 - 80,965,588 (10,734)
query : 1 - 461 (461/461)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, extr 9, mito 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0007611
HIT000623025 (
ENST00000523753
)
(Tumor protein D52 isoform 2.)
genome : 80,956,405 - 81,083,743 (127,339)
query : 1 - 587 (587/587)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 9, cyto_nucl 8.5, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0007611
HIT000621662 (
ENST00000522364
)
(Tumor protein D52 isoform 2.)
genome : 80,963,713 - 80,992,849 (29,137)
query : 1 - 716 (716/716)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14, extr 7, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0007611
HIT000618609 (
ENST00000519250
)
(Tumor protein D52 isoform 1.)
genome : 80,963,779 - 81,143,467 (179,689)
query : 1 - 585 (585/585)
5 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11.5, nucl 7.5, mito 6, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0007611
HIT000617877 (
ENST00000518500
)
(Tumor protein D52 isoform 3.)
genome : 80,965,281 - 80,976,787 (11,507)
query : 1 - 460 (460/460)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 11.5, extr 9, nucl 4.5,
extr_plas 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0007611
HIT000620121 (
ENST00000520795
)
(Tumor protein D52 isoform 3.)
genome : 80,965,514 - 81,083,618 (118,105)
query : 1 - 445 (445/445)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 8.5, nucl 6, extr_plas 6, E.R._mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0007611
HIT000620071 (
ENST00000520741
)
(Tumor protein D52 isoform 1.)
genome : 80,976,698 - 80,992,848 (16,151)
query : 1 - 430 (430/430)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 13.5, cyto 9.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0007611
HIT000620876 (
ENST00000521561
)
(Activating molecule in BECN1-regulated autophagy protein 1 isoform 1.)
genome : 80,976,710 - 81,071,122 (94,413)
query : 1 - 570 (570/570)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10, extr 9, cyto_nucl 8.66667, cyto 6.5,
nucl 5.5, cyto_pero 5.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0007611
HIT000623054 (
ENST00000523783
)
(Conserved hypothetical protein.)
genome : 80,979,127 - 80,992,631 (13,505)
query : 1 - 548 (548/548)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0208866
HIT000621788 (
ENST00000522494
)
(Hypothetical short protein.)
genome : 81,035,087 - 81,039,905 (4,819)
query : 1 - 364 (364/364)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 11, extr 10, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208866)
HIX0007611
HIT000622841 (
ENST00000523564
)
(Conserved hypothetical protein.)
genome : 81,089,892 - 81,130,765 (40,874)
query : 1 - 480 (480/480)
3 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0007611
HIT000619381 (
ENST00000520035
)
(Conserved hypothetical protein.)
genome : 81,090,228 - 81,143,407 (53,180)
query : 1 - 462 (462/462)
3 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, extr 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0007611
HIT000714683 (
ENST00000602950
)
(Hypothetical short protein.)
genome : 81,095,256 - 81,143,454 (48,199)
query : 1 - 340 (340/340)
3 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007611)
HIX0025568
HIT000053208
(
BC047698
)
Representative transcript
(Interleukin-7; IL-7; Precursor;)
genome : 79,645,008 - 79,717,746 (72,739)
query : 1 - 2,063 (2,063/2,125)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000226 : Interleukin-7/interleukin-9 family
IPR001181 : Interleukin-7
IPR018049 : Interleukin-7/Interleukin-9, conserved site
GO :
0005126 : Molecular Function : cytokine receptor binding
0005139 : Molecular Function : interleukin-7 receptor binding
0005576 : Cellular Component : extracellular region
0006955 : Biological Process : immune response
0008083 : Molecular Function : growth factor activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025568)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AF367210
Gallus
sp. (Chicken) : AJ852017
Mus
sp. (Mouse) : AK052452
Bos
sp. (Cow) : BC142466
Canis
sp. (Dog) : DQ845341
Equus
sp. (Horse) : ENSECAT00000022041
Macaca
sp. (Macaque) : ENSMMUT00000002348
Pongo
sp. (Orangutan) : ENSPPYT00000021806
Pan
sp. (Chimpanzee) : XM_001166852
HIX0025568
HIT000092680
(
BC032487
)
(Interleukin-7; IL-7; Precursor;)
genome : 79,645,005 - 79,717,686 (72,682)
query : 1 - 1,949 (1,949/1,987)
6 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000226 : Interleukin-7/interleukin-9 family
IPR001181 : Interleukin-7
GO :
0005126 : Molecular Function : cytokine receptor binding
0005139 : Molecular Function : interleukin-7 receptor binding
0005576 : Cellular Component : extracellular region
0006955 : Biological Process : immune response
0008083 : Molecular Function : growth factor activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025568)
HIX0025568
HIT000197890 (
NM_000880
)
(Interleukin-7; IL-7; Precursor;)
genome : 79,645,008 - 79,717,758 (72,751)
query : 1 - 2,075 (2,075/2,089)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025568)
HIX0025568
HIT000656712 (
NM_001199886
)
(Interleukin-7 isoform 2 precursor.)
genome : 79,645,008 - 79,717,758 (72,751)
query : 1 - 1,943 (1,943/1,957)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025568)
HIX0025568
HIT000656713 (
NM_001199887
)
(Interleukin-7 isoform 3 precursor.)
genome : 79,645,008 - 79,717,758 (72,751)
query : 1 - 2,021 (2,021/2,035)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025568)
HIX0025568
HIT000656714 (
NM_001199888
)
(Interleukin-7; IL-7; Precursor;)
genome : 79,645,008 - 79,717,758 (72,751)
query : 1 - 1,889 (1,889/1,903)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025568)
HIX0025568
HIT000109073 (
ENST00000263851
)
(Interleukin-7; IL-7; Precursor;)
genome : 79,645,007 - 79,717,758 (72,752)
query : 1 - 2,076 (2,076/2,076)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025568)
HIX0025568
HIT000385130
(
AK226000
)
(Interleukin-7 isoform 2 precursor.)
genome : 79,645,289 - 79,717,699 (72,411)
query : 1 - 1,934 (1,934/1,950)
7 exons
identity = 0.998
3'(0.999;1.000;1.000;0.988;1.000;1.000;0.998)5'
coverage = 1.000
InterPro :
IPR000226 : Interleukin-7/interleukin-9 family
IPR001181 : Interleukin-7
GO :
0005126 : Molecular Function : cytokine receptor binding
0005139 : Molecular Function : interleukin-7 receptor binding
0005576 : Cellular Component : extracellular region
0006955 : Biological Process : immune response
0008083 : Molecular Function : growth factor activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025568)
HIX0025568
HIT000191246
(
J04156
)
(Interleukin-7; IL-7; Precursor;)
genome : 79,645,277 - 79,717,541 (72,265)
query : 1 - 1,589 (1,589/1,589)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000226 : Interleukin-7/interleukin-9 family
IPR001181 : Interleukin-7
IPR018049 : Interleukin-7/Interleukin-9, conserved site
GO :
0005126 : Molecular Function : cytokine receptor binding
0005139 : Molecular Function : interleukin-7 receptor binding
0005576 : Cellular Component : extracellular region
0006955 : Biological Process : immune response
0008083 : Molecular Function : growth factor activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025568)
HIX0025568
HIT000618349 (
ENST00000518982
)
(Interleukin-7; IL-7; Precursor;)
genome : 79,645,283 - 79,717,699 (72,417)
query : 1 - 1,940 (1,940/1,940)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025568)
HIX0025568
HIT000424335
(
AK291538
)
(Interleukin-7; IL-7; Precursor;)
genome : 79,645,672 - 79,717,758 (72,087)
query : 1 - 1,411 (1,411/1,411)
6 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.993;1.000)5'
coverage = 1.000
InterPro :
IPR000226 : Interleukin-7/interleukin-9 family
IPR001181 : Interleukin-7
IPR018049 : Interleukin-7/Interleukin-9, conserved site
GO :
0005126 : Molecular Function : cytokine receptor binding
0005139 : Molecular Function : interleukin-7 receptor binding
0005576 : Cellular Component : extracellular region
0006955 : Biological Process : immune response
0008083 : Molecular Function : growth factor activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025568)
HIX0025568
HIT000619657 (
ENST00000520317
)
(Interleukin-7; IL-7; Precursor;)
genome : 79,645,900 - 79,717,686 (71,787)
query : 1 - 1,055 (1,055/1,055)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025568)
HIX0025568
HIT000619556 (
ENST00000520215
)
(Interleukin-7 isoform 2 precursor.)
genome : 79,645,900 - 79,710,444 (64,545)
query : 16 - 400 (385/400)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.963
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025568)
HIX0025568
HIT000619610 (
ENST00000520269
)
(Interleukin-7 isoform 2 precursor.)
genome : 79,645,900 - 79,710,444 (64,545)
query : 16 - 456 (441/456)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.967
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025568)
HIX0025568
HIT000242252
(
AB102879
)
(Interleukin-7 isoform 2 precursor.)
genome : 79,645,948 - 79,710,444 (64,497)
query : 10 - 402 (393/402)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.978
InterPro :
IPR000226 : Interleukin-7/interleukin-9 family
IPR001181 : Interleukin-7
IPR018049 : Interleukin-7/Interleukin-9, conserved site
GO :
0005126 : Molecular Function : cytokine receptor binding
0005139 : Molecular Function : interleukin-7 receptor binding
0005576 : Cellular Component : extracellular region
0006955 : Biological Process : immune response
0008083 : Molecular Function : growth factor activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025568)
HIX0025568
HIT000242266
(
AB102893
)
(Interleukin-7; IL-7; Precursor;)
genome : 79,645,948 - 79,710,444 (64,497)
query : 10 - 348 (339/348)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.974
InterPro :
IPR000226 : Interleukin-7/interleukin-9 family
IPR001181 : Interleukin-7
IPR018049 : Interleukin-7/Interleukin-9, conserved site
GO :
0005126 : Molecular Function : cytokine receptor binding
0005139 : Molecular Function : interleukin-7 receptor binding
0005576 : Cellular Component : extracellular region
0006955 : Biological Process : immune response
0008083 : Molecular Function : growth factor activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025568)
HIX0025568
HIT000648452
(
GQ919059
)
(Interleukin-7; IL-7; Precursor;)
genome : 79,645,948 - 79,710,378 (64,431)
query : 1 - 459 (459/459)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000226 : Interleukin-7/interleukin-9 family
IPR001181 : Interleukin-7
IPR018049 : Interleukin-7/Interleukin-9, conserved site
GO :
0005126 : Molecular Function : cytokine receptor binding
0005139 : Molecular Function : interleukin-7 receptor binding
0005576 : Cellular Component : extracellular region
0006955 : Biological Process : immune response
0008083 : Molecular Function : growth factor activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 12, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025568)
HIX0025568
HIT000242255
(
AB102882
)
(Interleukin-7; IL-7; Precursor;)
genome : 79,652,295 - 79,710,444 (58,150)
query : 10 - 114 (105/114)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.921
InterPro :
IPR000226 : Interleukin-7/interleukin-9 family
IPR001181 : Interleukin-7
GO :
0005126 : Molecular Function : cytokine receptor binding
0005139 : Molecular Function : interleukin-7 receptor binding
0005576 : Cellular Component : extracellular region
0006955 : Biological Process : immune response
0008083 : Molecular Function : growth factor activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025568)
HIX0007609
HIT000072655
(
AF176422
)
Representative transcript
(Hairy/enhancer-of-split related with YRPW motif protein 1; Cardiovascular helix-loop-helix factor 2; CHF-2; Class B basic helix-loop-helix protein 31; bHLHb31; HES-related repressor protein 1; Hairy and enhancer of split-related protein 1; HESR-1; Hairy-related transcription factor 1; HRT-1; hHRT1;)
genome : 80,676,247 - 80,679,980 (3,734)
query : 20 - 2,192 (2,173/2,234)
5 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000)5'
coverage = 0.991
InterPro :
IPR003650 : Orange
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
GO :
0003677 : Molecular Function : DNA binding
0006355 : Biological Process : regulation of transcription, DNA-templated
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007609)
HIX0007609
HIT000204039 (
NM_012258
)
(Myc-type, basic helix-loop-helix (bHLH) domain containing protein.)
genome : 80,676,245 - 80,680,098 (3,854)
query : 1 - 2,293 (2,293/2,319)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007609)
HIX0007609
HIT000366816 (
NM_001040708
)
(Myc-type, basic helix-loop-helix (bHLH) domain containing protein.)
genome : 80,676,245 - 80,680,098 (3,854)
query : 1 - 2,305 (2,305/2,331)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007609)
HIX0007609
HIT000074647
(
AF232239
)
(Hairy/enhancer-of-split related with YRPW motif protein 1; Cardiovascular helix-loop-helix factor 2; CHF-2; Class B basic helix-loop-helix protein 31; bHLHb31; HES-related repressor protein 1; Hairy and enhancer of split-related protein 1; HESR-1; Hairy-related transcription factor 1; HRT-1; hHRT1;)
genome : 80,676,245 - 80,680,004 (3,760)
query : 1 - 2,197 (2,197/2,223)
5 exons
identity = 0.997
3'(0.997;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003650 : Orange
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
GO :
0003677 : Molecular Function : DNA binding
0006355 : Biological Process : regulation of transcription, DNA-templated
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007609)
HIX0007609
HIT000030712
(
BC001873
)
(Hairy/enhancer-of-split related with YRPW motif protein 1; Cardiovascular helix-loop-helix factor 2; CHF-2; Class B basic helix-loop-helix protein 31; bHLHb31; HES-related repressor protein 1; Hairy and enhancer of split-related protein 1; HESR-1; Hairy-related transcription factor 1; HRT-1; hHRT1;)
genome : 80,676,268 - 80,679,995 (3,728)
query : 1 - 2,167 (2,167/2,215)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003650 : Orange
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
GO :
0003677 : Molecular Function : DNA binding
0006355 : Biological Process : regulation of transcription, DNA-templated
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007609)
HIX0007609
HIT000385171
(
AK226041
)
(Hairy/enhancer-of-split related with YRPW motif protein 1; Cardiovascular helix-loop-helix factor 2; CHF-2; Class B basic helix-loop-helix protein 31; bHLHb31; HES-related repressor protein 1; Hairy and enhancer of split-related protein 1; HESR-1; Hairy-related transcription factor 1; HRT-1; hHRT1;)
genome : 80,676,245 - 80,680,005 (3,761)
query : 1 - 2,199 (2,199/2,216)
5 exons
identity = 0.998
3'(0.998;1.000;0.988;1.000;0.995)5'
coverage = 1.000
InterPro :
IPR003650 : Orange
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
GO :
0003677 : Molecular Function : DNA binding
0006355 : Biological Process : regulation of transcription, DNA-templated
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007609)
HIX0007609
HIT000075122
(
AF254637
)
(Hairy/enhancer-of-split related with YRPW motif protein 1; Cardiovascular helix-loop-helix factor 2; CHF-2; Class B basic helix-loop-helix protein 31; bHLHb31; HES-related repressor protein 1; Hairy and enhancer of split-related protein 1; HESR-1; Hairy-related transcription factor 1; HRT-1; hHRT1;)
genome : 80,676,264 - 80,680,015 (3,752)
query : 1 - 2,191 (2,191/2,225)
5 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003650 : Orange
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
GO :
0003677 : Molecular Function : DNA binding
0006355 : Biological Process : regulation of transcription, DNA-templated
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007609)
HIX0007609
HIT000308974 (
ENST00000354724
)
(Myc-type, basic helix-loop-helix (bHLH) domain containing protein.)
genome : 80,676,245 - 80,680,098 (3,854)
query : 1 - 2,293 (2,293/2,293)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007609)
HIX0007609
HIT000017304
(
AK092437
)
(Hairy/enhancer-of-split related with YRPW motif protein 1; Cardiovascular helix-loop-helix factor 2; CHF-2; Class B basic helix-loop-helix protein 31; bHLHb31; HES-related repressor protein 1; Hairy and enhancer of split-related protein 1; HESR-1; Hairy-related transcription factor 1; HRT-1; hHRT1;)
genome : 80,676,246 - 80,680,005 (3,760)
query : 1 - 2,035 (2,035/2,035)
6 exons
identity = 0.998
3'(0.997;0.997;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003650 : Orange
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
GO :
0003677 : Molecular Function : DNA binding
0006355 : Biological Process : regulation of transcription, DNA-templated
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007609)
HIX0007609
HIT000081676
(
AK074641
)
(Hairy/enhancer-of-split related with YRPW motif protein 1; Cardiovascular helix-loop-helix factor 2; CHF-2; Class B basic helix-loop-helix protein 31; bHLHb31; HES-related repressor protein 1; Hairy and enhancer of split-related protein 1; HESR-1; Hairy-related transcription factor 1; HRT-1; hHRT1;)
genome : 80,676,246 - 80,680,001 (3,756)
query : 1 - 2,196 (2,196/2,196)
5 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003650 : Orange
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
GO :
0003677 : Molecular Function : DNA binding
0006355 : Biological Process : regulation of transcription, DNA-templated
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007609)
HIX0007609
HIT000130699 (
ENST00000337919
)
(Myc-type, basic helix-loop-helix (bHLH) domain containing protein.)
genome : 80,676,248 - 80,680,092 (3,845)
query : 1 - 2,296 (2,296/2,296)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007609)
HIX0007609
HIT000071596
(
AF151522
)
(Hairy/enhancer-of-split related with YRPW motif protein 1; Cardiovascular helix-loop-helix factor 2; CHF-2; Class B basic helix-loop-helix protein 31; bHLHb31; HES-related repressor protein 1; Hairy and enhancer of split-related protein 1; HESR-1; Hairy-related transcription factor 1; HRT-1; hHRT1;)
genome : 80,676,259 - 80,679,922 (3,664)
query : 1 - 2,103 (2,103/2,103)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003650 : Orange
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
GO :
0003677 : Molecular Function : DNA binding
0006355 : Biological Process : regulation of transcription, DNA-templated
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007609)
HIX0007609
HIT000246250
(
AJ272214
)
(Myc-type, basic helix-loop-helix (bHLH) domain containing protein.)
genome : 80,677,297 - 80,679,983 (2,687)
query : 1 - 1,126 (1,126/1,126)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003650 : Orange
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
GO :
0003677 : Molecular Function : DNA binding
0006355 : Biological Process : regulation of transcription, DNA-templated
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007609)
HIX0007609
HIT000432137
(
AK313271
)
(Myc-type, basic helix-loop-helix (bHLH) domain containing protein.)
genome : 80,677,423 - 80,680,002 (2,580)
query : 1 - 1,019 (1,019/1,019)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003650 : Orange
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
GO :
0003677 : Molecular Function : DNA binding
0006355 : Biological Process : regulation of transcription, DNA-templated
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007609)
HIX0007609
HIT000077018
(
AF311883
)
(Myc-type, basic helix-loop-helix (bHLH) domain containing protein.)
genome : 80,677,423 - 80,679,898 (2,476)
query : 1 - 915 (915/915)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003650 : Orange
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
GO :
0003677 : Molecular Function : DNA binding
0006355 : Biological Process : regulation of transcription, DNA-templated
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007609)
HIX0007609
HIT000266802
(
BT020065
)
(Myc-type, basic helix-loop-helix (bHLH) domain containing protein.)
genome : 80,677,424 - 80,679,898 (2,475)
query : 1 - 914 (914/915)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR003650 : Orange
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
GO :
0003677 : Molecular Function : DNA binding
0006355 : Biological Process : regulation of transcription, DNA-templated
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007609)
HIX0007609
HIT000618105 (
ENST00000518733
)
(Myc-type, basic helix-loop-helix (bHLH) domain containing protein.)
genome : 80,677,666 - 80,679,707 (2,042)
query : 1 - 761 (761/761)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007609)
HIX0152680
HIT000468747
(
EF152584
)
Representative transcript
(Tumor protein D52 isoform 1.)
genome : 80,831,095 - 80,993,010 (161,916)
query : 1 - 1,527 (1,527/1,544)
8 exons
identity = 0.996
3'(1.000;0.989;1.000;0.925;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR007327 : Tumour protein D52
IPR019375 : Ribosomal protein S28, mitochondrial
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 17, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0152680)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB172785
Mus
sp. (Mouse) : AK032111
Bos
sp. (Cow) : BC102644
Danio
sp. (Zebrafish) : BC133913
Gallus
sp. (Chicken) : CR390487
Equus
sp. (Horse) : ENSECAT00000014729
Oryzias
sp. (Medaka) : ENSORLT00000016243
Rattus
sp. (Rat) : XM_001054008
Pan
sp. (Chimpanzee) : XM_001162922
Monodelphis
sp. (Opossum) : XM_001377421
Canis
sp. (Dog) : XM_535110
HIX0152680
HIT000636900 (
ENST00000537855
)
(Tumor protein D52 isoform 1.)
genome : 80,870,571 - 80,993,010 (122,440)
query : 1 - 1,159 (1,159/1,159)
7 exons
identity = 0.997
3'(1.000;1.000;0.925;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 17, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0152680)
AC068700.5
79500001-79565794 F +
NCBI
AC100854.2
79565795-79637592 F -
NCBI
AC083837.4
79637593-79788347 F -
NCBI
AC016031.6
79788348-79857222 F +
NCBI
AC009941.5
79857223-80012778 F -
NCBI
AC079071.9
80012779-80161762 F -
NCBI
AC138646.3
80161763-80297633 F -
NCBI
AC100870.7
80297634-80436197 F +
NCBI
AC025599.8
80436198-80574210 F +
NCBI
AC016240.23
80574211-80731247 F -
NCBI
AC036214.9
80731248-80890315 F -
NCBI
AC018952.9
80890316-80937957 F +
NCBI
AC009686.14
80937958-81100000 F +
NCBI