bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0028078
HIT000084904
(
AY168341
)
(Retinitis pigmentosa 1-like 1 protein;)
genome : 10,463,861 - 10,512,617 (48,757)
query : 1 - 7,977 (7,977/7,993)
4 exons
identity = 0.998
3'(0.995)5'
coverage = 1.000
InterPro :
IPR003533 : Doublecortin domain
GO :
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14.5, nucl 13, cyto_mito 9.66667,
cyto_nucl 9.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028078)
HIX0028078
HIT000084905
(
AY168342
)
(Retinitis pigmentosa 1-like 1 protein.)
genome : 10,463,861 - 10,512,617 (48,757)
query : 1 - 8,025 (8,025/8,041)
4 exons
identity = 0.993
3'(0.995)5'
coverage = 1.000
InterPro :
IPR003533 : Doublecortin domain
GO :
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14.5, nucl 13, cyto_mito 9.66667,
cyto_nucl 9.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028078)
HIX0028078
HIT000084906
(
AY168343
)
(Retinitis pigmentosa 1-like 1 protein.)
genome : 10,463,861 - 10,512,617 (48,757)
query : 1 - 8,073 (8,073/8,089)
4 exons
identity = 0.986
3'(0.995)5'
coverage = 1.000
InterPro :
IPR003533 : Doublecortin domain
GO :
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14.5, nucl 13, cyto_mito 9.66667,
cyto_nucl 9.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028078)
HIX0028078
HIT000084907
(
AY168344
)
(Retinitis pigmentosa 1-like 1 protein;)
genome : 10,463,861 - 10,512,617 (48,757)
query : 1 - 8,121 (8,121/8,137)
4 exons
identity = 0.981
3'(0.995)5'
coverage = 1.000
InterPro :
IPR003533 : Doublecortin domain
GO :
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14.5, nucl 13, cyto_mito 9.66667,
cyto_nucl 9.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028078)
HIX0028078
HIT000084908
(
AY168345
)
(Retinitis pigmentosa 1-like 1 protein;)
genome : 10,463,861 - 10,512,617 (48,757)
query : 1 - 8,169 (8,169/8,185)
4 exons
identity = 0.975
3'(0.995)5'
coverage = 1.000
InterPro :
IPR003533 : Doublecortin domain
GO :
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, mito 11.5, cyto_nucl 11.3333, cyto_mito 9,
cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028078)
HIX0028078
HIT000084909
(
AY168346
)
(Retinitis pigmentosa 1-like 1 protein;)
genome : 10,463,861 - 10,512,617 (48,757)
query : 1 - 8,217 (8,217/8,233)
4 exons
identity = 0.969
3'(0.995)5'
coverage = 1.000
InterPro :
IPR003533 : Doublecortin domain
GO :
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14.5, nucl 13, cyto_mito 9.66667,
cyto_nucl 9.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028078)
HIX0028078
HIT000318211 (
NM_178857
)
(Retinitis pigmentosa 1-like 1 protein.)
genome : 10,463,859 - 10,512,617 (48,759)
query : 1 - 7,978 (7,978/7,978)
4 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14.5, nucl 13, cyto_mito 9.66667,
cyto_nucl 9.33333
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028078)
HIX0028078
HIT000363761 (
ENST00000382483
)
(Retinitis pigmentosa 1-like 1 protein.)
genome : 10,463,859 - 10,512,612 (48,754)
query : 1 - 7,973 (7,973/7,973)
4 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14.5, nucl 13, cyto_mito 9.66667,
cyto_nucl 9.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028078)
HIX0028078
HIT000248197
(
AJ491324
)
Representative transcript
(Retinitis pigmentosa 1-like 1 protein;)
genome : 10,463,882 - 10,512,666 (48,785)
query : 1 - 8,194 (8,194/8,194)
4 exons
identity = 0.976
3'(0.992)5'
coverage = 1.000
InterPro :
IPR003533 : Doublecortin domain
GO :
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, mito 11.5, cyto_nucl 11.3333, cyto_mito 9,
cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028078)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC129887
Equus
sp. (Horse) : ENSECAT00000013429
Tetraodon
sp. (Tetraodon) : GSTENT00030293001
Takifugu
sp. (Fugu) : SINFRUT00000156366
Macaca
sp. (Macaque) : XM_001090506
Danio
sp. (Zebrafish) : XM_001921076
Canis
sp. (Dog) : XM_543211
Bos
sp. (Cow) : XM_867581
HIX0028078
HIT000047418
(
AK127545
)
(Retinitis pigmentosa 1-like 1 protein;)
genome : 10,478,606 - 10,569,697 (91,092)
query : 1 - 1,536 (1,536/1,536)
3 exons
identity = 0.998
3'(1.000)5'
coverage = 1.000
InterPro :
IPR003533 : Doublecortin domain
GO :
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028078)
HIX0028078
HIT000126069 (
ENST00000329335
)
(Retinitis pigmentosa 1-like 1 protein;)
genome : 10,478,606 - 10,569,697 (91,092)
query : 1 - 1,536 (1,536/1,536)
3 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028078)
HIX0209098
HIT000659511 (
NR_036248
)
(Hypothetical short protein.)
genome : 10,524,488 - 10,524,580 (93)
query : 1 - 93 (93/93)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209098)
HIX0209098
HIT000692562 (
ENST00000580651
)
(Hypothetical short protein.)
genome : 10,524,488 - 10,524,580 (93)
query : 1 - 93 (93/93)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209098)
HIX0034309
pHIT000106589 ( pHIT000106589 )
(Conserved hypothetical protein.)
genome : 10,528,863 - 10,537,550 (8,688)
query : 1 - 516 (516/516)
3 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034309)
CAGE tag :
T08F009FE2C1
HIX0034309
HIT000389320
(
BC127692
)
(Conserved hypothetical protein.)
genome : 10,530,138 - 10,558,032 (27,895)
query : 1 - 974 (974/974)
4 exons
identity = 0.999
5'(0.988;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 15.5, nucl 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034309)
HIX0034309
HIT000435896
(
BC150573
)
(Conserved hypothetical protein.)
genome : 10,530,138 - 10,558,032 (27,895)
query : 1 - 974 (974/974)
4 exons
identity = 0.999
5'(0.988;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 15.5, nucl 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034309)
HIX0034309
HIT000262077
(
BC065837
)
(Conserved hypothetical protein.)
genome : 10,530,147 - 10,558,103 (27,957)
query : 1 - 1,036 (1,036/1,080)
4 exons
identity = 0.999
5'(0.987;1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 15.5, nucl 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034309)
HIX0034309
HIT000366631 (
NM_001040032
)
(Conserved hypothetical protein.)
genome : 10,530,147 - 10,558,103 (27,957)
query : 1 - 1,036 (1,036/1,080)
4 exons
identity = 0.999
5'(0.987;1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 15.5, nucl 11
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034309)
HIX0034309
HIT000116759 (
ENST00000304519
)
(Conserved hypothetical protein.)
genome : 10,530,147 - 10,558,103 (27,957)
query : 1 - 1,036 (1,036/1,036)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 15.5, nucl 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034309)
HIX0034309
HIT000390905
(
BC132852
)
(Conserved hypothetical protein.)
genome : 10,530,147 - 10,558,021 (27,875)
query : 1 - 954 (954/954)
4 exons
identity = 0.999
5'(0.987;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 15.5, nucl 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034309)
HIX0034309
HIT000390907
(
BC132854
)
(Conserved hypothetical protein.)
genome : 10,530,147 - 10,558,021 (27,875)
query : 1 - 954 (954/954)
4 exons
identity = 0.999
5'(0.987;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 15.5, nucl 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034309)
HIX0034309
HIT000249731
(
AK131443
)
(Conserved hypothetical protein.)
genome : 10,530,163 - 10,547,266 (17,104)
query : 1 - 1,919 (1,919/1,919)
4 exons
identity = 0.998
5'(0.984;1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18, nucl 16, cyto 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034309)
HIX0034309
HIT000622996 (
ENST00000523723
)
(Conserved hypothetical protein.)
genome : 10,530,163 - 10,547,266 (17,104)
query : 1 - 1,919 (1,919/1,919)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18, nucl 16, cyto 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034309)
HIX0034309
HIT000616813 (
ENST00000517414
)
(Conserved hypothetical protein.)
genome : 10,530,163 - 10,545,994 (15,832)
query : 1 - 455 (455/455)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 17.5, nucl 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034309)
HIX0034309
HIT000623292 (
ENST00000524025
)
(Conserved hypothetical protein.)
genome : 10,530,163 - 10,537,509 (7,347)
query : 1 - 529 (529/529)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 12.3333, cyto 8, extr 7,
cyto_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034309)
HIX0034309
HIT000095246
(
BC038534
)
Representative transcript
(Conserved hypothetical protein.)
genome : 10,530,171 - 10,558,100 (27,930)
query : 1 - 1,201 (1,201/1,220)
5 exons
identity = 0.999
5'(0.981;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18, nucl 16, cyto 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034309)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK016302
Bos
sp. (Cow) : BC111241
Canis
sp. (Dog) : ENSCAFT00000012911
Equus
sp. (Horse) : ENSECAT00000013485
Pongo
sp. (Orangutan) : ENSPPYT00000021402
Bos
sp. (Cow) : XM_001251662
Monodelphis
sp. (Opossum) : XM_001381989
Rattus
sp. (Rat) : XM_573805
Pan
sp. (Chimpanzee) : XR_022483
HIX0034309
HIT000622571 (
ENST00000523289
)
(Conserved hypothetical protein.)
genome : 10,530,171 - 10,558,100 (27,930)
query : 1 - 1,201 (1,201/1,201)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18, nucl 16, cyto 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034309)
HIX0034309
HIT000621129 (
ENST00000521818
)
(Conserved hypothetical protein.)
genome : 10,530,181 - 10,550,481 (20,301)
query : 1 - 2,338 (2,338/2,338)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 15.5, cyto 11.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034309)
HIX0034309
HIT000619272 (
ENST00000519925
)
(Conserved hypothetical protein.)
genome : 10,532,156 - 10,533,348 (1,193)
query : 1 - 461 (461/461)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, mito 6, cyto 4, cysk_plas 2, cyto_golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034309)
HIX0218022
HIT000210178 (
NM_031439
)
(Transcription factor SOX-7;)
genome : 10,581,278 - 10,588,022 (6,745)
query : 1 - 3,216 (3,216/3,219)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 17.5, cyto 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218022)
HIX0218022
HIT000116750 (
ENST00000304501
)
(Transcription factor SOX-7;)
genome : 10,581,278 - 10,588,022 (6,745)
query : 1 - 3,216 (3,216/3,216)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 17.5, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218022)
HIX0218022
HIT000264754
(
BC071947
)
(Transcription factor SOX-7;)
genome : 10,582,246 - 10,588,010 (5,765)
query : 1 - 2,236 (2,236/2,255)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
InterPro :
IPR009071 : High mobility group box domain
IPR021934 : Sox C-terminal transactivation domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 17.5, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218022)
HIX0218022
HIT000012170
(
AK055556
)
Representative transcript
(Transcription factor SOX-7;)
genome : 10,582,247 - 10,588,022 (5,776)
query : 1 - 2,247 (2,247/2,247)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
InterPro :
IPR009071 : High mobility group box domain
IPR021934 : Sox C-terminal transactivation domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 17.5, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218022)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK156497
Danio
sp. (Zebrafish) : BC075872
Bos
sp. (Cow) : ENSBTAT00000004938
Macaca
sp. (Macaque) : ENSMMUT00000014211
Monodelphis
sp. (Opossum) : ENSMODT00000011304
Oryzias
sp. (Medaka) : FJ895592
Tetraodon
sp. (Tetraodon) : GSTENT00030291001
Takifugu
sp. (Fugu) : SINFRUT00000151879
Rattus
sp. (Rat) : XM_001065660
Pan
sp. (Chimpanzee) : XM_001174088
Canis
sp. (Dog) : XM_844787
Equus
sp. (Horse) : XR_044489
HIX0218022
HIT000031850
(
BC004299
)
(Transcription factor SOX-7;)
genome : 10,582,547 - 10,588,011 (5,465)
query : 1 - 1,936 (1,936/2,089)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.936
InterPro :
IPR009071 : High mobility group box domain
IPR021934 : Sox C-terminal transactivation domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 17.5, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218022)
HIX0218022
HIT000331354
(
AK223574
)
(Transcription factor SOX-7;)
genome : 10,583,216 - 10,588,022 (4,807)
query : 1 - 1,278 (1,278/1,278)
2 exons
identity = 0.999
3'(1.000;0.997)5'
coverage = 1.000
InterPro :
IPR009071 : High mobility group box domain
IPR021934 : Sox C-terminal transactivation domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 17.5, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218022)
HIX0218022
HIT000099613
(
BT006693
)
(Transcription factor SOX-7;)
genome : 10,583,248 - 10,587,943 (4,696)
query : 1 - 1,167 (1,167/1,167)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
InterPro :
IPR009071 : High mobility group box domain
IPR021934 : Sox C-terminal transactivation domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 17.5, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218022)
HIX0218022
HIT000247551
(
AJ409320
)
(Transcription factor SOX-7;)
genome : 10,583,248 - 10,587,943 (4,696)
query : 1 - 1,167 (1,167/1,167)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
InterPro :
IPR009071 : High mobility group box domain
IPR021934 : Sox C-terminal transactivation domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 17.5, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218022)
HIX0034585
HIT000097765
(
BC043573
)
Representative transcript
(Conserved hypothetical protein.)
genome : 10,586,824 - 10,622,667 (35,844)
query : 1 - 1,257 (1,257/1,352)
3 exons
identity = 0.995
5'(0.994;1.000;0.995)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034585)
HIX0034585
HIT000606230 (
ENST00000506149
)
(Conserved hypothetical protein.)
genome : 10,586,824 - 10,622,233 (35,410)
query : 1 - 821 (821/821)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034585)
HIX0034585
HIT000618918 (
ENST00000519568
)
(Hypothetical short protein.)
genome : 10,587,088 - 10,628,902 (41,815)
query : 1 - 251 (251/251)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 8.5, cyto_nucl 8.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034585)
HIX0023045
HIT000247225
(
AJ344104
)
Representative transcript
(PIN2/TERF1-interacting telomerase inhibitor 1; Liver-related putative tumor suppressor; Pin2-interacting protein X1; Protein 67-11-3; TRF1-interacting protein 1;)
genome : 10,622,474 - 10,697,386 (74,913)
query : 13 - 1,556 (1,544/1,577)
7 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.992
InterPro :
IPR000467 : G-patch domain
GO :
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023045)
HIX0023045
HIT000120284 (
ENST00000314787
)
(G-patch domain containing protein.)
genome : 10,622,473 - 10,697,386 (74,914)
query : 1 - 1,545 (1,545/1,545)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023045)
HIX0023045
HIT000524124 (
ENST00000426190
)
(G-patch domain containing protein.)
genome : 10,622,475 - 10,697,386 (74,912)
query : 1 - 1,466 (1,466/1,466)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, extr 7, cyto 3, mito 3, cyto_mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023045)
HIX0023045
HIT000073866
(
AF205718
)
(PIN2/TERF1-interacting telomerase inhibitor 1; Liver-related putative tumor suppressor; Pin2-interacting protein X1; Protein 67-11-3; TRF1-interacting protein 1;)
genome : 10,622,669 - 10,697,386 (74,718)
query : 13 - 1,284 (1,272/1,316)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.991
InterPro :
IPR000467 : G-patch domain
GO :
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, extr 7, cyto 3, mito 3, cyto_mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023045)
HIX0023045
HIT000079359
(
AF418553
)
(PIN2/TERF1-interacting telomerase inhibitor 1; Liver-related putative tumor suppressor; Pin2-interacting protein X1; Protein 67-11-3; TRF1-interacting protein 1;)
genome : 10,622,669 - 10,697,386 (74,718)
query : 13 - 1,361 (1,349/1,393)
7 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.991
InterPro :
IPR000467 : G-patch domain
GO :
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023045)
HIX0023045
HIT000003047
(
AK000572
)
(PIN2/TERF1-interacting telomerase inhibitor 1; Liver-related putative tumor suppressor; Pin2-interacting protein X1; Protein 67-11-3; TRF1-interacting protein 1;)
genome : 10,622,669 - 10,697,381 (74,713)
query : 388 - 1,731 (1,344/1,755)
7 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.990
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023045)
HIX0023045
HIT000037133
(
BC015479
)
(PIN2/TERF1-interacting telomerase inhibitor 1; Liver-related putative tumor suppressor; Pin2-interacting protein X1; Protein 67-11-3; TRF1-interacting protein 1;)
genome : 10,622,669 - 10,697,355 (74,687)
query : 1 - 1,318 (1,318/1,332)
7 exons
identity = 0.998
3'(0.999;1.000;1.000;1.000;0.989;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000467 : G-patch domain
GO :
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023045)
HIX0023045
HIT000618452 (
ENST00000519088
)
(G-patch domain containing protein.)
genome : 10,622,669 - 10,697,386 (74,718)
query : 1 - 1,272 (1,272/1,272)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, extr 7, cyto 3, mito 3, cyto_mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023045)
HIX0023045
HIT000085444
(
AY238941
)
(PIN2/TERF1-interacting telomerase inhibitor 1; Liver-related putative tumor suppressor; Pin2-interacting protein X1; Protein 67-11-3; TRF1-interacting protein 1;)
genome : 10,622,810 - 10,697,291 (74,482)
query : 1 - 1,036 (1,036/1,036)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000467 : G-patch domain
GO :
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, extr 7, cyto 3, mito 3, cyto_mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023045)
HIX0023045
HIT000255137
(
AY523566
)
(PIN2/TERF1-interacting telomerase inhibitor 1; Liver-related putative tumor suppressor; Pin2-interacting protein X1; Protein 67-11-3; TRF1-interacting protein 1;)
genome : 10,622,810 - 10,697,291 (74,482)
query : 1 - 1,113 (1,113/1,113)
7 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000467 : G-patch domain
GO :
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023045)
HIX0023045
HIT000501838
(
BC143382
)
(PIN2/TERF1-interacting telomerase inhibitor 1; Liver-related putative tumor suppressor; Pin2-interacting protein X1; Protein 67-11-3; TRF1-interacting protein 1;)
genome : 10,622,882 - 10,697,299 (74,418)
query : 1 - 972 (972/972)
6 exons
identity = 0.999
3'(1.000;1.000;0.987;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000467 : G-patch domain
GO :
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, extr 7, cyto 3, mito 3, cyto_mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023045)
HIX0023045
HIT000206743 (
NM_017884
)
(G-patch domain containing protein.)
genome : 10,622,884 - 10,697,299 (74,416)
query : 1 - 1,047 (1,047/1,047)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023045)
HIX0023045
HIT000334737
(
BC093762
)
(PIN2/TERF1-interacting telomerase inhibitor 1; Liver-related putative tumor suppressor; Pin2-interacting protein X1; Protein 67-11-3; TRF1-interacting protein 1;)
genome : 10,622,884 - 10,697,299 (74,416)
query : 1 - 1,047 (1,047/1,047)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000467 : G-patch domain
GO :
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023045)
HIX0023045
HIT000432581
(
AK313715
)
(PIN2/TERF1-interacting telomerase inhibitor 1; Liver-related putative tumor suppressor; Pin2-interacting protein X1; Protein 67-11-3; TRF1-interacting protein 1;)
genome : 10,622,911 - 10,697,347 (74,437)
query : 1 - 1,068 (1,068/1,068)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000467 : G-patch domain
GO :
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023045)
HIX0023045
HIT000623380 (
ENST00000524114
)
(G-patch domain containing protein.)
genome : 10,623,333 - 10,697,281 (73,949)
query : 1 - 610 (610/610)
7 exons
identity = 0.993
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.941)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023045)
HIX0023045
HIT000622836 (
ENST00000523559
)
(G-patch domain containing protein.)
genome : 10,623,365 - 10,697,386 (74,022)
query : 1 - 778 (778/778)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, extr 7, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023045)
HIX0023045
HIT000623328 (
ENST00000524061
)
(Non-protein coding transcript.)
genome : 10,645,032 - 10,677,822 (32,791)
query : 17 - 440 (424/440)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.964
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023045)
HIX0034514
HIT000090314
(
BC020930
)
Representative transcript
(Hypothetical short protein.)
genome : 10,660,589 - 10,662,320 (1,732)
query : 1 - 1,732 (1,732/1,761)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, nucl 4.5, cyto_nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034514)
HIX0023045
HIT000617002 (
ENST00000517607
)
(G-patch domain containing protein.)
genome : 10,679,370 - 10,690,494 (11,125)
query : 1 - 530 (530/530)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 8, cyto_nucl 8, cyto_plas 8,
cyto_golg 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023045)
HIX0209092
HIT000658623 (
NR_031711
)
(Non-protein coding transcript.)
genome : 10,682,883 - 10,682,953 (71)
query : 1 - 71 (71/71)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209092)
HIX0023045
HIT000619364 (
ENST00000520018
)
(G-patch domain containing protein.)
genome : 10,690,401 - 10,697,350 (6,950)
query : 1 - 601 (601/601)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023045)
HIX0023045
HIT000623293 (
ENST00000524026
)
(G-patch domain containing protein.)
genome : 10,691,862 - 10,697,394 (5,533)
query : 1 - 571 (571/571)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023045)
HIX0208836
HIT000621333 (
ENST00000522026
)
(Hypothetical short protein.)
genome : 10,698,086 - 10,704,011 (5,926)
query : 1 - 439 (439/439)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, nucl 6, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208836)
HIX0007309
HIT000056379
(
BX647732
)
Representative transcript
(Hypothetical protein.)
genome : 10,713,596 - 10,716,946 (3,351)
query : 1 - 3,350 (3,350/3,367)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 11.5, cyto_nucl 11.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007309)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK080602
HIX0007309
HIT000019380
(
AK094525
)
(Hypothetical protein.)
genome : 10,713,720 - 10,715,695 (1,976)
query : 5 - 1,980 (1,976/1,980)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 11.5, cyto_nucl 11.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007309)
HIX0007310
HIT000363739 (
ENST00000382461
)
(XK-related protein 6 isoform b.)
genome : 10,753,555 - 10,859,991 (106,437)
query : 1 - 3,163 (3,163/3,163)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007310)
HIX0007310
HIT000039738
(
BC024146
)
(XK-related protein 6 isoform b.)
genome : 10,753,662 - 10,859,991 (106,330)
query : 1 - 3,056 (3,056/3,127)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR018629 : Transport protein XK
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007310)
HIX0007310
HIT000215059 (
NM_173683
)
(XK-related protein 6 isoform b.)
genome : 10,753,654 - 11,058,875 (305,222)
query : 1 - 3,761 (3,761/3,761)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007310)
HIX0007310
HIT000116731 (
ENST00000304437
)
(XK-related protein 6 isoform b.)
genome : 10,753,665 - 10,859,991 (106,327)
query : 1 - 3,053 (3,053/3,053)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007310)
HIX0007310
HIT000514503 (
ENST00000416569
)
(XK-related protein 6 isoform b.)
genome : 10,754,033 - 11,058,875 (304,843)
query : 1 - 3,382 (3,382/3,382)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007310)
HIX0007310
HIT000255221
(
AY534244
)
Representative transcript
(XK-related protein 6 isoform b.)
genome : 10,754,481 - 11,058,875 (304,395)
query : 1 - 2,934 (2,934/2,951)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR018629 : Transport protein XK
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007310)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AY534252
Takifugu
sp. (Fugu) : AY534268
Tetraodon
sp. (Tetraodon) : AY702901
Pan
sp. (Chimpanzee) : AY702909
Bos
sp. (Cow) : ENSBTAT00000007096
Danio
sp. (Zebrafish) : ENSDART00000063725
Equus
sp. (Horse) : ENSECAT00000014582
Oryzias
sp. (Medaka) : ENSORLT00000020542
Pongo
sp. (Orangutan) : ENSPPYT00000021400
Rattus
sp. (Rat) : XM_001065482
Macaca
sp. (Macaque) : XM_001089696
Monodelphis
sp. (Opossum) : XM_001373538
Gallus
sp. (Chicken) : XM_420037
Canis
sp. (Dog) : XM_543208
HIX0125046
HIT000460890
(
DQ594359
)
Representative transcript
(Non-protein coding transcript.)
genome : 10,824,386 - 10,824,415 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0125046)
HIX0125198
HIT000470824 (
ENST00000384868
)
(Non-protein coding transcript.)
genome : 10,892,716 - 10,892,812 (97)
query : 1 - 97 (97/97)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0125198)
HIX0125198
HIT000658320 (
NR_030328
)
(Non-protein coding transcript.)
genome : 10,892,716 - 10,892,812 (97)
query : 1 - 97 (97/97)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0125198)
HIX0095399
HIT000389420
(
BC127797
)
Representative transcript
(Hypothetical protein.)
genome : 10,896,315 - 10,897,785 (1,471)
query : 1 - 1,471 (1,471/1,471)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 12, nucl 11, cyto_nucl 7.5, E.R._mito 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0095399)
HIX0034553
HIT000095256
(
BC038544
)
Representative transcript
(Conserved hypothetical protein.)
genome : 10,920,162 - 10,924,599 (4,438)
query : 1 - 634 (634/670)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, cyto 14, nucl 12, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034553)
HIX0034553
HIT000631555 (
ENST00000532453
)
(Conserved hypothetical protein.)
genome : 10,920,157 - 10,924,599 (4,443)
query : 1 - 639 (639/639)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, cyto 14, nucl 12, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034553)
HIX0020807
HIT000011506
(
AK054892
)
Representative transcript
(Conserved hypothetical protein.)
genome : 10,950,579 - 10,952,548 (1,970)
query : 1 - 1,970 (1,970/1,970)
1 exon
identity = 0.994
3'(0.994)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, nucl 10.5, cyto 9.5, extr 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020807)
HIX0007311
HIT000714308 (
ENST00000602575
)
(Conserved hypothetical protein.)
genome : 10,962,201 - 10,964,214 (2,014)
query : 1 - 2,014 (2,014/2,014)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, mito 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007311)
HIX0007311
HIT000012733
(
AK056119
)
(Conserved hypothetical protein.)
genome : 10,962,658 - 10,965,184 (2,527)
query : 1 - 1,686 (1,686/1,686)
2 exons
identity = 0.988
3'(0.989;0.984)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, mito 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007311)
HIX0007311
HIT000328461
(
AB073660
)
Representative transcript
(Conserved hypothetical protein.)
genome : 10,964,717 - 10,966,718 (2,002)
query : 1 - 2,003 (2,003/2,003)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007311)
HIX0007311
HIT000629400 (
ENST00000530248
)
(Conserved hypothetical protein.)
genome : 10,965,298 - 10,967,236 (1,939)
query : 1 - 1,939 (1,939/1,939)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007311)
HIX0007311
HIT000246910
(
AJ305312
)
(Conserved hypothetical protein.)
genome : 10,965,301 - 10,967,236 (1,936)
query : 1 - 1,936 (1,936/1,936)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007311)
HIX0007310
HIT000628496 (
ENST00000529336
)
(XK-related protein 6 isoform b.)
genome : 10,969,155 - 11,058,343 (89,189)
query : 1 - 728 (728/728)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito 7, cyto_nucl 6, cyto 5, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007310)
HIX0034298
HIT000247105
(
AJ312027
)
Representative transcript
(Conserved hypothetical protein.)
genome : 10,980,891 - 10,983,574 (2,684)
query : 1 - 1,743 (1,743/1,743)
2 exons
identity = 0.998
3'(0.999;0.993)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, cyto_nucl 6, cyto 5.5, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034298)
HIX0034298
HIT000602403 (
ENST00000500944
)
(Hypothetical protein.)
genome : 10,980,891 - 10,983,574 (2,684)
query : 1 - 1,744 (1,744/1,744)
2 exons
identity = 0.998
3'(1.000;0.990)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, cyto_nucl 6, cyto 5.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034298)
HIX0034298
HIT000625856 (
ENST00000526648
)
(Hypothetical protein.)
genome : 10,980,891 - 10,983,574 (2,684)
query : 1 - 1,741 (1,741/1,741)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, cyto_nucl 6, cyto 5.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034298)
HIX0034298
HIT000391030
(
BC132979
)
(Conserved hypothetical protein.)
genome : 10,981,239 - 10,982,268 (1,030)
query : 1 - 1,031 (1,031/1,031)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, cyto_nucl 6, cyto 5.5, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034298)
HIX0034298
HIT000391004
(
BC132953
)
(Conserved hypothetical protein.)
genome : 10,981,242 - 10,982,268 (1,027)
query : 1 - 1,027 (1,027/1,027)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, cyto_nucl 6, cyto 5.5, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034298)
HIX0034297
HIT000247104
(
AJ312026
)
Representative transcript
(Conserved hypothetical protein.)
genome : 10,983,980 - 10,987,745 (3,766)
query : 1 - 2,179 (2,179/2,179)
2 exons
identity = 0.997
5'(0.997;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 10, cyto 9.5, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034297)
HIX0168833
HIT000483099 (
ENST00000400102
)
(Conserved hypothetical protein.)
genome : 10,983,980 - 10,987,745 (3,766)
query : 1 - 2,179 (2,179/2,179)
2 exons
identity = 0.997
3'(0.997;0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168833)
HIX0168833
HIT000501415
(
BC137525
)
Representative transcript
(Conserved hypothetical protein.)
genome : 10,984,314 - 10,987,275 (2,962)
query : 1 - 1,430 (1,430/1,430)
2 exons
identity = 0.984
3'(0.958;0.990)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168833)
HIX0034296
HIT000630673 (
ENST00000531549
)
(Conserved hypothetical protein.)
genome : 10,994,408 - 10,996,117 (1,710)
query : 1 - 1,710 (1,710/1,710)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 13.5, extr 6, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034296)
HIX0034296
HIT000246961
(
AJ307469
)
Representative transcript
(Conserved hypothetical protein.)
genome : 10,994,412 - 10,996,117 (1,706)
query : 1 - 1,706 (1,706/1,706)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 13.5, extr 6, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034296)
HIX0034296
HIT000263834
(
BC069683
)
(Conserved hypothetical protein.)
genome : 10,994,493 - 10,996,004 (1,512)
query : 1 - 1,512 (1,512/1,512)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 13.5, extr 6, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034296)
HIX0169051
HIT000592510 (
ENST00000488887
)
(Ribosomal protein L22/L17 family protein.)
genome : 11,032,560 - 11,033,079 (520)
query : 1 - 520 (520/520)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 13.5, nucl 9.5, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0169051)
HIX0007310
HIT000114768 (
ENST00000297303
)
(XK-related protein 6;)
genome : 11,051,945 - 11,058,848 (6,904)
query : 1 - 1,550 (1,550/1,550)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30.5, extr_plas 16
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007310)
HIX0007310
HIT000246858
(
AJ301560
)
(XK-related protein 6;)
genome : 11,051,976 - 11,058,848 (6,873)
query : 1 - 1,519 (1,519/1,519)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
InterPro :
IPR018629 : Transport protein XK
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30.5, extr_plas 16
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007310)
HIX0218317
HIT000714176 (
ENST00000602443
)
(Conserved hypothetical protein.)
genome : 11,060,474 - 11,061,180 (707)
query : 1 - 707 (707/707)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 8.5, mito 7, cyto_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218317)
HIX0034443
HIT000246859
(
AJ301561
)
Representative transcript
(Hypothetical short protein.)
genome : 11,105,135 - 11,125,374 (20,240)
query : 1 - 241 (241/241)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034443)
HIX0034443
HIT000541788 (
ENST00000443854
)
(Hypothetical short protein.)
genome : 11,105,135 - 11,125,374 (20,240)
query : 1 - 241 (241/241)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034443)
HIX0208374
HIT000587023 (
ENST00000483119
)
(Ribosomal protein L19/L19e domain containing protein.)
genome : 11,113,529 - 11,114,111 (583)
query : 1 - 583 (583/583)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 8, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208374)
HIX0208374
HIT000553224 (
ENST00000455290
)
(Ribosomal protein L19/L19e domain containing protein.)
genome : 11,113,765 - 11,114,112 (348)
query : 1 - 348 (348/348)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 8, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208374)
HIX0208455
HIT000611985 (
ENST00000512316
)
(Conserved hypothetical protein.)
genome : 11,138,873 - 11,140,010 (1,138)
query : 1 - 564 (564/564)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208455)
HIX0034664
HIT000246566
(
AJ291676
)
Representative transcript
(Myotubularin-related protein 9;)
genome : 11,141,009 - 11,142,577 (1,569)
query : 1 - 1,569 (1,569/1,569)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 10, extr_plas 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034664)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000021398
HIX0007312
HIT000103495 (
ENST00000221086
)
(Myotubularin-related protein 9;)
genome : 11,141,925 - 11,185,646 (43,722)
query : 1 - 7,472 (7,472/7,472)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14, nucl 3.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007312)
HIX0007312
HIT000205480 (
NM_015458
)
(Myotubularin-related protein 9;)
genome : 11,142,000 - 11,185,653 (43,654)
query : 1 - 7,404 (7,404/7,421)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14, nucl 3.5, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007312)
HIX0007312
HIT000051286
(
BC034990
)
(Myotubularin-related protein 9;)
genome : 11,142,000 - 11,182,697 (40,698)
query : 1 - 4,449 (4,449/4,464)
10 exons
identity = 0.999
5'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR010569 : Myotubularin-like phosphatase domain
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14, nucl 3.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007312)
HIX0007312
HIT000246758
(
AJ297823
)
Representative transcript
(Myotubularin-related protein 9;)
genome : 11,142,316 - 11,185,646 (43,331)
query : 1 - 7,081 (7,081/7,081)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR010569 : Myotubularin-like phosphatase domain
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14, nucl 3.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007312)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB168991
Gallus
sp. (Chicken) : AJ851634
Mus
sp. (Mouse) : AK035026
Rattus
sp. (Rat) : BC083644
Bos
sp. (Cow) : BC151329
Oryzias
sp. (Medaka) : ENSORLT00000020534
Pongo
sp. (Orangutan) : ENSPPYT00000021397
Tetraodon
sp. (Tetraodon) : GSTENT00030287001
Danio
sp. (Zebrafish) : NM_001045070
Takifugu
sp. (Fugu) : SINFRUT00000133865
Pan
sp. (Chimpanzee) : XM_001138621
Pan
sp. (Chimpanzee) : XM_001152370
Monodelphis
sp. (Opossum) : XM_001373496
Equus
sp. (Horse) : XM_001495580
Canis
sp. (Dog) : XM_843560
HIX0007312
HIT000002919
(
AK000444
)
(Myotubularin-related protein 9;)
genome : 11,142,317 - 11,181,207 (38,891)
query : 1 - 2,642 (2,642/2,661)
10 exons
identity = 0.999
5'(0.996;1.000;1.000;0.994;1.000;0.994;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14, nucl 3.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007312)
HIX0007312
HIT000331305
(
AK223525
)
(Myotubularin-related protein 9;)
genome : 11,142,317 - 11,180,997 (38,681)
query : 1 - 2,432 (2,432/2,432)
10 exons
identity = 0.999
5'(0.996;1.000;1.000;0.994;1.000;0.994;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR010569 : Myotubularin-like phosphatase domain
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14, nucl 3.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007312)
HIX0007312
HIT000498167
(
AK303543
)
(Myotubularin-related protein 9;)
genome : 11,142,328 - 11,180,398 (38,071)
query : 1 - 1,765 (1,765/1,765)
10 exons
identity = 0.995
5'(0.996;0.974;0.984;0.983;1.000;1.000;0.993;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR010569 : Myotubularin-like phosphatase domain
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14, nucl 3.5, mito 2, pero 2,
mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007312)
HIX0007312
HIT000054958
(
BX538176
)
(Myotubularin-related protein 9;)
genome : 11,142,336 - 11,182,019 (39,684)
query : 2 - 3,488 (3,487/3,505)
11 exons
identity = 1.000
5'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR010569 : Myotubularin-like phosphatase domain
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.5, nucl 9.5, cyto 8.5, mito 5, cysk 4,
extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007312)
HIX0007312
HIT000629352 (
ENST00000530200
)
(Myotubularin-related protein 9;)
genome : 11,142,336 - 11,182,019 (39,684)
query : 1 - 3,486 (3,486/3,503)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.5, nucl 9.5, cyto 8.5, mito 5, cysk 4,
extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007312)
HIX0007312
HIT000334763
(
BC093788
)
(Myotubularin-related protein 9;)
genome : 11,142,356 - 11,180,320 (37,965)
query : 1 - 1,716 (1,716/1,716)
10 exons
identity = 0.999
5'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR010569 : Myotubularin-like phosphatase domain
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14, nucl 3.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007312)
HIX0007312
HIT000336981
(
BC101623
)
(Myotubularin-related protein 9;)
genome : 11,142,356 - 11,180,320 (37,965)
query : 1 - 1,716 (1,716/1,716)
10 exons
identity = 0.999
5'(0.996;1.000;1.000;1.000;1.000;0.994;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR010569 : Myotubularin-like phosphatase domain
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14, nucl 3.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007312)
HIX0007312
HIT000039342
(
BC022003
)
(Myotubularin-related protein 9;)
genome : 11,142,364 - 11,180,573 (38,210)
query : 7 - 1,967 (1,961/1,982)
10 exons
identity = 0.998
5'(0.995;1.000;1.000;0.994;1.000;1.000;1.000;
0.995;1.000;1.000)3'
coverage = 0.997
InterPro :
IPR010569 : Myotubularin-like phosphatase domain
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14, nucl 3.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007312)
HIX0007312
HIT000625506 (
ENST00000526292
)
(Myotubularin-related protein 9;)
genome : 11,142,603 - 11,180,566 (37,964)
query : 1 - 1,960 (1,960/1,960)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, mito 11, nucl 4, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007312)
HIX0007312
HIT000489087
(
AK294463
)
(Myotubularin-related protein 9;)
genome : 11,142,655 - 11,180,566 (37,912)
query : 1 - 1,908 (1,908/1,908)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR010569 : Myotubularin-like phosphatase domain
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, mito 11, nucl 4, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007312)
HIX0007312
HIT000627569 (
ENST00000528389
)
(Myotubularin-related protein 9;)
genome : 11,152,284 - 11,158,286 (6,003)
query : 1 - 1,283 (1,283/1,283)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 24, cyto 4, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007312)
HIX0007312
HIT000005345
(
AK022071
)
(Conserved hypothetical protein.)
genome : 11,157,595 - 11,159,792 (2,198)
query : 1 - 2,201 (2,201/2,201)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007312)
HIX0025669
HIT000054441
(
BX537656
)
Representative transcript
(Myotubularin-related protein 9;)
genome : 11,173,375 - 11,182,938 (9,564)
query : 2 - 5,857 (5,856/5,876)
2 exons
identity = 0.998
3'(0.998;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025669)
HIX0025669
HIT000306665
(
CR749668
)
(Myotubularin-related protein 9;)
genome : 11,173,375 - 11,182,938 (9,564)
query : 2 - 5,857 (5,856/5,876)
2 exons
identity = 0.998
3'(0.998;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025669)
HIX0025669
HIT000602075 (
ENST00000498997
)
(Disrupted in schizophrenia 1 protein isoform c.)
genome : 11,173,374 - 11,182,938 (9,565)
query : 1 - 5,850 (5,850/5,850)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 2, mito 2, cyto_mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025669)
HIX0007312
HIT000024299
(
AL080178
)
(Myotubularin-related protein 9;)
genome : 11,177,194 - 11,182,019 (4,826)
query : 18 - 2,057 (2,040/2,066)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.992
InterPro :
IPR010569 : Myotubularin-like phosphatase domain
IPR029021 : Protein-tyrosine phosphatase-like
GO :
0016311 : Biological Process : dephosphorylation
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 11, mito 6, extr 4, nucl 3.5,
mito_pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007312)
HIX0034420
HIT000070457
(
AF124367
)
Representative transcript
(Hypothetical short protein.)
genome : 11,181,416 - 11,182,018 (603)
query : 1 - 605 (605/614)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034420)
HIX0007312
HIT000064294
(
AF052099
)
(Conserved hypothetical protein.)
genome : 11,182,741 - 11,184,479 (1,739)
query : 1 - 1,738 (1,738/1,755)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 10, cyto_nucl 9, extr 4, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007312)
HIX0007312
HIT000089508
(
BC017985
)
(Conserved hypothetical protein.)
genome : 11,183,460 - 11,184,474 (1,015)
query : 1 - 1,009 (1,009/1,030)
1 exon
identity = 0.992
5'(0.992)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, extr 11, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007312)
HIX0034293
HIT000363713_01 (
ENST00000382435
)
(Solute carrier family 35 member G5; Acyl-malonyl-condensing enzyme 1-like protein 2;)
genome : 11,188,397 - 11,189,696 (1,300)
query : 1 - 1,300 (1,300/1,321)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034293)
HIX0034293
HIT000211641 (
NM_054028
)
(Solute carrier family 35 member G5; Acyl-malonyl-condensing enzyme 1-like protein 2;)
genome : 11,188,495 - 11,189,695 (1,201)
query : 1 - 1,201 (1,201/1,201)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034293)
HIX0034293
HIT000246567
(
AJ291677
)
Representative transcript
(Solute carrier family 35 member G5; Acyl-malonyl-condensing enzyme 1-like protein 2;)
genome : 11,188,495 - 11,189,695 (1,201)
query : 1 - 1,201 (1,201/1,201)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR000620 : EamA domain
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034293)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : ENSPTRT00000037037
HIX0034293
HIT000510402_02 (
ENST00000412468
)
(Solute carrier family 35 member G6; Acyl-malonyl-condensing enzyme 1-like protein 3; Transmembrane protein 21B;)
genome : 11,188,501 - 11,189,695 (1,195)
query : 1 - 1,195 (1,195/1,195)
1 exon
identity = 0.967
5'(0.967)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034293)
HIX0034293
HIT000390598
(
BC131696
)
(Solute carrier family 35 member G5; Acyl-malonyl-condensing enzyme 1-like protein 2;)
genome : 11,188,528 - 11,189,674 (1,147)
query : 1 - 1,147 (1,147/1,147)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR000620 : EamA domain
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034293)
HIX0034293
HIT000699842_01 (
ENST00000588001
)
(Solute carrier family 35 member G4; Acyl-malonyl-condensing enzyme 1-like protein 1;)
genome : 11,188,565 - 11,189,698 (1,134)
query : 1 - 1,134 (1,134/1,134)
1 exon
identity = 0.965
5'(0.965)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034293)
HIX0034293
HIT000697583_01 (
ENST00000585729
)
(Solute carrier family 35 member G4; Acyl-malonyl-condensing enzyme 1-like protein 1;)
genome : 11,189,141 - 11,189,629 (489)
query : 1 - 489 (489/489)
1 exon
identity = 0.978
5'(0.978)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034293)
HIX0007313
HIT000124639 (
ENST00000326605
)
(NAD-dependent epimerase/dehydratase, N-terminal domain containing protein.)
genome : 11,197,187 - 11,223,597 (26,411)
query : 1 - 1,442 (1,442/1,442)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 13, nucl 8.5, cyto_mito 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007313)
HIX0034554
HIT000095258
(
BC038546
)
Representative transcript
(Conserved hypothetical protein.)
genome : 11,203,257 - 11,204,999 (1,743)
query : 1 - 1,040 (1,040/1,067)
3 exons
identity = 0.994
3'(0.985;0.994;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 8.5, cyto_nucl 7.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034554)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : XM_001174150
HIX0034554
HIT000625088 (
ENST00000525867
)
(Conserved hypothetical protein.)
genome : 11,203,257 - 11,205,011 (1,755)
query : 1 - 1,099 (1,099/1,099)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 8.5, cyto_nucl 7.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034554)
HIX0034554
HIT000462847
(
DQ596316
)
(Non-protein coding transcript.)
genome : 11,203,874 - 11,203,903 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034554)
HIX0007313
HIT000014369
(
AK057762
)
(NAD(P)-binding domain containing protein.)
genome : 11,205,154 - 11,223,597 (18,444)
query : 1 - 1,422 (1,422/1,422)
8 exons
identity = 0.996
5'(1.000;0.982;0.995;1.000;0.972;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR016040 : NAD(P)-binding domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23.5, cyto_mito 15, mito_pero 12.6667,
cyto_nucl 4.66667, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007313)
HIX0007313
HIT000633363 (
ENST00000534302
)
(NAD(P)-binding domain containing protein.)
genome : 11,205,154 - 11,223,597 (18,444)
query : 1 - 1,421 (1,421/1,421)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007313)
HIX0007313
HIT000265490
(
BC074983
)
(NAD(P)-binding domain containing protein.)
genome : 11,213,608 - 11,222,336 (8,729)
query : 16 - 602 (587/602)
5 exons
identity = 0.997
5'(0.995;1.000;0.986;1.000;1.000)3'
coverage = 0.975
InterPro :
IPR016040 : NAD(P)-binding domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23.5, cyto_mito 15, mito_pero 12.6667,
cyto_nucl 4.66667, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007313)
HIX0007313
HIT000084423
(
AY101186
)
Representative transcript
(NAD-dependent epimerase/dehydratase, N-terminal domain containing protein.)
genome : 11,213,629 - 11,223,231 (9,603)
query : 1 - 1,019 (1,019/1,019)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001509 : NAD-dependent epimerase/dehydratase, N-terminal domain
IPR016040 : NAD(P)-binding domain
GO :
0003824 : Molecular Function : catalytic activity
0044237 : Biological Process : cellular metabolic process
0050662 : Molecular Function : coenzyme binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007313)
HIX0007313
HIT000084424
(
AY101187
)
(NAD(P)-binding domain containing protein.)
genome : 11,213,629 - 11,223,231 (9,603)
query : 1 - 935 (935/935)
7 exons
identity = 0.999
5'(1.000;1.000;0.986;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR016040 : NAD(P)-binding domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24.5, cyto_mito 15.1667, mito_pero 13.1667,
cyto_nucl 3.66667, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007313)
HIX0007313
HIT000624893 (
ENST00000525664
)
(NAD(P)-binding domain containing protein.)
genome : 11,213,629 - 11,223,231 (9,603)
query : 1 - 935 (935/935)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007313)
HIX0007313
HIT000630882 (
ENST00000531764
)
(NAD-dependent epimerase/dehydratase, N-terminal domain containing protein.)
genome : 11,213,629 - 11,222,312 (8,684)
query : 1 - 693 (693/693)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007313)
HIX0218109
HIT000628466 (
ENST00000529305
)
(Conserved hypothetical protein.)
genome : 11,247,933 - 11,292,510 (44,578)
query : 1 - 800 (800/800)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 11, nucl 2.5, cyto_nucl 2.5, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218109)
HIX0218109
HIT000265827
(
BC080558
)
Representative transcript
(Conserved hypothetical protein.)
genome : 11,251,633 - 11,296,167 (44,535)
query : 1 - 1,357 (1,357/1,375)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.996;1.000;0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, extr 8, mito 5, cyto 4, extr_plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218109)
HIX0218204
HIT000070455
(
AF124365
)
Representative transcript
(Hypothetical protein.)
genome : 11,279,055 - 11,279,767 (713)
query : 1 - 721 (721/729)
1 exon
identity = 0.978
3'(0.978)5'
coverage = 0.989
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 11, plas 8, cyto_pero 8, pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218204)
HIX0007314
HIT000053305
(
BC048214
)
(Protein FAM167A.)
genome : 11,280,882 - 11,332,226 (51,345)
query : 1 - 1,373 (1,373/1,390)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
InterPro :
IPR024280 : FAM167
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 8.5, nucl 7.5, cyto 6.5,
extr_plas 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007314)
HIX0007314
HIT000091859
(
BC029587
)
Representative transcript
(Protein FAM167A.)
genome : 11,280,882 - 11,324,262 (43,381)
query : 1 - 1,457 (1,457/1,472)
6 exons
identity = 0.992
3'(0.994;0.996;1.000;0.986;0.991;0.992)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 9.5, cyto 8.5, nucl 7.5,
extr_plas 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007314)
HIX0007314
HIT000630688 (
ENST00000531564
)
(FAM167 family protein.)
genome : 11,280,903 - 11,301,210 (20,308)
query : 1 - 1,325 (1,325/1,325)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 8.5, nucl 7.5, cyto 6.5,
extr_plas 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007314)
HIX0007314
HIT000633369 (
ENST00000534308
)
(FAM167 family protein.)
genome : 11,281,360 - 11,302,395 (21,036)
query : 1 - 1,642 (1,642/1,642)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 13, nucl 8, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007314)
HIX0007314
HIT000626645 (
ENST00000527445
)
(FAM167 family protein.)
genome : 11,281,452 - 11,332,224 (50,773)
query : 1 - 801 (801/801)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 8.5, nucl 7.5, cyto 6.5,
extr_plas 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007314)
HIX0007314
HIT000423501
(
AK290704
)
(Protein FAM167A;)
genome : 11,281,527 - 11,302,878 (21,352)
query : 1 - 1,620 (1,620/1,620)
3 exons
identity = 0.999
3'(1.000;0.999;0.996)5'
coverage = 1.000
InterPro :
IPR024280 : FAM167
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14.5, nucl 8, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007314)
HIX0007314
HIT000628065 (
ENST00000528897
)
(FAM167 family protein.)
genome : 11,281,527 - 11,302,878 (21,352)
query : 1 - 1,620 (1,620/1,620)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 13, nucl 8, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007314)
HIX0007314
HIT000390458
(
BC131495
)
(FAM167 family protein.)
genome : 11,281,754 - 11,302,049 (20,296)
query : 1 - 902 (902/902)
2 exons
identity = 0.997
3'(1.000;0.994)5'
coverage = 1.000
InterPro :
IPR024280 : FAM167
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14.5, nucl 8, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007314)
HIX0218109
HIT000632656 (
ENST00000533578
)
(Conserved hypothetical protein.)
genome : 11,291,429 - 11,296,167 (4,739)
query : 1 - 883 (883/883)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, extr 8, mito 5, cyto 4, extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218109)
HIX0007314
HIT000630921 (
ENST00000531804
)
(Conserved hypothetical protein.)
genome : 11,301,647 - 11,325,103 (23,457)
query : 1 - 1,120 (1,120/1,120)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007314)
HIX0007314
HIT000627299 (
ENST00000528111
)
(Non-protein coding transcript.)
genome : 11,302,086 - 11,324,244 (22,159)
query : 1 - 712 (712/712)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007314)
HIX0034421
HIT000070458
(
AF124368
)
Representative transcript
(Conserved hypothetical protein.)
genome : 11,329,966 - 11,331,213 (1,248)
query : 1 - 1,249 (1,249/1,260)
1 exon
identity = 0.994
3'(0.994)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, mito 5, cyto 3.5, cyto_nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034421)
HIX0007315
HIT000216677
(
S76617
)
(Tyrosine-protein kinase Blk; EC=2.7.10.2; B lymphocyte kinase; p55-Blk;)
genome : 11,351,510 - 11,422,108 (70,599)
query : 1 - 2,595 (2,595/2,608)
13 exons
identity = 0.994
5'(0.988;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994;1.000;1.000;0.985;0.993)3'
coverage = 1.000
EC number :
EC 2.7.10.2
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR000980 : SH2 domain
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR001452 : SH3 domain
IPR020635 : Tyrosine-protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0004713 : Molecular Function : protein tyrosine kinase activity
0005515 : Molecular Function : protein binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_mito 10.1667, cyto 10, mito 10, cyto_nucl 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007315)
HIX0007315
HIT000107428 (
ENST00000259089
)
(Tyrosine-protein kinase Blk; EC=2.7.10.2; B lymphocyte kinase; p55-Blk;)
genome : 11,351,510 - 11,422,113 (70,604)
query : 1 - 2,606 (2,606/2,606)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.2
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_mito 11.1667, cyto 11, mito 11, cyto_nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007315)
HIX0007315
HIT000198652 (
NM_001715
)
(Tyrosine-protein kinase Blk; EC=2.7.10.2; B lymphocyte kinase; p55-Blk;)
genome : 11,351,521 - 11,422,108 (70,588)
query : 1 - 2,590 (2,590/2,642)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.2
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_mito 11.1667, cyto 11, mito 11, cyto_nucl 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007315)
HIX0007315
HIT000089684
(
BC018703
)
(Tyrosine-protein kinase Blk; EC=2.7.10.2; B lymphocyte kinase; p55-Blk;)
genome : 11,351,657 - 11,422,108 (70,452)
query : 1 - 2,215 (2,215/2,242)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;0.990;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.2
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR000980 : SH2 domain
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR001452 : SH3 domain
IPR020635 : Tyrosine-protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0004713 : Molecular Function : protein tyrosine kinase activity
0005515 : Molecular Function : protein binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 18.5, cyto 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007315)
HIX0007315
HIT000086368
(
BC004473
)
(Hypothetical short protein.)
genome : 11,351,678 - 11,367,398 (15,721)
query : 1 - 1,163 (1,163/1,181)
2 exons
identity = 0.997
5'(0.995;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 7, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007315)
HIX0007315
HIT000095264
(
BC038555
)
(Hypothetical short protein.)
genome : 11,351,678 - 11,367,398 (15,721)
query : 1 - 1,163 (1,163/1,181)
2 exons
identity = 0.997
5'(0.995;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 7, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007315)
HIX0007315
HIT000624626 (
ENST00000525389
)
(Hypothetical short protein.)
genome : 11,351,678 - 11,367,400 (15,723)
query : 1 - 1,165 (1,165/1,165)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 7, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007315)
HIX0007315
HIT000326958
(
Z33998
)
(Tyrosine-protein kinase Blk; EC=2.7.10.2; B lymphocyte kinase; p55-Blk;)
genome : 11,351,880 - 11,422,108 (70,229)
query : 1 - 2,231 (2,231/2,235)
13 exons
identity = 0.998
5'(0.995;1.000;1.000;1.000;0.990;1.000;1.000;
1.000;0.989;1.000;1.000;1.000;0.999)3'
coverage = 0.998
EC number :
EC 2.7.10.2
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR000980 : SH2 domain
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR001452 : SH3 domain
IPR020635 : Tyrosine-protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0004713 : Molecular Function : protein tyrosine kinase activity
0005515 : Molecular Function : protein binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_mito 11.1667, cyto 11, mito 11, cyto_nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007315)
HIX0007315
HIT000629046 (
ENST00000529894
)
(Tyrosine-protein kinase Blk; EC=2.7.10.2; B lymphocyte kinase; p55-Blk;)
genome : 11,351,899 - 11,422,037 (70,139)
query : 1 - 2,017 (2,017/2,017)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.2
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, nucl 3, pero 3, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007315)
HIX0007315
HIT000041531_03
(
BC032413
)
Representative transcript
(Tyrosine-protein kinase Blk; EC=2.7.10.2; B lymphocyte kinase; p55-Blk;)
genome : 11,351,912 - 11,422,108 (70,197)
query : 1 - 2,199 (2,199/2,251)
13 exons
identity = 0.999
5'(0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994;1.000;1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 2.7.10.2
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR000980 : SH2 domain
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR001452 : SH3 domain
IPR020635 : Tyrosine-protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0004713 : Molecular Function : protein tyrosine kinase activity
0005515 : Molecular Function : protein binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_mito 11.1667, cyto 11, mito 11, cyto_nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007315)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK089888
Rattus
sp. (Rat) : BC098683
Bos
sp. (Cow) : BC123559
Gallus
sp. (Chicken) : ENSGALT00000026890
Oryzias
sp. (Medaka) : ENSORLT00000015922
Pongo
sp. (Orangutan) : ENSPPYT00000021392
Tetraodon
sp. (Tetraodon) : GSTENT00030294001
Danio
sp. (Zebrafish) : NM_001030220
Takifugu
sp. (Fugu) : SINFRUT00000161248
Macaca
sp. (Macaque) : XM_001087480
Monodelphis
sp. (Opossum) : XM_001381609
Equus
sp. (Horse) : XM_001497947
Canis
sp. (Dog) : XM_543206
Pan
sp. (Chimpanzee) : XR_023106
HIX0007315
HIT000432617
(
AK313751
)
(Tyrosine-protein kinase Blk; EC=2.7.10.2; B lymphocyte kinase; p55-Blk;)
genome : 11,351,932 - 11,421,617 (69,686)
query : 1 - 1,688 (1,688/1,688)
13 exons
identity = 0.999
5'(0.994;1.000;1.000;1.000;0.990;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.2
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR000980 : SH2 domain
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR001452 : SH3 domain
IPR020635 : Tyrosine-protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0004713 : Molecular Function : protein tyrosine kinase activity
0005515 : Molecular Function : protein binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_mito 11.1667, cyto 11, mito 11, cyto_nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007315)
HIX0007315
HIT000033177
(
BC007371
)
(Tyrosine-protein kinase Blk; EC=2.7.10.2; B lymphocyte kinase; p55-Blk;)
genome : 11,351,958 - 11,422,105 (70,148)
query : 1 - 2,150 (2,150/2,201)
13 exons
identity = 0.999
5'(0.993;1.000;1.000;1.000;0.990;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.2
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR000980 : SH2 domain
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
IPR001452 : SH3 domain
IPR020635 : Tyrosine-protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0004713 : Molecular Function : protein tyrosine kinase activity
0005515 : Molecular Function : protein binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_mito 11.1667, cyto 11, mito 11, cyto_nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007315)
HIX0007315
HIT000632902 (
ENST00000533828
)
(Tyrosine-protein kinase Blk; EC=2.7.10.2; B lymphocyte kinase; p55-Blk;)
genome : 11,403,240 - 11,406,612 (3,373)
query : 1 - 547 (547/547)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.2
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 13.5, mito 4, nucl 3, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007315)
HIX0007315
HIT000625986 (
ENST00000526778
)
(Tyrosine-protein kinase Blk; EC=2.7.10.2; B lymphocyte kinase; p55-Blk;)
genome : 11,407,503 - 11,414,297 (6,795)
query : 1 - 700 (700/700)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.2
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, nucl 3, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007315)
HIX0218320
HIT000714359 (
ENST00000602626
)
(Conserved hypothetical protein.)
genome : 11,409,997 - 11,410,500 (504)
query : 1 - 504 (504/504)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218320)
HIX0209030
HIT000627114 (
ENST00000527922
)
(Conserved hypothetical protein.)
genome : 11,410,733 - 11,411,716 (984)
query : 1 - 435 (435/435)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto_nucl 5, nucl 4, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209030)
HIX0209034
HIT000627804 (
ENST00000528629
)
(Hypothetical short protein.)
genome : 11,413,760 - 11,415,531 (1,772)
query : 1 - 544 (544/544)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209034)
HIX0209066
HIT000632406 (
ENST00000533322
)
(Conserved hypothetical protein.)
genome : 11,415,975 - 11,417,529 (1,555)
query : 1 - 594 (594/594)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 6.5, cyto_nucl 6.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209066)
HIX0007315
HIT000027787
(
AL832875
)
(Tyrosine-protein kinase Blk; EC=2.7.10.2; B lymphocyte kinase; p55-Blk;)
genome : 11,417,842 - 11,422,106 (4,265)
query : 1 - 1,947 (1,947/1,965)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.999
EC number :
EC 2.7.10.2
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
InterPro :
IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 15.5, cyto 10.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007315)
HIX0007315
HIT000625313 (
ENST00000526097
)
(Tyrosine-protein kinase Blk; EC=2.7.10.2; B lymphocyte kinase; p55-Blk;)
genome : 11,417,842 - 11,422,108 (4,267)
query : 1 - 1,949 (1,949/1,949)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.10.2
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 15.5, cyto 10.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007315)
HIX0168887
HIT000249607
(
AK131319
)
Representative transcript
(Tyrosine-protein kinase Blk; EC=2.7.10.2; B lymphocyte kinase; p55-Blk;)
genome : 11,419,350 - 11,422,203 (2,854)
query : 1 - 2,854 (2,854/2,854)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
EC number :
EC 2.7.10.2
KEGG pathway :
04660 : T cell receptor signaling pathway (2)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 4, mito 4, mito_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168887)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : ENSMMUT00000039141
Pongo
sp. (Orangutan) : ENSPPYT00000021393
Pan
sp. (Chimpanzee) : ENSPTRT00000055914
HIX0034294
HIT000116672 (
ENST00000304233
)
(Conserved hypothetical protein.)
genome : 11,433,822 - 11,438,851 (5,030)
query : 1 - 2,150 (2,150/2,150)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 12.5, extr 7, cyto 7,
cyto_pero 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034294)
HIX0034294
HIT000246568
(
AJ291678
)
Representative transcript
(Conserved hypothetical protein.)
genome : 11,434,044 - 11,438,850 (4,807)
query : 1 - 1,927 (1,927/1,927)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 12.5, extr 7, cyto 7,
cyto_pero 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034294)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000021391
Pan
sp. (Chimpanzee) : ENSPTRT00000037045
HIX0034294
HIT000726096 (
NR_040035
)
(Conserved hypothetical protein.)
genome : 11,434,044 - 11,438,850 (4,807)
query : 1 - 1,927 (1,927/1,927)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 12.5, extr 7, cyto 7,
cyto_pero 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034294)
HIX0218088
HIT000558447
(
FJ169610
)
(Hypothetical short protein.)
genome : 11,534,469 - 11,565,869 (31,401)
query : 1 - 877 (877/877)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218088)
HIX0218088
HIT000632064 (
ENST00000532977
)
(Hypothetical short protein.)
genome : 11,534,469 - 11,565,869 (31,401)
query : 1 - 877 (877/877)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218088)
HIX0218088
HIT000626182 (
ENST00000526974
)
(Hypothetical short protein.)
genome : 11,550,135 - 11,565,890 (15,756)
query : 1 - 832 (832/832)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218088)
HIX0218088
HIT000093183
(
BC033672
)
Representative transcript
(Transcription factor GATA-4; GATA-binding factor 4;)
genome : 11,561,731 - 11,566,171 (4,441)
query : 1 - 1,010 (1,010/1,010)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR008013 : GATA-type transcription activator, N-terminal
IPR028436 : Transcription factor GATA-4
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0045893 : Biological Process : positive regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 13.5, extr 7, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218088)
HIX0218088
HIT000627217 (
ENST00000528027
)
(Transcription factor GATA-4 family protein.)
genome : 11,561,731 - 11,566,171 (4,441)
query : 1 - 1,010 (1,010/1,010)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 13.5, extr 7, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218088)
HIX0218088
HIT000077247
(
AF318320
)
(Transcription factor GATA-4 family protein.)
genome : 11,565,528 - 11,568,034 (2,507)
query : 1 - 2,508 (2,508/2,525)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
InterPro :
IPR008013 : GATA-type transcription activator, N-terminal
IPR028436 : Transcription factor GATA-4
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0045893 : Biological Process : positive regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 14.5, cyto 7.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218088)
HIX0218272
HIT000625237 (
ENST00000526021
)
(Transcription factor GATA-4 family protein.)
genome : 11,614,002 - 11,616,274 (2,273)
query : 1 - 1,064 (1,064/1,064)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto_nucl 4, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218272)
HIX0218084
HIT000072802
(
AF180736
)
Representative transcript
(Hypothetical protein.)
genome : 11,616,559 - 11,617,504 (946)
query : 1 - 947 (947/947)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, mito 9, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218084)
HIX0218084
HIT000262938
(
BC068079
)
(Hypothetical protein.)
genome : 11,616,593 - 11,617,507 (915)
query : 1 - 915 (915/933)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, mito 9, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218084)
HIX0007317
HIT000012148
(
AK055534
)
Representative transcript
(Conserved hypothetical protein.)
genome : 11,618,765 - 11,620,732 (1,968)
query : 1 - 1,971 (1,971/1,971)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007317)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : ENSPTRT00000037048
HIX0007317
HIT000390996
(
BC132945
)
(Conserved hypothetical protein.)
genome : 11,618,896 - 11,620,309 (1,414)
query : 1 - 1,412 (1,412/1,412)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007317)
HIX0007317
HIT000500866
(
BC136882
)
(Conserved hypothetical protein.)
genome : 11,618,896 - 11,620,309 (1,414)
query : 1 - 1,416 (1,416/1,416)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007317)
HIX0007317
HIT000624289 (
ENST00000525043
)
(Conserved hypothetical protein.)
genome : 11,618,896 - 11,620,309 (1,414)
query : 1 - 1,414 (1,414/1,414)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 26, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007317)
HIX0007318
HIT000534684 (
ENST00000436750
)
(Endonuclease 8-like 2; EC=3.2.2.-; EC=4.2.99.18; DNA glycosylase/AP lyase Neil2; DNA-(apurinic or apyrimidinic site) lyase Neil2; Endonuclease VIII-like 2; Nei homolog 2; NEH2; Nei-like protein 2;)
genome : 11,627,148 - 11,644,854 (17,707)
query : 1 - 2,226 (2,226/2,226)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.2.-
,
EC 4.2.99.18
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, cyto_nucl 11.3333, mito 10,
cyto_pero 7.16667, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007318)
HIX0007318
HIT000213058 (
NM_145043
)
(Endonuclease 8-like 2; EC=3.2.2.-; EC=4.2.99.18; DNA glycosylase/AP lyase Neil2; DNA-(apurinic or apyrimidinic site) lyase Neil2; Endonuclease VIII-like 2; Nei homolog 2; NEH2; Nei-like protein 2;)
genome : 11,627,172 - 11,644,854 (17,683)
query : 1 - 2,746 (2,746/2,746)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.2.-
,
EC 4.2.99.18
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, cyto_nucl 11.3333, mito 10,
cyto_pero 7.16667, nucl 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007318)
HIX0007318
HIT000560182 (
NM_001135746
)
(Endonuclease 8-like 2; EC=3.2.2.-; EC=4.2.99.18; DNA glycosylase/AP lyase Neil2; DNA-(apurinic or apyrimidinic site) lyase Neil2; Endonuclease VIII-like 2; Nei homolog 2; NEH2; Nei-like protein 2;)
genome : 11,627,172 - 11,644,854 (17,683)
query : 1 - 2,202 (2,202/2,202)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.2.-
,
EC 4.2.99.18
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, cyto_nucl 11.3333, mito 10,
cyto_pero 7.16667, nucl 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007318)
HIX0007318
HIT000560183 (
NM_001135747
)
(Endonuclease 8-like 2 isoform b.)
genome : 11,627,172 - 11,644,854 (17,683)
query : 1 - 2,062 (2,062/2,062)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 4.2.99.18
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 13.5, extr 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007318)
HIX0007318
HIT000560184 (
NM_001135748
)
(Endonuclease 8-like 2; EC=3.2.2.-; EC=4.2.99.18; DNA glycosylase/AP lyase Neil2; DNA-(apurinic or apyrimidinic site) lyase Neil2; Endonuclease VIII-like 2; Nei homolog 2; NEH2; Nei-like protein 2;)
genome : 11,627,172 - 11,644,854 (17,683)
query : 1 - 2,016 (2,016/2,016)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.2.-
,
EC 4.2.99.18
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, extr 10, cyto_nucl 8.33333, mito 7,
cyto_pero 6.66667
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007318)
HIX0007318
HIT000553147 (
ENST00000455213
)
(Endonuclease 8-like 2; EC=3.2.2.-; EC=4.2.99.18; DNA glycosylase/AP lyase Neil2; DNA-(apurinic or apyrimidinic site) lyase Neil2; Endonuclease VIII-like 2; Nei homolog 2; NEH2; Nei-like protein 2;)
genome : 11,627,208 - 11,644,849 (17,642)
query : 1 - 2,323 (2,323/2,323)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.2.-
,
EC 4.2.99.18
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, cyto_nucl 11.3333, mito 10,
cyto_pero 7.16667, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007318)
HIX0007318
HIT000022243
(
AK097389
)
(Endonuclease 8-like 2 isoform b.)
genome : 11,627,218 - 11,644,854 (17,637)
query : 1 - 2,015 (2,015/2,015)
4 exons
identity = 0.997
5'(1.000;1.000;0.995;0.996)3'
coverage = 1.000
EC number :
EC 4.2.99.18
InterPro :
IPR000214 : Zinc finger, DNA glycosylase/AP lyase-type
IPR010979 : Ribosomal protein S13-like, H2TH
IPR015886 : DNA glycosylase/AP lyase, H2TH DNA-binding
GO :
0003676 : Molecular Function : nucleic acid binding
0003684 : Molecular Function : damaged DNA binding
0003906 : Molecular Function : DNA-(apurinic or apyrimidinic site) lyase activity
0006281 : Biological Process : DNA repair
0006289 : Biological Process : nucleotide-excision repair
0008270 : Molecular Function : zinc ion binding
0016799 : Molecular Function : hydrolase activity, hydrolyzing N-glycosyl compounds
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 13.5, extr 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007318)
HIX0007318
HIT000504483 (
ENST00000403422
)
(Endonuclease 8-like 2 isoform b.)
genome : 11,627,218 - 11,644,854 (17,637)
query : 1 - 2,016 (2,016/2,016)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 4.2.99.18
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 13.5, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007318)
HIX0007318
HIT000488848
(
AK294224
)
(Endonuclease 8-like 2 isoform c.)
genome : 11,627,219 - 11,643,883 (16,665)
query : 1 - 997 (997/997)
5 exons
identity = 0.997
5'(1.000;1.000;1.000;0.995;0.995)3'
coverage = 1.000
EC number :
EC 4.2.99.18
InterPro :
IPR000214 : Zinc finger, DNA glycosylase/AP lyase-type
IPR010979 : Ribosomal protein S13-like, H2TH
IPR015886 : DNA glycosylase/AP lyase, H2TH DNA-binding
GO :
0003676 : Molecular Function : nucleic acid binding
0003684 : Molecular Function : damaged DNA binding
0003906 : Molecular Function : DNA-(apurinic or apyrimidinic site) lyase activity
0006281 : Biological Process : DNA repair
0006289 : Biological Process : nucleotide-excision repair
0008270 : Molecular Function : zinc ion binding
0016799 : Molecular Function : hydrolase activity, hydrolyzing N-glycosyl compounds
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, extr 10, cyto_nucl 8.33333, mito 7,
cyto_pero 6.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007318)
HIX0007318
HIT000627504 (
ENST00000528323
)
(Endonuclease 8-like 2 isoform c.)
genome : 11,627,219 - 11,643,883 (16,665)
query : 1 - 998 (998/998)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 4.2.99.18
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, extr 10, cyto_nucl 8.33333, mito 7,
cyto_pero 6.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007318)
HIX0007318
HIT000627301 (
ENST00000528113
)
(Endonuclease 8-like 2 isoform a.)
genome : 11,627,219 - 11,643,606 (16,388)
query : 1 - 554 (554/554)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 4.2.99.18
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, extr 8, nucl 6, mito 6, cyto_golg 6,
mito_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007318)
HIX0007318
HIT000384967
(
AK225837
)
(Endonuclease 8-like 2; EC=3.2.2.-; EC=4.2.99.18; DNA glycosylase/AP lyase Neil2; DNA-(apurinic or apyrimidinic site) lyase Neil2; Endonuclease VIII-like 2; Nei homolog 2; NEH2; Nei-like protein 2;)
genome : 11,627,246 - 11,644,616 (17,371)
query : 1 - 1,883 (1,883/1,883)
5 exons
identity = 0.995
5'(1.000;1.000;0.992;1.000;0.994)3'
coverage = 1.000
EC number :
EC 3.2.2.-
,
EC 4.2.99.18
InterPro :
IPR000214 : Zinc finger, DNA glycosylase/AP lyase-type
IPR010979 : Ribosomal protein S13-like, H2TH
IPR015886 : DNA glycosylase/AP lyase, H2TH DNA-binding
GO :
0003676 : Molecular Function : nucleic acid binding
0003684 : Molecular Function : damaged DNA binding
0003906 : Molecular Function : DNA-(apurinic or apyrimidinic site) lyase activity
0006281 : Biological Process : DNA repair
0006289 : Biological Process : nucleotide-excision repair
0008270 : Molecular Function : zinc ion binding
0016799 : Molecular Function : hydrolase activity, hydrolyzing N-glycosyl compounds
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.3333, cyto 11, nucl 8.5, mito_nucl 8.5,
mito 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007318)
HIX0007318
HIT000112496 (
ENST00000284503
)
(Endonuclease 8-like 2; EC=3.2.2.-; EC=4.2.99.18; DNA glycosylase/AP lyase Neil2; DNA-(apurinic or apyrimidinic site) lyase Neil2; Endonuclease VIII-like 2; Nei homolog 2; NEH2; Nei-like protein 2;)
genome : 11,627,248 - 11,644,855 (17,608)
query : 1 - 2,671 (2,671/2,671)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.2.-
,
EC 4.2.99.18
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, cyto_nucl 11.3333, mito 10,
cyto_pero 7.16667, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007318)
HIX0007318
HIT000054314
(
BX537529
)
(Endonuclease 8-like 2; EC=3.2.2.-; EC=4.2.99.18; DNA glycosylase/AP lyase Neil2; DNA-(apurinic or apyrimidinic site) lyase Neil2; Endonuclease VIII-like 2; Nei homolog 2; NEH2; Nei-like protein 2;)
genome : 11,627,257 - 11,644,854 (17,598)
query : 2 - 2,072 (2,071/2,091)
6 exons
identity = 0.994
5'(0.977;1.000;1.000;0.991;1.000;0.994)3'
coverage = 0.999
EC number :
EC 3.2.2.-
,
EC 4.2.99.18
InterPro :
IPR000214 : Zinc finger, DNA glycosylase/AP lyase-type
IPR010979 : Ribosomal protein S13-like, H2TH
IPR012319 : DNA glycosylase/AP lyase, catalytic domain
IPR015886 : DNA glycosylase/AP lyase, H2TH DNA-binding
GO :
0003676 : Molecular Function : nucleic acid binding
0003684 : Molecular Function : damaged DNA binding
0003906 : Molecular Function : DNA-(apurinic or apyrimidinic site) lyase activity
0006281 : Biological Process : DNA repair
0006284 : Biological Process : base-excision repair
0006289 : Biological Process : nucleotide-excision repair
0008270 : Molecular Function : zinc ion binding
0016799 : Molecular Function : hydrolase activity, hydrolyzing N-glycosyl compounds
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.3333, cyto 11, mito 9, cyto_pero 6.66667,
nucl 6.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007318)
HIX0007318
HIT000012820
(
AK056206
)
Representative transcript
(Endonuclease 8-like 2; EC=3.2.2.-; EC=4.2.99.18; DNA glycosylase/AP lyase Neil2; DNA-(apurinic or apyrimidinic site) lyase Neil2; Endonuclease VIII-like 2; Nei homolog 2; NEH2; Nei-like protein 2;)
genome : 11,627,257 - 11,644,854 (17,598)
query : 1 - 2,661 (2,661/2,661)
5 exons
identity = 0.997
5'(0.998;1.000;1.000;0.995;0.996)3'
coverage = 1.000
EC number :
EC 3.2.2.-
,
EC 4.2.99.18
InterPro :
IPR000214 : Zinc finger, DNA glycosylase/AP lyase-type
IPR010979 : Ribosomal protein S13-like, H2TH
IPR012319 : DNA glycosylase/AP lyase, catalytic domain
IPR015886 : DNA glycosylase/AP lyase, H2TH DNA-binding
GO :
0003676 : Molecular Function : nucleic acid binding
0003684 : Molecular Function : damaged DNA binding
0003906 : Molecular Function : DNA-(apurinic or apyrimidinic site) lyase activity
0006281 : Biological Process : DNA repair
0006284 : Biological Process : base-excision repair
0006289 : Biological Process : nucleotide-excision repair
0008270 : Molecular Function : zinc ion binding
0016799 : Molecular Function : hydrolase activity, hydrolyzing N-glycosyl compounds
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, cyto_nucl 11.3333, mito 10,
cyto_pero 7.16667, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007318)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB046628
Mus
sp. (Mouse) : BC115762
Gallus
sp. (Chicken) : BX950724
Pongo
sp. (Orangutan) : CR859018
Bos
sp. (Cow) : NM_001013003
Rattus
sp. (Rat) : XM_001064764
Monodelphis
sp. (Opossum) : XM_001381598
Equus
sp. (Horse) : XM_001495888
Pan
sp. (Chimpanzee) : XM_519606
Canis
sp. (Dog) : XM_543204
HIX0007318
HIT000036422
(
BC013952
)
(Endonuclease 8-like 2; EC=3.2.2.-; EC=4.2.99.18; DNA glycosylase/AP lyase Neil2; DNA-(apurinic or apyrimidinic site) lyase Neil2; Endonuclease VIII-like 2; Nei homolog 2; NEH2; Nei-like protein 2;)
genome : 11,627,258 - 11,644,854 (17,597)
query : 1 - 2,116 (2,116/2,187)
5 exons
identity = 0.996
5'(1.000;1.000;1.000;0.995;0.994)3'
coverage = 1.000
EC number :
EC 3.2.2.-
,
EC 4.2.99.18
InterPro :
IPR000214 : Zinc finger, DNA glycosylase/AP lyase-type
IPR010979 : Ribosomal protein S13-like, H2TH
IPR012319 : DNA glycosylase/AP lyase, catalytic domain
IPR015886 : DNA glycosylase/AP lyase, H2TH DNA-binding
GO :
0003676 : Molecular Function : nucleic acid binding
0003684 : Molecular Function : damaged DNA binding
0003906 : Molecular Function : DNA-(apurinic or apyrimidinic site) lyase activity
0006281 : Biological Process : DNA repair
0006284 : Biological Process : base-excision repair
0006289 : Biological Process : nucleotide-excision repair
0008270 : Molecular Function : zinc ion binding
0016799 : Molecular Function : hydrolase activity, hydrolyzing N-glycosyl compounds
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, cyto_nucl 11.3333, mito 10,
cyto_pero 7.16667, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007318)
HIX0007318
HIT000036431
(
BC013964
)
(Endonuclease 8-like 2; EC=3.2.2.-; EC=4.2.99.18; DNA glycosylase/AP lyase Neil2; DNA-(apurinic or apyrimidinic site) lyase Neil2; Endonuclease VIII-like 2; Nei homolog 2; NEH2; Nei-like protein 2;)
genome : 11,627,258 - 11,644,854 (17,597)
query : 1 - 2,116 (2,116/2,187)
5 exons
identity = 0.996
5'(1.000;1.000;1.000;0.995;0.994)3'
coverage = 1.000
EC number :
EC 3.2.2.-
,
EC 4.2.99.18
InterPro :
IPR000214 : Zinc finger, DNA glycosylase/AP lyase-type
IPR010979 : Ribosomal protein S13-like, H2TH
IPR012319 : DNA glycosylase/AP lyase, catalytic domain
IPR015886 : DNA glycosylase/AP lyase, H2TH DNA-binding
GO :
0003676 : Molecular Function : nucleic acid binding
0003684 : Molecular Function : damaged DNA binding
0003906 : Molecular Function : DNA-(apurinic or apyrimidinic site) lyase activity
0006281 : Biological Process : DNA repair
0006284 : Biological Process : base-excision repair
0006289 : Biological Process : nucleotide-excision repair
0008270 : Molecular Function : zinc ion binding
0016799 : Molecular Function : hydrolase activity, hydrolyzing N-glycosyl compounds
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, cyto_nucl 11.3333, mito 10,
cyto_pero 7.16667, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007318)
HIX0007318
HIT000061349
(
AB079070
)
(Endonuclease 8-like 2; EC=3.2.2.-; EC=4.2.99.18; DNA glycosylase/AP lyase Neil2; DNA-(apurinic or apyrimidinic site) lyase Neil2; Endonuclease VIII-like 2; Nei homolog 2; NEH2; Nei-like protein 2;)
genome : 11,628,957 - 11,643,782 (14,826)
query : 1 - 999 (999/999)
4 exons
identity = 0.999
5'(1.000;0.997;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.2.-
,
EC 4.2.99.18
InterPro :
IPR000214 : Zinc finger, DNA glycosylase/AP lyase-type
IPR010979 : Ribosomal protein S13-like, H2TH
IPR012319 : DNA glycosylase/AP lyase, catalytic domain
IPR015886 : DNA glycosylase/AP lyase, H2TH DNA-binding
GO :
0003676 : Molecular Function : nucleic acid binding
0003684 : Molecular Function : damaged DNA binding
0003906 : Molecular Function : DNA-(apurinic or apyrimidinic site) lyase activity
0006281 : Biological Process : DNA repair
0006284 : Biological Process : base-excision repair
0006289 : Biological Process : nucleotide-excision repair
0008270 : Molecular Function : zinc ion binding
0016799 : Molecular Function : hydrolase activity, hydrolyzing N-glycosyl compounds
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, cyto_nucl 11.3333, mito 10,
cyto_pero 7.16667, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007318)
HIX0007318
HIT000623991 (
ENST00000524741
)
(Endonuclease 8-like 2 isoform c.)
genome : 11,640,121 - 11,644,165 (4,045)
query : 1 - 1,482 (1,482/1,482)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 4.2.99.18
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 7, cyto 2, mito 2, cyto_mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007318)
HIX0124804
HIT000445349
(
DQ578818
)
Representative transcript
(Non-protein coding transcript.)
genome : 11,643,504 - 11,643,533 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0124804)
HIX0007318
HIT000098241
(
BC045822
)
(Endonuclease 8-like 2 isoform c.)
genome : 11,643,547 - 11,644,854 (1,308)
query : 1 - 1,311 (1,311/1,327)
1 exon
identity = 0.993
5'(0.993)3'
coverage = 0.999
EC number :
EC 4.2.99.18
InterPro :
IPR000214 : Zinc finger, DNA glycosylase/AP lyase-type
GO :
0003906 : Molecular Function : DNA-(apurinic or apyrimidinic site) lyase activity
0006281 : Biological Process : DNA repair
0008270 : Molecular Function : zinc ion binding
0016799 : Molecular Function : hydrolase activity, hydrolyzing N-glycosyl compounds
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 3, cyto 3, cyto_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007318)
HIX0152448
HIT000444965
(
DQ578434
)
Representative transcript
(Non-protein coding transcript.)
genome : 11,643,991 - 11,644,020 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0152448)
HIX0007318
HIT000457410
(
DQ590879
)
(Non-protein coding transcript.)
genome : 11,644,726 - 11,644,757 (32)
query : 1 - 32 (32/32)
1 exon
identity = 0.969
5'(0.969)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007318)
HIX0201320
HIT000522443 (
ENST00000424509
)
(Transcriptional coactivator p15 (PC4) domain containing protein.)
genome : 11,647,514 - 11,647,897 (384)
query : 1 - 384 (384/384)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201320)
HIX0201320
HIT000623676_02 (
ENST00000524415
)
(Transcriptional coactivator p15 (PC4) domain containing protein.)
genome : 11,647,514 - 11,647,895 (382)
query : 1 - 382 (382/382)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201320)
HIX0201320
HIT000264129
(
BC070171
)
Representative transcript
(Non-protein coding transcript.)
genome : 11,647,514 - 11,647,595 (82)
query : 1 - 82 (82/111)
1 exon
identity = 0.988
5'(0.988)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201320)
HIX0208291
HIT000630523 (
ENST00000531395
)
(Conserved hypothetical protein.)
genome : 11,655,437 - 11,660,021 (4,585)
query : 1 - 811 (811/811)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208291)
HIX0208291
HIT000632486 (
ENST00000533405
)
(Conserved hypothetical protein.)
genome : 11,659,219 - 11,660,077 (859)
query : 1 - 459 (459/471)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 9, cyto_pero 6.83333, cyto_nucl 6.5,
mito 3, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208291)
HIX0218171
HIT000624801 (
ENST00000525571
)
(Conserved hypothetical protein.)
genome : 11,660,277 - 11,661,341 (1,065)
query : 1 - 810 (810/810)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 7, extr_plas 7, cyto 6, mito_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218171)
HIX0218171
HIT000626251 (
ENST00000527045
)
(Conserved hypothetical protein.)
genome : 11,660,293 - 11,661,324 (1,032)
query : 1 - 642 (642/642)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, mito 11, cyto_mito 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218171)
HIX0218171
HIT000624782 (
ENST00000525551
)
(Hypothetical short protein.)
genome : 11,660,604 - 11,661,009 (406)
query : 1 - 327 (327/327)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, mito 4, cyto_nucl 4, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218171)
HIX0168873
HIT000488169
(
AK293545
)
Representative transcript
(Squalene synthase; SQS; SS; EC=2.5.1.21; FPP:FPP farnesyltransferase; Farnesyl-diphosphate farnesyltransferase;)
genome : 11,665,452 - 11,696,349 (30,898)
query : 1 - 1,761 (1,761/1,761)
8 exons
identity = 0.997
5'(0.992;1.000;1.000;1.000;0.995;1.000;1.000;
0.998)3'
coverage = 1.000
EC number :
EC 2.5.1.21
KEGG pathway :
00909 : Sesquiterpenoid and triterpenoid biosynthesis (64)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR002060 : Squalene/phytoene synthase
IPR006449 : Farnesyl-diphosphate farnesyltransferase
IPR008949 : Isoprenoid synthase domain
IPR019845 : Squalene/phytoene synthase, conserved site
GO :
0004310 : Molecular Function : farnesyl-diphosphate farnesyltransferase activity
0008610 : Biological Process : lipid biosynthetic process
0009058 : Biological Process : biosynthetic process
0016021 : Cellular Component : integral component of membrane
0016740 : Molecular Function : transferase activity
0016765 : Molecular Function : transferase activity, transferring alkyl or aryl (other than methyl) groups
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 12.5, nucl 11, cysk 10, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168873)
HIX0168873
HIT000629808 (
ENST00000530664
)
(Squalene synthase; SQS; SS; EC=2.5.1.21; FPP:FPP farnesyltransferase; Farnesyl-diphosphate farnesyltransferase;)
genome : 11,665,452 - 11,696,349 (30,898)
query : 1 - 1,761 (1,761/1,761)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.21
KEGG pathway :
00909 : Sesquiterpenoid and triterpenoid biosynthesis (64)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 12.5, nucl 11, cysk 10, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168873)
HIX0168873
HIT000500144
(
AK316531
)
(Squalene synthase; SQS; SS; EC=2.5.1.21; FPP:FPP farnesyltransferase; Farnesyl-diphosphate farnesyltransferase;)
genome : 11,665,740 - 11,696,230 (30,491)
query : 1 - 1,354 (1,354/1,354)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.995;1.000;0.993;
1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.21
KEGG pathway :
00909 : Sesquiterpenoid and triterpenoid biosynthesis (64)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR002060 : Squalene/phytoene synthase
IPR006449 : Farnesyl-diphosphate farnesyltransferase
IPR008949 : Isoprenoid synthase domain
IPR019845 : Squalene/phytoene synthase, conserved site
GO :
0004310 : Molecular Function : farnesyl-diphosphate farnesyltransferase activity
0008610 : Biological Process : lipid biosynthetic process
0009058 : Biological Process : biosynthetic process
0016021 : Cellular Component : integral component of membrane
0016740 : Molecular Function : transferase activity
0016765 : Molecular Function : transferase activity, transferring alkyl or aryl (other than methyl) groups
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 12.5, nucl 11, cysk 10, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168873)
HIX0168873
HIT000625174 (
ENST00000525954
)
(Squalene synthase; SQS; SS; EC=2.5.1.21; FPP:FPP farnesyltransferase; Farnesyl-diphosphate farnesyltransferase;)
genome : 11,665,926 - 11,696,476 (30,551)
query : 1 - 1,890 (1,890/1,890)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.21
KEGG pathway :
00909 : Sesquiterpenoid and triterpenoid biosynthesis (64)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 13, cyto_nucl 8.83333, nucl 7, cyto 6.5,
E.R._mito 6.5, cyto_pero 5.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168873)
HIX0168873
HIT000499795
(
AK316182
)
(Squalene synthase; SQS; SS; EC=2.5.1.21; FPP:FPP farnesyltransferase; Farnesyl-diphosphate farnesyltransferase;)
genome : 11,665,960 - 11,696,476 (30,517)
query : 1 - 1,850 (1,850/1,850)
7 exons
identity = 0.996
5'(0.984;1.000;1.000;0.995;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.21
KEGG pathway :
00909 : Sesquiterpenoid and triterpenoid biosynthesis (64)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR002060 : Squalene/phytoene synthase
IPR006449 : Farnesyl-diphosphate farnesyltransferase
IPR008949 : Isoprenoid synthase domain
IPR019845 : Squalene/phytoene synthase, conserved site
GO :
0004310 : Molecular Function : farnesyl-diphosphate farnesyltransferase activity
0008610 : Biological Process : lipid biosynthetic process
0009058 : Biological Process : biosynthetic process
0016021 : Cellular Component : integral component of membrane
0016740 : Molecular Function : transferase activity
0016765 : Molecular Function : transferase activity, transferring alkyl or aryl (other than methyl) groups
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 13, cyto_nucl 8.83333, nucl 7, cyto 6.5,
E.R._mito 6.5, cyto_pero 5.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168873)
HIX0168873
HIT000492492
(
AK297868
)
(Squalene synthase; SQS; SS; EC=2.5.1.21; FPP:FPP farnesyltransferase; Farnesyl-diphosphate farnesyltransferase;)
genome : 11,665,977 - 11,696,128 (30,152)
query : 1 - 1,485 (1,485/1,485)
7 exons
identity = 0.995
5'(0.986;1.000;1.000;0.995;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.21
KEGG pathway :
00909 : Sesquiterpenoid and triterpenoid biosynthesis (64)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR002060 : Squalene/phytoene synthase
IPR006449 : Farnesyl-diphosphate farnesyltransferase
IPR008949 : Isoprenoid synthase domain
IPR019845 : Squalene/phytoene synthase, conserved site
GO :
0004310 : Molecular Function : farnesyl-diphosphate farnesyltransferase activity
0008610 : Biological Process : lipid biosynthetic process
0009058 : Biological Process : biosynthetic process
0016021 : Cellular Component : integral component of membrane
0016740 : Molecular Function : transferase activity
0016765 : Molecular Function : transferase activity, transferring alkyl or aryl (other than methyl) groups
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 13, cyto_nucl 8.83333, nucl 7, cyto 6.5,
E.R._mito 6.5, cyto_pero 5.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168873)
HIX0168873
HIT000630852 (
ENST00000531733
)
(Squalene synthase; SQS; SS; EC=2.5.1.21; FPP:FPP farnesyltransferase; Farnesyl-diphosphate farnesyltransferase;)
genome : 11,665,999 - 11,667,485 (1,487)
query : 1 - 712 (712/712)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.21
KEGG pathway :
00909 : Sesquiterpenoid and triterpenoid biosynthesis (64)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, extr 11, cyto 5, cyto_nucl 4.33333,
cyto_pero 3.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168873)
HIX0168873
HIT000630381 (
ENST00000531249
)
(Squalene synthase; SQS; SS; EC=2.5.1.21; FPP:FPP farnesyltransferase; Farnesyl-diphosphate farnesyltransferase;)
genome : 11,666,019 - 11,683,605 (17,587)
query : 1 - 768 (768/768)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.21
KEGG pathway :
00909 : Sesquiterpenoid and triterpenoid biosynthesis (64)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto_nucl 7.83333, cyto 7.5, extr 6, nucl 6,
cyto_pero 5.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168873)
HIX0168873
HIT000631374 (
ENST00000532266
)
(Squalene synthase; SQS; SS; EC=2.5.1.21; FPP:FPP farnesyltransferase; Farnesyl-diphosphate farnesyltransferase;)
genome : 11,666,300 - 11,687,784 (21,485)
query : 1 - 583 (583/583)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.21
KEGG pathway :
00909 : Sesquiterpenoid and triterpenoid biosynthesis (64)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto_nucl 4, cyto 3.5, E.R. 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168873)
HIX0168873
HIT000500147
(
AK316534
)
(Squalene synthase; SQS; SS; EC=2.5.1.21; FPP:FPP farnesyltransferase; Farnesyl-diphosphate farnesyltransferase;)
genome : 11,666,653 - 11,696,623 (29,971)
query : 1 - 1,909 (1,909/1,909)
7 exons
identity = 0.997
5'(0.994;1.000;1.000;0.990;1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 2.5.1.21
KEGG pathway :
00909 : Sesquiterpenoid and triterpenoid biosynthesis (64)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR002060 : Squalene/phytoene synthase
IPR006449 : Farnesyl-diphosphate farnesyltransferase
IPR008949 : Isoprenoid synthase domain
IPR019845 : Squalene/phytoene synthase, conserved site
GO :
0004310 : Molecular Function : farnesyl-diphosphate farnesyltransferase activity
0008610 : Biological Process : lipid biosynthetic process
0009058 : Biological Process : biosynthetic process
0016021 : Cellular Component : integral component of membrane
0016740 : Molecular Function : transferase activity
0016765 : Molecular Function : transferase activity, transferring alkyl or aryl (other than methyl) groups
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, E.R. 5, lyso 3, golg 3, E.R._mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168873)
HIX0168873
HIT000627817 (
ENST00000528643
)
(Squalene synthase; SQS; SS; EC=2.5.1.21; FPP:FPP farnesyltransferase; Farnesyl-diphosphate farnesyltransferase;)
genome : 11,666,653 - 11,696,623 (29,971)
query : 1 - 1,909 (1,909/1,909)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.21
KEGG pathway :
00909 : Sesquiterpenoid and triterpenoid biosynthesis (64)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, E.R. 5, lyso 3, golg 3, E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168873)
HIX0168873
HIT000494683
(
AK300059
)
(Squalene synthase; SQS; SS; EC=2.5.1.21; FPP:FPP farnesyltransferase; Farnesyl-diphosphate farnesyltransferase;)
genome : 11,666,763 - 11,696,385 (29,623)
query : 1 - 1,561 (1,561/1,561)
7 exons
identity = 0.998
5'(1.000;1.000;1.000;0.995;1.000;0.993;0.998)3'
coverage = 1.000
EC number :
EC 2.5.1.21
KEGG pathway :
00909 : Sesquiterpenoid and triterpenoid biosynthesis (64)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR002060 : Squalene/phytoene synthase
IPR006449 : Farnesyl-diphosphate farnesyltransferase
IPR008949 : Isoprenoid synthase domain
IPR019845 : Squalene/phytoene synthase, conserved site
GO :
0004310 : Molecular Function : farnesyl-diphosphate farnesyltransferase activity
0008610 : Biological Process : lipid biosynthetic process
0009058 : Biological Process : biosynthetic process
0016021 : Cellular Component : integral component of membrane
0016740 : Molecular Function : transferase activity
0016765 : Molecular Function : transferase activity, transferring alkyl or aryl (other than methyl) groups
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, E.R. 5, lyso 3, golg 3, E.R._mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168873)
HIX0168873
HIT000625002 (
ENST00000525777
)
(Squalene synthase; SQS; SS; EC=2.5.1.21; FPP:FPP farnesyltransferase; Farnesyl-diphosphate farnesyltransferase;)
genome : 11,666,765 - 11,696,122 (29,358)
query : 1 - 1,472 (1,472/1,472)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.21
KEGG pathway :
00909 : Sesquiterpenoid and triterpenoid biosynthesis (64)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, cyto_nucl 5, nucl 4, cyto 4, mito 2, pero 2,
lyso 2, mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168873)
HIX0168873
HIT000627901 (
ENST00000528729
)
(Squalene synthase; SQS; SS; EC=2.5.1.21; FPP:FPP farnesyltransferase; Farnesyl-diphosphate farnesyltransferase;)
genome : 11,679,290 - 11,689,105 (9,816)
query : 1 - 570 (570/570)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.21
KEGG pathway :
00909 : Sesquiterpenoid and triterpenoid biosynthesis (64)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto 10, extr 7, cyto_nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168873)
HIX0168873
HIT000628677 (
ENST00000529521
)
(Squalene synthase; SQS; SS; EC=2.5.1.21; FPP:FPP farnesyltransferase; Farnesyl-diphosphate farnesyltransferase;)
genome : 11,687,789 - 11,689,303 (1,515)
query : 1 - 418 (418/418)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.21
KEGG pathway :
00909 : Sesquiterpenoid and triterpenoid biosynthesis (64)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 16, extr 12, cyto_nucl 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168873)
HIX0168873
HIT000023038
(
AK098208
)
(Squalene synthase; SQS; SS; EC=2.5.1.21; FPP:FPP farnesyltransferase; Farnesyl-diphosphate farnesyltransferase;)
genome : 11,693,726 - 11,696,487 (2,762)
query : 1 - 2,762 (2,762/2,762)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
EC number :
EC 2.5.1.21
KEGG pathway :
00909 : Sesquiterpenoid and triterpenoid biosynthesis (64)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 17, nucl 12, cyto 12, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168873)
HIX0218045
HIT000625692 (
ENST00000526481
)
(Peptidase C1A family protein.)
genome : 11,700,033 - 11,703,302 (3,270)
query : 1 - 660 (660/660)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 12.5, extr 5, nucl 4.5, golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218045)
HIX0218045
HIT000022238
(
AK097384
)
Representative transcript
(Cathepsin B; EC=3.4.22.1; APP secretase; APPS; Cathepsin B1; Contains: Cathepsin B light chain; Contains: Cathepsin B heavy chain; Precursor;)
genome : 11,700,036 - 11,706,212 (6,177)
query : 1 - 2,391 (2,391/2,391)
6 exons
identity = 0.996
3'(1.000;0.993;1.000;1.000;1.000;0.997)5'
coverage = 1.000
EC number :
EC 3.4.22.1
InterPro :
IPR000668 : Peptidase C1A, papain C-terminal
IPR013128 : Peptidase C1A
IPR015643 : Peptidase C1A, cathepsin B
IPR025660 : Cysteine peptidase, histidine active site
IPR025661 : Cysteine peptidase, asparagine active site
GO :
0006508 : Biological Process : proteolysis
0008234 : Molecular Function : cysteine-type peptidase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, mito 9, nucl 3, lyso 3, plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218045)
HIX0218045
HIT000023126
(
AK098296
)
(Conserved hypothetical protein.)
genome : 11,700,036 - 11,701,789 (1,754)
query : 1 - 1,752 (1,752/1,752)
1 exon
identity = 0.986
3'(0.986)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 11, extr 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218045)
HIX0218045
HIT000048345
(
AK128472
)
(Cathepsin B; EC=3.4.22.1; APP secretase; APPS; Cathepsin B1; Contains: Cathepsin B light chain; Contains: Cathepsin B heavy chain; Precursor;)
genome : 11,700,469 - 11,704,421 (3,953)
query : 1 - 3,951 (3,951/3,951)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
EC number :
EC 3.4.22.1
InterPro :
IPR000668 : Peptidase C1A, papain C-terminal
IPR013128 : Peptidase C1A
IPR025660 : Cysteine peptidase, histidine active site
IPR025661 : Cysteine peptidase, asparagine active site
GO :
0006508 : Biological Process : proteolysis
0008234 : Molecular Function : cysteine-type peptidase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18, cyto 14, nucl 10, extr 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218045)
HIX0218045
HIT000518626 (
ENST00000420692
)
(Peptidase C1A family protein.)
genome : 11,701,529 - 11,706,212 (4,684)
query : 1 - 2,230 (2,230/2,230)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, mito 9, nucl 3, lyso 3, plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218045)
HIX0218045
HIT000194210
(
M13230
)
(Peptidase C1A family protein.)
genome : 11,702,634 - 11,706,610 (3,977)
query : 1 - 630 (630/630)
6 exons
identity = 0.987
3'(1.000;1.000;0.940;1.000;0.988;1.000)5'
coverage = 1.000
InterPro :
IPR000668 : Peptidase C1A, papain C-terminal
IPR013128 : Peptidase C1A
IPR015643 : Peptidase C1A, cathepsin B
IPR025660 : Cysteine peptidase, histidine active site
IPR025661 : Cysteine peptidase, asparagine active site
GO :
0006508 : Biological Process : proteolysis
0008234 : Molecular Function : cysteine-type peptidase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 11.5, extr 9, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218045)
HIX0218045
HIT000629769 (
ENST00000530624
)
(Peptidase C1A, papain C-terminal domain containing protein.)
genome : 11,703,170 - 11,706,018 (2,849)
query : 1 - 430 (430/430)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 3.5, cyto_nucl 3.33333,
cyto_pero 2.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218045)
HIX0218045
HIT000326083
(
Y18460
)
(Peptidase C1A family protein.)
genome : 11,703,189 - 11,706,681 (3,493)
query : 7 - 585 (579/585)
5 exons
identity = 0.981
3'(1.000;0.991;1.000;1.000;0.922)5'
coverage = 0.990
InterPro :
IPR000668 : Peptidase C1A, papain C-terminal
IPR013128 : Peptidase C1A
IPR015643 : Peptidase C1A, cathepsin B
IPR025660 : Cysteine peptidase, histidine active site
GO :
0006508 : Biological Process : proteolysis
0008234 : Molecular Function : cysteine-type peptidase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 4, nucl 2, mito 2, cyto_pero 2,
cyto_plas 2, mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218045)
HIX0218045
HIT000714444 (
ENST00000602711
)
(Hypothetical short protein.)
genome : 11,703,663 - 11,703,900 (238)
query : 1 - 238 (238/238)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218045)
HIX0218045
HIT000631512 (
ENST00000532409
)
(Peptidase C1A, papain C-terminal domain containing protein.)
genome : 11,704,602 - 11,707,087 (2,486)
query : 1 - 839 (839/839)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, mito 4, cyto 3.5, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218045)
HIX0218045
HIT000629442 (
ENST00000530290
)
(Peptidase C1A, papain C-terminal domain containing protein.)
genome : 11,704,626 - 11,706,136 (1,511)
query : 1 - 498 (498/498)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 4, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218045)
HIX0218045
HIT000632196 (
ENST00000533110
)
(Peptidase C1A, papain C-terminal domain containing protein.)
genome : 11,705,188 - 11,707,556 (2,369)
query : 1 - 399 (399/399)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 3, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218045)
HIX0218045
HIT000625409 (
ENST00000526195
)
(Peptidase C1A, cathepsin B family protein.)
genome : 11,706,555 - 11,726,244 (19,690)
query : 1 - 560 (560/560)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218045)
HIX0218045
HIT000626446 (
ENST00000527243
)
(Peptidase C1A family protein.)
genome : 11,706,570 - 11,719,977 (13,408)
query : 1 - 580 (580/580)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218045)
HIX0218045
HIT000633211 (
ENST00000534149
)
(Peptidase C1A family protein.)
genome : 11,706,571 - 11,726,248 (19,678)
query : 1 - 524 (524/524)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218045)
HIX0218045
HIT000625853 (
ENST00000526645
)
(Peptidase C1A family protein.)
genome : 11,706,593 - 11,726,222 (19,630)
query : 1 - 559 (559/559)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218045)
HIX0218045
HIT000624557 (
ENST00000525315
)
(Peptidase C1A, propeptide domain containing protein.)
genome : 11,708,124 - 11,710,971 (2,848)
query : 1 - 586 (586/586)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218045)
HIX0218045
HIT000631474 (
ENST00000532370
)
(Peptidase C1A family protein.)
genome : 11,708,374 - 11,711,328 (2,955)
query : 1 - 693 (693/693)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218045)
HIX0218045
HIT000605624 (
ENST00000505496
)
(Peptidase C1A family protein.)
genome : 11,708,398 - 11,725,549 (17,152)
query : 1 - 540 (540/540)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218045)
HIX0218045
HIT000623757 (
ENST00000524500
)
(Peptidase C1A, cathepsin B family protein.)
genome : 11,708,406 - 11,725,579 (17,174)
query : 1 - 573 (573/573)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218045)
HIX0218045
HIT000630627 (
ENST00000531502
)
(Peptidase C1A family protein.)
genome : 11,708,426 - 11,725,627 (17,202)
query : 1 - 557 (557/557)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218045)
HIX0218045
HIT000633440 (
ENST00000534382
)
(Peptidase C1A, propeptide domain containing protein.)
genome : 11,710,119 - 11,726,957 (16,839)
query : 1 - 764 (764/764)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218045)
HIX0218045
HIT000631753 (
ENST00000532656
)
(Peptidase C1A, propeptide domain containing protein.)
genome : 11,710,119 - 11,725,623 (15,505)
query : 1 - 573 (573/573)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218045)
HIX0218045
HIT000626418 (
ENST00000527215
)
(Peptidase C1A, propeptide domain containing protein.)
genome : 11,710,126 - 11,725,598 (15,473)
query : 1 - 545 (545/545)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218045)
HIX0218045
HIT000628131 (
ENST00000528965
)
(Peptidase C1A, propeptide domain containing protein.)
genome : 11,710,165 - 11,725,039 (14,875)
query : 1 - 556 (556/556)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218045)
HIX0218045
HIT000623906 (
ENST00000524654
)
(Conserved hypothetical protein.)
genome : 11,710,867 - 11,712,434 (1,568)
query : 1 - 368 (368/368)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto_nucl 7, nucl 6, extr 4, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218045)
HIX0218045
HIT000631496 (
ENST00000532392
)
(Hypothetical short protein.)
genome : 11,710,902 - 11,725,598 (14,697)
query : 1 - 570 (570/570)
4 exons
identity = 0.993
3'(1.000;0.968;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218045)
HIX0025625
HIT000047181
(
AK127308
)
Representative transcript
(Conserved hypothetical protein.)
genome : 11,712,015 - 11,716,926 (4,912)
query : 1 - 3,494 (3,494/3,494)
2 exons
identity = 0.993
5'(0.987;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, extr 11, cyto_nucl 5.5, extr_plas 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025625)
HIX0218045
HIT000193398
(
L38712
)
(Hypothetical short protein.)
genome : 11,718,870 - 11,718,988 (119)
query : 1 - 119 (119/119)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218045)
HIX0209006
HIT000624495 (
ENST00000525252
)
(Protein of unknown function DUF1370, TMEM126 family protein.)
genome : 11,753,359 - 11,754,379 (1,021)
query : 1 - 377 (377/377)
2 exons
identity = 0.984
3'(0.993;0.963)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 10.5, nucl 9.5, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209006)
HIX0209003
HIT000623741 (
ENST00000524483
)
(Conserved hypothetical protein.)
genome : 11,777,409 - 11,778,318 (910)
query : 1 - 910 (910/910)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 27, plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209003)
HIX0209073
HIT000134457_03 (
ENST00000341827
)
(Olfactory receptor family protein.)
genome : 11,786,101 - 11,787,015 (915)
query : 1 - 900 (900/900)
1 exon
identity = 0.984
3'(0.984)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209073)
HIX0209073
HIT000632796_02 (
ENST00000533722
)
(Olfactory receptor family protein.)
genome : 11,786,106 - 11,787,072 (967)
query : 1 - 967 (967/967)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209073)
HIX0124926
HIT000452421
(
DQ585890
)
Representative transcript
(Non-protein coding transcript.)
genome : 11,816,399 - 11,816,428 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0124926)
HIX0058457
HIT000340990
(
DQ012026
)
Representative transcript
(Beta-defensin 136; Defensin, beta 136; Precursor;)
genome : 11,831,446 - 11,832,108 (663)
query : 1 - 237 (237/237)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058457)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK139898
Rattus
sp. (Rat) : AY621371
Bos
sp. (Cow) : ENSBTAT00000049417
Equus
sp. (Horse) : ENSECAT00000001603
Pongo
sp. (Orangutan) : ENSPPYT00000021384
Macaca
sp. (Macaque) : XM_001085891
HIX0058457
HIT000363487 (
ENST00000382209
)
(Beta-defensin 136; Defensin, beta 136; Precursor;)
genome : 11,831,446 - 11,832,108 (663)
query : 1 - 237 (237/237)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058457)
HIX0058457
HIT000366101 (
NM_001033018
)
(Beta-defensin 136; Defensin, beta 136; Precursor;)
genome : 11,831,446 - 11,832,108 (663)
query : 1 - 237 (237/237)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058457)
HIX0058457
HIT000332018
(
AY621333
)
(Beta-defensin 136; Defensin, beta 136; Precursor;)
genome : 11,831,464 - 11,832,108 (645)
query : 1 - 219 (219/222)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.986
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058457)
HIX0058456
HIT000340989
(
DQ012025
)
Representative transcript
(Beta-defensin 135; Defensin, beta 135; Precursor;)
genome : 11,839,830 - 11,842,099 (2,270)
query : 1 - 234 (234/234)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR025933 : Beta-defensin
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058456)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK010780
Rattus
sp. (Rat) : AY600146
Canis
sp. (Dog) : DQ012004
Pan
sp. (Chimpanzee) : DQ012086
Pongo
sp. (Orangutan) : ENSPPYT00000021383
Macaca
sp. (Macaque) : XM_001084559
HIX0058456
HIT000363486 (
ENST00000382208
)
(Beta-defensin 135; Defensin, beta 135; Precursor;)
genome : 11,839,830 - 11,842,099 (2,270)
query : 1 - 234 (234/234)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058456)
HIX0058456
HIT000366100 (
NM_001033017
)
(Beta-defensin 135; Defensin, beta 135; Precursor;)
genome : 11,839,830 - 11,842,099 (2,270)
query : 1 - 234 (234/234)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058456)
HIX0058456
HIT000332017
(
AY621332
)
(Beta-defensin 135; Defensin, beta 135; Precursor;)
genome : 11,839,830 - 11,842,063 (2,234)
query : 1 - 198 (198/201)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.985
InterPro :
IPR025933 : Beta-defensin
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058456)
HIX0058455
HIT000625649 (
ENST00000526438
)
(Beta-defensin 134; Defensin, beta 134; Precursor;)
genome : 11,850,692 - 11,853,821 (3,130)
query : 1 - 1,059 (1,059/1,059)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058455)
HIX0058455
HIT000363483 (
ENST00000382205
)
(Beta-defensin 134; Defensin, beta 134; Precursor;)
genome : 11,851,437 - 11,853,821 (2,385)
query : 1 - 314 (314/314)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058455)
HIX0058455
HIT000390251
(
BC130461
)
Representative transcript
(Beta-defensin 134; Defensin, beta 134; Precursor;)
genome : 11,851,437 - 11,853,821 (2,385)
query : 1 - 314 (314/314)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
InterPro :
IPR025933 : Beta-defensin
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058455)
Ortholog candidate ( ->
Evola
)
Canis
sp. (Dog) : DQ012003
Pan
sp. (Chimpanzee) : DQ012085
Macaca
sp. (Macaque) : XM_001085780
HIX0058455
HIT000390253
(
BC130463
)
(Beta-defensin 134; Defensin, beta 134; Precursor;)
genome : 11,851,437 - 11,853,821 (2,385)
query : 1 - 314 (314/314)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
InterPro :
IPR025933 : Beta-defensin
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058455)
HIX0058455
HIT000332016
(
AY621331
)
(Beta-defensin 134; Defensin, beta 134; Precursor;)
genome : 11,851,489 - 11,853,760 (2,272)
query : 1 - 201 (201/201)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
InterPro :
IPR025933 : Beta-defensin
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058455)
HIX0058455
HIT000340988
(
DQ012024
)
(Beta-defensin 134; Defensin, beta 134; Precursor;)
genome : 11,851,489 - 11,853,760 (2,272)
query : 1 - 201 (201/201)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
InterPro :
IPR025933 : Beta-defensin
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058455)
HIX0058455
HIT000366102 (
NM_001033019
)
(Beta-defensin 134; Defensin, beta 134; Precursor;)
genome : 11,851,489 - 11,853,760 (2,272)
query : 1 - 201 (201/201)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0058455)
HIX0209064
HIT000632357 (
ENST00000533272
)
(Conserved hypothetical protein.)
genome : 11,856,596 - 11,856,977 (382)
query : 1 - 382 (382/382)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 13, nucl 10.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209064)
HIX0208287
HIT000714314_02 (
ENST00000602581
)
(Beta-defensin family protein.)
genome : 11,860,909 - 11,861,591 (683)
query : 1 - 683 (683/683)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208287)
HIX0208287
HIT000629362_02 (
ENST00000530210
)
(Beta-defensin family protein.)
genome : 11,861,059 - 11,907,134 (46,076)
query : 1 - 213 (213/213)
2 exons
identity = 0.972
3'(0.968;0.983)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208287)
HIX0208287
HIT000722728_02 (
NM_001242853
)
(Beta-defensin family protein.)
genome : 11,861,059 - 11,907,134 (46,076)
query : 1 - 213 (213/213)
2 exons
identity = 0.972
3'(0.968;0.983)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208287)
HIX0208287
HIT000632373_01 (
ENST00000533289
)
(Beta-defensin family protein.)
genome : 11,861,062 - 11,907,134 (46,073)
query : 1 - 216 (216/216)
2 exons
identity = 0.963
3'(0.973;0.940)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208287)
HIX0208287
HIT000627988_02 (
ENST00000528817
)
(Beta-defensin family protein.)
genome : 11,861,062 - 11,861,226 (165)
query : 1 - 165 (165/165)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208287)
HIX0208287
HIT000631435_02 (
ENST00000532329
)
(Beta-defensin family protein.)
genome : 11,861,063 - 11,861,216 (154)
query : 1 - 154 (154/154)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, extr 14, cyto_nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208287)
HIX0025602
HIT000092850
(
BC032892
)
(Conserved hypothetical protein.)
genome : 11,866,297 - 12,458,974 (592,678)
query : 9 - 725 (717/741)
3 exons
identity = 0.952
3'(0.994;0.996)5'
coverage = 0.989
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 16.5, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025602)
HIX0025602
HIT000626597_03 (
ENST00000527396
)
(Hypothetical protein.)
genome : 11,870,545 - 11,873,043 (2,499)
query : 1 - 425 (425/425)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 18.5, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025602)
HIX0025602
HIT000016126
(
AK091259
)
(Conserved hypothetical protein.)
genome : 11,871,651 - 12,461,945 (590,295)
query : 1 - 3,601 (3,601/3,601)
2 exons
identity = 0.991
3'(0.994)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 10.3333, mito 9, extr 2, cyto 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025602)
HIX0209056
HIT000629959_02 (
ENST00000530817
)
(Hypothetical protein.)
genome : 11,882,753 - 11,883,107 (355)
query : 1 - 355 (355/355)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209056)
HIX0208284
HIT000643440_04 (
ENST00000544395
)
(Olfactory receptor family protein.)
genome : 11,891,126 - 11,892,152 (1,027)
query : 1 - 1,023 (1,023/1,023)
1 exon
identity = 0.953
3'(0.953)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208284)
HIX0208284
HIT000627887_01 (
ENST00000528715
)
(Olfactory receptor family protein.)
genome : 11,891,155 - 11,892,121 (967)
query : 1 - 967 (967/967)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208284)
HIX0168828
HIT000340986_03
(
DQ012022
)
Representative transcript
(Beta-defensin 130; Beta-defensin 30; DEFB-30; Defensin, beta 130; Precursor;)
genome : 11,921,898 - 11,929,256 (7,359)
query : 1 - 240 (240/240)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001855 : Beta defensin type
GO :
0005576 : Cellular Component : extracellular region
0006952 : Biological Process : defense response
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168828)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AY621368
Mus
sp. (Mouse) : BC132604
Canis
sp. (Dog) : DQ011999
HIX0168828
HIT000366354_03 (
NM_001037804
)
(Beta-defensin 130; Beta-defensin 30; DEFB-30; Defensin, beta 130; Precursor;)
genome : 11,921,898 - 11,929,256 (7,359)
query : 1 - 240 (240/240)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168828)
HIX0168828
HIT000483077_03 (
ENST00000400079
)
(Beta-defensin 130; Beta-defensin 30; DEFB-30; Defensin, beta 130; Precursor;)
genome : 11,921,898 - 11,929,256 (7,359)
query : 1 - 240 (240/240)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168828)
HIX0168828
HIT000535752_01 (
ENST00000437818
)
(Beta-defensin 130; Beta-defensin 30; DEFB-30; Defensin, beta 130; Precursor;)
genome : 11,921,898 - 11,929,256 (7,359)
query : 1 - 240 (240/240)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168828)
HIX0168828
HIT000627695_01 (
ENST00000528518
)
(Beta-defensin 130; Beta-defensin 30; DEFB-30; Defensin, beta 130; Precursor;)
genome : 11,921,898 - 11,929,256 (7,359)
query : 1 - 237 (237/237)
2 exons
identity = 0.988
3'(0.984;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168828)
HIX0168828
HIT000656021_02 (
NM_001195257
)
(Beta-defensin 130; Beta-defensin 30; DEFB-30; Defensin, beta 130; Precursor;)
genome : 11,921,898 - 11,929,256 (7,359)
query : 1 - 240 (240/240)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168828)
HIX0168828
HIT000524800_01 (
ENST00000426866
)
(Beta-defensin 130; Beta-defensin 30; DEFB-30; Defensin, beta 130; Precursor;)
genome : 11,921,898 - 11,929,253 (7,356)
query : 1 - 237 (237/237)
2 exons
identity = 0.987
3'(0.984;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168828)
HIX0168828
HIT000629153_01 (
ENST00000530001
)
(Beta-defensin 130; Beta-defensin 30; DEFB-30; Defensin, beta 130; Precursor;)
genome : 11,921,903 - 11,929,256 (7,354)
query : 1 - 230 (230/230)
2 exons
identity = 0.970
3'(0.966;0.983)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 3, cyto 1.5, cyto_plas 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168828)
HIX0017348
HIT000339714_03
(
BC110823
)
(Krueppel-associated box domain containing protein.)
genome : 11,946,847 - 11,973,024 (26,178)
query : 2 - 3,682 (3,681/3,696)
7 exons
identity = 0.997
5'(0.993;0.978;1.000;1.000;1.000;0.988;0.998)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017348)
Ortholog candidate ( ->
Evola
)
Monodelphis
sp. (Opossum) : ENSMODT00000029607
Macaca
sp. (Macaque) : XM_001113996
HIX0017348
HIT000366475 (
NM_001039615
)
(Krueppel-associated box domain containing protein.)
genome : 11,946,847 - 11,973,025 (26,179)
query : 1 - 3,683 (3,683/3,683)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017348)
HIX0208280
HIT000628321_02 (
ENST00000529157
)
(Beta-defensin family protein.)
genome : 11,952,537 - 11,955,527 (2,991)
query : 1 - 608 (608/608)
3 exons
identity = 0.961
3'(0.965;0.973;0.939)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 10, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208280)
HIX0208280
HIT000626981_02 (
ENST00000527787
)
(Beta-defensin family protein.)
genome : 11,952,688 - 11,952,856 (169)
query : 1 - 169 (169/169)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 3, nucl 2, mito 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208280)
HIX0017348
HIT000483082 (
ENST00000400085
)
(Krueppel-associated box domain containing protein.)
genome : 11,961,898 - 11,973,025 (11,128)
query : 1 - 3,377 (3,377/3,377)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017348)
HIX0017348
HIT000479900_03 (
ENST00000396570
)
(Krueppel-associated box domain containing protein.)
genome : 11,965,630 - 11,970,385 (4,756)
query : 58 - 751 (694/751)
5 exons
identity = 0.977
5'(0.953;0.984;0.990;0.988;0.974)3'
coverage = 0.924
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017348)
HIX0017348
HIT000312848_03 (
ENST00000359286
)
(Krueppel-associated box domain containing protein.)
genome : 11,965,614 - 11,973,129 (7,516)
query : 1 - 3,455 (3,455/3,455)
5 exons
identity = 0.979
5'(0.960;0.984;0.990;0.988;0.978)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017348)
HIX0017348
HIT000624443_02 (
ENST00000525199
)
(Krueppel-associated box domain containing protein.)
genome : 11,965,631 - 11,973,129 (7,499)
query : 1 - 3,442 (3,442/3,442)
5 exons
identity = 0.972
5'(1.000;0.984;0.979;0.964;0.971)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017348)
HIX0017348
HIT000481711_03 (
ENST00000398526
)
(Hypothetical protein.)
genome : 11,968,938 - 11,979,561 (10,624)
query : 1 - 339 (339/339)
3 exons
identity = 0.973
5'(0.988;0.968;0.970)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 7.5, cyto_nucl 6, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017348)
HIX0017348
HIT000624707_03 (
ENST00000525473
)
(Hypothetical protein.)
genome : 11,968,938 - 11,979,561 (10,624)
query : 1 - 339 (339/339)
3 exons
identity = 0.973
5'(0.965;0.968;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 8, nucl 4, cyto_pero 4, cyto_plas 4,
cyto_golg 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017348)
HIX0017348
HIT000489219
(
AK294595
)
(Conserved hypothetical protein.)
genome : 11,973,291 - 12,423,441 (450,151)
query : 1 - 1,001 (1,001/1,001)
6 exons
identity = 0.997
5'(0.996;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, extr 3, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017348)
HIX0017348
HIT000532012_01 (
ENST00000434078
)
(Hypothetical protein.)
genome : 11,973,291 - 12,008,698 (35,408)
query : 1 - 1,071 (1,071/1,071)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, extr 3, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017348)
HIX0017348
HIT000563487 (
NR_027425
)
(Conserved hypothetical protein.)
genome : 11,973,291 - 12,008,698 (35,408)
query : 1 - 1,071 (1,071/1,071)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, extr 3, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017348)
HIX0017348
HIT000629251_02 (
ENST00000530099
)
(Hypothetical protein.)
genome : 11,973,292 - 11,979,872 (6,581)
query : 1 - 920 (920/920)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017348)
HIX0017348
HIT000727543_01 (
NR_073388
)
(Protein FAM86C1 isoform 2.)
genome : 11,973,314 - 12,043,236 (69,923)
query : 1 - 1,007 (1,007/1,007)
4 exons
identity = 0.953
5'(0.950;1.000;0.965;0.942)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 12, cyto 7, mito 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017348)
HIX0218328
HIT000727542_02 (
NR_073387
)
(Hypothetical protein.)
genome : 11,973,314 - 11,977,172 (3,859)
query : 3 - 2,488 (2,486/2,488)
2 exons
identity = 0.955
3'(0.950;0.956)5'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 11, cyto 7, mito_nucl 7, extr 6.5, mito_pero 6.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218328)
HIX0017348
HIT000623966_02 (
ENST00000524714
)
(Protein FAM86A isoform 2.)
genome : 11,973,731 - 12,043,089 (69,359)
query : 1 - 447 (447/447)
4 exons
identity = 0.962
5'(0.990;1.000;0.965;0.927)3'
coverage = 1.000
SOSUI :
This sequence is too short.
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017348)
HIX0017348
HIT000026425
(
AL390183
)
(Conserved hypothetical protein.)
genome : 11,973,759 - 12,037,651 (63,893)
query : 1 - 3,411 (3,411/3,428)
7 exons
identity = 0.992
5'(1.000;0.960;0.959;0.912;0.952;1.000;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 6.5, cyto_nucl 6, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017348)
HIX0095413
HIT000398519 (
NR_003275
)
(Peptidase C19, ubiquitin carboxyl-terminal hydrolase domain containing protein.)
genome : 11,985,367 - 11,986,806 (1,440)
query : 1 - 1,440 (1,440/1,440)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 10, cyto 9.5, nucl 7.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0095413)
HIX0095413
HIT000625716 (
ENST00000526505
)
(Peptidase C19, ubiquitin carboxyl-terminal hydrolase domain containing protein.)
genome : 11,985,616 - 11,986,807 (1,192)
query : 1 - 1,192 (1,192/1,192)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 10, cyto 9.5, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0095413)
HIX0168980
HIT000514836 (
ENST00000416902
)
(Peptidase C19, ubiquitin carboxyl-terminal hydrolase domain containing protein.)
genome : 11,989,926 - 11,991,518 (1,593)
query : 1 - 1,593 (1,593/1,593)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 15.5, nucl 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168980)
HIX0168980
HIT000723915 (
NM_001256869
)
(Peptidase C19, ubiquitin carboxyl-terminal hydrolase domain containing protein.)
genome : 11,989,926 - 11,991,518 (1,593)
query : 1 - 1,593 (1,593/1,593)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 15.5, nucl 12
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168980)
HIX0168980
HIT000629596 (
ENST00000530447
)
(Peptidase C19, ubiquitin carboxyl-terminal hydrolase domain containing protein.)
genome : 11,989,928 - 11,991,953 (2,026)
query : 1 - 2,026 (2,026/2,026)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 15.5, nucl 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168980)
HIX0034323
HIT000723930_02 (
NM_001256894
)
(Ubiquitin carboxyl-terminal hydrolase 17-like protein 24; EC=3.4.19.12; Deubiquitinating enzyme 17; Ubiquitin thioesterase 17; Ubiquitin-specific-processing protease 17;)
genome : 11,994,334 - 11,996,269 (1,936)
query : 1 - 1,678 (1,678/1,680)
2 exons
identity = 0.964
3'(0.933;0.965)5'
coverage = 0.999
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, nucl 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034323)
HIX0034323
HIT000128560_01 (
ENST00000333796
)
(Ubiquitin carboxyl-terminal hydrolase 17; USP17; EC=3.4.19.12; Deubiquitinating enzyme 17-like protein 2; Deubiquitinating protein 3; DUB-3; Ubiquitin carboxyl-terminal hydrolase 17-like protein 2; Ubiquitin thioesterase 17-like protein 2; Ubiquitin-specific-processing protease 17-like protein 2;)
genome : 11,994,677 - 11,996,586 (1,910)
query : 1 - 1,910 (1,910/1,910)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034323)
HIX0034323
HIT000255059_03
(
AY509884
)
Representative transcript
(Ubiquitin carboxyl-terminal hydrolase 17.)
genome : 11,994,677 - 11,996,269 (1,593)
query : 1 - 1,593 (1,593/1,593)
1 exon
identity = 0.984
3'(0.984)5'
coverage = 1.000
EC number :
EC 3.4.19.12
InterPro :
IPR001394 : Peptidase C19, ubiquitin carboxyl-terminal hydrolase
IPR006861 : Hyaluronan/mRNA-binding protein
IPR018200 : Ubiquitin specific protease, conserved site
IPR028889 : Ubiquitin specific protease domain
GO :
0006511 : Biological Process : ubiquitin-dependent protein catabolic process
0036459 : Molecular Function : ubiquitinyl hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 15.5, nucl 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034323)
Ortholog candidate ( ->
Evola
)
Canis
sp. (Dog) : ENSCAFT00000039055
Equus
sp. (Horse) : XM_001494422
HIX0034323
HIT000319821_03 (
NM_201402
)
(Ubiquitin carboxyl-terminal hydrolase 17; USP17; EC=3.4.19.12; Deubiquitinating enzyme 17-like protein 2; Deubiquitinating protein 3; DUB-3; Ubiquitin carboxyl-terminal hydrolase 17-like protein 2; Ubiquitin thioesterase 17-like protein 2; Ubiquitin-specific-processing protease 17-like protein 2;)
genome : 11,994,677 - 11,996,269 (1,593)
query : 1 - 1,593 (1,593/1,593)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 11
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034323)
HIX0034323
HIT000519222_09 (
ENST00000421288
)
(Ubiquitin carboxyl-terminal hydrolase 17-like protein 24; EC=3.4.19.12; Deubiquitinating enzyme 17; Ubiquitin thioesterase 17; Ubiquitin-specific-processing protease 17;)
genome : 11,994,677 - 11,996,269 (1,593)
query : 1 - 1,593 (1,593/1,593)
1 exon
identity = 0.968
3'(0.968)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 15.5, nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034323)
HIX0034323
HIT000604348_08 (
ENST00000504104
)
(Ubiquitin carboxyl-terminal hydrolase 17-like protein 24; EC=3.4.19.12; Deubiquitinating enzyme 17; Ubiquitin thioesterase 17; Ubiquitin-specific-processing protease 17;)
genome : 11,994,677 - 11,996,269 (1,593)
query : 1 - 1,593 (1,593/1,593)
1 exon
identity = 0.969
3'(0.969)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 15.5, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034323)
HIX0034323
HIT000604447_02 (
ENST00000504209
)
(Ubiquitin carboxyl-terminal hydrolase 17-like protein 24; EC=3.4.19.12; Deubiquitinating enzyme 17; Ubiquitin thioesterase 17; Ubiquitin-specific-processing protease 17;)
genome : 11,994,677 - 11,996,269 (1,593)
query : 1 - 1,593 (1,593/1,593)
1 exon
identity = 0.967
3'(0.967)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 15.5, nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034323)
HIX0034323
HIT000604694_08 (
ENST00000504481
)
(Ubiquitin carboxyl-terminal hydrolase 17-like protein 24; EC=3.4.19.12; Deubiquitinating enzyme 17; Ubiquitin thioesterase 17; Ubiquitin-specific-processing protease 17;)
genome : 11,994,677 - 11,996,269 (1,593)
query : 1 - 1,593 (1,593/1,593)
1 exon
identity = 0.969
3'(0.969)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 15.5, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034323)
HIX0034323
HIT000604748_08 (
ENST00000504543
)
(Ubiquitin carboxyl-terminal hydrolase 17-like protein 24; EC=3.4.19.12; Deubiquitinating enzyme 17; Ubiquitin thioesterase 17; Ubiquitin-specific-processing protease 17;)
genome : 11,994,677 - 11,996,269 (1,593)
query : 1 - 1,593 (1,593/1,593)
1 exon
identity = 0.969
3'(0.969)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 15.5, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034323)
HIX0034323
HIT000605010_02 (
ENST00000504838
)
(Ubiquitin carboxyl-terminal hydrolase 17-like protein 13.)
genome : 11,994,677 - 11,996,269 (1,593)
query : 1 - 1,593 (1,593/1,593)
1 exon
identity = 0.964
3'(0.964)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 16.5, nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034323)
HIX0034323
HIT000606231_02 (
ENST00000506151
)
(Ubiquitin carboxyl-terminal hydrolase 17-like protein 24; EC=3.4.19.12; Deubiquitinating enzyme 17; Ubiquitin thioesterase 17; Ubiquitin-specific-processing protease 17;)
genome : 11,994,677 - 11,996,269 (1,593)
query : 1 - 1,593 (1,593/1,593)
1 exon
identity = 0.969
3'(0.969)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 15.5, nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034323)
HIX0034323
HIT000606478_02 (
ENST00000506414
)
(Ubiquitin carboxyl-terminal hydrolase 17-like protein 24; EC=3.4.19.12; Deubiquitinating enzyme 17; Ubiquitin thioesterase 17; Ubiquitin-specific-processing protease 17;)
genome : 11,994,677 - 11,996,269 (1,593)
query : 1 - 1,593 (1,593/1,593)
1 exon
identity = 0.965
3'(0.965)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034323)
HIX0034323
HIT000607163_02 (
ENST00000507155
)
(Ubiquitin carboxyl-terminal hydrolase 17-like protein 24; EC=3.4.19.12; Deubiquitinating enzyme 17; Ubiquitin thioesterase 17; Ubiquitin-specific-processing protease 17;)
genome : 11,994,677 - 11,996,269 (1,593)
query : 1 - 1,593 (1,593/1,593)
1 exon
identity = 0.968
3'(0.968)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 12, nucl 8.5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034323)
HIX0034323
HIT000607230_02 (
ENST00000507227
)
(Ubiquitin carboxyl-terminal hydrolase 17-like protein 5; EC=3.4.19.12; Deubiquitinating enzyme 17-like protein 5; Ubiquitin thioesterase 17-like protein 5; Ubiquitin-specific-processing protease 17-like protein 5;)
genome : 11,994,677 - 11,996,269 (1,593)
query : 1 - 1,593 (1,593/1,593)
1 exon
identity = 0.968
3'(0.968)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 15.5, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034323)
HIX0034323
HIT000609145_08 (
ENST00000509271
)
(Ubiquitin carboxyl-terminal hydrolase 17-like protein 24; EC=3.4.19.12; Deubiquitinating enzyme 17; Ubiquitin thioesterase 17; Ubiquitin-specific-processing protease 17;)
genome : 11,994,677 - 11,996,269 (1,593)
query : 1 - 1,593 (1,593/1,593)
1 exon
identity = 0.969
3'(0.969)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 15.5, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034323)
HIX0034323
HIT000609515_08 (
ENST00000509660
)
(Ubiquitin carboxyl-terminal hydrolase 17-like protein 24; EC=3.4.19.12; Deubiquitinating enzyme 17; Ubiquitin thioesterase 17; Ubiquitin-specific-processing protease 17;)
genome : 11,994,677 - 11,996,269 (1,593)
query : 1 - 1,593 (1,593/1,593)
1 exon
identity = 0.969
3'(0.969)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 15.5, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034323)
HIX0034323
HIT000611006_02 (
ENST00000511280
)
(Ubiquitin carboxyl-terminal hydrolase 17-like protein 6; EC=3.4.19.12; Deubiquitinating enzyme 17-like protein 6; Ubiquitin thioesterase 17-like protein 6; Ubiquitin-specific-processing protease 17-like protein 6;)
genome : 11,994,677 - 11,996,269 (1,593)
query : 1 - 1,593 (1,593/1,593)
1 exon
identity = 0.969
3'(0.969)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 15.5, nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034323)
HIX0034323
HIT000611279_02 (
ENST00000511568
)
(Ubiquitin carboxyl-terminal hydrolase 17-like protein 24; EC=3.4.19.12; Deubiquitinating enzyme 17; Ubiquitin thioesterase 17; Ubiquitin-specific-processing protease 17;)
genome : 11,994,677 - 11,996,269 (1,593)
query : 1 - 1,593 (1,593/1,593)
1 exon
identity = 0.969
3'(0.969)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 15.5, nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034323)
HIX0034323
HIT000611384_08 (
ENST00000511681
)
(Ubiquitin carboxyl-terminal hydrolase 17-like protein 24; EC=3.4.19.12; Deubiquitinating enzyme 17; Ubiquitin thioesterase 17; Ubiquitin-specific-processing protease 17;)
genome : 11,994,677 - 11,996,269 (1,593)
query : 1 - 1,593 (1,593/1,593)
1 exon
identity = 0.969
3'(0.969)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 15.5, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034323)
HIX0034323
HIT000614987_02 (
ENST00000515566
)
(Ubiquitin carboxyl-terminal hydrolase 17-like protein 24; EC=3.4.19.12; Deubiquitinating enzyme 17; Ubiquitin thioesterase 17; Ubiquitin-specific-processing protease 17;)
genome : 11,994,677 - 11,996,269 (1,593)
query : 1 - 1,593 (1,593/1,593)
1 exon
identity = 0.966
3'(0.966)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 10, cyto_pero 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034323)
HIX0034323
HIT000614995_08 (
ENST00000515574
)
(Ubiquitin carboxyl-terminal hydrolase 17-like protein 24; EC=3.4.19.12; Deubiquitinating enzyme 17; Ubiquitin thioesterase 17; Ubiquitin-specific-processing protease 17;)
genome : 11,994,677 - 11,996,269 (1,593)
query : 1 - 1,593 (1,593/1,593)
1 exon
identity = 0.969
3'(0.969)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 15.5, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034323)
HIX0034323
HIT000657505_08 (
NM_001242326
)
(Ubiquitin carboxyl-terminal hydrolase 17-like protein 24; EC=3.4.19.12; Deubiquitinating enzyme 17; Ubiquitin thioesterase 17; Ubiquitin-specific-processing protease 17;)
genome : 11,994,677 - 11,996,269 (1,593)
query : 1 - 1,593 (1,593/1,593)
1 exon
identity = 0.969
3'(0.969)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 15.5, nucl 8.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034323)
HIX0034323
HIT000657506_08 (
NM_001242328
)
(Ubiquitin carboxyl-terminal hydrolase 17-like protein 24; EC=3.4.19.12; Deubiquitinating enzyme 17; Ubiquitin thioesterase 17; Ubiquitin-specific-processing protease 17;)
genome : 11,994,677 - 11,996,269 (1,593)
query : 1 - 1,593 (1,593/1,593)
1 exon
identity = 0.969
3'(0.969)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 15.5, nucl 8.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034323)
HIX0034323
HIT000657507_02 (
NM_001242329
)
(Ubiquitin carboxyl-terminal hydrolase 17-like protein 5; EC=3.4.19.12; Deubiquitinating enzyme 17-like protein 5; Ubiquitin thioesterase 17-like protein 5; Ubiquitin-specific-processing protease 17-like protein 5;)
genome : 11,994,677 - 11,996,269 (1,593)
query : 1 - 1,593 (1,593/1,593)
1 exon
identity = 0.968
3'(0.968)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 15.5, nucl 8.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034323)
HIX0034323
HIT000657508_08 (
NM_001242330
)
(Ubiquitin carboxyl-terminal hydrolase 17-like protein 24; EC=3.4.19.12; Deubiquitinating enzyme 17; Ubiquitin thioesterase 17; Ubiquitin-specific-processing protease 17;)
genome : 11,994,677 - 11,996,269 (1,593)
query : 1 - 1,593 (1,593/1,593)
1 exon
identity = 0.969
3'(0.969)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 15.5, nucl 8.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034323)
HIX0034323
HIT000657509_08 (
NM_001242331
)
(Ubiquitin carboxyl-terminal hydrolase 17-like protein 24; EC=3.4.19.12; Deubiquitinating enzyme 17; Ubiquitin thioesterase 17; Ubiquitin-specific-processing protease 17;)
genome : 11,994,677 - 11,996,269 (1,593)
query : 1 - 1,593 (1,593/1,593)
1 exon
identity = 0.969
3'(0.969)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 15.5, nucl 8.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034323)
HIX0034323
HIT000657510_08 (
NM_001242332
)
(Ubiquitin carboxyl-terminal hydrolase 17-like protein 24; EC=3.4.19.12; Deubiquitinating enzyme 17; Ubiquitin thioesterase 17; Ubiquitin-specific-processing protease 17;)
genome : 11,994,677 - 11,996,269 (1,593)
query : 1 - 1,593 (1,593/1,593)
1 exon
identity = 0.969
3'(0.969)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 15.5, nucl 8.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034323)
HIX0034323
HIT000722619_08 (
NM_001242327
)
(Ubiquitin carboxyl-terminal hydrolase 17-like protein 24; EC=3.4.19.12; Deubiquitinating enzyme 17; Ubiquitin thioesterase 17; Ubiquitin-specific-processing protease 17;)
genome : 11,994,677 - 11,996,269 (1,593)
query : 1 - 1,593 (1,593/1,593)
1 exon
identity = 0.969
3'(0.969)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 15.5, nucl 8.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034323)
HIX0034323
HIT000723900_02 (
NM_001256852
)
(Ubiquitin carboxyl-terminal hydrolase 17-like protein 10.)
genome : 11,994,677 - 11,996,269 (1,593)
query : 1 - 1,593 (1,593/1,593)
1 exon
identity = 0.965
3'(0.965)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, nucl 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034323)
HIX0034323
HIT000723901_02 (
NM_001256853
)
(Ubiquitin carboxyl-terminal hydrolase 17-like protein 24; EC=3.4.19.12; Deubiquitinating enzyme 17; Ubiquitin thioesterase 17; Ubiquitin-specific-processing protease 17;)
genome : 11,994,677 - 11,996,269 (1,593)
query : 1 - 1,593 (1,593/1,593)
1 exon
identity = 0.965
3'(0.965)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034323)
HIX0034323
HIT000723902_02 (
NM_001256854
)
(Ubiquitin carboxyl-terminal hydrolase 17-like protein 24; EC=3.4.19.12; Deubiquitinating enzyme 17; Ubiquitin thioesterase 17; Ubiquitin-specific-processing protease 17;)
genome : 11,994,677 - 11,996,269 (1,593)
query : 1 - 1,593 (1,593/1,593)
1 exon
identity = 0.969
3'(0.969)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 15.5, nucl 9.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034323)
HIX0034323
HIT000723903_02 (
NM_001256855
)
(Ubiquitin carboxyl-terminal hydrolase 17-like protein 24; EC=3.4.19.12; Deubiquitinating enzyme 17; Ubiquitin thioesterase 17; Ubiquitin-specific-processing protease 17;)
genome : 11,994,677 - 11,996,269 (1,593)
query : 1 - 1,593 (1,593/1,593)
1 exon
identity = 0.965
3'(0.965)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 16, nucl 9.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034323)
HIX0034323
HIT000723905_02 (
NM_001256857
)
(Ubiquitin carboxyl-terminal hydrolase 17-like protein 24; EC=3.4.19.12; Deubiquitinating enzyme 17; Ubiquitin thioesterase 17; Ubiquitin-specific-processing protease 17;)
genome : 11,994,677 - 11,996,269 (1,593)
query : 1 - 1,593 (1,593/1,593)
1 exon
identity = 0.969
3'(0.969)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 15.5, nucl 9.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034323)
HIX0034323
HIT000723907_02 (
NM_001256859
)
(Ubiquitin carboxyl-terminal hydrolase 17-like protein 24; EC=3.4.19.12; Deubiquitinating enzyme 17; Ubiquitin thioesterase 17; Ubiquitin-specific-processing protease 17;)
genome : 11,994,677 - 11,996,269 (1,593)
query : 1 - 1,593 (1,593/1,593)
1 exon
identity = 0.967
3'(0.967)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 15.5, nucl 9.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034323)
HIX0034323
HIT000723908_02 (
NM_001256860
)
(Ubiquitin carboxyl-terminal hydrolase 17-like protein 24; EC=3.4.19.12; Deubiquitinating enzyme 17; Ubiquitin thioesterase 17; Ubiquitin-specific-processing protease 17;)
genome : 11,994,677 - 11,996,269 (1,593)
query : 1 - 1,593 (1,593/1,593)
1 exon
identity = 0.966
3'(0.966)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 10, cyto_pero 10
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034323)
HIX0034323
HIT000723909_02 (
NM_001256861
)
(Ubiquitin carboxyl-terminal hydrolase 17-like protein 24; EC=3.4.19.12; Deubiquitinating enzyme 17; Ubiquitin thioesterase 17; Ubiquitin-specific-processing protease 17;)
genome : 11,994,677 - 11,996,269 (1,593)
query : 1 - 1,593 (1,593/1,593)
1 exon
identity = 0.969
3'(0.969)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 15.5, nucl 9.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034323)
HIX0034323
HIT000723910_02 (
NM_001256862
)
(Ubiquitin carboxyl-terminal hydrolase 17-like protein 24; EC=3.4.19.12; Deubiquitinating enzyme 17; Ubiquitin thioesterase 17; Ubiquitin-specific-processing protease 17;)
genome : 11,994,677 - 11,996,269 (1,593)
query : 1 - 1,593 (1,593/1,593)
1 exon
identity = 0.965
3'(0.965)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034323)
HIX0034323
HIT000723911_02 (
NM_001256863
)
(Ubiquitin carboxyl-terminal hydrolase 17-like protein 6; EC=3.4.19.12; Deubiquitinating enzyme 17-like protein 6; Ubiquitin thioesterase 17-like protein 6; Ubiquitin-specific-processing protease 17-like protein 6;)
genome : 11,994,677 - 11,996,269 (1,593)
query : 1 - 1,593 (1,593/1,593)
1 exon
identity = 0.969
3'(0.969)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 15.5, nucl 9.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034323)
HIX0034323
HIT000723914_08 (
NM_001256867
)
(Ubiquitin carboxyl-terminal hydrolase 17-like protein 24; EC=3.4.19.12; Deubiquitinating enzyme 17; Ubiquitin thioesterase 17; Ubiquitin-specific-processing protease 17;)
genome : 11,994,677 - 11,996,269 (1,593)
query : 1 - 1,593 (1,593/1,593)
1 exon
identity = 0.969
3'(0.969)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 15.5, nucl 8.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034323)
HIX0034323
HIT000726702_02 (
NR_046416
)
(Ubiquitin carboxyl-terminal hydrolase 17-like protein 24; EC=3.4.19.12; Deubiquitinating enzyme 17; Ubiquitin thioesterase 17; Ubiquitin-specific-processing protease 17;)
genome : 11,994,678 - 11,996,270 (1,593)
query : 1 - 1,593 (1,593/1,593)
1 exon
identity = 0.969
3'(0.969)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 11, extr 8, nucl 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034323)
HIX0034323
HIT000606678_02 (
ENST00000506619
)
(Ubiquitin carboxyl-terminal hydrolase 17-like protein 18.)
genome : 11,995,719 - 11,996,269 (551)
query : 1 - 551 (551/551)
1 exon
identity = 0.969
3'(0.969)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 10, cyto_nucl 8, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034323)
HIX0017348
HIT000639611_03 (
ENST00000540566
)
(Hypothetical short protein.)
genome : 12,003,158 - 12,246,700 (243,543)
query : 1 - 496 (496/496)
3 exons
identity = 0.978
5'(0.962;0.985)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 15, cyto 10, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017348)
HIX0209040
HIT000628654_02 (
ENST00000529497
)
(Beta-defensin family protein.)
genome : 12,008,404 - 12,008,643 (240)
query : 1 - 240 (240/240)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 21, cyto 8.5, cyto_nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209040)
HIX0034426
HIT000429636
(
AK310770
)
(Hypothetical protein.)
genome : 12,027,194 - 12,028,231 (1,038)
query : 1 - 1,038 (1,038/1,038)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 9.5, cyto 9, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034426)
HIX0034426
HIT000070849
(
AF131844
)
Representative transcript
(Conserved hypothetical protein.)
genome : 12,028,017 - 12,029,563 (1,547)
query : 1 - 1,547 (1,547/1,569)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, extr 7, nucl 3.5, cyto_nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034426)
HIX0218101
HIT000117657_03 (
ENST00000307435
)
(Zinc finger, CCHC-type domain containing protein.)
genome : 12,029,708 - 12,036,088 (6,381)
query : 1 - 2,342 (2,342/2,342)
6 exons
identity = 0.956
3'(0.958;0.936;0.950;0.978;0.947;0.951)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218101)
HIX0218101
HIT000637648_02 (
ENST00000538603
)
(Zinc finger, CCHC-type domain containing protein.)
genome : 12,029,711 - 12,036,105 (6,395)
query : 1 - 2,513 (2,513/2,513)
7 exons
identity = 0.957
3'(0.958;0.936;0.950;0.978;0.968;0.947;0.957)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218101)
HIX0218101
HIT000610877_02 (
ENST00000511144
)
(Hypothetical protein.)
genome : 12,029,711 - 12,036,084 (6,374)
query : 1 - 2,423 (2,423/2,423)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 9.5, mito 9, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218101)
HIX0218101
HIT000726645_02 (
NR_046354
)
(Hypothetical protein.)
genome : 12,030,963 - 12,034,776 (3,814)
query : 1 - 790 (790/790)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218101)
HIX0017348
HIT000611363_02 (
ENST00000511660
)
(Chitobiosyldiphosphodolichol beta-mannosyltransferase; EC=2.4.1.142; Asparagine-linked glycosylation protein 1 homolog; Beta-1,4-mannosyltransferase; GDP-Man:GlcNAc2-PP-dolichol mannosyltransferase; GDP-mannose-dolichol diphosphochitobiose mannosyltransferase; Mannosyltransferase-1; MT-1; hMat-1;)
genome : 12,036,206 - 12,040,228 (4,023)
query : 1 - 450 (450/450)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 7, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017348)
HIX0007289
HIT000098958
(
BC048297
)
(Protein FAM86A;)
genome : 12,039,613 - 12,051,582 (11,970)
query : 1 - 1,945 (1,945/2,030)
6 exons
identity = 0.990
3'(0.996;0.975;1.000;0.993;0.984;1.000)5'
coverage = 1.000
InterPro :
IPR029063 : S-adenosyl-L-methionine-dependent methyltransferase
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, extr 10, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007289)
HIX0007289
HIT000334135
(
BC065013
)
(Protein FAM86B2.)
genome : 12,039,606 - 12,049,353 (9,748)
query : 6 - 2,210 (2,205/2,274)
8 exons
identity = 0.989
3'(0.995;0.976;0.993;0.993;0.990;0.991;1.000;
0.985)5'
coverage = 0.998
InterPro :
IPR029063 : S-adenosyl-L-methionine-dependent methyltransferase
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto_nucl 6.5, cyto 4.5, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007289)
HIX0007289
HIT000334180
(
BC072459
)
(Protein FAM86C1 isoform 2.)
genome : 12,039,621 - 12,051,574 (11,954)
query : 1 - 2,273 (2,273/2,320)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 6, cyto 4, mito_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007289)
HIX0007289
HIT000260525
(
BC062615
)
(Protein FAM86B2.)
genome : 12,039,621 - 12,051,573 (11,953)
query : 1 - 2,104 (2,104/2,144)
7 exons
identity = 0.988
3'(0.995;0.975;0.993;0.985;0.988;0.952;1.000)5'
coverage = 1.000
InterPro :
IPR029426 : FAM86
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 10.5, cyto_nucl 9, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007289)
HIX0007289
HIT000398247 (
NM_001083537
)
(FAM86 family protein.)
genome : 12,039,613 - 12,051,624 (12,012)
query : 1 - 2,438 (2,438/2,458)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 12.5, nucl 7.5, cysk 4, extr 2,
mito 2, cysk_plas 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007289)
HIX0007289
HIT000398606 (
NR_003494
)
(FAM86 family protein.)
genome : 12,039,613 - 12,051,624 (12,012)
query : 1 - 2,172 (2,172/2,192)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, cyto 15.5, nucl 12.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007289)
HIX0007289
HIT000266103
(
BC085016
)
Representative transcript
(Protein FAM86B1.)
genome : 12,039,615 - 12,051,623 (12,009)
query : 1 - 2,139 (2,139/2,157)
8 exons
identity = 0.990
3'(0.996;0.975;1.000;0.985;0.988;0.984;0.986;
1.000)5'
coverage = 1.000
InterPro :
IPR029063 : S-adenosyl-L-methionine-dependent methyltransferase
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007289)
HIX0007289
HIT000335981
(
BC098427
)
(Protein FAM86B1.)
genome : 12,039,621 - 12,051,576 (11,956)
query : 1 - 2,110 (2,110/2,127)
7 exons
identity = 0.993
3'(0.996;0.981;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR029063 : S-adenosyl-L-methionine-dependent methyltransferase
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 11.1667, mito 7, cyto 5.5,
extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007289)
HIX0007289
HIT000033569
(
BC007983
)
(FAM86 family protein.)
genome : 12,039,621 - 12,051,191 (11,571)
query : 1 - 2,341 (2,341/2,358)
8 exons
identity = 0.990
3'(0.995;0.976;1.000;0.993;0.993;1.000;1.000;
0.990)5'
coverage = 1.000
InterPro :
IPR019410 : Nicotinamide N-methyltransferase-like
IPR029063 : S-adenosyl-L-methionine-dependent methyltransferase
IPR029426 : FAM86
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 16, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007289)
HIX0007289
HIT000628311 (
ENST00000529146
)
(S-adenosyl-L-methionine-dependent methyltransferase domain containing protein.)
genome : 12,039,605 - 12,049,353 (9,749)
query : 1 - 2,258 (2,258/2,258)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10.5, cyto_mito 10.1667, cyto_nucl 8.5, cyto 8,
extr 7, cyto_pero 5.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007289)
HIX0007289
HIT000022975
(
AK098138
)
(Protein FAM86B1.)
genome : 12,039,607 - 12,051,591 (11,985)
query : 1 - 2,041 (2,041/2,041)
7 exons
identity = 0.990
3'(0.995;0.975;0.993;0.993;1.000;0.984;1.000)5'
coverage = 1.000
InterPro :
IPR029063 : S-adenosyl-L-methionine-dependent methyltransferase
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 10.6667, mito 9, cyto 6.5,
cyto_pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007289)
HIX0007289
HIT000133167 (
ENST00000340537
)
(FAM86 family protein.)
genome : 12,039,607 - 12,051,591 (11,985)
query : 1 - 2,145 (2,145/2,145)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, cyto 15.5, nucl 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007289)
HIX0007289
HIT000312818_02 (
ENST00000359244
)
(FAM86 family protein.)
genome : 12,039,616 - 12,293,873 (254,258)
query : 3 - 2,110 (2,108/2,110)
7 exons
identity = 0.951
3'(0.980;0.956)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 9.5, cyto 8.5, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007289)
HIX0007289
HIT000307286_02 (
ENST00000346333
)
(FAM86 family protein.)
genome : 12,039,618 - 12,293,880 (254,263)
query : 1 - 2,010 (2,010/2,010)
6 exons
identity = 0.951
3'(0.980;0.956)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 8, cyto_nucl 7, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007289)
HIX0007289
HIT000633249 (
ENST00000534187
)
(S-adenosyl-L-methionine-dependent methyltransferase domain containing protein.)
genome : 12,039,619 - 12,051,614 (11,996)
query : 1 - 2,254 (2,254/2,254)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 11.1667, mito 7, cyto 5.5,
extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007289)
HIX0007289
HIT000529161 (
ENST00000431227
)
(FAM86 family protein.)
genome : 12,039,619 - 12,051,191 (11,573)
query : 1 - 2,394 (2,394/2,394)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 16, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007289)
HIX0007289
HIT000546162 (
ENST00000448228
)
(FAM86 family protein.)
genome : 12,039,960 - 12,051,629 (11,670)
query : 1 - 2,096 (2,096/2,096)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 12.5, nucl 7.5, cysk 4, extr 2,
mito 2, cysk_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007289)
HIX0007289
HIT000632925 (
ENST00000533852
)
(FAM86 family protein.)
genome : 12,040,065 - 12,051,579 (11,515)
query : 1 - 2,043 (2,043/2,043)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 12, nucl 8, mito 4, cysk 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007289)
HIX0007289
HIT000334783_03
(
BC093808
)
(Hypothetical protein.)
genome : 12,040,299 - 12,040,599 (301)
query : 1 - 301 (301/301)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 15.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007289)
HIX0007289
HIT000334785_03
(
BC093810
)
(Hypothetical protein.)
genome : 12,040,299 - 12,040,599 (301)
query : 1 - 301 (301/301)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 15.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007289)
HIX0007289
HIT000492365_01
(
AK297741
)
(Protein FAM86B1.)
genome : 12,040,627 - 12,051,603 (10,977)
query : 1 - 1,056 (1,056/1,056)
5 exons
identity = 0.997
3'(1.000;0.993;0.993;1.000;0.992)5'
coverage = 1.000
InterPro :
IPR029063 : S-adenosyl-L-methionine-dependent methyltransferase
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, extr 10, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007289)
HIX0007289
HIT000122841 (
ENST00000321602
)
(Conserved hypothetical protein.)
genome : 12,040,630 - 12,051,642 (11,013)
query : 1 - 1,171 (1,171/1,171)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 6, cyto 4, mito_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007289)
HIX0007289
HIT000493564_01
(
AK298940
)
(Protein FAM86B1.)
genome : 12,040,630 - 12,051,642 (11,013)
query : 1 - 1,171 (1,171/1,171)
4 exons
identity = 0.998
3'(0.998;0.997;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR029063 : S-adenosyl-L-methionine-dependent methyltransferase
IPR029426 : FAM86
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, cyto 14.5, nucl 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007289)
HIX0007289
HIT000629535 (
ENST00000530385
)
(Conserved hypothetical protein.)
genome : 12,040,630 - 12,051,642 (11,013)
query : 1 - 1,171 (1,171/1,171)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 6, cyto 4, mito_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007289)
HIX0007289
HIT000427305
(
AK308439
)
(S-adenosyl-L-methionine-dependent methyltransferase domain containing protein.)
genome : 12,040,700 - 12,051,603 (10,904)
query : 1 - 1,166 (1,166/1,191)
7 exons
identity = 0.992
3'(0.992;1.000;0.985;0.990;0.988;0.984;1.000)5'
coverage = 0.979
InterPro :
IPR029063 : S-adenosyl-L-methionine-dependent methyltransferase
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007289)
HIX0007289
HIT000626503 (
ENST00000527300
)
(FAM86 family protein.)
genome : 12,040,902 - 12,051,579 (10,678)
query : 1 - 765 (765/765)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 10, nucl 9.5, cyto 7.5,
extr_plas 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007289)
HIX0007289
HIT000629654_02 (
ENST00000530508
)
(Hypothetical protein.)
genome : 12,040,950 - 12,043,895 (2,946)
query : 1 - 1,419 (1,419/1,419)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, mito 9, cyto_pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007289)
HIX0007289
HIT000633778 (
ENST00000534732
)
(FAM86 family protein.)
genome : 12,040,962 - 12,051,559 (10,598)
query : 1 - 685 (685/685)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 8.5, cyto 7.5, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007289)
HIX0007289
HIT000428850_03
(
AK309984
)
(FAM86 family protein.)
genome : 12,040,987 - 12,051,534 (10,548)
query : 1 - 908 (908/908)
7 exons
identity = 0.994
3'(0.991;1.000;0.993;0.990;0.988;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR029426 : FAM86
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto_nucl 5.5, nucl 4.5, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007289)
HIX0007289
HIT000427379
(
AK308513
)
(Conserved hypothetical protein.)
genome : 12,040,989 - 12,051,591 (10,603)
query : 1 - 922 (922/922)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 6, cyto 4, mito_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007289)
HIX0007289
HIT000624142 (
ENST00000524893
)
(Conserved hypothetical protein.)
genome : 12,040,989 - 12,051,591 (10,603)
query : 1 - 922 (922/922)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 6, cyto 4, mito_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007289)
HIX0007289
HIT000698977_01 (
ENST00000587133
)
(FAM86 family protein.)
genome : 12,041,055 - 12,051,582 (10,528)
query : 1 - 873 (873/873)
6 exons
identity = 0.951
3'(0.919;0.973;0.962;0.933;0.968;0.949)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 16, nucl 10.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007289)
HIX0007289
HIT000581402_02 (
ENST00000477247
)
(FAM86 family protein.)
genome : 12,041,115 - 12,051,579 (10,465)
query : 1 - 995 (995/995)
8 exons
identity = 0.951
3'(0.980;0.953;0.966;0.948;0.882;0.928;0.984;
0.948)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 12.5, nucl 9, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007289)
HIX0007289
HIT000633576 (
ENST00000534520
)
(FAM86 family protein.)
genome : 12,042,658 - 12,051,636 (8,979)
query : 1 - 808 (808/808)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, cyto 15.5, nucl 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007289)
HIX0007289
HIT000625045_02 (
ENST00000525822
)
(S-adenosyl-L-methionine-dependent methyltransferase domain containing protein.)
genome : 12,042,743 - 12,049,322 (6,580)
query : 1 - 430 (430/430)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 2, cyto 2, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007289)
HIX0007289
HIT000625916_01 (
ENST00000526708
)
(Nicotinamide N-methyltransferase-like family protein.)
genome : 12,042,885 - 12,051,607 (8,723)
query : 1 - 994 (994/994)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, cyto_nucl 11, cyto_pero 9.66667, mito 7,
nucl 5.5, pero 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007289)
HIX0007289
HIT000628226_02 (
ENST00000529060
)
(FAM86 family protein.)
genome : 12,042,885 - 12,051,574 (8,690)
query : 1 - 778 (778/778)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 5.5, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007289)
HIX0007289
HIT000423798_03
(
AK291001
)
(Hypothetical protein.)
genome : 12,042,915 - 12,051,636 (8,722)
query : 1 - 551 (551/551)
5 exons
identity = 0.996
3'(1.000;0.993;1.000;0.984;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 11.1667, mito 8, cyto 5.5,
cyto_pero 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007289)
HIX0007289
HIT000525827_04 (
ENST00000427893
)
(FAM86 family protein.)
genome : 12,042,951 - 12,051,583 (8,633)
query : 1 - 829 (829/829)
7 exons
identity = 0.954
3'(0.976;0.977;0.918;0.931;0.952;0.984;0.930)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 9, nucl 3, mito 3, mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007289)
HIX0007289
HIT000631582_02 (
ENST00000532480
)
(FAM86 family protein.)
genome : 12,042,962 - 12,051,579 (8,618)
query : 1 - 447 (447/447)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18.5, cyto 16.5, nucl 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007289)
HIX0007289
HIT000628772_01 (
ENST00000529617
)
(FAM86 family protein.)
genome : 12,042,964 - 12,051,617 (8,654)
query : 1 - 933 (933/933)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15.5, nucl 9, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007289)
HIX0007289
HIT000630948_02 (
ENST00000531833
)
(FAM86 family protein.)
genome : 12,043,005 - 12,051,598 (8,594)
query : 1 - 558 (558/558)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, cyto 13.5, nucl 10.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007289)
HIX0007289
HIT000623824_02 (
ENST00000524571
)
(FAM86 family protein.)
genome : 12,043,571 - 12,051,576 (8,006)
query : 1 - 928 (928/928)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 12.5, cyto 12.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007289)
HIX0007289
HIT000632591 (
ENST00000533513
)
(FAM86 family protein.)
genome : 12,043,963 - 12,051,582 (7,620)
query : 1 - 725 (725/725)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15.5, nucl 9, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007289)
HIX0218206
HIT000116833_02 (
ENST00000304751
)
(Hypothetical short protein.)
genome : 12,044,023 - 12,047,594 (3,572)
query : 1 - 795 (795/795)
2 exons
identity = 0.962
5'(0.961;0.967)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, nucl 5, cyto_nucl 5, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218206)
HIX0218276
HIT000627691_02 (
ENST00000528514
)
(Hypothetical short protein.)
genome : 12,051,976 - 12,053,789 (1,814)
query : 1 - 1,361 (1,361/1,361)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, mito 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218276)
HIX0209020
HIT000626026 (
ENST00000526818
)
(Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase family protein.)
genome : 12,063,268 - 12,063,898 (631)
query : 1 - 631 (631/631)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, mito 5, extr 2, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209020)
HIX0025636
HIT000048289
(
AK128416
)
Representative transcript
(Conserved hypothetical protein.)
genome : 12,064,280 - 12,312,147 (247,868)
query : 1 - 3,022 (3,022/3,022)
3 exons
identity = 0.980
5'(0.928)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 10, nucl 3.5, cyto_nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025636)
HIX0218373
HIT000491348
(
AK296724
)
Representative transcript
(G-patch domain containing protein.)
genome : 10,582,909 - 10,697,357 (114,449)
query : 1 - 1,753 (1,753/1,753)
6 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000467 : G-patch domain
IPR009071 : High mobility group box domain
IPR021934 : Sox C-terminal transactivation domain
GO :
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218373)
HIX0218373
HIT000666768 (
ENST00000553390
)
(G-patch domain containing protein.)
genome : 10,582,909 - 10,697,357 (114,449)
query : 1 - 1,753 (1,753/1,753)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218373)
HIX0218373
HIT000668263 (
ENST00000554914
)
(G-patch domain containing protein.)
genome : 10,582,909 - 10,697,357 (114,449)
query : 1 - 1,753 (1,753/1,753)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218373)
HIX0218362
HIT000246860
(
AJ301562
)
Representative transcript
(Inactive L-threonine 3-dehydrogenase, mitochondrial; Precursor;)
genome : 11,197,146 - 11,225,961 (28,816)
query : 1 - 1,357 (1,357/1,357)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001509 : NAD-dependent epimerase/dehydratase, N-terminal domain
IPR016040 : NAD(P)-binding domain
GO :
0003824 : Molecular Function : catalytic activity
0044237 : Biological Process : cellular metabolic process
0050662 : Molecular Function : coenzyme binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 13, nucl 8.5, cyto_mito 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218362)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC058860
Danio
sp. (Zebrafish) : BC063962
Bos
sp. (Cow) : BC112535
Danio
sp. (Zebrafish) : BC142842
Gallus
sp. (Chicken) : BX950580
Monodelphis
sp. (Opossum) : ENSMODT00000011396
Oryzias
sp. (Medaka) : ENSORLT00000020514
Oryzias
sp. (Medaka) : ENSORLT00000021890
Pongo
sp. (Orangutan) : ENSPPYT00000021396
Takifugu
sp. (Fugu) : SINFRUT00000133863
Rattus
sp. (Rat) : XM_001065307
Equus
sp. (Horse) : XM_001915402
Pan
sp. (Chimpanzee) : XM_519604
Canis
sp. (Dog) : XM_534558
HIX0218362
HIT000320721 (
NR_001578
)
(Inactive L-threonine 3-dehydrogenase, mitochondrial; Precursor;)
genome : 11,197,146 - 11,225,961 (28,816)
query : 1 - 1,357 (1,357/1,357)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 13, nucl 8.5, cyto_mito 8.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218362)
HIX0218362
HIT000624489 (
ENST00000525246
)
(Inactive L-threonine 3-dehydrogenase, mitochondrial; Precursor;)
genome : 11,197,146 - 11,225,961 (28,816)
query : 1 - 1,357 (1,357/1,357)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 13, nucl 8.5, cyto_mito 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218362)
HIX0218362
HIT000112493 (
ENST00000284481
)
(Conserved hypothetical protein.)
genome : 11,225,911 - 11,296,166 (70,256)
query : 1 - 1,222 (1,222/1,222)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, extr 8, mito 5, cyto 4, extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218362)
HIX0218362
HIT000246861
(
AJ301563
)
(Conserved hypothetical protein.)
genome : 11,225,911 - 11,296,166 (70,256)
query : 1 - 1,222 (1,222/1,222)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, extr 8, mito 5, cyto 4, extr_plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218362)
HIX0218362
HIT000562998 (
NR_026814
)
(Conserved hypothetical protein.)
genome : 11,225,911 - 11,296,166 (70,256)
query : 1 - 1,222 (1,222/1,222)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, extr 8, mito 5, cyto 4, extr_plas 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218362)
HIX0034419
HIT000028853
(
AL834122
)
(Protein FAM167A;)
genome : 11,278,972 - 11,324,253 (45,282)
query : 13 - 4,079 (4,067/4,098)
3 exons
identity = 0.997
3'(0.997;0.996;1.000)5'
coverage = 0.997
InterPro :
IPR024280 : FAM167
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14.5, nucl 8, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034419)
HIX0034419
HIT000026109
(
AL157475
)
(Protein FAM167A.)
genome : 11,279,007 - 11,301,674 (22,668)
query : 1 - 3,283 (3,283/3,334)
2 exons
identity = 0.997
3'(0.997;0.993)5'
coverage = 1.000
InterPro :
IPR024280 : FAM167
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 8.5, nucl 7.5, cyto 6.5,
extr_plas 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034419)
HIX0034419
HIT000112495 (
ENST00000284486
)
(Protein FAM167A;)
genome : 11,278,972 - 11,324,276 (45,305)
query : 1 - 4,094 (4,094/4,094)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 13, nucl 8, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034419)
HIX0034419
HIT000317735 (
NM_053279
)
(Protein FAM167A;)
genome : 11,278,973 - 11,324,276 (45,304)
query : 1 - 4,093 (4,093/4,093)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 13, nucl 8, extr 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034419)
HIX0034419
HIT000246862
(
AJ301564
)
Representative transcript
(Protein FAM167A;)
genome : 11,278,973 - 11,324,185 (45,213)
query : 1 - 4,002 (4,002/4,002)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR024280 : FAM167
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 13, nucl 8, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034419)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB070117
Mus
sp. (Mouse) : BC065085
Bos
sp. (Cow) : BC123653
Danio
sp. (Zebrafish) : BC128790
Tetraodon
sp. (Tetraodon) : CR709646
Equus
sp. (Horse) : ENSECAT00000018905
Oryzias
sp. (Medaka) : ENSORLT00000020567
Pongo
sp. (Orangutan) : ENSPPYT00000021394
Takifugu
sp. (Fugu) : SINFRUT00000133873
Rattus
sp. (Rat) : XM_001065248
Pan
sp. (Chimpanzee) : XM_001139122
Gallus
sp. (Chicken) : XM_001233099
Monodelphis
sp. (Opossum) : XM_001372430
Canis
sp. (Dog) : XM_844686
HIX0034419
HIT000070456
(
AF124366
)
(Hypothetical protein.)
genome : 11,279,007 - 11,280,443 (1,437)
query : 66 - 1,504 (1,439/1,504)
1 exon
identity = 0.984
3'(0.984)5'
coverage = 0.957
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034419)
HIX0034419
HIT000337593
(
BC104041
)
(Protein FAM167A;)
genome : 11,280,076 - 11,302,281 (22,206)
query : 1 - 2,812 (2,812/2,812)
2 exons
identity = 1.000
3'(1.000;0.999)5'
coverage = 1.000
InterPro :
IPR024280 : FAM167
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14.5, nucl 8, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034419)
HIX0034419
HIT000337594
(
BC104042
)
(Protein FAM167A;)
genome : 11,280,076 - 11,302,281 (22,206)
query : 1 - 2,812 (2,812/2,812)
2 exons
identity = 0.999
3'(1.000;0.996)5'
coverage = 1.000
InterPro :
IPR024280 : FAM167
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 14, nucl 9, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034419)
HIX0034419
HIT000337595
(
BC104043
)
(Protein FAM167A;)
genome : 11,280,076 - 11,302,281 (22,206)
query : 1 - 2,812 (2,812/2,812)
2 exons
identity = 0.999
3'(1.000;0.996)5'
coverage = 1.000
InterPro :
IPR024280 : FAM167
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 14, nucl 9, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034419)
HIX0007316
HIT000021915
(
AK097060
)
(Transcription factor GATA-4; GATA-binding factor 4; xGATA-4;)
genome : 11,534,468 - 11,617,509 (83,042)
query : 1 - 2,614 (2,614/2,614)
7 exons
identity = 0.997
5'(1.000;0.996;1.000;1.000;1.000;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR000679 : Zinc finger, GATA-type
IPR013088 : Zinc finger, NHR/GATA-type
IPR028436 : Transcription factor GATA-4
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007316)
HIX0007316
HIT000627884 (
ENST00000528712
)
(Transcription factor GATA-4; GATA-binding factor 4; xGATA-4;)
genome : 11,534,468 - 11,617,509 (83,042)
query : 1 - 2,614 (2,614/2,614)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007316)
HIX0007316
HIT000625924 (
ENST00000526716
)
(Transcription factor GATA-4; GATA-binding factor 4; xGATA-4;)
genome : 11,561,660 - 11,614,591 (52,932)
query : 1 - 686 (686/686)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007316)
HIX0007316
HIT000129387 (
ENST00000335135
)
(Transcription factor GATA-4; GATA-binding factor 4;)
genome : 11,561,713 - 11,617,511 (55,799)
query : 1 - 3,414 (3,414/3,414)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007316)
HIX0007316
HIT000198977 (
NM_002052
)
(Transcription factor GATA-4; GATA-binding factor 4;)
genome : 11,561,717 - 11,617,509 (55,793)
query : 1 - 3,408 (3,408/3,419)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007316)
HIX0007316
HIT000101744
(
D78260
)
(Transcription factor GATA-4; GATA-binding factor 4; Fragment;)
genome : 11,565,538 - 11,616,232 (50,695)
query : 21 - 1,869 (1,849/1,869)
6 exons
identity = 0.988
5'(0.974;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.989
InterPro :
IPR000679 : Zinc finger, GATA-type
IPR008013 : GATA-type transcription activator, N-terminal
IPR013088 : Zinc finger, NHR/GATA-type
IPR028436 : Transcription factor GATA-4
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0043565 : Molecular Function : sequence-specific DNA binding
0045893 : Biological Process : positive regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007316)
HIX0007316
HIT000193160
(
L34357
)
(Transcription factor GATA-4; GATA-binding factor 4;)
genome : 11,565,582 - 11,616,640 (51,059)
query : 1 - 2,226 (2,226/2,226)
6 exons
identity = 0.990
5'(0.985;0.994;1.000;0.989;1.000;0.992)3'
coverage = 1.000
InterPro :
IPR000679 : Zinc finger, GATA-type
IPR008013 : GATA-type transcription activator, N-terminal
IPR013088 : Zinc finger, NHR/GATA-type
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0043565 : Molecular Function : sequence-specific DNA binding
0045893 : Biological Process : positive regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007316)
HIX0007316
HIT000336941
(
BC101580
)
Representative transcript
(Transcription factor GATA-4; GATA-binding factor 4;)
genome : 11,565,742 - 11,616,031 (50,290)
query : 1 - 1,456 (1,456/1,456)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000679 : Zinc finger, GATA-type
IPR008013 : GATA-type transcription activator, N-terminal
IPR013088 : Zinc finger, NHR/GATA-type
IPR028436 : Transcription factor GATA-4
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0043565 : Molecular Function : sequence-specific DNA binding
0045893 : Biological Process : positive regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007316)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AB075549
Danio
sp. (Zebrafish) : AF191577
Bos
sp. (Cow) : AJ316283
Canis
sp. (Dog) : DQ666280
Oryzias
sp. (Medaka) : EF546466
Equus
sp. (Horse) : ENSECAT00000021620
Pongo
sp. (Orangutan) : ENSPPYT00000021390
Tetraodon
sp. (Tetraodon) : GSTENT00030351001
Rattus
sp. (Rat) : L22761
Takifugu
sp. (Fugu) : SINFRUT00000149929
Gallus
sp. (Chicken) : U11887
Macaca
sp. (Macaque) : XM_001087251
Monodelphis
sp. (Opossum) : XM_001381601
Pan
sp. (Chimpanzee) : XM_528070
HIX0007316
HIT000501889
(
BC143434
)
(Transcription factor GATA-4; GATA-binding factor 4;)
genome : 11,565,742 - 11,616,031 (50,290)
query : 1 - 1,456 (1,456/1,456)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000679 : Zinc finger, GATA-type
IPR008013 : GATA-type transcription activator, N-terminal
IPR013088 : Zinc finger, NHR/GATA-type
IPR028436 : Transcription factor GATA-4
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0043565 : Molecular Function : sequence-specific DNA binding
0045893 : Biological Process : positive regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007316)
HIX0007316
HIT000501933
(
BC143479
)
(Transcription factor GATA-4; GATA-binding factor 4;)
genome : 11,565,742 - 11,616,031 (50,290)
query : 1 - 1,459 (1,459/1,459)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000679 : Zinc finger, GATA-type
IPR008013 : GATA-type transcription activator, N-terminal
IPR013088 : Zinc finger, NHR/GATA-type
IPR028436 : Transcription factor GATA-4
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0043565 : Molecular Function : sequence-specific DNA binding
0045893 : Biological Process : positive regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007316)
HIX0007316
HIT000631171 (
ENST00000532059
)
(Transcription factor GATA-4; GATA-binding factor 4;)
genome : 11,565,742 - 11,616,031 (50,290)
query : 1 - 1,459 (1,459/1,459)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007316)
HIX0007316
HIT000338196
(
BC105108
)
(Transcription factor GATA-4; GATA-binding factor 4;)
genome : 11,565,744 - 11,616,031 (50,288)
query : 1 - 1,454 (1,454/1,454)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000679 : Zinc finger, GATA-type
IPR008013 : GATA-type transcription activator, N-terminal
IPR013088 : Zinc finger, NHR/GATA-type
IPR028436 : Transcription factor GATA-4
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0043565 : Molecular Function : sequence-specific DNA binding
0045893 : Biological Process : positive regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007316)
HIX0007316
HIT000257427
(
AY740706
)
(Transcription factor GATA-4; GATA-binding factor 4;)
genome : 11,565,819 - 11,615,984 (50,166)
query : 1 - 1,332 (1,332/1,332)
6 exons
identity = 0.999
5'(1.000;1.000;0.992;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000679 : Zinc finger, GATA-type
IPR008013 : GATA-type transcription activator, N-terminal
IPR013088 : Zinc finger, NHR/GATA-type
IPR028436 : Transcription factor GATA-4
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0043565 : Molecular Function : sequence-specific DNA binding
0045893 : Biological Process : positive regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007316)
HIX0007319
HIT000014333
(
AK057726
)
(Squalene synthase; SQS; SS; EC=2.5.1.21; FPP:FPP farnesyltransferase; Farnesyl-diphosphate farnesyltransferase;)
genome : 11,653,082 - 11,696,476 (43,395)
query : 1 - 1,952 (1,952/1,952)
8 exons
identity = 0.997
5'(0.993;1.000;0.995;1.000;0.995;1.000;1.000;
0.998)3'
coverage = 1.000
EC number :
EC 2.5.1.21
KEGG pathway :
00909 : Sesquiterpenoid and triterpenoid biosynthesis (64)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR002060 : Squalene/phytoene synthase
IPR006449 : Farnesyl-diphosphate farnesyltransferase
IPR008949 : Isoprenoid synthase domain
IPR019845 : Squalene/phytoene synthase, conserved site
GO :
0004310 : Molecular Function : farnesyl-diphosphate farnesyltransferase activity
0008610 : Biological Process : lipid biosynthetic process
0009058 : Biological Process : biosynthetic process
0016021 : Cellular Component : integral component of membrane
0016740 : Molecular Function : transferase activity
0016765 : Molecular Function : transferase activity, transferring alkyl or aryl (other than methyl) groups
SOSUI :
MEMBRANE PROTEIN
PSORT :
cysk 25, cyto 4.5, cyto_nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007319)
HIX0007319
HIT000637734 (
ENST00000538689
)
(Squalene synthase; SQS; SS; EC=2.5.1.21; FPP:FPP farnesyltransferase; Farnesyl-diphosphate farnesyltransferase;)
genome : 11,653,082 - 11,696,476 (43,395)
query : 1 - 1,952 (1,952/1,952)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.21
KEGG pathway :
00909 : Sesquiterpenoid and triterpenoid biosynthesis (64)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 27, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007319)
HIX0007319
HIT000629487 (
ENST00000530337
)
(Squalene synthase; SQS; SS; EC=2.5.1.21; FPP:FPP farnesyltransferase; Farnesyl-diphosphate farnesyltransferase;)
genome : 11,659,748 - 11,679,327 (19,580)
query : 1 - 741 (741/741)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.21
KEGG pathway :
00909 : Sesquiterpenoid and triterpenoid biosynthesis (64)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 6, mito 6, E.R. 3, extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007319)
HIX0007319
HIT000103466 (
ENST00000220584
)
(Squalene synthase; SQS; SS; EC=2.5.1.21; FPP:FPP farnesyltransferase; Farnesyl-diphosphate farnesyltransferase;)
genome : 11,660,120 - 11,696,818 (36,699)
query : 1 - 2,176 (2,176/2,176)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.21
KEGG pathway :
00909 : Sesquiterpenoid and triterpenoid biosynthesis (64)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 20, cyto_nucl 12.8333, cyto_plas 10.8333,
nucl 4.5, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007319)
HIX0007319
HIT000544265 (
ENST00000446331
)
(Squalene synthase; SQS; SS; EC=2.5.1.21; FPP:FPP farnesyltransferase; Farnesyl-diphosphate farnesyltransferase;)
genome : 11,660,152 - 11,696,719 (36,568)
query : 1 - 1,558 (1,558/1,558)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.21
KEGG pathway :
00909 : Sesquiterpenoid and triterpenoid biosynthesis (64)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 17, nucl 15, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007319)
HIX0007319
HIT000201210 (
NM_004462
)
(Squalene synthase; SQS; SS; EC=2.5.1.21; FPP:FPP farnesyltransferase; Farnesyl-diphosphate farnesyltransferase;)
genome : 11,660,190 - 11,696,818 (36,629)
query : 1 - 2,106 (2,106/2,115)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.21
KEGG pathway :
00909 : Sesquiterpenoid and triterpenoid biosynthesis (64)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 20, cyto_nucl 12.8333, cyto_plas 10.8333,
nucl 4.5, E.R. 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007319)
HIX0007319
HIT000490667
(
AK296043
)
(Squalene synthase; SQS; SS; EC=2.5.1.21; FPP:FPP farnesyltransferase; Farnesyl-diphosphate farnesyltransferase;)
genome : 11,660,248 - 11,696,292 (36,045)
query : 1 - 1,393 (1,393/1,393)
7 exons
identity = 0.998
5'(1.000;1.000;1.000;0.990;1.000;1.000;0.997)3'
coverage = 1.000
EC number :
EC 2.5.1.21
KEGG pathway :
00909 : Sesquiterpenoid and triterpenoid biosynthesis (64)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR002060 : Squalene/phytoene synthase
IPR006449 : Farnesyl-diphosphate farnesyltransferase
IPR008949 : Isoprenoid synthase domain
IPR019845 : Squalene/phytoene synthase, conserved site
GO :
0004310 : Molecular Function : farnesyl-diphosphate farnesyltransferase activity
0008610 : Biological Process : lipid biosynthetic process
0009058 : Biological Process : biosynthetic process
0016021 : Cellular Component : integral component of membrane
0016740 : Molecular Function : transferase activity
0016765 : Molecular Function : transferase activity, transferring alkyl or aryl (other than methyl) groups
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 18, cyto_nucl 12, nucl 4, mito 3, E.R. 3,
E.R._mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007319)
HIX0007319
HIT000541548 (
ENST00000443614
)
(Squalene synthase; SQS; SS; EC=2.5.1.21; FPP:FPP farnesyltransferase; Farnesyl-diphosphate farnesyltransferase;)
genome : 11,660,248 - 11,696,292 (36,045)
query : 1 - 1,393 (1,393/1,393)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.21
KEGG pathway :
00909 : Sesquiterpenoid and triterpenoid biosynthesis (64)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 18, cyto_nucl 12, nucl 4, mito 3, E.R. 3,
E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007319)
HIX0007319
HIT000499606
(
AK315993
)
(Squalene synthase; SQS; SS; EC=2.5.1.21; FPP:FPP farnesyltransferase; Farnesyl-diphosphate farnesyltransferase;)
genome : 11,660,250 - 11,696,348 (36,099)
query : 1 - 1,773 (1,773/1,773)
9 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.995;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.21
KEGG pathway :
00909 : Sesquiterpenoid and triterpenoid biosynthesis (64)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR002060 : Squalene/phytoene synthase
IPR006449 : Farnesyl-diphosphate farnesyltransferase
IPR008949 : Isoprenoid synthase domain
IPR019845 : Squalene/phytoene synthase, conserved site
GO :
0004310 : Molecular Function : farnesyl-diphosphate farnesyltransferase activity
0008610 : Biological Process : lipid biosynthetic process
0009058 : Biological Process : biosynthetic process
0016021 : Cellular Component : integral component of membrane
0016740 : Molecular Function : transferase activity
0016765 : Molecular Function : transferase activity, transferring alkyl or aryl (other than methyl) groups
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 17, cyto_nucl 13, nucl 5, pero 5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007319)
HIX0007319
HIT000624836 (
ENST00000525607
)
(Squalene synthase; SQS; SS; EC=2.5.1.21; FPP:FPP farnesyltransferase; Farnesyl-diphosphate farnesyltransferase;)
genome : 11,660,250 - 11,696,348 (36,099)
query : 1 - 1,773 (1,773/1,773)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.21
KEGG pathway :
00909 : Sesquiterpenoid and triterpenoid biosynthesis (64)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 17, cyto_nucl 13, nucl 5, pero 5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007319)
HIX0007319
HIT000624526 (
ENST00000525283
)
(Squalene synthase; SQS; SS; EC=2.5.1.21; FPP:FPP farnesyltransferase; Farnesyl-diphosphate farnesyltransferase;)
genome : 11,660,250 - 11,689,176 (28,927)
query : 1 - 898 (898/898)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.21
KEGG pathway :
00909 : Sesquiterpenoid and triterpenoid biosynthesis (64)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15.5, nucl 11, mito 2, pero 2,
mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007319)
HIX0007319
HIT000322964
(
X69141
)
(Squalene synthase; SQS; SS; EC=2.5.1.21; FPP:FPP farnesyltransferase; Farnesyl-diphosphate farnesyltransferase;)
genome : 11,660,255 - 11,696,807 (36,553)
query : 5 - 2,034 (2,030/2,051)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.995;1.000;1.000;
0.999)3'
coverage = 0.998
EC number :
EC 2.5.1.21
KEGG pathway :
00909 : Sesquiterpenoid and triterpenoid biosynthesis (64)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR002060 : Squalene/phytoene synthase
IPR006449 : Farnesyl-diphosphate farnesyltransferase
IPR008949 : Isoprenoid synthase domain
IPR019845 : Squalene/phytoene synthase, conserved site
GO :
0004310 : Molecular Function : farnesyl-diphosphate farnesyltransferase activity
0008610 : Biological Process : lipid biosynthetic process
0009058 : Biological Process : biosynthetic process
0016021 : Cellular Component : integral component of membrane
0016740 : Molecular Function : transferase activity
0016765 : Molecular Function : transferase activity, transferring alkyl or aryl (other than methyl) groups
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 12.8333, cyto_plas 10.8333,
nucl 4.5, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007319)
HIX0007319
HIT000430112
(
AK311246
)
(Squalene synthase; SQS; SS; EC=2.5.1.21; FPP:FPP farnesyltransferase; Farnesyl-diphosphate farnesyltransferase;)
genome : 11,660,255 - 11,689,090 (28,836)
query : 1 - 932 (932/932)
6 exons
identity = 0.997
5'(1.000;1.000;1.000;0.995;0.989;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.21
KEGG pathway :
00909 : Sesquiterpenoid and triterpenoid biosynthesis (64)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR002060 : Squalene/phytoene synthase
IPR006449 : Farnesyl-diphosphate farnesyltransferase
IPR008949 : Isoprenoid synthase domain
IPR019845 : Squalene/phytoene synthase, conserved site
GO :
0004310 : Molecular Function : farnesyl-diphosphate farnesyltransferase activity
0008610 : Biological Process : lipid biosynthetic process
0009058 : Biological Process : biosynthetic process
0016021 : Cellular Component : integral component of membrane
0016740 : Molecular Function : transferase activity
0016765 : Molecular Function : transferase activity, transferring alkyl or aryl (other than methyl) groups
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 3, mito 2, pero 2, lyso 2, mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007319)
HIX0007319
HIT000628621 (
ENST00000529464
)
(Squalene synthase; SQS; SS; EC=2.5.1.21; FPP:FPP farnesyltransferase; Farnesyl-diphosphate farnesyltransferase;)
genome : 11,660,255 - 11,689,090 (28,836)
query : 1 - 932 (932/932)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.21
KEGG pathway :
00909 : Sesquiterpenoid and triterpenoid biosynthesis (64)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 3, mito 2, lyso 2, cyto_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007319)
HIX0007319
HIT000496241
(
AK301617
)
(Squalene synthase; SQS; SS; EC=2.5.1.21; FPP:FPP farnesyltransferase; Farnesyl-diphosphate farnesyltransferase;)
genome : 11,660,259 - 11,696,719 (36,461)
query : 1 - 1,451 (1,451/1,451)
5 exons
identity = 0.999
5'(1.000;0.993;1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 2.5.1.21
KEGG pathway :
00909 : Sesquiterpenoid and triterpenoid biosynthesis (64)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR002060 : Squalene/phytoene synthase
IPR006449 : Farnesyl-diphosphate farnesyltransferase
IPR008949 : Isoprenoid synthase domain
IPR019845 : Squalene/phytoene synthase, conserved site
GO :
0004310 : Molecular Function : farnesyl-diphosphate farnesyltransferase activity
0008610 : Biological Process : lipid biosynthetic process
0009058 : Biological Process : biosynthetic process
0016021 : Cellular Component : integral component of membrane
0016740 : Molecular Function : transferase activity
0016765 : Molecular Function : transferase activity, transferring alkyl or aryl (other than methyl) groups
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 17, nucl 15, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007319)
HIX0007319
HIT000031611
(
BC003573
)
Representative transcript
(Squalene synthase; SQS; SS; EC=2.5.1.21; FPP:FPP farnesyltransferase; Farnesyl-diphosphate farnesyltransferase;)
genome : 11,660,273 - 11,697,212 (36,940)
query : 1 - 1,435 (1,435/1,442)
9 exons
identity = 0.990
5'(1.000;1.000;0.995;1.000;0.995;1.000;0.993;
0.979;0.891)3'
coverage = 0.995
EC number :
EC 2.5.1.21
KEGG pathway :
00909 : Sesquiterpenoid and triterpenoid biosynthesis (64)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR002060 : Squalene/phytoene synthase
IPR006449 : Farnesyl-diphosphate farnesyltransferase
IPR008949 : Isoprenoid synthase domain
IPR019845 : Squalene/phytoene synthase, conserved site
GO :
0004310 : Molecular Function : farnesyl-diphosphate farnesyltransferase activity
0008610 : Biological Process : lipid biosynthetic process
0009058 : Biological Process : biosynthetic process
0016021 : Cellular Component : integral component of membrane
0016740 : Molecular Function : transferase activity
0016765 : Molecular Function : transferase activity, transferring alkyl or aryl (other than methyl) groups
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 20, cyto_nucl 12.8333, cyto_plas 10.8333,
nucl 4.5, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007319)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ719973
Mus
sp. (Mouse) : AK136159
Bos
sp. (Cow) : BC109959
Pongo
sp. (Orangutan) : CR860391
Monodelphis
sp. (Opossum) : ENSMODT00000030413
Oryzias
sp. (Medaka) : ENSORLT00000021716
Tetraodon
sp. (Tetraodon) : GSTENT00030353001
Rattus
sp. (Rat) : M95591
Takifugu
sp. (Fugu) : SINFRUT00000149927
Macaca
sp. (Macaque) : XM_001086070
Pan
sp. (Chimpanzee) : XM_001141161
Equus
sp. (Horse) : XM_001915448
Canis
sp. (Dog) : XM_534557
Danio
sp. (Zebrafish) : XM_695555
HIX0007319
HIT000034231
(
BC009251
)
(Squalene synthase; SQS; SS; EC=2.5.1.21; FPP:FPP farnesyltransferase; Farnesyl-diphosphate farnesyltransferase;)
genome : 11,660,273 - 11,696,470 (36,198)
query : 1 - 1,675 (1,675/1,700)
8 exons
identity = 0.998
5'(0.994;0.990;1.000;1.000;0.995;1.000;1.000;
0.998)3'
coverage = 1.000
EC number :
EC 2.5.1.21
KEGG pathway :
00909 : Sesquiterpenoid and triterpenoid biosynthesis (64)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR002060 : Squalene/phytoene synthase
IPR006449 : Farnesyl-diphosphate farnesyltransferase
IPR008949 : Isoprenoid synthase domain
IPR019845 : Squalene/phytoene synthase, conserved site
GO :
0004310 : Molecular Function : farnesyl-diphosphate farnesyltransferase activity
0008610 : Biological Process : lipid biosynthetic process
0009058 : Biological Process : biosynthetic process
0016021 : Cellular Component : integral component of membrane
0016740 : Molecular Function : transferase activity
0016765 : Molecular Function : transferase activity, transferring alkyl or aryl (other than methyl) groups
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 21, cyto_nucl 13.3333, cyto_plas 11.3333,
nucl 4.5, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007319)
HIX0007319
HIT000625121 (
ENST00000525900
)
(Squalene synthase; SQS; SS; EC=2.5.1.21; FPP:FPP farnesyltransferase; Farnesyl-diphosphate farnesyltransferase;)
genome : 11,660,275 - 11,696,414 (36,140)
query : 1 - 1,596 (1,596/1,596)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.21
KEGG pathway :
00909 : Sesquiterpenoid and triterpenoid biosynthesis (64)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 13.3333, cyto_plas 11.1667,
nucl 4, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007319)
HIX0007319
HIT000216693
(
S76822
)
(Squalene synthase; SQS; SS; EC=2.5.1.21; FPP:FPP farnesyltransferase; Farnesyl-diphosphate farnesyltransferase;)
genome : 11,660,277 - 11,696,474 (36,198)
query : 1 - 1,654 (1,654/1,673)
8 exons
identity = 0.979
5'(1.000;0.990;1.000;1.000;0.995;1.000;1.000;
0.943)3'
coverage = 1.000
EC number :
EC 2.5.1.21
KEGG pathway :
00909 : Sesquiterpenoid and triterpenoid biosynthesis (64)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR002060 : Squalene/phytoene synthase
IPR006449 : Farnesyl-diphosphate farnesyltransferase
IPR008949 : Isoprenoid synthase domain
IPR019845 : Squalene/phytoene synthase, conserved site
GO :
0004310 : Molecular Function : farnesyl-diphosphate farnesyltransferase activity
0008610 : Biological Process : lipid biosynthetic process
0009058 : Biological Process : biosynthetic process
0016021 : Cellular Component : integral component of membrane
0016740 : Molecular Function : transferase activity
0016765 : Molecular Function : transferase activity, transferring alkyl or aryl (other than methyl) groups
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 21, cyto_nucl 13.3333, cyto_plas 11.3333,
nucl 4.5, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007319)
HIX0007319
HIT000083097
(
AY007159
)
(Squalene synthase; SQS; SS; EC=2.5.1.21; FPP:FPP farnesyltransferase; Farnesyl-diphosphate farnesyltransferase;)
genome : 11,660,298 - 11,696,410 (36,113)
query : 1 - 1,590 (1,590/1,590)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.995;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.21
KEGG pathway :
00909 : Sesquiterpenoid and triterpenoid biosynthesis (64)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR002060 : Squalene/phytoene synthase
IPR006449 : Farnesyl-diphosphate farnesyltransferase
IPR008949 : Isoprenoid synthase domain
IPR019845 : Squalene/phytoene synthase, conserved site
GO :
0004310 : Molecular Function : farnesyl-diphosphate farnesyltransferase activity
0008610 : Biological Process : lipid biosynthetic process
0009058 : Biological Process : biosynthetic process
0016021 : Cellular Component : integral component of membrane
0016740 : Molecular Function : transferase activity
0016765 : Molecular Function : transferase activity, transferring alkyl or aryl (other than methyl) groups
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 20, cyto_nucl 12.8333, cyto_plas 10.8333,
nucl 4.5, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007319)
HIX0007319
HIT000191697
(
L06105
)
(Squalene synthase; SQS; SS; EC=2.5.1.21; FPP:FPP farnesyltransferase; Farnesyl-diphosphate farnesyltransferase;)
genome : 11,660,300 - 11,696,469 (36,170)
query : 1 - 1,649 (1,649/1,649)
8 exons
identity = 0.996
5'(0.986;1.000;1.000;1.000;0.995;1.000;0.993;
0.997)3'
coverage = 1.000
EC number :
EC 2.5.1.21
KEGG pathway :
00909 : Sesquiterpenoid and triterpenoid biosynthesis (64)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR002060 : Squalene/phytoene synthase
IPR006449 : Farnesyl-diphosphate farnesyltransferase
IPR008949 : Isoprenoid synthase domain
IPR019845 : Squalene/phytoene synthase, conserved site
GO :
0004310 : Molecular Function : farnesyl-diphosphate farnesyltransferase activity
0008610 : Biological Process : lipid biosynthetic process
0009058 : Biological Process : biosynthetic process
0016021 : Cellular Component : integral component of membrane
0016740 : Molecular Function : transferase activity
0016765 : Molecular Function : transferase activity, transferring alkyl or aryl (other than methyl) groups
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 20, cyto_nucl 12.8333, cyto_plas 10.8333,
nucl 4.5, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007319)
HIX0007319
HIT000040851
(
BC029641
)
(Squalene synthase; SQS; SS; EC=2.5.1.21; FPP:FPP farnesyltransferase; Farnesyl-diphosphate farnesyltransferase;)
genome : 11,660,310 - 11,696,468 (36,159)
query : 1 - 1,636 (1,636/1,664)
8 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.995;1.000;1.000;
0.997)3'
coverage = 0.998
EC number :
EC 2.5.1.21
KEGG pathway :
00909 : Sesquiterpenoid and triterpenoid biosynthesis (64)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR002060 : Squalene/phytoene synthase
IPR006449 : Farnesyl-diphosphate farnesyltransferase
IPR008949 : Isoprenoid synthase domain
IPR019845 : Squalene/phytoene synthase, conserved site
GO :
0004310 : Molecular Function : farnesyl-diphosphate farnesyltransferase activity
0008610 : Biological Process : lipid biosynthetic process
0009058 : Biological Process : biosynthetic process
0016021 : Cellular Component : integral component of membrane
0016740 : Molecular Function : transferase activity
0016765 : Molecular Function : transferase activity, transferring alkyl or aryl (other than methyl) groups
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 20, cyto_nucl 12.8333, cyto_plas 10.8333,
nucl 4.5, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007319)
HIX0007319
HIT000093435
(
BC034440
)
(Squalene synthase; SQS; SS; EC=2.5.1.21; FPP:FPP farnesyltransferase; Farnesyl-diphosphate farnesyltransferase;)
genome : 11,660,310 - 11,696,470 (36,161)
query : 1 - 1,638 (1,638/1,663)
8 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.995;1.000;1.000;
0.997)3'
coverage = 1.000
EC number :
EC 2.5.1.21
KEGG pathway :
00909 : Sesquiterpenoid and triterpenoid biosynthesis (64)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR002060 : Squalene/phytoene synthase
IPR006449 : Farnesyl-diphosphate farnesyltransferase
IPR008949 : Isoprenoid synthase domain
IPR019845 : Squalene/phytoene synthase, conserved site
GO :
0004310 : Molecular Function : farnesyl-diphosphate farnesyltransferase activity
0008610 : Biological Process : lipid biosynthetic process
0009058 : Biological Process : biosynthetic process
0016021 : Cellular Component : integral component of membrane
0016740 : Molecular Function : transferase activity
0016765 : Molecular Function : transferase activity, transferring alkyl or aryl (other than methyl) groups
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 20, cyto_nucl 12.8333, cyto_plas 10.8333,
nucl 4.5, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007319)
HIX0007319
HIT000191694
(
L06070
)
(Squalene synthase; SQS; SS; EC=2.5.1.21; FPP:FPP farnesyltransferase; Farnesyl-diphosphate farnesyltransferase;)
genome : 11,660,333 - 11,696,175 (35,843)
query : 1 - 1,320 (1,320/1,320)
8 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.995;0.994;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.21
KEGG pathway :
00909 : Sesquiterpenoid and triterpenoid biosynthesis (64)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR002060 : Squalene/phytoene synthase
IPR006449 : Farnesyl-diphosphate farnesyltransferase
IPR008949 : Isoprenoid synthase domain
IPR019845 : Squalene/phytoene synthase, conserved site
GO :
0004310 : Molecular Function : farnesyl-diphosphate farnesyltransferase activity
0008610 : Biological Process : lipid biosynthetic process
0009058 : Biological Process : biosynthetic process
0016021 : Cellular Component : integral component of membrane
0016740 : Molecular Function : transferase activity
0016765 : Molecular Function : transferase activity, transferring alkyl or aryl (other than methyl) groups
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 20, cyto_nucl 12.8333, cyto_plas 10.8333,
nucl 4.5, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007319)
HIX0007319
HIT000099624
(
BT006704
)
(Squalene synthase; SQS; SS; EC=2.5.1.21; FPP:FPP farnesyltransferase; Farnesyl-diphosphate farnesyltransferase;)
genome : 11,660,342 - 11,696,116 (35,775)
query : 1 - 1,252 (1,252/1,254)
8 exons
identity = 0.998
5'(1.000;1.000;0.995;1.000;0.995;1.000;0.993;
1.000)3'
coverage = 0.998
EC number :
EC 2.5.1.21
KEGG pathway :
00909 : Sesquiterpenoid and triterpenoid biosynthesis (64)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR002060 : Squalene/phytoene synthase
IPR006449 : Farnesyl-diphosphate farnesyltransferase
IPR008949 : Isoprenoid synthase domain
IPR019845 : Squalene/phytoene synthase, conserved site
GO :
0004310 : Molecular Function : farnesyl-diphosphate farnesyltransferase activity
0008610 : Biological Process : lipid biosynthetic process
0009058 : Biological Process : biosynthetic process
0016021 : Cellular Component : integral component of membrane
0016740 : Molecular Function : transferase activity
0016765 : Molecular Function : transferase activity, transferring alkyl or aryl (other than methyl) groups
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 20, cyto_nucl 12.8333, cyto_plas 10.8333,
nucl 4.5, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007319)
HIX0007319
HIT000267883
(
CR457033
)
(Squalene synthase; SQS; SS; EC=2.5.1.21; FPP:FPP farnesyltransferase; Farnesyl-diphosphate farnesyltransferase;)
genome : 11,660,342 - 11,696,114 (35,773)
query : 1 - 1,250 (1,250/1,254)
8 exons
identity = 0.998
5'(1.000;1.000;0.995;1.000;0.995;1.000;0.993;
1.000)3'
coverage = 0.997
EC number :
EC 2.5.1.21
KEGG pathway :
00909 : Sesquiterpenoid and triterpenoid biosynthesis (64)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR002060 : Squalene/phytoene synthase
IPR006449 : Farnesyl-diphosphate farnesyltransferase
IPR008949 : Isoprenoid synthase domain
IPR019845 : Squalene/phytoene synthase, conserved site
GO :
0004310 : Molecular Function : farnesyl-diphosphate farnesyltransferase activity
0008610 : Biological Process : lipid biosynthetic process
0009058 : Biological Process : biosynthetic process
0016021 : Cellular Component : integral component of membrane
0016740 : Molecular Function : transferase activity
0016765 : Molecular Function : transferase activity, transferring alkyl or aryl (other than methyl) groups
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 20, cyto_nucl 12.8333, cyto_plas 10.8333,
nucl 4.5, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007319)
HIX0007319
HIT000627983 (
ENST00000528812
)
(Squalene synthase; SQS; SS; EC=2.5.1.21; FPP:FPP farnesyltransferase; Farnesyl-diphosphate farnesyltransferase;)
genome : 11,660,521 - 11,696,469 (35,949)
query : 1 - 2,013 (2,013/2,013)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.21
KEGG pathway :
00909 : Sesquiterpenoid and triterpenoid biosynthesis (64)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 17, cyto_nucl 13, nucl 5, pero 5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007319)
HIX0007319
HIT000430228
(
AK311362
)
(Squalene synthase; SQS; SS; EC=2.5.1.21; FPP:FPP farnesyltransferase; Farnesyl-diphosphate farnesyltransferase;)
genome : 11,660,521 - 11,683,599 (23,079)
query : 1 - 985 (985/985)
5 exons
identity = 0.998
5'(0.998;1.000;0.995;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.21
KEGG pathway :
00909 : Sesquiterpenoid and triterpenoid biosynthesis (64)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR002060 : Squalene/phytoene synthase
IPR008949 : Isoprenoid synthase domain
IPR019845 : Squalene/phytoene synthase, conserved site
GO :
0009058 : Biological Process : biosynthetic process
0016740 : Molecular Function : transferase activity
0016765 : Molecular Function : transferase activity, transferring alkyl or aryl (other than methyl) groups
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 3.5, cyto_nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007319)
HIX0007319
HIT000499964
(
AK316351
)
(Squalene synthase; SQS; SS; EC=2.5.1.21; FPP:FPP farnesyltransferase; Farnesyl-diphosphate farnesyltransferase;)
genome : 11,660,633 - 11,696,294 (35,662)
query : 1 - 1,433 (1,433/1,433)
8 exons
identity = 0.998
5'(1.000;1.000;0.995;1.000;0.995;1.000;0.993;
1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.21
KEGG pathway :
00909 : Sesquiterpenoid and triterpenoid biosynthesis (64)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR002060 : Squalene/phytoene synthase
IPR006449 : Farnesyl-diphosphate farnesyltransferase
IPR008949 : Isoprenoid synthase domain
IPR019845 : Squalene/phytoene synthase, conserved site
GO :
0004310 : Molecular Function : farnesyl-diphosphate farnesyltransferase activity
0008610 : Biological Process : lipid biosynthetic process
0009058 : Biological Process : biosynthetic process
0016021 : Cellular Component : integral component of membrane
0016740 : Molecular Function : transferase activity
0016765 : Molecular Function : transferase activity, transferring alkyl or aryl (other than methyl) groups
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 11, cyto_nucl 10.5, nucl 9.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007319)
HIX0007319
HIT000499646
(
AK316033
)
(Squalene synthase; SQS; SS; EC=2.5.1.21; FPP:FPP farnesyltransferase; Farnesyl-diphosphate farnesyltransferase;)
genome : 11,660,688 - 11,696,469 (35,782)
query : 3 - 1,848 (1,846/1,848)
8 exons
identity = 0.997
5'(0.997;1.000;1.000;1.000;0.990;1.000;1.000;
0.997)3'
coverage = 0.999
EC number :
EC 2.5.1.21
KEGG pathway :
00909 : Sesquiterpenoid and triterpenoid biosynthesis (64)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR002060 : Squalene/phytoene synthase
IPR006449 : Farnesyl-diphosphate farnesyltransferase
IPR008949 : Isoprenoid synthase domain
IPR019845 : Squalene/phytoene synthase, conserved site
GO :
0004310 : Molecular Function : farnesyl-diphosphate farnesyltransferase activity
0008610 : Biological Process : lipid biosynthetic process
0009058 : Biological Process : biosynthetic process
0016021 : Cellular Component : integral component of membrane
0016740 : Molecular Function : transferase activity
0016765 : Molecular Function : transferase activity, transferring alkyl or aryl (other than methyl) groups
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 13, nucl 5, pero 5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007319)
HIX0007319
HIT000494869
(
AK300245
)
(Squalene synthase; SQS; SS; EC=2.5.1.21; FPP:FPP farnesyltransferase; Farnesyl-diphosphate farnesyltransferase;)
genome : 11,660,930 - 11,696,224 (35,295)
query : 1 - 1,193 (1,193/1,193)
7 exons
identity = 0.989
5'(1.000;0.990;0.989;1.000;0.966;0.987;0.997)3'
coverage = 1.000
EC number :
EC 2.5.1.21
KEGG pathway :
00909 : Sesquiterpenoid and triterpenoid biosynthesis (64)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR002060 : Squalene/phytoene synthase
IPR006449 : Farnesyl-diphosphate farnesyltransferase
IPR008949 : Isoprenoid synthase domain
IPR019845 : Squalene/phytoene synthase, conserved site
GO :
0004310 : Molecular Function : farnesyl-diphosphate farnesyltransferase activity
0008610 : Biological Process : lipid biosynthetic process
0009058 : Biological Process : biosynthetic process
0016021 : Cellular Component : integral component of membrane
0016740 : Molecular Function : transferase activity
0016765 : Molecular Function : transferase activity, transferring alkyl or aryl (other than methyl) groups
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 21, pero 4, nucl 2.5, mito 2, cyto_nucl 2,
lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007319)
HIX0007320
HIT000335201
(
BC095408
)
(Cathepsin B; EC=3.4.22.1; APP secretase; APPS; Cathepsin B1; Contains: Cathepsin B light chain; Contains: Cathepsin B heavy chain; Precursor;)
genome : 11,700,035 - 11,725,596 (25,562)
query : 1 - 3,728 (3,728/3,743)
10 exons
identity = 0.991
3'(0.987;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.22.1
InterPro :
IPR000169 : Cysteine peptidase, cysteine active site
IPR000668 : Peptidase C1A, papain C-terminal
IPR012599 : Peptidase C1A, propeptide
IPR013128 : Peptidase C1A
IPR015643 : Peptidase C1A, cathepsin B
IPR025660 : Cysteine peptidase, histidine active site
IPR025661 : Cysteine peptidase, asparagine active site
GO :
0004197 : Molecular Function : cysteine-type endopeptidase activity
0006508 : Biological Process : proteolysis
0008234 : Molecular Function : cysteine-type peptidase activity
0050790 : Biological Process : regulation of catalytic activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007320)
HIX0007320
HIT000308333 (
ENST00000353047
)
(Peptidase C1A family protein.)
genome : 11,700,033 - 11,725,738 (25,706)
query : 1 - 3,875 (3,875/3,875)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007320)
HIX0007320
HIT000198839 (
NM_001908
)
(Peptidase C1A family protein.)
genome : 11,700,033 - 11,725,646 (25,614)
query : 1 - 3,783 (3,783/3,783)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.22.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007320)
HIX0007320
HIT000213428 (
NM_147780
)
(Peptidase C1A family protein.)
genome : 11,700,033 - 11,725,646 (25,614)
query : 1 - 3,945 (3,945/3,945)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.22.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007320)
HIX0007320
HIT000213429 (
NM_147781
)
(Peptidase C1A family protein.)
genome : 11,700,033 - 11,725,646 (25,614)
query : 1 - 3,902 (3,902/3,902)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.22.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007320)
HIX0007320
HIT000213430 (
NM_147782
)
(Peptidase C1A family protein.)
genome : 11,700,033 - 11,725,646 (25,614)
query : 1 - 3,871 (3,871/3,871)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.22.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007320)
HIX0007320
HIT000213431 (
NM_147783
)
(Peptidase C1A family protein.)
genome : 11,700,033 - 11,725,646 (25,614)
query : 1 - 3,857 (3,857/3,857)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.22.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007320)
HIX0007320
HIT000532205 (
ENST00000434271
)
(Peptidase C1A family protein.)
genome : 11,700,033 - 11,725,646 (25,614)
query : 1 - 3,859 (3,859/3,859)
10 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.963)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007320)
HIX0007320
HIT000629784 (
ENST00000530640
)
(Peptidase C1A family protein.)
genome : 11,701,562 - 11,725,621 (24,060)
query : 1 - 1,389 (1,389/1,389)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007320)
HIX0007320
HIT000630226 (
ENST00000531089
)
(Peptidase C1A family protein.)
genome : 11,701,603 - 11,725,621 (24,019)
query : 1 - 1,436 (1,436/1,436)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007320)
HIX0007320
HIT000056412
(
BX647765
)
(Cathepsin B; EC=3.4.22.1; APP secretase; APPS; Cathepsin B1; Contains: Cathepsin B light chain; Contains: Cathepsin B heavy chain; Precursor;)
genome : 11,701,834 - 11,725,549 (23,716)
query : 2 - 1,855 (1,854/1,919)
10 exons
identity = 0.997
3'(0.996;1.000;1.000;1.000;0.988;1.000;1.000;
0.993;1.000;1.000)5'
coverage = 0.999
EC number :
EC 3.4.22.1
InterPro :
IPR000668 : Peptidase C1A, papain C-terminal
IPR013128 : Peptidase C1A
IPR015643 : Peptidase C1A, cathepsin B
IPR025660 : Cysteine peptidase, histidine active site
IPR025661 : Cysteine peptidase, asparagine active site
GO :
0006508 : Biological Process : proteolysis
0008234 : Molecular Function : cysteine-type peptidase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 7.5, cyto_nucl 7.5, cyto 6.5, mito 2,
golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007320)
HIX0007320
HIT000056599
(
BX647952
)
(Cathepsin B; EC=3.4.22.1; APP secretase; APPS; Cathepsin B1; Contains: Cathepsin B light chain; Contains: Cathepsin B heavy chain; Precursor;)
genome : 11,701,828 - 11,725,599 (23,772)
query : 1 - 1,941 (1,941/1,990)
10 exons
identity = 0.994
3'(0.992;1.000;1.000;0.993;1.000;0.992;1.000;
0.988;0.993;1.000)5'
coverage = 1.000
EC number :
EC 3.4.22.1
InterPro :
IPR000169 : Cysteine peptidase, cysteine active site
IPR000668 : Peptidase C1A, papain C-terminal
IPR012599 : Peptidase C1A, propeptide
IPR013128 : Peptidase C1A
IPR015643 : Peptidase C1A, cathepsin B
IPR025660 : Cysteine peptidase, histidine active site
IPR025661 : Cysteine peptidase, asparagine active site
GO :
0004197 : Molecular Function : cysteine-type endopeptidase activity
0006508 : Biological Process : proteolysis
0008234 : Molecular Function : cysteine-type peptidase activity
0050790 : Biological Process : regulation of catalytic activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007320)
HIX0007320
HIT000056886
(
BX648239
)
(Cathepsin B; EC=3.4.22.1; APP secretase; APPS; Cathepsin B1; Contains: Cathepsin B light chain; Contains: Cathepsin B heavy chain; Precursor;)
genome : 11,701,828 - 11,711,909 (10,082)
query : 1 - 7,712 (7,712/7,732)
5 exons
identity = 0.996
3'(0.998;1.000;1.000;0.995;0.995)5'
coverage = 1.000
EC number :
EC 3.4.22.1
InterPro :
IPR000668 : Peptidase C1A, papain C-terminal
IPR013128 : Peptidase C1A
IPR015643 : Peptidase C1A, cathepsin B
GO :
0006508 : Biological Process : proteolysis
0008234 : Molecular Function : cysteine-type peptidase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto_nucl 4.5, mito 4, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007320)
HIX0007320
HIT000034868
(
BC010240
)
(Cathepsin B; EC=3.4.22.1; APP secretase; APPS; Cathepsin B1; Contains: Cathepsin B light chain; Contains: Cathepsin B heavy chain; Precursor;)
genome : 11,701,834 - 11,725,588 (23,755)
query : 1 - 2,012 (2,012/2,029)
11 exons
identity = 0.997
3'(0.996;1.000;1.000;1.000;1.000;0.992;1.000;
0.988;0.993;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.22.1
InterPro :
IPR000169 : Cysteine peptidase, cysteine active site
IPR000668 : Peptidase C1A, papain C-terminal
IPR012599 : Peptidase C1A, propeptide
IPR013128 : Peptidase C1A
IPR015643 : Peptidase C1A, cathepsin B
IPR025660 : Cysteine peptidase, histidine active site
IPR025661 : Cysteine peptidase, asparagine active site
GO :
0004197 : Molecular Function : cysteine-type endopeptidase activity
0006508 : Biological Process : proteolysis
0008234 : Molecular Function : cysteine-type peptidase activity
0050790 : Biological Process : regulation of catalytic activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007320)
HIX0007320
HIT000192286
(
L16510
)
Representative transcript
(Cathepsin B; EC=3.4.22.1; APP secretase; APPS; Cathepsin B1; Contains: Cathepsin B light chain; Contains: Cathepsin B heavy chain; Precursor;)
genome : 11,701,828 - 11,725,573 (23,746)
query : 1 - 1,996 (1,996/1,996)
11 exons
identity = 0.993
3'(0.983;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.22.1
InterPro :
IPR000169 : Cysteine peptidase, cysteine active site
IPR000668 : Peptidase C1A, papain C-terminal
IPR012599 : Peptidase C1A, propeptide
IPR013128 : Peptidase C1A
IPR015643 : Peptidase C1A, cathepsin B
IPR025660 : Cysteine peptidase, histidine active site
IPR025661 : Cysteine peptidase, asparagine active site
GO :
0004197 : Molecular Function : cysteine-type endopeptidase activity
0006508 : Biological Process : proteolysis
0008234 : Molecular Function : cysteine-type peptidase activity
0050790 : Biological Process : regulation of catalytic activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007320)
HIX0007320
HIT000082428
(
AK075393
)
(Cathepsin B; EC=3.4.22.1; APP secretase; APPS; Cathepsin B1; Contains: Cathepsin B light chain; Contains: Cathepsin B heavy chain; Precursor;)
genome : 11,701,829 - 11,725,627 (23,799)
query : 9 - 1,976 (1,968/1,976)
10 exons
identity = 0.996
3'(0.993;1.000;1.000;1.000;1.000;0.992;1.000;
1.000;1.000;1.000)5'
coverage = 0.996
EC number :
EC 3.4.22.1
InterPro :
IPR000169 : Cysteine peptidase, cysteine active site
IPR000668 : Peptidase C1A, papain C-terminal
IPR012599 : Peptidase C1A, propeptide
IPR013128 : Peptidase C1A
IPR015643 : Peptidase C1A, cathepsin B
IPR025660 : Cysteine peptidase, histidine active site
IPR025661 : Cysteine peptidase, asparagine active site
GO :
0004197 : Molecular Function : cysteine-type endopeptidase activity
0006508 : Biological Process : proteolysis
0008234 : Molecular Function : cysteine-type peptidase activity
0050790 : Biological Process : regulation of catalytic activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007320)
HIX0007320
HIT000016937
(
AK092070
)
(Cathepsin B; EC=3.4.22.1; APP secretase; APPS; Cathepsin B1; Contains: Cathepsin B light chain; Contains: Cathepsin B heavy chain; Precursor;)
genome : 11,701,829 - 11,725,596 (23,768)
query : 1 - 2,009 (2,009/2,009)
11 exons
identity = 0.996
3'(0.993;1.000;1.000;1.000;1.000;0.992;1.000;
1.000;0.993;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.22.1
InterPro :
IPR000169 : Cysteine peptidase, cysteine active site
IPR000668 : Peptidase C1A, papain C-terminal
IPR012599 : Peptidase C1A, propeptide
IPR013128 : Peptidase C1A
IPR015643 : Peptidase C1A, cathepsin B
IPR025660 : Cysteine peptidase, histidine active site
IPR025661 : Cysteine peptidase, asparagine active site
GO :
0004197 : Molecular Function : cysteine-type endopeptidase activity
0006508 : Biological Process : proteolysis
0008234 : Molecular Function : cysteine-type peptidase activity
0050790 : Biological Process : regulation of catalytic activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007320)
HIX0007320
HIT000049455
(
AK130184
)
(Cathepsin B; EC=3.4.22.1; APP secretase; APPS; Cathepsin B1; Contains: Cathepsin B light chain; Contains: Cathepsin B heavy chain; Precursor;)
genome : 11,701,829 - 11,725,596 (23,768)
query : 1 - 1,937 (1,937/1,937)
10 exons
identity = 0.998
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.22.1
InterPro :
IPR000169 : Cysteine peptidase, cysteine active site
IPR000668 : Peptidase C1A, papain C-terminal
IPR012599 : Peptidase C1A, propeptide
IPR013128 : Peptidase C1A
IPR015643 : Peptidase C1A, cathepsin B
IPR025660 : Cysteine peptidase, histidine active site
IPR025661 : Cysteine peptidase, asparagine active site
GO :
0004197 : Molecular Function : cysteine-type endopeptidase activity
0006508 : Biological Process : proteolysis
0008234 : Molecular Function : cysteine-type peptidase activity
0050790 : Biological Process : regulation of catalytic activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007320)
HIX0007320
HIT000551461 (
ENST00000453527
)
(Peptidase C1A family protein.)
genome : 11,701,829 - 11,725,596 (23,768)
query : 1 - 2,011 (2,011/2,011)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007320)
HIX0007320
HIT000194314
(
M14221
)
(Cathepsin B; EC=3.4.22.1; APP secretase; APPS; Cathepsin B1; Contains: Cathepsin B light chain; Contains: Cathepsin B heavy chain; Precursor;)
genome : 11,701,829 - 11,725,583 (23,755)
query : 8 - 2,002 (1,995/2,002)
11 exons
identity = 0.983
3'(0.968;1.000;1.000;1.000;1.000;0.983;1.000;
1.000;0.987;0.989;1.000)5'
coverage = 0.997
EC number :
EC 3.4.22.1
InterPro :
IPR000169 : Cysteine peptidase, cysteine active site
IPR000668 : Peptidase C1A, papain C-terminal
IPR012599 : Peptidase C1A, propeptide
IPR013128 : Peptidase C1A
IPR015643 : Peptidase C1A, cathepsin B
IPR025660 : Cysteine peptidase, histidine active site
IPR025661 : Cysteine peptidase, asparagine active site
GO :
0004197 : Molecular Function : cysteine-type endopeptidase activity
0006508 : Biological Process : proteolysis
0008234 : Molecular Function : cysteine-type peptidase activity
0050790 : Biological Process : regulation of catalytic activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007320)
HIX0007320
HIT000630675 (
ENST00000531551
)
(Peptidase C1A family protein.)
genome : 11,701,833 - 11,725,549 (23,717)
query : 1 - 1,855 (1,855/1,855)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007320)
HIX0007320
HIT000513533 (
ENST00000415599
)
(Peptidase C1A family protein.)
genome : 11,701,835 - 11,711,035 (9,201)
query : 1 - 1,772 (1,772/1,772)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007320)
HIX0007320
HIT000137755 (
ENST00000345125
)
(Peptidase C1A family protein.)
genome : 11,701,849 - 11,725,588 (23,740)
query : 1 - 2,028 (2,028/2,028)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007320)
HIX0007320
HIT000632536 (
ENST00000533455
)
(Peptidase C1A family protein.)
genome : 11,701,864 - 11,725,615 (23,752)
query : 1 - 2,009 (2,009/2,009)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007320)
HIX0007320
HIT000633566 (
ENST00000534510
)
(Peptidase C1A family protein.)
genome : 11,701,879 - 11,725,615 (23,737)
query : 1 - 1,989 (1,989/1,989)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007320)
HIX0007320
HIT000491469
(
AK296845
)
(Cathepsin B; EC=3.4.22.1; APP secretase; APPS; Cathepsin B1; Contains: Cathepsin B light chain; Contains: Cathepsin B heavy chain; Precursor;)
genome : 11,702,567 - 11,725,598 (23,032)
query : 1 - 1,003 (1,003/1,003)
9 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.993;1.000)5'
coverage = 1.000
EC number :
EC 3.4.22.1
InterPro :
IPR000169 : Cysteine peptidase, cysteine active site
IPR000668 : Peptidase C1A, papain C-terminal
IPR012599 : Peptidase C1A, propeptide
IPR013128 : Peptidase C1A
IPR015643 : Peptidase C1A, cathepsin B
IPR025660 : Cysteine peptidase, histidine active site
IPR025661 : Cysteine peptidase, asparagine active site
GO :
0004197 : Molecular Function : cysteine-type endopeptidase activity
0006508 : Biological Process : proteolysis
0008234 : Molecular Function : cysteine-type peptidase activity
0050790 : Biological Process : regulation of catalytic activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, lyso 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007320)
HIX0007320
HIT000492311
(
AK297687
)
(Cathepsin B; EC=3.4.22.1; APP secretase; APPS; Cathepsin B1; Contains: Cathepsin B light chain; Contains: Cathepsin B heavy chain; Precursor;)
genome : 11,702,572 - 11,725,596 (23,025)
query : 1 - 958 (958/958)
8 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.991;
1.000)5'
coverage = 1.000
EC number :
EC 3.4.22.1
InterPro :
IPR000668 : Peptidase C1A, papain C-terminal
IPR013128 : Peptidase C1A
IPR015643 : Peptidase C1A, cathepsin B
IPR025660 : Cysteine peptidase, histidine active site
IPR025661 : Cysteine peptidase, asparagine active site
GO :
0006508 : Biological Process : proteolysis
0008234 : Molecular Function : cysteine-type peptidase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 13.3333, cyto 7, extr 6,
cyto_pero 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0007320)
HIX0007320
HIT000423036
(
AK290239
)
(Cathepsin B; EC=3.4.22.1; APP secretase; APPS; Cathepsin B1; Contains: Cathepsin B light chain; Contains: Cathepsin B heavy chain; Precursor;)
genome : 11,702,606 - 11,725,596 (22,991)
query : 1 - 1,160 (1,160/1,160)
10 exons
identity = 0.998
3'(1.000;1.000;0.991;1.000;1.000;0.992;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.22.1
InterPro :
IPR000169 : Cysteine peptidase, cysteine active site
IPR000668 : Peptidase C1A, papain C-terminal
IPR012599 : Peptidase C1A, propeptide
IPR013128 : Peptidase C1A
IPR015643 : Peptidase C1A, cathepsin B
IPR025660 : Cysteine peptidase, histidine active site
IPR025661 : Cysteine peptidase, asparagine active site
GO :
0004197 : Molecular Function : cysteine-type endopeptidase activity
0006508 : Biological Process : proteolysis
0008234 : Molecular Function : cysteine-type peptidase activity
0050790 : Biological Process : regulation of catalytic activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ