bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0167728
HIT000706952_03 (
ENST00000595155
)
(Hypothetical protein.)
genome : 13,601 - 14,029 (429)
query : 1 - 336 (336/336)
2 exons
identity = 0.982
3'(0.979;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 9, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167728)
HIX0167728
HIT000622269_04 (
ENST00000522984
)
(Hypothetical protein.)
genome : 13,798 - 14,035 (238)
query : 1 - 164 (164/164)
2 exons
identity = 0.982
3'(0.977;0.987)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 7.5, cyto_nucl 5.5, mito 5, nucl 2.5,
E.R._mito 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167728)
HIX0167728
HIT000619482_04 (
ENST00000520139
)
(Hypothetical protein.)
genome : 13,801 - 14,030 (230)
query : 1 - 137 (137/137)
2 exons
identity = 0.985
3'(0.988;0.981)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 8, nucl 7, cyto 2, golg 2, cyto_golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167728)
HIX0207842
HIT000639567_02 (
ENST00000540522
)
(Hypothetical protein.)
genome : 19,808 - 36,378 (16,571)
query : 1 - 1,175 (1,175/1,278)
6 exons
identity = 0.993
3'(1.000;0.995;0.997;0.987;0.981;1.000)5'
coverage = 0.919
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207842)
HIX0207842
HIT000679967_01 (
ENST00000566944
)
(Hypothetical protein.)
genome : 20,828 - 36,378 (15,551)
query : 1 - 1,132 (1,132/1,132)
5 exons
identity = 0.974
3'(0.995;0.989;0.952;0.934;0.994)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, plas 5, lyso 4, mito 2, E.R. 2, E.R._mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207842)
HIX0207876
eHIT000022215 ( ESTsASS_7_776 )
Representative transcript
(Non-protein coding transcript.)
genome : 23,988 - 27,231 (3,244)
query : 1 - 303 (303/303)
2 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207876)
ESTs used for assembly :
AA431778
HIX0168007
HIT000466602_06
(
DQ600071
)
Representative transcript
(Non-protein coding transcript.)
genome : 34,618 - 34,646 (29)
query : 1 - 29 (29/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.935
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168007)
HIX0167944
HIT000445003_06
(
DQ578472
)
Representative transcript
(Non-protein coding transcript.)
genome : 35,425 - 35,454 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167944)
HIX0207968
HIT000570441_02 (
ENST00000465755
)
(Hypothetical protein.)
genome : 70,972 - 71,835 (864)
query : 1 - 759 (759/759)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15, cyto 9.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207968)
HIX0208016
HIT000582853_02 (
ENST00000478759
)
(Hypothetical protein.)
genome : 77,038 - 80,418 (3,381)
query : 1 - 605 (605/605)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, cyto 13, nucl 10, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208016)
HIX0187588
pHIT000105273 ( pHIT000105273 )
Representative transcript
(Hypothetical protein.)
genome : 120,404 - 149,145 (28,742)
query : 1 - 423 (423/423)
3 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0187588)
CAGE tag :
T07R0004A3F9
HIX0207830
HIT000567394 (
ENST00000462565
)
(Hypothetical short protein.)
genome : 135,853 - 149,362 (13,510)
query : 1 - 662 (662/662)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, extr 11, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207830)
HIX0207830
HIT000584907 (
ENST00000480919
)
(Hypothetical protein.)
genome : 144,444 - 145,430 (987)
query : 1 - 505 (505/505)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 7, cyto 6.5, cyto_pero 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207830)
HIX0207830
HIT000600599 (
ENST00000497320
)
(Hypothetical short protein.)
genome : 148,328 - 149,466 (1,139)
query : 1 - 429 (429/429)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, extr 5, cyto 4.5, cyto_nucl 4, nucl 2.5,
extr_plas 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207830)
HIX0207830
HIT000591567 (
ENST00000487884
)
(Hypothetical short protein.)
genome : 148,329 - 149,438 (1,110)
query : 1 - 496 (496/496)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, extr 5, cyto 4.5, cyto_nucl 4, nucl 2.5,
extr_plas 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207830)
HIX0006403
HIT000588393 (
ENST00000484550
)
(Conserved hypothetical protein.)
genome : 149,597 - 155,465 (5,869)
query : 1 - 5,008 (5,008/5,008)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, mito 6, cyto 3, cyto_nucl 3, E.R._mito 3,
mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006403)
HIX0006403
HIT000007517
(
AK024243
)
Representative transcript
(Conserved hypothetical protein.)
genome : 149,597 - 154,868 (5,272)
query : 1 - 4,411 (4,411/4,411)
2 exons
identity = 0.998
5'(0.999;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, mito 6, cyto 3, cyto_nucl 3, E.R._mito 3,
mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006403)
HIX0006403
HIT000583648 (
ENST00000479592
)
(Hypothetical short protein.)
genome : 149,731 - 153,490 (3,760)
query : 1 - 591 (591/591)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 11, cyto 9.5, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006403)
HIX0006403
HIT000429012
(
AK310146
)
(Conserved hypothetical protein.)
genome : 149,744 - 154,011 (4,268)
query : 1 - 992 (992/992)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto_nucl 8, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006403)
HIX0006403
HIT000575739 (
ENST00000471299
)
(Hypothetical short protein.)
genome : 149,778 - 153,938 (4,161)
query : 1 - 885 (885/885)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto_nucl 8, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006403)
HIX0006403
HIT000595701 (
ENST00000492208
)
(Hypothetical short protein.)
genome : 152,679 - 153,823 (1,145)
query : 1 - 553 (553/553)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto 9, extr 7, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006403)
HIX0022413
HIT000680540 (
ENST00000567533
)
(Hypothetical protein.)
genome : 161,765 - 164,972 (3,208)
query : 1 - 3,208 (3,208/3,208)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022413)
HIX0022413
HIT000019779
(
AK094924
)
Representative transcript
(Hypothetical protein.)
genome : 161,771 - 164,889 (3,119)
query : 1 - 3,121 (3,121/3,121)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022413)
HIX0187587
HIT000600312 (
ENST00000497017
)
(Hypothetical short protein.)
genome : 174,920 - 176,013 (1,094)
query : 1 - 568 (568/568)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0187587)
HIX0187587
pHIT000105274 ( pHIT000105274 )
Representative transcript
(Hypothetical short protein.)
genome : 175,137 - 189,271 (14,135)
query : 1 - 228 (228/228)
2 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0187587)
CAGE tag :
T07R0004A3F9
HIX0207974
HIT000571672 (
ENST00000467050
)
(Hypothetical short protein.)
genome : 182,935 - 194,180 (11,246)
query : 1 - 574 (574/574)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, mito 6, cyto_nucl 2.33333, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207974)
HIX0019573
HIT000317399 (
NM_020223
)
(Extracellular serine/threonine protein kinase FAM20C; EC=2.7.11.1; Dentin matrix protein 4; DMP-4; Golgi-enriched fraction casein kinase; GEF-CK; Protein FAM20C; Precursor;)
genome : 192,969 - 300,740 (107,772)
query : 1 - 2,780 (2,780/2,787)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 0.997
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R._golg 11, E.R. 10, golg 10, extr 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019573)
HIX0019573
HIT000660464
(
AB545605
)
(Extracellular serine/threonine protein kinase FAM20C; EC=2.7.11.1; Dentin matrix protein 4; DMP-4; Golgi-enriched fraction casein kinase; GEF-CK; Protein FAM20C; Precursor;)
genome : 192,969 - 300,711 (107,743)
query : 1 - 2,751 (2,751/2,768)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.997)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR009581 : Domain of unknown function DUF1193
IPR024869 : FAM20
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R._golg 11, E.R. 10, golg 10, extr 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019573)
HIX0019573
HIT000119877 (
ENST00000313766
)
(Extracellular serine/threonine protein kinase FAM20C; EC=2.7.11.1; Dentin matrix protein 4; DMP-4; Golgi-enriched fraction casein kinase; GEF-CK; Protein FAM20C; Precursor;)
genome : 192,969 - 300,711 (107,743)
query : 1 - 2,751 (2,751/2,751)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R._golg 11, E.R. 10, golg 10, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019573)
HIX0019573
HIT000243735
(
AF533706
)
(Extracellular serine/threonine protein kinase FAM20C; EC=2.7.11.1; Dentin matrix protein 4; DMP-4; Golgi-enriched fraction casein kinase; GEF-CK; Protein FAM20C; Precursor;)
genome : 192,969 - 300,268 (107,300)
query : 1 - 2,308 (2,308/2,326)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.998)3'
coverage = 0.999
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR009581 : Domain of unknown function DUF1193
IPR024869 : FAM20
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R._golg 11, E.R. 10, golg 10, extr 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019573)
HIX0019573
HIT000052316
(
BC040074
)
Representative transcript
(Extracellular serine/threonine protein kinase FAM20C; EC=2.7.11.1; Dentin matrix protein 4; DMP-4; Golgi-enriched fraction casein kinase; GEF-CK; Protein FAM20C; Precursor;)
genome : 193,113 - 300,711 (107,599)
query : 1 - 2,607 (2,607/2,632)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR009581 : Domain of unknown function DUF1193
IPR024869 : FAM20
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R._golg 11, E.R. 10, golg 10, extr 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019573)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK149780
Gallus
sp. (Chicken) : BX932090
Gallus
sp. (Chicken) : BX934255
Oryzias
sp. (Medaka) : ENSORLT00000004059
Oryzias
sp. (Medaka) : ENSORLT00000011849
Rattus
sp. (Rat) : ENSRNOT00000001783
Tetraodon
sp. (Tetraodon) : GSTENT00022474001
Takifugu
sp. (Fugu) : SINFRUT00000140880
Takifugu
sp. (Fugu) : SINFRUT00000141732
Macaca
sp. (Macaque) : XM_001083623
Pan
sp. (Chimpanzee) : XM_001142331
Danio
sp. (Zebrafish) : XM_001332006
Monodelphis
sp. (Opossum) : XM_001378018
Equus
sp. (Horse) : XM_001915339
Canis
sp. (Dog) : XM_548717
Bos
sp. (Cow) : XM_614520
Danio
sp. (Zebrafish) : XM_683800
HIX0019573
HIT000581171 (
ENST00000477004
)
(Extracellular serine/threonine protein kinase FAM20C; EC=2.7.11.1; Dentin matrix protein 4; DMP-4; Golgi-enriched fraction casein kinase; GEF-CK; Protein FAM20C; Precursor;)
genome : 195,242 - 208,976 (13,735)
query : 1 - 344 (344/344)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_mito 10.5, cyto 10, mito 10, cyto_nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019573)
HIX0019573
HIT000575764 (
ENST00000471328
)
(Extracellular serine/threonine protein kinase FAM20C; EC=2.7.11.1; Dentin matrix protein 4; DMP-4; Golgi-enriched fraction casein kinase; GEF-CK; Protein FAM20C; Precursor;)
genome : 195,625 - 197,575 (1,951)
query : 1 - 554 (554/554)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, extr 13, cyto_nucl 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019573)
HIX0019573
HIT000045154
(
AK125281
)
(Conserved hypothetical protein.)
genome : 196,698 - 199,621 (2,924)
query : 1 - 2,924 (2,924/2,924)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 13, extr 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019573)
HIX0019573
HIT000262945
(
BC068086
)
(Conserved hypothetical protein.)
genome : 196,925 - 197,613 (689)
query : 1 - 689 (689/707)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 13, extr 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019573)
HIX0019573
HIT000009414
(
AK026140
)
(Hypothetical short protein.)
genome : 198,636 - 200,680 (2,045)
query : 1 - 2,045 (2,045/2,065)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, mito 10, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019573)
HIX0201265
pHIT000105275 ( pHIT000105275 )
Representative transcript
(Conserved hypothetical protein.)
genome : 223,704 - 283,866 (60,163)
query : 1 - 891 (891/891)
2 exons
InterPro :
IPR016133 : Insect antifreeze protein
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201265)
CAGE tag :
T07F0004AB47
Ortholog candidate ( ->
Evola
)
Takifugu
sp. (Fugu) : SINFRUT00000178352
HIX0021229
HIT000015493
(
AK090626
)
Representative transcript
(Conserved hypothetical protein.)
genome : 227,554 - 229,557 (2,004)
query : 1 - 2,005 (2,005/2,005)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, extr 4, nucl 1.5, cyto_nucl 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021229)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : ENSPTRT00000055651
HIX0021229
HIT000614449 (
ENST00000514988
)
(Conserved hypothetical protein.)
genome : 227,554 - 229,557 (2,004)
query : 1 - 2,004 (2,004/2,004)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021229)
HIX0019573
HIT000026389
(
AL390147
)
(Extracellular serine/threonine protein kinase FAM20C; EC=2.7.11.1; Dentin matrix protein 4; DMP-4; Golgi-enriched fraction casein kinase; GEF-CK; Protein FAM20C; Precursor;)
genome : 285,861 - 300,711 (14,851)
query : 1 - 2,177 (2,177/2,195)
7 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.995)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR009581 : Domain of unknown function DUF1193
IPR024869 : FAM20
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 16, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019573)
HIX0019573
HIT000615201 (
ENST00000515795
)
(Extracellular serine/threonine protein kinase FAM20C; EC=2.7.11.1; Dentin matrix protein 4; DMP-4; Golgi-enriched fraction casein kinase; GEF-CK; Protein FAM20C; Precursor;)
genome : 285,861 - 300,711 (14,851)
query : 1 - 2,177 (2,177/2,177)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 16, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019573)
HIX0019573
HIT000266175
(
BC087853
)
(Extracellular serine/threonine protein kinase FAM20C; EC=2.7.11.1; Dentin matrix protein 4; DMP-4; Golgi-enriched fraction casein kinase; GEF-CK; Protein FAM20C; Precursor;)
genome : 286,396 - 300,709 (14,314)
query : 1 - 1,640 (1,640/1,656)
7 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.995)3'
coverage = 0.999
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR009581 : Domain of unknown function DUF1193
IPR024869 : FAM20
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019573)
HIX0019573
HIT000011318
(
AK054704
)
(Extracellular serine/threonine protein kinase FAM20C; EC=2.7.11.1; Dentin matrix protein 4; DMP-4; Golgi-enriched fraction casein kinase; GEF-CK; Protein FAM20C; Precursor;)
genome : 286,417 - 300,699 (14,283)
query : 1 - 1,609 (1,609/1,609)
7 exons
identity = 0.996
5'(1.000;1.000;0.994;1.000;1.000;1.000;0.995)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR009581 : Domain of unknown function DUF1193
IPR024869 : FAM20
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 14.5, cyto 14.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019573)
HIX0019573
HIT000026379
(
AL390137
)
(Protein FAM20A; Precursor;)
genome : 296,161 - 297,419 (1,259)
query : 1 - 1,018 (1,018/1,018)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR009581 : Domain of unknown function DUF1193
IPR024869 : FAM20
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 9.33333, nucl 8.5, cyto 7,
extr_plas 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019573)
HIX0019573
HIT000612045 (
ENST00000512382
)
(Protein FAM20A; Precursor;)
genome : 296,161 - 297,419 (1,259)
query : 1 - 1,018 (1,018/1,018)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 9.33333, nucl 8.5, cyto 7,
extr_plas 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019573)
HIX0019573
HIT000087307
(
BC009531
)
(Hypothetical protein.)
genome : 300,129 - 300,711 (583)
query : 1 - 583 (583/609)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto 10, cyto_nucl 10, nucl 6, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019573)
HIX0217902
HIT000711744 (
ENST00000599994
)
(Conserved hypothetical protein.)
genome : 302,918 - 304,070 (1,153)
query : 1 - 501 (501/501)
2 exons
identity = 0.965
5'(0.975;0.932)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217902)
HIX0207856
HIT000655981 (
NM_001195127
)
(Transcription factor, fork head domain containing protein.)
genome : 330,136 - 331,454 (1,319)
query : 1 - 702 (702/702)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207856)
HIX0207856
HIT000606447 (
ENST00000506382
)
(Transcription factor, fork head domain containing protein.)
genome : 330,617 - 330,787 (171)
query : 1 - 171 (171/171)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207856)
HIX0207856
HIT000609845 (
ENST00000510017
)
(Conserved hypothetical protein.)
genome : 331,310 - 334,388 (3,079)
query : 1 - 530 (530/530)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, extr 10, cyto_nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207856)
HIX0017710
HIT000013787
(
AK057173
)
Representative transcript
(Conserved hypothetical protein.)
genome : 378,216 - 381,374 (3,159)
query : 1 - 1,679 (1,679/1,679)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 11, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017710)
HIX0018300
HIT000614660 (
ENST00000515213
)
(Conserved hypothetical protein.)
genome : 419,325 - 422,678 (3,354)
query : 1 - 2,146 (2,146/2,146)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 9, cyto_nucl 8.5, extr_plas 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018300)
HIX0018300
HIT000017407
(
AK092540
)
Representative transcript
(Conserved hypothetical protein.)
genome : 419,391 - 422,845 (3,455)
query : 1 - 2,247 (2,247/2,247)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 9, cyto_nucl 8.5, extr_plas 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018300)
HIX0018300
HIT000659117 (
NR_033960
)
(Conserved hypothetical protein.)
genome : 419,391 - 422,845 (3,455)
query : 1 - 2,247 (2,247/2,247)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 9, cyto_nucl 8.5, extr_plas 8.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018300)
HIX0028061
HIT000046507
(
AK126634
)
Representative transcript
(Conserved hypothetical protein.)
genome : 467,033 - 471,673 (4,641)
query : 1 - 4,647 (4,647/4,647)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto 9, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028061)
HIX0168405
HIT000532475 (
ENST00000434541
)
(Hypothetical short protein.)
genome : 523,744 - 535,755 (12,012)
query : 1 - 420 (420/420)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168405)
HIX0188512
pHIT000012491 ( pHIT000012491 )
Representative transcript
(Hypothetical protein.)
genome : 524,679 - 525,715 (1,037)
query : 1 - 243 (243/243)
2 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0188512)
CAGE tag :
H40BB12D1007
HIX0042124
HIT000366833 (
NM_002607
)
(Platelet-derived growth factor subunit A; PDGF subunit A; PDGF-1; Platelet-derived growth factor A chain; Platelet-derived growth factor alpha polypeptide; Precursor;)
genome : 536,895 - 559,481 (22,587)
query : 1 - 2,809 (2,809/2,809)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0042124)
HIX0042124
HIT000366916 (
NM_033023
)
(Platelet-derived growth factor subunit A; PDGF subunit A; PDGF-1; Platelet-derived growth factor A chain; Platelet-derived growth factor alpha polypeptide; Precursor;)
genome : 536,895 - 559,481 (22,587)
query : 1 - 2,740 (2,740/2,740)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0042124)
HIX0042124
HIT000504263 (
ENST00000402802
)
(Platelet-derived growth factor subunit A; PDGF subunit A; PDGF-1; Platelet-derived growth factor A chain; Platelet-derived growth factor alpha polypeptide; Precursor;)
genome : 536,895 - 559,046 (22,152)
query : 1 - 2,305 (2,305/2,305)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0042124)
HIX0042124
HIT000321182
(
X06374
)
(Platelet-derived growth factor subunit A; PDGF subunit A; PDGF-1; Platelet-derived growth factor A chain; Platelet-derived growth factor alpha polypeptide; Precursor;)
genome : 536,899 - 559,046 (22,148)
query : 1 - 2,305 (2,305/2,305)
6 exons
identity = 0.988
3'(0.986;1.000;1.000;0.990;1.000;0.985)5'
coverage = 1.000
InterPro :
IPR000072 : PDGF/VEGF domain
IPR006782 : Platelet-derived growth factor, N-terminal
IPR023581 : Platelet-derived growth factor, conserved site
IPR029034 : Cystine-knot cytokine
GO :
0008083 : Molecular Function : growth factor activity
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0042124)
HIX0042124
HIT000321002
(
X03795
)
Representative transcript
(Platelet-derived growth factor subunit A; PDGF subunit A; PDGF-1; Platelet-derived growth factor A chain; Platelet-derived growth factor alpha polypeptide; Precursor;)
genome : 537,946 - 559,031 (21,086)
query : 1 - 1,301 (1,301/1,308)
7 exons
identity = 0.987
3'(0.985;1.000;1.000;1.000;1.000;1.000;0.971)5'
coverage = 0.995
InterPro :
IPR000072 : PDGF/VEGF domain
IPR006782 : Platelet-derived growth factor, N-terminal
IPR023581 : Platelet-derived growth factor, conserved site
IPR029034 : Cystine-knot cytokine
GO :
0008083 : Molecular Function : growth factor activity
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0042124)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AB031022
Mus
sp. (Mouse) : AY324648
Canis
sp. (Dog) : AY855209
Danio
sp. (Zebrafish) : BC078289
Bos
sp. (Cow) : BC105569
Danio
sp. (Zebrafish) : BC124288
Oryzias
sp. (Medaka) : ENSORLT00000010620
Oryzias
sp. (Medaka) : ENSORLT00000013045
Pongo
sp. (Orangutan) : ENSPPYT00000020139
Tetraodon
sp. (Tetraodon) : GSTENT00033366001
Tetraodon
sp. (Tetraodon) : GSTENT00034853001
Takifugu
sp. (Fugu) : SINFRUT00000182899
Macaca
sp. (Macaque) : XM_001096150
Monodelphis
sp. (Opossum) : XM_001367261
Pan
sp. (Chimpanzee) : XR_020393
Rattus
sp. (Rat) : Z14120
HIX0042124
HIT000308792 (
ENST00000354513
)
(Platelet-derived growth factor subunit A; PDGF subunit A; PDGF-1; Platelet-derived growth factor A chain; Platelet-derived growth factor alpha polypeptide; Precursor;)
genome : 537,946 - 559,031 (21,086)
query : 1 - 1,308 (1,308/1,308)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0042124)
HIX0042124
HIT000425014
(
AK292217
)
(Platelet-derived growth factor subunit A; PDGF subunit A; PDGF-1; Platelet-derived growth factor A chain; Platelet-derived growth factor alpha polypeptide; Precursor;)
genome : 538,025 - 558,852 (20,828)
query : 1 - 1,050 (1,050/1,050)
7 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.990;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000072 : PDGF/VEGF domain
IPR006782 : Platelet-derived growth factor, N-terminal
IPR023581 : Platelet-derived growth factor, conserved site
IPR029034 : Cystine-knot cytokine
GO :
0008083 : Molecular Function : growth factor activity
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0042124)
HIX0042124
HIT000483670 (
ENST00000400761
)
(Platelet-derived growth factor subunit A; PDGF subunit A; PDGF-1; Platelet-derived growth factor A chain; Platelet-derived growth factor alpha polypeptide; Precursor;)
genome : 538,130 - 558,145 (20,016)
query : 1 - 689 (689/689)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito_nucl 14.1667, nucl 14, mito 12.5,
cyto_nucl 11.3333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0042124)
HIX0042124
HIT000022313_03
(
AK097459
)
(Platelet-derived growth factor subunit A; PDGF subunit A; PDGF-1; Platelet-derived growth factor A chain; Platelet-derived growth factor alpha polypeptide; Precursor;)
genome : 539,540 - 541,423 (1,884)
query : 1 - 1,742 (1,742/1,742)
2 exons
identity = 0.994
3'(1.000;0.991)5'
coverage = 1.000
InterPro :
IPR029034 : Cystine-knot cytokine
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 6, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0042124)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : ENSMMUT00000006975
Pongo
sp. (Orangutan) : ENSPPYT00000020138
HIX0042124
HIT000339345
(
BC109246
)
(Platelet-derived growth factor subunit A; PDGF subunit A; PDGF-1; Platelet-derived growth factor A chain; Platelet-derived growth factor alpha polypeptide; Precursor;)
genome : 540,415 - 553,104 (12,690)
query : 14 - 1,782 (1,769/1,792)
3 exons
identity = 0.998
3'(0.996;1.000;0.998)5'
coverage = 0.987
InterPro :
IPR000072 : PDGF/VEGF domain
IPR006782 : Platelet-derived growth factor, N-terminal
IPR023581 : Platelet-derived growth factor, conserved site
IPR029034 : Cystine-knot cytokine
GO :
0008083 : Molecular Function : growth factor activity
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0042124)
HIX0042124
HIT000586391 (
ENST00000482462
)
(Platelet-derived growth factor subunit A; PDGF subunit A; PDGF-1; Platelet-derived growth factor A chain; Platelet-derived growth factor alpha polypeptide; Precursor;)
genome : 540,415 - 553,104 (12,690)
query : 1 - 1,770 (1,770/1,770)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0042124)
HIX0042124
HIT000487522
(
AB451309
)
(Platelet-derived growth factor subunit A; PDGF subunit A; PDGF-1; Platelet-derived growth factor A chain; Platelet-derived growth factor alpha polypeptide; Precursor;)
genome : 540,745 - 558,638 (17,894)
query : 1 - 588 (588/591)
5 exons
identity = 0.995
3'(0.978;1.000;1.000;1.000;1.000)5'
coverage = 0.995
InterPro :
IPR000072 : PDGF/VEGF domain
IPR006782 : Platelet-derived growth factor, N-terminal
IPR023581 : Platelet-derived growth factor, conserved site
IPR029034 : Cystine-knot cytokine
GO :
0008083 : Molecular Function : growth factor activity
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0042124)
HIX0042124
HIT000487652
(
AB451439
)
(Platelet-derived growth factor subunit A; PDGF subunit A; PDGF-1; Platelet-derived growth factor A chain; Platelet-derived growth factor alpha polypeptide; Precursor;)
genome : 540,745 - 558,638 (17,894)
query : 1 - 588 (588/588)
5 exons
identity = 0.995
3'(0.978;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000072 : PDGF/VEGF domain
IPR006782 : Platelet-derived growth factor, N-terminal
IPR023581 : Platelet-derived growth factor, conserved site
IPR029034 : Cystine-knot cytokine
GO :
0008083 : Molecular Function : growth factor activity
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0042124)
HIX0042124
HIT000505323 (
ENST00000405692
)
(Platelet-derived growth factor subunit A; PDGF subunit A; PDGF-1; Platelet-derived growth factor A chain; Platelet-derived growth factor alpha polypeptide; Precursor;)
genome : 551,994 - 559,933 (7,940)
query : 1 - 663 (663/663)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0042124)
HIX0042124
HIT000524615 (
ENST00000426681
)
(Conserved hypothetical protein.)
genome : 557,030 - 559,845 (2,816)
query : 1 - 347 (347/357)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.972
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, nucl 11.5, extr 10, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0042124)
HIX0025533
HIT000046348
(
AK126475
)
Representative transcript
(Conserved hypothetical protein.)
genome : 560,028 - 564,869 (4,842)
query : 1 - 3,507 (3,507/3,507)
3 exons
identity = 0.999
5'(0.999;0.995;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 8, cyto_nucl 7.5, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025533)
HIX0025533
HIT000550556 (
ENST00000452622
)
(Conserved hypothetical protein.)
genome : 560,028 - 564,869 (4,842)
query : 1 - 3,506 (3,506/3,506)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 8, cyto_nucl 7.5, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025533)
HIX0025533
HIT000659120 (
NR_033963
)
(Conserved hypothetical protein.)
genome : 560,028 - 564,869 (4,842)
query : 1 - 3,506 (3,506/3,506)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 8, cyto_nucl 7.5, cyto 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025533)
HIX0217548
HIT000023652
(
AK098822
)
Representative transcript
(CAMP-dependent protein kinase type I-beta regulatory subunit.)
genome : 589,885 - 731,428 (141,544)
query : 1 - 1,403 (1,403/1,403)
10 exons
identity = 0.999
3'(1.000;1.000;0.992;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000595 : Cyclic nucleotide-binding domain
IPR002373 : cAMP/cGMP-dependent protein kinase
IPR014710 : RmlC-like jelly roll fold
IPR018488 : Cyclic nucleotide-binding, conserved site
IPR018490 : Cyclic nucleotide-binding-like
GO :
0001932 : Biological Process : regulation of protein phosphorylation
0005952 : Cellular Component : cAMP-dependent protein kinase complex
0008603 : Molecular Function : cAMP-dependent protein kinase regulator activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 10.5, cyto_mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217548)
HIX0217548
HIT000483667_03 (
ENST00000400758
)
(cAMP/cGMP-dependent protein kinase family protein.)
genome : 589,907 - 642,320 (52,414)
query : 1 - 888 (888/888)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28.5, mito_pero 15
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217548)
HIX0168704
HIT000551083 (
ENST00000453149
)
(Hypothetical protein.)
genome : 601,595 - 605,256 (3,662)
query : 1 - 572 (572/572)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 4.5, cyto_pero 4.5, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168704)
HIX0217548
HIT000264352
(
BC070478
)
(CAMP-dependent protein kinase type I-beta regulatory subunit.)
genome : 618,336 - 641,221 (22,886)
query : 15 - 643 (629/657)
5 exons
identity = 0.998
3'(1.000;0.992;1.000;1.000;1.000)5'
coverage = 0.978
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000595 : Cyclic nucleotide-binding domain
IPR014710 : RmlC-like jelly roll fold
IPR018488 : Cyclic nucleotide-binding, conserved site
IPR018490 : Cyclic nucleotide-binding-like
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 16, nucl 5.5, mito 2, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217548)
HIX0217548
HIT000512502 (
ENST00000414568
)
(cAMP/cGMP-dependent protein kinase family protein.)
genome : 635,817 - 731,431 (95,615)
query : 1 - 752 (752/752)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, nucl 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217548)
HIX0168336
HIT000527806 (
ENST00000429872
)
(Hypothetical protein.)
genome : 642,822 - 648,119 (5,298)
query : 1 - 731 (731/731)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 15, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168336)
HIX0217847
HIT000592123 (
ENST00000488474
)
(Dimerization-anchoring domain of cAMP-dependent protein kinase, regulatory subunit containing protein.)
genome : 736,350 - 766,874 (30,525)
query : 1 - 617 (617/617)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 7.5, cyto_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217847)
HIX0025532
HIT000044026
(
AK124153
)
Representative transcript
(Conserved hypothetical protein.)
genome : 746,079 - 748,292 (2,214)
query : 1 - 2,215 (2,215/2,215)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 10.5, mito 10, cyto 5, E.R._mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025532)
HIX0208013
HIT000582313 (
ENST00000478198
)
(Hypothetical short protein.)
genome : 756,256 - 766,614 (10,359)
query : 1 - 602 (602/602)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 4, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0208013)
HIX0006405
HIT000119630 (
ENST00000313147
)
(HEAT repeat-containing protein 2;)
genome : 766,338 - 829,190 (62,853)
query : 1 - 2,552 (2,552/2,552)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30.5, extr_plas 16
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006405)
HIX0006405
HIT000053097
(
BC047240
)
Representative transcript
(HEAT repeat-containing protein 2;)
genome : 766,338 - 826,111 (59,774)
query : 1 - 3,409 (3,409/3,507)
13 exons
identity = 0.997
5'(0.993;1.000;1.000;1.000;1.000;0.991;1.000;
1.000;1.000;1.000;1.000;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR000357 : HEAT
IPR011989 : Armadillo-like helical
IPR021133 : HEAT, type 2
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006405)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC053401
Rattus
sp. (Rat) : BC105840
Gallus
sp. (Chicken) : BX936040
Oryzias
sp. (Medaka) : ENSORLT00000010520
Pongo
sp. (Orangutan) : ENSPPYT00000020140
Pan
sp. (Chimpanzee) : ENSPTRT00000034781
Takifugu
sp. (Fugu) : SINFRUT00000134738
Macaca
sp. (Macaque) : XM_001097048
Monodelphis
sp. (Opossum) : XM_001378130
Equus
sp. (Horse) : XM_001489007
Canis
sp. (Dog) : XM_548719
HIX0006405
HIT000206665 (
NM_017802
)
(HEAT repeat-containing protein 2;)
genome : 766,338 - 826,116 (59,779)
query : 1 - 3,414 (3,414/3,424)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006405)
HIX0006405
HIT000727738 (
NR_075098
)
(HEAT repeat-containing protein 2;)
genome : 766,338 - 826,116 (59,779)
query : 1 - 3,352 (3,352/3,362)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 8, plas 6, mito 6, cyto_nucl 6, cyto 4, E.R. 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006405)
HIX0006405
HIT000114808 (
ENST00000297440
)
(HEAT repeat-containing protein 2;)
genome : 766,338 - 826,112 (59,775)
query : 1 - 3,410 (3,410/3,410)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006405)
HIX0006405
HIT000535353 (
ENST00000437419
)
(HEAT repeat-containing protein 2;)
genome : 766,856 - 794,461 (27,606)
query : 1 - 578 (578/585)
4 exons
identity = 0.998
5'(1.000;1.000;1.000;0.996)3'
coverage = 0.988
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20.5, cyto_mito 13.5, cyto_nucl 6.83333,
nucl 5.5, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006405)
HIX0006405
HIT000536895 (
ENST00000438961
)
(HEAT repeat-containing protein 2;)
genome : 766,889 - 790,590 (23,702)
query : 1 - 579 (579/579)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 12, mito 7, nucl 6.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006405)
HIX0006405
HIT000012847
(
AK056233
)
(HEAT repeat-containing protein 2;)
genome : 766,892 - 825,668 (58,777)
query : 2 - 2,351 (2,350/2,351)
13 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.993;
1.000;1.000;1.000;0.994;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000357 : HEAT
IPR011989 : Armadillo-like helical
IPR021133 : HEAT, type 2
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 7, extr 7, extr_plas 7, mito 6, cyto_plas 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006405)
HIX0006405
HIT000538681 (
ENST00000440747
)
(HEAT repeat-containing protein 2;)
genome : 766,892 - 825,668 (58,777)
query : 1 - 2,350 (2,350/2,350)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 12.5, mito 10, cyto_nucl 9, cyto 4.5, plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006405)
HIX0006405
HIT000021555
(
AK096700
)
(HEAT repeat-containing protein 2;)
genome : 772,077 - 825,668 (53,592)
query : 1 - 2,313 (2,313/2,313)
12 exons
identity = 0.994
5'(0.974;0.960;1.000;1.000;1.000;1.000;1.000;
0.986;1.000;0.994;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR000357 : HEAT
IPR011989 : Armadillo-like helical
IPR021133 : HEAT, type 2
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18, plas 4, cyto 3, nucl 2, pero 2, lyso 2,
cyto_mito 2, cysk_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006405)
HIX0006405
HIT000035070
(
BC010850
)
(HEAT repeat-containing protein 2;)
genome : 796,420 - 829,193 (32,774)
query : 6 - 1,282 (1,277/1,296)
8 exons
identity = 0.998
5'(0.991;1.000;1.000;1.000;1.000;0.994;1.000;
1.000)3'
coverage = 0.996
InterPro :
IPR000357 : HEAT
IPR011989 : Armadillo-like helical
IPR021133 : HEAT, type 2
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 9, mito 6, extr 5, cyto 5, nucl 3, lyso 3,
E.R._mito 3, cyto_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006405)
HIX0006405
HIT000023260
(
AK098430
)
(HEAT repeat-containing protein 2;)
genome : 801,390 - 826,110 (24,721)
query : 11 - 1,928 (1,918/1,928)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 0.995
InterPro :
IPR000357 : HEAT
IPR011989 : Armadillo-like helical
IPR021133 : HEAT, type 2
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, E.R. 5, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006405)
HIX0006405
HIT000264870
(
BC072425
)
(HEAT repeat-containing protein 2;)
genome : 803,544 - 812,598 (9,055)
query : 1 - 2,559 (2,559/2,573)
2 exons
identity = 0.998
5'(1.000;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 11.5, extr 10, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006405)
HIX0006405
HIT000595020 (
ENST00000491496
)
(HEAT repeat-containing protein 2;)
genome : 803,544 - 812,598 (9,055)
query : 1 - 2,559 (2,559/2,573)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 11.5, extr 10, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006405)
HIX0033755
HIT000066993
(
AF086114
)
Representative transcript
(Conserved hypothetical protein.)
genome : 806,455 - 806,876 (422)
query : 1 - 422 (422/431)
1 exon
identity = 0.988
5'(0.988)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto 12, extr 3, nucl 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033755)
HIX0006405
HIT000002879
(
AK000404
)
(HEAT repeat-containing protein 2;)
genome : 807,450 - 826,111 (18,662)
query : 1 - 1,906 (1,906/1,922)
6 exons
identity = 0.995
5'(0.987;1.000;1.000;0.994;1.000;0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 13, nucl 9, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006405)
HIX0006405
HIT000384637
(
AK225507
)
(HEAT repeat-containing protein 2;)
genome : 807,450 - 826,111 (18,662)
query : 1 - 1,906 (1,906/1,922)
6 exons
identity = 0.995
5'(0.987;1.000;1.000;0.994;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR000357 : HEAT
IPR011989 : Armadillo-like helical
IPR021133 : HEAT, type 2
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 13, nucl 9, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006405)
HIX0006405
HIT000504668 (
ENST00000403952
)
(HEAT repeat-containing protein 2;)
genome : 808,112 - 825,681 (17,570)
query : 1 - 1,907 (1,907/1,907)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 14, nucl 6, extr 5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006405)
HIX0006405
HIT000011209
(
AK054595
)
(HEAT repeat-containing protein 2;)
genome : 808,112 - 825,668 (17,557)
query : 1 - 1,894 (1,894/1,894)
6 exons
identity = 0.995
5'(0.990;0.993;1.000;0.994;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR000357 : HEAT
IPR011989 : Armadillo-like helical
IPR021133 : HEAT, type 2
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18, cyto 16, nucl 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006405)
HIX0006405
HIT000335141
(
BC094840
)
(HEAT repeat-containing protein 2;)
genome : 808,284 - 825,669 (17,386)
query : 1 - 1,723 (1,723/1,740)
6 exons
identity = 0.998
5'(0.996;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR000357 : HEAT
IPR011989 : Armadillo-like helical
IPR021133 : HEAT, type 2
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 14, nucl 6, extr 5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006405)
HIX0006405
HIT000027826
(
AL832914
)
(HEAT repeat-containing protein 2;)
genome : 813,737 - 826,111 (12,375)
query : 1 - 1,406 (1,406/1,418)
4 exons
identity = 0.997
5'(1.000;0.994;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR000357 : HEAT
IPR011989 : Armadillo-like helical
IPR021133 : HEAT, type 2
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19.5, mito_pero 10.5, extr 7, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006405)
HIX0123895
HIT000452036
(
DQ585505
)
Representative transcript
(Non-protein coding transcript.)
genome : 816,918 - 816,947 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0123895)
HIX0006405
HIT000590294 (
ENST00000486546
)
(Hypothetical short protein.)
genome : 817,819 - 819,621 (1,803)
query : 1 - 536 (536/536)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 6, nucl 2, mito 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006405)
HIX0006405
HIT000566451 (
ENST00000461576
)
(HEAT repeat-containing protein 2;)
genome : 819,541 - 825,210 (5,670)
query : 1 - 298 (298/298)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, nucl 4.5, cyto_nucl 3.66667,
cyto_pero 2.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006405)
HIX0006405
HIT000047563
(
AK127690
)
(HEAT repeat-containing protein 2;)
genome : 821,353 - 848,746 (27,394)
query : 3 - 2,438 (2,436/2,438)
5 exons
identity = 0.994
5'(0.993;0.996;0.997;1.000;0.993)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006405)
HIX0006405
HIT000045352
(
AK125479
)
(HEAT repeat-containing protein 2;)
genome : 822,117 - 825,690 (3,574)
query : 1 - 3,519 (3,519/3,519)
2 exons
identity = 0.993
5'(0.994;0.993)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 12, lyso 2, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006405)
HIX0217570
HIT000654859 (
NM_001171946
)
(SUN domain-containing protein 1; Protein unc-84 homolog A; Sad1/unc-84 protein-like 1;)
genome : 855,194 - 883,509 (28,316)
query : 1 - 1,077 (1,077/1,077)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto 9, extr 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217570)
HIX0217570
HIT000036306
(
BC013613
)
(SUN domain-containing protein 1 isoform e.)
genome : 855,194 - 883,455 (28,262)
query : 1 - 1,023 (1,023/1,068)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR018539 : SUN domain-containing protein 1
GO :
0005639 : Cellular Component : integral component of nuclear inner membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto 9, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217570)
HIX0217570
HIT000555312 (
ENST00000457378
)
(SUN domain-containing protein 1; Protein unc-84 homolog A; Sad1/unc-84 protein-like 1;)
genome : 856,252 - 883,509 (27,258)
query : 1 - 1,309 (1,309/1,309)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10, cyto_nucl 7.16667, nucl 6.5, cyto 6.5,
cyto_pero 5.33333, extr 5, E.R._mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217570)
HIX0217570
HIT000654858 (
NM_001171945
)
(SUN domain-containing protein 1; Protein unc-84 homolog A; Sad1/unc-84 protein-like 1;)
genome : 856,252 - 883,509 (27,258)
query : 1 - 1,309 (1,309/1,309)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10, cyto_nucl 7.16667, nucl 6.5, cyto 6.5,
cyto_pero 5.33333, extr 5, E.R._mito 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217570)
HIX0217570
HIT000548472 (
ENST00000450538
)
(SUN domain-containing protein 1; Protein unc-84 homolog A; Sad1/unc-84 protein-like 1;)
genome : 856,252 - 882,643 (26,392)
query : 1 - 570 (570/570)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 13, extr 8, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217570)
HIX0217570
HIT000525903 (
ENST00000427969
)
(SUN domain-containing protein 1; Protein unc-84 homolog A; Sad1/unc-84 protein-like 1;)
genome : 856,252 - 882,205 (25,954)
query : 1 - 520 (520/520)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, mito 11, extr 4, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217570)
HIX0217570
HIT000533633 (
ENST00000435699
)
(SUN domain-containing protein 1; Protein unc-84 homolog A; Sad1/unc-84 protein-like 1;)
genome : 856,260 - 883,022 (26,763)
query : 1 - 676 (676/676)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 13.5, extr 6, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217570)
HIX0217570
HIT000427986
(
AK309120
)
Representative transcript
(SUN domain-containing protein 1; Protein unc-84 homolog A; Sad1/unc-84 protein-like 1;)
genome : 856,280 - 883,509 (27,230)
query : 1 - 1,281 (1,281/1,281)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR018539 : SUN domain-containing protein 1
GO :
0005639 : Cellular Component : integral component of nuclear inner membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10, cyto_nucl 7.16667, nucl 6.5, cyto 6.5,
cyto_pero 5.33333, extr 5, E.R._mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217570)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB072783
Mus
sp. (Mouse) : BC048156
Rattus
sp. (Rat) : BC085844
Danio
sp. (Zebrafish) : BC122107
Gallus
sp. (Chicken) : CR406348
Pongo
sp. (Orangutan) : CR861408
Equus
sp. (Horse) : ENSECAT00000018761
Oryzias
sp. (Medaka) : ENSORLT00000010709
Tetraodon
sp. (Tetraodon) : GSTENT00033370001
Takifugu
sp. (Fugu) : SINFRUT00000134731
Pan
sp. (Chimpanzee) : XM_001144186
Monodelphis
sp. (Opossum) : XM_001367406
Canis
sp. (Dog) : XM_850781
HIX0217570
HIT000538314 (
ENST00000440380
)
(SUN domain-containing protein 1; Protein unc-84 homolog A; Sad1/unc-84 protein-like 1;)
genome : 856,280 - 878,623 (22,344)
query : 1 - 537 (537/537)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 8.16667, nucl 7, mito 7, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217570)
HIX0217570
HIT000537613 (
ENST00000439679
)
(SUN domain-containing protein 1; Protein unc-84 homolog A; Sad1/unc-84 protein-like 1;)
genome : 856,392 - 881,723 (25,332)
query : 1 - 626 (626/626)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 13, extr 7, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217570)
HIX0217570
HIT000522062 (
ENST00000424128
)
(SUN domain-containing protein 1; Protein unc-84 homolog A; Sad1/unc-84 protein-like 1;)
genome : 856,503 - 878,623 (22,121)
query : 1 - 633 (633/633)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, extr 10, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217570)
HIX0217570
HIT000555532 (
ENST00000457598
)
(SUN domain-containing protein 1; Protein unc-84 homolog A; Sad1/unc-84 protein-like 1;)
genome : 870,567 - 881,672 (11,106)
query : 1 - 563 (563/563)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 12, extr 9, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217570)
HIX0217570
HIT000519514 (
ENST00000421580
)
(SUN domain-containing protein 1; Protein unc-84 homolog A; Sad1/unc-84 protein-like 1;)
genome : 871,559 - 881,656 (10,098)
query : 1 - 540 (540/540)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 11.5, extr 10, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217570)
HIX0217570
HIT000504641 (
ENST00000403868
)
(SUN domain-containing protein 1; Protein unc-84 homolog A; Sad1/unc-84 protein-like 1;)
genome : 872,140 - 883,455 (11,316)
query : 1 - 978 (978/978)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto 9, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217570)
HIX0217570
HIT000572092 (
ENST00000467483
)
(SUN domain-containing protein 1; Protein unc-84 homolog A; Sad1/unc-84 protein-like 1;)
genome : 872,142 - 883,471 (11,330)
query : 1 - 992 (992/992)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto 9, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217570)
HIX0217570
HIT000587863 (
ENST00000483996
)
(SUN domain-containing protein 1; Protein unc-84 homolog A; Sad1/unc-84 protein-like 1;)
genome : 872,144 - 878,817 (6,674)
query : 1 - 478 (478/478)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, extr 10, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217570)
HIX0217570
HIT000574263 (
ENST00000469755
)
(SUN domain-containing protein 1 isoform b.)
genome : 872,592 - 881,710 (9,119)
query : 1 - 592 (592/592)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 13.5, extr 7, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217570)
HIX0217570
HIT000597110 (
ENST00000493681
)
(SUN domain-containing protein 1; Protein unc-84 homolog A; Sad1/unc-84 protein-like 1;)
genome : 881,453 - 883,158 (1,706)
query : 1 - 523 (523/526)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217570)
HIX0217570
HIT000582074 (
ENST00000477950
)
(SUN domain-containing protein 1; Protein unc-84 homolog A; Sad1/unc-84 protein-like 1;)
genome : 881,549 - 883,306 (1,758)
query : 1 - 575 (575/575)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 14.5, mito_pero 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217570)
HIX0217570
HIT000575784 (
ENST00000471349
)
(SUN domain-containing protein 1; Protein unc-84 homolog A; Sad1/unc-84 protein-like 1;)
genome : 882,558 - 888,131 (5,574)
query : 1 - 569 (569/569)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217570)
HIX0201225
HIT000045985
(
AK126112
)
Representative transcript
(Conserved hypothetical protein.)
genome : 883,630 - 886,641 (3,012)
query : 1 - 3,013 (3,013/3,013)
1 exon
identity = 0.992
5'(0.992)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, mito 4, cyto 2.5, cyto_pero 2.5,
mito_nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201225)
HIX0033846
HIT000048936
(
AK129665
)
Representative transcript
(Conserved hypothetical protein.)
genome : 884,872 - 886,641 (1,770)
query : 1 - 1,771 (1,771/1,771)
1 exon
identity = 0.993
3'(0.993)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 5.5, cyto_nucl 5, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033846)
HIX0167829
HIT000018717
(
AK093851
)
Representative transcript
(Conserved hypothetical protein.)
genome : 888,263 - 890,404 (2,142)
query : 1 - 2,142 (2,142/2,142)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167829)
HIX0217532
HIT000592268 (
ENST00000488628
)
(SUN domain-containing protein 1 family protein.)
genome : 890,804 - 892,461 (1,658)
query : 1 - 626 (626/626)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 20.5, cyto_mito 12, plas 4, cyto 2.5,
extr_plas 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217532)
HIX0217532
HIT000568624 (
ENST00000463848
)
(SUN domain-containing protein 1 family protein.)
genome : 891,187 - 892,410 (1,224)
query : 1 - 659 (659/659)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, cyto 3, mito 3, E.R._mito 2.33333,
mito_pero 2.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217532)
HIX0217532
HIT000564766 (
ENST00000459810
)
(Conserved hypothetical protein.)
genome : 891,829 - 892,539 (711)
query : 1 - 569 (569/569)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217532)
HIX0217532
HIT000055412
(
BX640866
)
Representative transcript
(SUN domain containing protein.)
genome : 891,884 - 914,539 (22,656)
query : 1 - 4,038 (4,038/4,059)
10 exons
identity = 0.999
5'(0.998;1.000;1.000;0.992;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR012919 : SUN domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, nucl 12.5, cyto 12.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217532)
HIX0217532
HIT000057540
(
BX648893
)
(SUN domain containing protein.)
genome : 891,884 - 914,539 (22,656)
query : 1 - 4,038 (4,038/4,057)
10 exons
identity = 0.999
5'(0.998;1.000;1.000;0.992;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR012919 : SUN domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, nucl 12.5, cyto 12.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217532)
HIX0217532
HIT000580188 (
ENST00000475971
)
(SUN domain containing protein.)
genome : 891,884 - 914,539 (22,656)
query : 1 - 4,038 (4,038/4,038)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 14, cyto 12.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217532)
HIX0217532
HIT000073793
(
AF202724
)
(SUN domain containing protein.)
genome : 893,074 - 912,968 (19,895)
query : 1 - 1,277 (1,277/1,277)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR012919 : SUN domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 16, cyto 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217532)
HIX0217532
HIT000015100
(
AK074320
)
(SUN domain containing protein.)
genome : 899,774 - 914,539 (14,766)
query : 1 - 2,397 (2,397/2,427)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR012919 : SUN domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 18.5, cyto 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217532)
HIX0217532
HIT000257679
(
AY776160
)
(SUN domain containing protein.)
genome : 905,617 - 914,467 (8,851)
query : 1 - 1,962 (1,962/1,962)
4 exons
identity = 0.998
5'(1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR012919 : SUN domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 10.5, mito 9, extr 4, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217532)
HIX0217532
HIT000601191 (
ENST00000497943
)
(SUN domain containing protein.)
genome : 908,111 - 914,539 (6,429)
query : 1 - 2,824 (2,824/2,824)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 10, cyto_pero 9.33333, mito 8,
extr 5, nucl 4, E.R._mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217532)
HIX0217532
HIT000340610
(
BC113916
)
(Hypothetical short protein.)
genome : 913,625 - 913,930 (306)
query : 5 - 310 (306/310)
1 exon
identity = 0.987
5'(0.987)3'
coverage = 0.987
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217532)
HIX0201122
HIT000109872 (
ENST00000265857
)
(Golgi to ER traffic protein 4 homolog; Conserved edge-expressed protein; Transmembrane domain recognition complex 35 kDa subunit; TRC35;)
genome : 916,189 - 936,071 (19,883)
query : 1 - 2,090 (2,090/2,090)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 9, nucl 8, plas 4.5, mito 4, extr_plas 4,
extr 2.5, pero 2, golg 2, E.R._mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201122)
HIX0201122
HIT000205736 (
NM_015949
)
(Golgi to ER traffic protein 4 homolog; Conserved edge-expressed protein; Transmembrane domain recognition complex 35 kDa subunit; TRC35;)
genome : 916,191 - 936,071 (19,881)
query : 1 - 2,088 (2,088/2,106)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 9, nucl 8, plas 4.5, mito 4, extr_plas 4,
extr 2.5, pero 2, golg 2, E.R._mito 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201122)
HIX0201122
HIT000031588
(
BC003550
)
Representative transcript
(Golgi to ER traffic protein 4 homolog; Conserved edge-expressed protein; Transmembrane domain recognition complex 35 kDa subunit; TRC35;)
genome : 916,249 - 935,326 (19,078)
query : 1 - 1,285 (1,285/1,313)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.999
InterPro :
IPR007317 : Uncharacterised protein family UPF0363
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 9, nucl 8, plas 4.5, mito 4, extr_plas 4,
extr 2.5, pero 2, golg 2, E.R._mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201122)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ720116
Mus
sp. (Mouse) : AK003551
Danio
sp. (Zebrafish) : BC049494
Bos
sp. (Cow) : BC119983
Takifugu
sp. (Fugu) : EF445943
Canis
sp. (Dog) : ENSCAFT00000017986
Rattus
sp. (Rat) : XM_001074468
Monodelphis
sp. (Opossum) : XM_001378186
Equus
sp. (Horse) : XM_001488920
Macaca
sp. (Macaque) : XR_010009
HIX0201122
HIT000006834
(
AK023560
)
(Golgi to ER traffic protein 4 homolog.)
genome : 916,270 - 936,071 (19,802)
query : 1 - 2,012 (2,012/2,012)
9 exons
identity = 0.997
5'(0.982;1.000;1.000;1.000;0.993;1.000;1.000;
1.000;0.998)3'
coverage = 1.000
InterPro :
IPR007317 : Uncharacterised protein family UPF0363
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, nucl 6, extr 4, pero 4, mito_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201122)
HIX0201122
HIT000070941
(
AF132954
)
(Golgi to ER traffic protein 4 homolog.)
genome : 916,301 - 935,398 (19,098)
query : 1 - 1,297 (1,297/1,298)
9 exons
identity = 0.979
5'(0.920;1.000;1.000;1.000;0.971;0.993;0.987;
1.000;0.974)3'
coverage = 0.999
InterPro :
IPR007317 : Uncharacterised protein family UPF0363
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 9.5, cyto_nucl 8.5, plas 7, pero 5, cyto 4.5,
mito_pero 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201122)
HIX0201122
HIT000510668 (
ENST00000412734
)
(Golgi to ER traffic protein 4 homolog.)
genome : 917,542 - 930,703 (13,162)
query : 1 - 873 (873/873)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 12, cyto_nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201122)
HIX0201122
HIT000020106
(
AK095251
)
(Activating molecule in BECN1-regulated autophagy protein 1 isoform 1.)
genome : 922,626 - 926,184 (3,559)
query : 1 - 3,559 (3,559/3,559)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 6, nucl 5, cyto 4, cyto_pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201122)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000020143
HIX0201122
HIT000505885 (
ENST00000407192
)
(Golgi to ER traffic protein 4 homolog.)
genome : 923,180 - 936,073 (12,894)
query : 1 - 4,356 (4,356/4,356)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 8, cyto 7, extr_plas 6.5, mito 5, cyto_pero 5,
nucl 4, mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201122)
HIX0201122
HIT000045736
(
AK125863
)
(Golgi to ER traffic protein 4 homolog.)
genome : 923,180 - 935,330 (12,151)
query : 1 - 3,613 (3,613/3,613)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.997)3'
coverage = 1.000
InterPro :
IPR007317 : Uncharacterised protein family UPF0363
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 8, cyto 7, extr_plas 6.5, mito 5, cyto_pero 5,
nucl 4, mito_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201122)
HIX0201122
HIT000539425 (
ENST00000441491
)
(Golgi to ER traffic protein 4 homolog.)
genome : 923,661 - 927,156 (3,496)
query : 1 - 682 (682/682)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, extr 6, cyto 4.5, cyto_nucl 4.16667,
cyto_pero 3.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201122)
HIX0201122
HIT000022753
(
AK097899
)
(Golgi to ER traffic protein 4 homolog.)
genome : 923,785 - 935,326 (11,542)
query : 1 - 3,004 (3,004/3,004)
8 exons
identity = 0.997
5'(0.996;1.000;1.000;0.993;1.000;1.000;1.000;
0.997)3'
coverage = 1.000
InterPro :
IPR007317 : Uncharacterised protein family UPF0363
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 8, cyto 7, extr_plas 6.5, mito 5, cyto_pero 5,
nucl 4, mito_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201122)
HIX0201122
HIT000024918
(
AL133014
)
(Golgi to ER traffic protein 4 homolog.)
genome : 924,656 - 936,073 (11,418)
query : 1 - 2,880 (2,880/2,963)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.999)3'
coverage = 1.000
InterPro :
IPR007317 : Uncharacterised protein family UPF0363
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 8, cyto 7, extr_plas 6.5, mito 5, cyto_pero 5,
nucl 4, mito_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201122)
HIX0201122
HIT000007579
(
AK024305
)
(Golgi to ER traffic protein 4 homolog.)
genome : 924,757 - 935,326 (10,570)
query : 13 - 2,044 (2,032/2,082)
8 exons
identity = 1.000
5'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.994
InterPro :
IPR007317 : Uncharacterised protein family UPF0363
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 8, cyto 7, extr_plas 6.5, mito 5, cyto_pero 5,
nucl 4, mito_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201122)
HIX0201122
HIT000523990 (
ENST00000426056
)
(Golgi to ER traffic protein 4 homolog.)
genome : 926,670 - 930,691 (4,022)
query : 1 - 502 (502/502)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, extr 11, cyto 5.5, extr_plas 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201122)
HIX0201122
HIT000587358 (
ENST00000483469
)
(Golgi to ER traffic protein 4 homolog.)
genome : 927,123 - 932,111 (4,989)
query : 1 - 370 (370/370)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, nucl 6, cyto_golg 6, plas 4, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201122)
HIX0033841
HIT000044022
(
AK124149
)
Representative transcript
(Golgi to ER traffic protein 4 homolog.)
genome : 930,810 - 936,071 (5,262)
query : 1 - 2,978 (2,978/2,978)
2 exons
identity = 0.999
3'(0.999;0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 12, mito 9, cyto 5, E.R._mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033841)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : XM_001053089
HIX0201122
HIT000569215 (
ENST00000464468
)
(Golgi to ER traffic protein 4 homolog.)
genome : 931,937 - 935,295 (3,359)
query : 1 - 676 (676/676)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, plas 7, cyto_nucl 7, pero 5, extr_plas 5,
cyto_golg 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201122)
HIX0006409
HIT000041934
(
BC033747
)
(Arf-GAP with dual PH domain-containing protein 1; Centaurin-alpha-1; Cnt-a1; Putative MAPK-activating protein PM25;)
genome : 937,540 - 994,120 (56,581)
query : 1 - 2,150 (2,150/2,220)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;0.988;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001164 : Arf GTPase activating protein
IPR001849 : Pleckstrin homology domain
GO :
0008060 : Molecular Function : ARF GTPase activator activity
0008270 : Molecular Function : zinc ion binding
0032312 : Biological Process : regulation of ARF GTPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13.5, mito 4, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006409)
HIX0006409
HIT000066515
(
AF082324
)
Representative transcript
(Arf-GAP with dual PH domain-containing protein 1; Centaurin-alpha-1; Cnt-a1; Putative MAPK-activating protein PM25;)
genome : 937,540 - 994,286 (56,747)
query : 11 - 2,323 (2,313/2,378)
11 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;0.988;0.993;1.000;
1.000;1.000;1.000;0.969)5'
coverage = 0.995
InterPro :
IPR001164 : Arf GTPase activating protein
IPR001849 : Pleckstrin homology domain
GO :
0008060 : Molecular Function : ARF GTPase activator activity
0008270 : Molecular Function : zinc ion binding
0032312 : Biological Process : regulation of ARF GTPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13.5, mito 4, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006409)
HIX0006409
HIT000242186
(
AB097049
)
(Arf-GAP with dual PH domain-containing protein 1; Centaurin-alpha-1; Cnt-a1; Putative MAPK-activating protein PM25;)
genome : 937,540 - 994,286 (56,747)
query : 11 - 2,323 (2,313/2,378)
11 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;0.988;0.993;1.000;
1.000;1.000;1.000;0.969)5'
coverage = 0.995
InterPro :
IPR001164 : Arf GTPase activating protein
IPR001849 : Pleckstrin homology domain
GO :
0008060 : Molecular Function : ARF GTPase activator activity
0008270 : Molecular Function : zinc ion binding
0032312 : Biological Process : regulation of ARF GTPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13.5, mito 4, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006409)
HIX0006409
HIT000203435 (
NM_006869
)
(Arf GTPase activating protein family protein.)
genome : 937,537 - 994,289 (56,753)
query : 1 - 2,322 (2,322/2,338)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;0.988;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13.5, mito 4, nucl 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006409)
HIX0006409
HIT000109867 (
ENST00000265846
)
(Arf GTPase activating protein family protein.)
genome : 937,540 - 994,333 (56,794)
query : 1 - 2,363 (2,363/2,363)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13.5, mito 4, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006409)
HIX0006409
HIT000017338
(
AK092471
)
(Arf-GAP with dual PH domain-containing protein 1.)
genome : 937,546 - 966,852 (29,307)
query : 3 - 2,087 (2,085/2,087)
10 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;0.988;0.993;1.000;
1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR001849 : Pleckstrin homology domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006409)
HIX0006409
HIT000544075 (
ENST00000446141
)
(Pleckstrin homology domain containing protein.)
genome : 937,546 - 966,852 (29,307)
query : 1 - 2,085 (2,085/2,085)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 10.5, extr 6, nucl 5.5, mito 3,
pero 3, extr_plas 3, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006409)
HIX0006409
HIT000547230 (
ENST00000449296
)
(Pleckstrin homology domain containing protein.)
genome : 937,546 - 966,852 (29,307)
query : 1 - 2,085 (2,085/2,085)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 10.5, extr 6, nucl 5.5, mito 3,
pero 3, extr_plas 3, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006409)
HIX0006409
HIT000044852
(
AK124979
)
(Arf-GAP with dual PH domain-containing protein 1.)
genome : 937,547 - 945,253 (7,707)
query : 4 - 2,188 (2,185/2,188)
7 exons
identity = 0.982
3'(0.999;1.000;1.000;1.000;0.988;1.000;0.934)5'
coverage = 0.999
InterPro :
IPR001849 : Pleckstrin homology domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13.5, mito 10, extr_plas 9, plas 3.5, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006409)
HIX0006409
HIT000582122 (
ENST00000478000
)
(Pleckstrin homology domain containing protein.)
genome : 937,547 - 945,253 (7,707)
query : 1 - 2,192 (2,192/2,192)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14.5, extr_plas 9.5, mito 8, plas 3.5, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006409)
HIX0006409
HIT000599161 (
ENST00000495809
)
(Pleckstrin homology domain containing protein.)
genome : 937,582 - 941,036 (3,455)
query : 1 - 2,236 (2,236/2,236)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 15.5, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006409)
HIX0006409
HIT000495268
(
AK300644
)
(Arf-GAP with dual PH domain-containing protein 1.)
genome : 938,114 - 960,510 (22,397)
query : 1 - 1,297 (1,297/1,297)
9 exons
identity = 0.995
3'(0.998;1.000;1.000;1.000;0.988;1.000;0.966;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001849 : Pleckstrin homology domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006409)
HIX0006409
HIT000495483
(
AK300859
)
(Arf-GAP with dual PH domain-containing protein 1.)
genome : 938,200 - 960,513 (22,314)
query : 1 - 1,271 (1,271/1,271)
9 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;0.988;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001849 : Pleckstrin homology domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 15, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006409)
HIX0006409
HIT000244110
(
AJ006422
)
(Arf-GAP with dual PH domain-containing protein 1; Centaurin-alpha-1; Cnt-a1; Putative MAPK-activating protein PM25;)
genome : 938,327 - 994,307 (55,981)
query : 9 - 1,562 (1,554/1,562)
11 exons
identity = 0.993
3'(0.962;1.000;1.000;1.000;0.988;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001164 : Arf GTPase activating protein
IPR001849 : Pleckstrin homology domain
GO :
0008060 : Molecular Function : ARF GTPase activator activity
0008270 : Molecular Function : zinc ion binding
0032312 : Biological Process : regulation of ARF GTPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13.5, mito 4, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006409)
HIX0006409
HIT000495623
(
AK300999
)
(Arf-GAP with dual PH domain-containing protein 1.)
genome : 938,347 - 995,043 (56,697)
query : 1 - 1,369 (1,369/1,369)
11 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.988;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001164 : Arf GTPase activating protein
IPR001849 : Pleckstrin homology domain
GO :
0008060 : Molecular Function : ARF GTPase activator activity
0008270 : Molecular Function : zinc ion binding
0032312 : Biological Process : regulation of ARF GTPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25.5, mito_pero 13.5, cyto 3.5, cyto_nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006409)
HIX0006409
HIT000638945 (
ENST00000539900
)
(Arf GTPase activating protein family protein.)
genome : 938,347 - 995,043 (56,697)
query : 1 - 1,369 (1,369/1,369)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25.5, mito_pero 13.5, cyto 3.5, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006409)
HIX0006409
HIT000551109 (
ENST00000453175
)
(Pleckstrin homology domain containing protein.)
genome : 938,554 - 943,909 (5,356)
query : 19 - 742 (724/742)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.976
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 13.1667, cyto_plas 10.5,
nucl 5.5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006409)
HIX0006409
HIT000535420 (
ENST00000437486
)
(Pleckstrin homology domain containing protein.)
genome : 939,102 - 960,526 (21,425)
query : 1 - 622 (622/622)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18, mito 6, E.R. 4, lyso 2, E.R._golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006409)
HIX0006409
HIT000552317 (
ENST00000454383
)
(Pleckstrin homology domain containing protein.)
genome : 939,779 - 974,816 (35,038)
query : 1 - 576 (576/576)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 12.5, mito 7, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006409)
HIX0006409
HIT000551757 (
ENST00000453823
)
(Pleckstrin homology domain containing protein.)
genome : 940,170 - 967,150 (26,981)
query : 1 - 560 (560/560)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006409)
HIX0006409
HIT000585378 (
ENST00000481406
)
(Conserved hypothetical protein.)
genome : 943,594 - 944,775 (1,182)
query : 1 - 395 (395/395)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, nucl 13, cyto 12, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006409)
HIX0006409
HIT000568154 (
ENST00000463358
)
(Arf GTPase activating protein family protein.)
genome : 943,789 - 985,452 (41,664)
query : 1 - 595 (595/595)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 11.5, mito 5, extr 4, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006409)
HIX0006409
HIT000582030 (
ENST00000477906
)
(Arf GTPase activating protein family protein.)
genome : 943,824 - 994,986 (51,163)
query : 1 - 579 (579/579)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, nucl 7.5, cyto_nucl 7.5, cyto 6.5,
E.R._mito 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006409)
HIX0006409
HIT000533877 (
ENST00000435943
)
(Arf GTPase activating protein family protein.)
genome : 943,884 - 995,042 (51,159)
query : 1 - 559 (559/559)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 8, cyto_nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006409)
HIX0006409
HIT000592174 (
ENST00000488527
)
(Conserved hypothetical protein.)
genome : 943,884 - 962,974 (19,091)
query : 1 - 584 (584/584)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, mito 8, cyto_plas 8, cyto_golg 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006409)
HIX0006409
HIT000599045 (
ENST00000495686
)
(Conserved hypothetical protein.)
genome : 959,605 - 966,691 (7,087)
query : 1 - 586 (586/586)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, extr 12, cyto_nucl 10, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006409)
HIX0217500
HIT000365956 (
NM_001031617
)
(Cytochrome c oxidase assembly protein COX19; hCOX19;)
genome : 1,004,486 - 1,015,235 (10,750)
query : 1 - 4,891 (4,891/4,896)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29, cyto_nucl 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217500)
HIX0217500
HIT000333342
(
AY957566
)
Representative transcript
(Cytochrome c oxidase assembly protein COX19; hCOX19;)
genome : 1,005,719 - 1,015,185 (9,467)
query : 1 - 3,603 (3,603/3,612)
3 exons
identity = 0.998
3'(0.998;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR009069 : Cysteine alpha-hairpin motif superfamily
IPR010625 : CHCH
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29, cyto_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217500)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK148526
Bos
sp. (Cow) : BC134520
Danio
sp. (Zebrafish) : BC139534
Tetraodon
sp. (Tetraodon) : CR698894
Canis
sp. (Dog) : ENSCAFT00000018031
Equus
sp. (Horse) : ENSECAT00000016488
Pongo
sp. (Orangutan) : ENSPPYT00000020144
Takifugu
sp. (Fugu) : SINFRUT00000127662
Rattus
sp. (Rat) : XM_001074417
Macaca
sp. (Macaque) : XM_001084410
Pan
sp. (Chimpanzee) : XM_001144871
Gallus
sp. (Chicken) : XM_414760
HIX0217500
HIT000136741 (
ENST00000344111
)
(Cytochrome c oxidase assembly protein COX19; hCOX19;)
genome : 1,005,711 - 1,015,235 (9,525)
query : 1 - 3,666 (3,666/3,666)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217500)
HIX0217500
HIT000006459
(
AK023185
)
(Cytochrome c oxidase assembly protein COX19; hCOX19;)
genome : 1,005,802 - 1,015,170 (9,369)
query : 1 - 3,511 (3,511/3,511)
3 exons
identity = 0.999
3'(0.999;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR009069 : Cysteine alpha-hairpin motif superfamily
IPR010625 : CHCH
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29, cyto_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217500)
HIX0217500
HIT000386563
(
BC110420
)
(Cytochrome c oxidase assembly protein COX19; hCOX19;)
genome : 1,006,577 - 1,015,173 (8,597)
query : 1 - 2,737 (2,737/2,840)
3 exons
identity = 0.999
3'(0.998;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR009069 : Cysteine alpha-hairpin motif superfamily
IPR010625 : CHCH
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29, cyto_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217500)
HIX0217500
HIT000097230
(
BC042434
)
(Cytochrome c oxidase assembly protein COX19; hCOX19;)
genome : 1,008,505 - 1,015,145 (6,641)
query : 1 - 783 (783/909)
3 exons
identity = 0.999
3'(0.998;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR009069 : Cysteine alpha-hairpin motif superfamily
IPR010625 : CHCH
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 4.5, cyto_nucl 4, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217500)
HIX0217500
HIT000259266
(
BC053372
)
(Cytochrome c oxidase assembly protein COX19; hCOX19;)
genome : 1,008,626 - 1,015,152 (6,527)
query : 1 - 668 (668/723)
3 exons
identity = 0.997
3'(0.996;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR009069 : Cysteine alpha-hairpin motif superfamily
IPR010625 : CHCH
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29, cyto_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217500)
HIX0217500
HIT000259836
(
BC058158
)
(Cytochrome c oxidase assembly protein COX19; hCOX19;)
genome : 1,008,626 - 1,015,167 (6,542)
query : 1 - 683 (683/700)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR009069 : Cysteine alpha-hairpin motif superfamily
IPR010625 : CHCH
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29, cyto_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217500)
HIX0217500
HIT000337294
(
BC103632
)
(Cytochrome c oxidase assembly protein COX19; hCOX19;)
genome : 1,008,999 - 1,015,207 (6,209)
query : 5 - 354 (350/400)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.989
InterPro :
IPR009069 : Cysteine alpha-hairpin motif superfamily
IPR010625 : CHCH
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29, cyto_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217500)
HIX0217500
HIT000264338
(
BC070383
)
(Cytochrome c oxidase assembly protein COX19; hCOX19;)
genome : 1,008,998 - 1,015,181 (6,184)
query : 1 - 325 (325/357)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.997
InterPro :
IPR009069 : Cysteine alpha-hairpin motif superfamily
IPR010625 : CHCH
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29, cyto_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217500)
HIX0217500
HIT000570812 (
ENST00000466146
)
(Cytochrome c oxidase assembly protein COX19.)
genome : 1,012,337 - 1,015,185 (2,849)
query : 1 - 714 (714/714)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217500)
HIX0217500
HIT000571482 (
ENST00000466853
)
(Cytochrome c oxidase assembly protein COX19.)
genome : 1,012,578 - 1,014,752 (2,175)
query : 1 - 561 (561/561)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217500)
HIX0006411
HIT000040010
(
BC025761
)
Representative transcript
(Cytochrome P450 2W1 precursor.)
genome : 1,022,835 - 1,029,276 (6,442)
query : 1 - 2,304 (2,304/2,354)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001128 : Cytochrome P450
IPR002401 : Cytochrome P450, E-class, group I
IPR017972 : Cytochrome P450, conserved site
GO :
0005506 : Molecular Function : iron ion binding
0016705 : Molecular Function : oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
0020037 : Molecular Function : heme binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 16, plas 10, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006411)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : BC055556
Oryzias
sp. (Medaka) : EF537028
Bos
sp. (Cow) : ENSBTAT00000023544
Equus
sp. (Horse) : ENSECAT00000024837
Gallus
sp. (Chicken) : ENSGALT00000006446
Oryzias
sp. (Medaka) : ENSORLT00000018672
Pongo
sp. (Orangutan) : ENSPPYT00000020145
Rattus
sp. (Rat) : ENSRNOT00000044730
Tetraodon
sp. (Tetraodon) : GSTENT00003469001
Takifugu
sp. (Fugu) : SINFRUT00000170750
Macaca
sp. (Macaque) : XM_001097570
Pan
sp. (Chimpanzee) : XM_001145101
Monodelphis
sp. (Opossum) : XM_001378282
Gallus
sp. (Chicken) : XM_422750
Canis
sp. (Dog) : XM_548722
Mus
sp. (Mouse) : XM_620268
Danio
sp. (Zebrafish) : XM_695792
Macaca
sp. (Macaque) : XR_011473
HIX0006411
HIT000206649 (
NM_017781
)
(Cytochrome P450 2W1 precursor.)
genome : 1,022,835 - 1,029,276 (6,442)
query : 1 - 2,304 (2,304/2,354)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 16, plas 10, extr 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006411)
HIX0006411
HIT000118146 (
ENST00000308919
)
(Cytochrome P450 2W1 precursor.)
genome : 1,022,835 - 1,029,276 (6,442)
query : 1 - 2,304 (2,304/2,304)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 16, plas 10, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006411)
HIX0006411
HIT000002841
(
AK000366
)
(Cytochrome P450 2W1 precursor.)
genome : 1,022,994 - 1,029,276 (6,283)
query : 1 - 2,361 (2,361/2,384)
8 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.994;1.000;1.000;
0.998)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 10, nucl 6.5, mito 4.5,
mito_pero 4.33333, extr 4, E.R._mito 3.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006411)
HIX0006411
HIT000132780 (
ENST00000340150
)
(Cytochrome P450 2W1 precursor.)
genome : 1,022,994 - 1,029,276 (6,283)
query : 1 - 2,361 (2,361/2,361)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 10, nucl 6.5, mito 4.5,
mito_pero 4.33333, extr 4, E.R._mito 3.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006411)
HIX0006411
HIT000567288 (
ENST00000462453
)
(Cytochrome P450 2W1 precursor.)
genome : 1,026,037 - 1,026,911 (875)
query : 1 - 566 (566/566)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 9, mito 5, cyto_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006411)
HIX0006411
HIT000573023 (
ENST00000468456
)
(Cytochrome P450 2W1 precursor.)
genome : 1,026,050 - 1,027,016 (967)
query : 1 - 557 (557/557)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 9, mito 5, cyto_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006411)
HIX0006411
HIT000513827 (
ENST00000415893
)
(Cytochrome P450 2W1 precursor.)
genome : 1,026,293 - 1,028,440 (2,148)
query : 1 - 890 (890/890)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, extr 10, cyto_nucl 9.16667,
cyto_pero 7.33333, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006411)
HIX0006412
HIT000210580 (
NM_032350
)
(Uncharacterized protein C7orf50;)
genome : 1,036,623 - 1,177,893 (141,271)
query : 1 - 1,293 (1,293/1,311)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, extr 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006412)
HIX0006412
HIT000559907 (
NM_001134395
)
(Uncharacterized protein C7orf50;)
genome : 1,036,623 - 1,177,893 (141,271)
query : 1 - 1,283 (1,283/1,301)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, extr 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006412)
HIX0006412
HIT000559908 (
NM_001134396
)
(Uncharacterized protein C7orf50;)
genome : 1,036,623 - 1,177,893 (141,271)
query : 1 - 1,264 (1,264/1,282)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, extr 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006412)
HIX0006412
HIT000032683
(
BC006224
)
Representative transcript
(Uncharacterized protein C7orf50;)
genome : 1,036,642 - 1,177,893 (141,252)
query : 1 - 1,274 (1,274/1,301)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR019327 : Protein of unknown function DUF2373
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006412)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB170407
Mus
sp. (Mouse) : AK014271
Rattus
sp. (Rat) : BC088429
Bos
sp. (Cow) : BC122639
Gallus
sp. (Chicken) : BX929499
Equus
sp. (Horse) : ENSECAT00000024481
Oryzias
sp. (Medaka) : ENSORLT00000009639
Pongo
sp. (Orangutan) : ENSPPYT00000020146
Pan
sp. (Chimpanzee) : XM_001140777
Pan
sp. (Chimpanzee) : XM_001175352
Monodelphis
sp. (Opossum) : XM_001378329
Danio
sp. (Zebrafish) : XM_690895
Canis
sp. (Dog) : XM_843376
HIX0006412
HIT000311275 (
ENST00000357429
)
(Uncharacterized protein C7orf50;)
genome : 1,036,622 - 1,177,893 (141,272)
query : 1 - 1,294 (1,294/1,294)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006412)
HIX0006412
HIT000480402 (
ENST00000397100
)
(Uncharacterized protein C7orf50;)
genome : 1,036,623 - 1,177,893 (141,271)
query : 1 - 1,264 (1,264/1,264)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006412)
HIX0006412
HIT000243600
(
AF495721
)
(Uncharacterized protein C7orf50;)
genome : 1,036,642 - 1,177,876 (141,235)
query : 2 - 2,104 (2,103/2,123)
5 exons
identity = 0.985
3'(0.999;1.000;1.000;1.000;0.967)5'
coverage = 1.000
InterPro :
IPR019327 : Protein of unknown function DUF2373
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006412)
HIX0006412
HIT000480400 (
ENST00000397098
)
(Uncharacterized protein C7orf50;)
genome : 1,036,642 - 1,177,876 (141,235)
query : 1 - 2,131 (2,131/2,131)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006412)
HIX0006412
HIT000509985 (
ENST00000412051
)
(Uncharacterized protein C7orf50;)
genome : 1,036,652 - 1,067,975 (31,324)
query : 1 - 1,147 (1,147/1,147)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, nucl 9, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006412)
HIX0006412
HIT000591736 (
ENST00000488073
)
(Uncharacterized protein C7orf50 homolog;)
genome : 1,037,130 - 1,167,024 (129,895)
query : 1 - 853 (853/853)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 13, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006412)
HIX0006412
HIT000542362 (
ENST00000444428
)
(Uncharacterized protein C7orf50;)
genome : 1,037,243 - 1,094,942 (57,700)
query : 1 - 507 (507/507)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 16.5, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006412)
HIX0006412
HIT000594698 (
ENST00000491163
)
(Uncharacterized protein C7orf50;)
genome : 1,037,269 - 1,177,896 (140,628)
query : 1 - 621 (621/621)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006412)
HIX0006412
HIT000191826
(
L07392
)
(Conserved hypothetical protein.)
genome : 1,049,672 - 1,067,975 (18,304)
query : 1 - 188 (188/188)
2 exons
identity = 0.953
3'(0.963;0.939)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, nucl 13, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006412)
HIX0151925
HIT000343782 (
ENST00000362153
)
(Non-protein coding transcript.)
genome : 1,062,569 - 1,062,662 (94)
query : 1 - 94 (94/94)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0151925)
HIX0151925
HIT000658151 (
NR_029898
)
(Non-protein coding transcript.)
genome : 1,062,569 - 1,062,662 (94)
query : 1 - 94 (94/94)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0151925)
HIX0006412
HIT000091143
(
BC025971
)
(Conserved hypothetical protein.)
genome : 1,064,140 - 1,067,988 (3,849)
query : 1 - 2,619 (2,619/2,640)
2 exons
identity = 0.997
3'(0.996;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 13.5, cyto 8.5, extr 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006412)
HIX0006412
HIT000570368 (
ENST00000465681
)
(Conserved hypothetical protein.)
genome : 1,064,138 - 1,067,988 (3,851)
query : 1 - 2,621 (2,621/2,621)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 13.5, cyto 8.5, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006412)
HIX0168174
HIT000516875 (
ENST00000418941
)
(Hypothetical short protein.)
genome : 1,068,661 - 1,083,527 (14,867)
query : 1 - 535 (535/535)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168174)
HIX0006414
HIT000542781 (
ENST00000444847
)
(Conserved hypothetical protein.)
genome : 1,084,212 - 1,098,097 (13,886)
query : 1 - 1,053 (1,053/1,053)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006414)
HIX0006414
HIT000585375 (
ENST00000481403
)
(Hypothetical short protein.)
genome : 1,084,241 - 1,085,452 (1,212)
query : 1 - 534 (534/534)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 2.5, mito 2, cyto_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006414)
HIX0201219
HIT000019867
(
AK095012
)
Representative transcript
(Conserved hypothetical protein.)
genome : 1,089,312 - 1,091,649 (2,338)
query : 1 - 2,338 (2,338/2,338)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, mito 7, cyto 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201219)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000020148
HIX0006414
pHIT000012525 ( pHIT000012525 )
(Conserved hypothetical protein.)
genome : 1,092,745 - 1,098,153 (5,409)
query : 1 - 1,299 (1,299/1,299)
3 exons
SOSUI :
MEMBRANE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006414)
CAGE tag :
H22BB96C1307
HIX0006414
HIT000578690 (
ENST00000474396
)
(Hypothetical short protein.)
genome : 1,094,915 - 1,096,188 (1,274)
query : 1 - 654 (654/654)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
This sequence is too short.
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006414)
HIX0006414
HIT000480397 (
ENST00000397095
)
(Conserved hypothetical protein.)
genome : 1,094,921 - 1,098,894 (3,974)
query : 1 - 1,966 (1,966/1,966)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006414)
HIX0006414
HIT000432037
(
AK313171
)
Representative transcript
(Probable G-protein coupled receptor 146; G-protein coupled receptor PGR8;)
genome : 1,094,945 - 1,098,153 (3,209)
query : 1 - 1,201 (1,201/1,201)
2 exons
identity = 0.999
5'(1.000;0.999)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006414)
HIX0207821
HIT000494790
(
AK300166
)
Representative transcript
(Probable G-protein coupled receptor 146; G-protein coupled receptor PGR8;)
genome : 1,094,996 - 1,098,897 (3,902)
query : 1 - 1,562 (1,562/1,562)
2 exons
identity = 0.998
3'(1.000;0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17.5, extr 11, cyto_mito 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207821)
HIX0207821
HIT000663132 (
ENST00000549241
)
(Probable G-protein coupled receptor 146; G-protein coupled receptor PGR8;)
genome : 1,094,996 - 1,098,897 (3,902)
query : 1 - 1,562 (1,562/1,562)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17.5, extr 11, cyto_mito 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207821)
HIX0006414
HIT000525614 (
ENST00000427680
)
(Conserved hypothetical protein.)
genome : 1,096,293 - 1,097,267 (975)
query : 1 - 313 (313/313)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
This sequence is too short.
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006414)
HIX0006414
HIT000022483
(
AK097629
)
(Probable G-protein coupled receptor 146; G-protein coupled receptor PGR8;)
genome : 1,096,936 - 1,099,229 (2,294)
query : 1 - 2,220 (2,220/2,240)
2 exons
identity = 0.990
5'(0.975;0.992)3'
coverage = 0.991
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31.5, extr_plas 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006414)
HIX0006414
HIT000036594
(
BC014241
)
(Conserved hypothetical protein.)
genome : 1,097,141 - 1,098,897 (1,757)
query : 1 - 1,757 (1,757/1,776)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006414)
HIX0006414
HIT000317803 (
NM_138445
)
(Conserved hypothetical protein.)
genome : 1,097,141 - 1,098,897 (1,757)
query : 1 - 1,757 (1,757/1,776)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006414)
HIX0006414
HIT000114814 (
ENST00000297468
)
(Conserved hypothetical protein.)
genome : 1,097,141 - 1,098,897 (1,757)
query : 1 - 1,757 (1,757/1,757)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006414)
HIX0006414
HIT000085511
(
AY255535
)
(Conserved hypothetical protein.)
genome : 1,097,329 - 1,097,781 (453)
query : 1 - 453 (453/453)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, plas 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006414)
HIX0168651
HIT000547655 (
ENST00000449721
)
(Hypothetical short protein.)
genome : 1,114,086 - 1,117,672 (3,587)
query : 1 - 869 (869/869)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, extr 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168651)
HIX0168121
HIT000513590 (
ENST00000415656
)
(Hypothetical short protein.)
genome : 1,120,499 - 1,121,814 (1,316)
query : 1 - 302 (302/302)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168121)
HIX0167652
HIT000424387
(
AK291590
)
Representative transcript
(G-protein coupled estrogen receptor 1; Chemoattractant receptor-like 2; Flow-induced endothelial G-protein coupled receptor 1; FEG-1; G-protein coupled receptor 30; GPCR-BR; IL8-related receptor DRY12; Lymphocyte-derived G-protein coupled receptor; LYGPR; Membrane estrogen receptor; mER;)
genome : 1,121,844 - 1,132,508 (10,665)
query : 1 - 1,533 (1,533/1,853)
2 exons
identity = 0.998
5'(0.985;0.999)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167652)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK030375
Monodelphis
sp. (Opossum) : ENSMODT00000011190
Oryzias
sp. (Medaka) : ENSORLT00000006337
Pongo
sp. (Orangutan) : ENSPPYT00000021676
Pan
sp. (Chimpanzee) : ENSPTRT00000034800
Tetraodon
sp. (Tetraodon) : GSTENT00034415001
Danio
sp. (Zebrafish) : NM_001128723
Takifugu
sp. (Fugu) : SINFRUT00000130927
Rattus
sp. (Rat) : U92802
Macaca
sp. (Macaque) : XM_001084531
Equus
sp. (Horse) : XM_001488747
Canis
sp. (Dog) : XM_537923
Bos
sp. (Cow) : XM_606236
HIX0167652
HIT000503818 (
ENST00000401670
)
(G-protein coupled estrogen receptor 1; Chemoattractant receptor-like 2; Flow-induced endothelial G-protein coupled receptor 1; FEG-1; G-protein coupled receptor 30; GPCR-BR; IL8-related receptor DRY12; Lymphocyte-derived G-protein coupled receptor; LYGPR; Membrane estrogen receptor; mER;)
genome : 1,121,844 - 1,132,517 (10,674)
query : 1 - 1,542 (1,542/1,542)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167652)
HIX0167652
pHIT000105303 ( pHIT000105303 )
(G-protein coupled estrogen receptor 1; Chemoattractant receptor-like 2; Flow-induced endothelial G-protein coupled receptor 1; FEG-1; G-protein coupled receptor 30; GPCR-BR; IL8-related receptor DRY12; Lymphocyte-derived G-protein coupled receptor; LYGPR; Membrane estrogen receptor; mER;)
genome : 1,122,015 - 1,132,492 (10,478)
query : 1 - 1,485 (1,485/1,485)
3 exons
SOSUI :
MEMBRANE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167652)
CAGE tag :
T07R001176A2
HIX0167652
HIT000511302 (
ENST00000413368
)
(G-protein coupled estrogen receptor 1.)
genome : 1,126,443 - 1,131,585 (5,143)
query : 1 - 1,105 (1,105/1,105)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 17.5, extr_plas 10.5, mito 6, nucl 4,
E.R._mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167652)
HIX0167652
HIT000422385
(
AK289588
)
(G-protein coupled estrogen receptor 1; Chemoattractant receptor-like 2; Flow-induced endothelial G-protein coupled receptor 1; FEG-1; G-protein coupled receptor 30; GPCR-BR; IL8-related receptor DRY12; Lymphocyte-derived G-protein coupled receptor; LYGPR; Membrane estrogen receptor; mER;)
genome : 1,127,749 - 1,132,508 (4,760)
query : 1 - 1,675 (1,675/1,798)
2 exons
identity = 0.999
5'(1.000;0.999)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167652)
HIX0167652
HIT000325088
(
X98510
)
(G-protein coupled estrogen receptor 1; Chemoattractant receptor-like 2; Flow-induced endothelial G-protein coupled receptor 1; FEG-1; G-protein coupled receptor 30; GPCR-BR; IL8-related receptor DRY12; Lymphocyte-derived G-protein coupled receptor; LYGPR; Membrane estrogen receptor; mER;)
genome : 1,131,192 - 1,132,501 (1,310)
query : 1 - 1,310 (1,310/1,310)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167652)
HIX0167652
HIT000220555
(
U58828
)
(G-protein coupled estrogen receptor 1.)
genome : 1,131,365 - 1,132,490 (1,126)
query : 1 - 1,075 (1,075/1,077)
2 exons
identity = 0.984
5'(0.949;0.988)3'
coverage = 0.998
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167652)
HIX0167652
HIT000268613
(
CR541741
)
(G-protein coupled estrogen receptor 1; Chemoattractant receptor-like 2; Flow-induced endothelial G-protein coupled receptor 1; FEG-1; G-protein coupled receptor 30; GPCR-BR; IL8-related receptor DRY12; Lymphocyte-derived G-protein coupled receptor; LYGPR; Membrane estrogen receptor; mER;)
genome : 1,131,365 - 1,132,492 (1,128)
query : 1 - 1,128 (1,128/1,128)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167652)
HIX0167652
HIT000325391
(
Y08162
)
(G-protein coupled estrogen receptor 1; Chemoattractant receptor-like 2; Flow-induced endothelial G-protein coupled receptor 1; FEG-1; G-protein coupled receptor 30; GPCR-BR; IL8-related receptor DRY12; Lymphocyte-derived G-protein coupled receptor; LYGPR; Membrane estrogen receptor; mER;)
genome : 1,131,365 - 1,132,492 (1,128)
query : 1 - 1,128 (1,128/1,128)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167652)
HIX0167652
HIT000383802
(
AF027956
)
(G-protein coupled estrogen receptor 1; Chemoattractant receptor-like 2; Flow-induced endothelial G-protein coupled receptor 1; FEG-1; G-protein coupled receptor 30; GPCR-BR; IL8-related receptor DRY12; Lymphocyte-derived G-protein coupled receptor; LYGPR; Membrane estrogen receptor; mER;)
genome : 1,131,365 - 1,132,490 (1,126)
query : 1 - 1,126 (1,126/1,128)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 0.998
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167652)
HIX0167652
HIT000268528
(
CR541655
)
(G-protein coupled estrogen receptor 1; Chemoattractant receptor-like 2; Flow-induced endothelial G-protein coupled receptor 1; FEG-1; G-protein coupled receptor 30; GPCR-BR; IL8-related receptor DRY12; Lymphocyte-derived G-protein coupled receptor; LYGPR; Membrane estrogen receptor; mER;)
genome : 1,131,365 - 1,132,489 (1,125)
query : 1 - 1,125 (1,125/1,125)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167652)
HIX0167652
HIT000487640
(
AB451427
)
(G-protein coupled estrogen receptor 1; Chemoattractant receptor-like 2; Flow-induced endothelial G-protein coupled receptor 1; FEG-1; G-protein coupled receptor 30; GPCR-BR; IL8-related receptor DRY12; Lymphocyte-derived G-protein coupled receptor; LYGPR; Membrane estrogen receptor; mER;)
genome : 1,131,365 - 1,132,489 (1,125)
query : 1 - 1,125 (1,125/1,125)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167652)
HIX0217622
HIT000085656
(
AY265807
)
(Conserved hypothetical protein.)
genome : 1,132,574 - 1,133,377 (804)
query : 1 - 804 (804/804)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 3.5, cyto_nucl 3, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217622)
HIX0217622
HIT000085657
(
AY265808
)
(Conserved hypothetical protein.)
genome : 1,132,574 - 1,133,377 (804)
query : 1 - 319 (319/319)
2 exons
identity = 0.982
5'(1.000;0.918)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 2.5, cyto_nucl 2.5, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217622)
HIX0217622
HIT000085658
(
AY265809
)
Representative transcript
(Conserved hypothetical protein.)
genome : 1,132,574 - 1,133,377 (804)
query : 1 - 571 (571/571)
2 exons
identity = 0.993
5'(0.996;0.991)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto 8.5, mito 8, cyto_pero 5, nucl 4,
E.R._mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217622)
HIX0187537
pHIT000012540 ( pHIT000012540 )
Representative transcript
(Hypothetical protein.)
genome : 1,139,353 - 1,166,614 (27,262)
query : 1 - 306 (306/306)
4 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0187537)
CAGE tag :
H21BA02O1808
HIX0187537
pHIT000079628 ( pHIT000079628 )
(Hypothetical short protein.)
genome : 1,139,353 - 1,166,614 (27,262)
query : 1 - 72 (72/72)
2 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0187537)
CAGE tag :
H21BA02O1808
HIX0187537
pHIT000080135 ( pHIT000080135 )
(Hypothetical short protein.)
genome : 1,139,353 - 1,166,614 (27,262)
query : 1 - 225 (225/225)
3 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0187537)
CAGE tag :
H22BA33M1907
HIX0006417
HIT000503904 (
ENST00000401903
)
(AN1-type zinc finger protein 2A.)
genome : 1,191,707 - 1,199,814 (8,108)
query : 1 - 968 (968/968)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006417)
HIX0006417
HIT000089127
(
BC016963
)
(AN1-type zinc finger protein 2A.)
genome : 1,192,543 - 1,199,789 (7,247)
query : 2 - 853 (852/938)
5 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;0.989)5'
coverage = 0.999
InterPro :
IPR000058 : Zinc finger, AN1-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 8, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006417)
HIX0006417
HIT000010392
(
AK027118
)
(AN1-type zinc finger protein 2A.)
genome : 1,192,543 - 1,199,793 (7,251)
query : 5 - 846 (842/883)
5 exons
identity = 0.994
3'(0.991;1.000;1.000;1.000;0.990)5'
coverage = 0.995
InterPro :
IPR000058 : Zinc finger, AN1-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006417)
HIX0006417
HIT000040821
(
BC029558
)
(AN1-type zinc finger protein 2A.)
genome : 1,192,543 - 1,199,798 (7,256)
query : 1 - 844 (844/878)
5 exons
identity = 0.991
3'(0.997;0.977;1.000;1.000;0.980)5'
coverage = 1.000
InterPro :
IPR000058 : Zinc finger, AN1-type
IPR003615 : HNH nuclease
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006417)
HIX0006417
HIT000318586 (
NM_182491
)
(AN1-type zinc finger protein 2A.)
genome : 1,192,543 - 1,199,855 (7,313)
query : 1 - 901 (901/907)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.993
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006417)
HIX0006417
HIT000120918 (
ENST00000316495
)
(AN1-type zinc finger protein 2A.)
genome : 1,192,543 - 1,199,814 (7,272)
query : 1 - 860 (860/860)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006417)
HIX0006417
HIT000480385 (
ENST00000397083
)
(AN1-type zinc finger protein 2A.)
genome : 1,192,543 - 1,199,789 (7,247)
query : 1 - 852 (852/852)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006417)
HIX0006417
HIT000422967
(
AK290170
)
Representative transcript
(AN1-type zinc finger protein 2A.)
genome : 1,192,544 - 1,199,814 (7,271)
query : 1 - 859 (859/859)
5 exons
identity = 0.990
3'(0.994;0.992;0.989;1.000;0.977)5'
coverage = 1.000
InterPro :
IPR000058 : Zinc finger, AN1-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006417)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB170407
Mus
sp. (Mouse) : AK146082
Danio
sp. (Zebrafish) : BC055589
Rattus
sp. (Rat) : BC085928
Bos
sp. (Cow) : BC134789
Pongo
sp. (Orangutan) : CR859526
Equus
sp. (Horse) : ENSECAT00000022965
Oryzias
sp. (Medaka) : ENSORLT00000005998
Pongo
sp. (Orangutan) : ENSPPYT00000015343
Tetraodon
sp. (Tetraodon) : GSTENT00034438001
Takifugu
sp. (Fugu) : SINFRUT00000158735
Monodelphis
sp. (Opossum) : XM_001378474
Pan
sp. (Chimpanzee) : XM_518927
Canis
sp. (Dog) : XM_537924
HIX0006417
HIT000686511 (
ENST00000574135
)
(Conserved hypothetical protein.)
genome : 1,192,544 - 1,197,368 (4,825)
query : 1 - 433 (433/433)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto 5.5, cyto_nucl 4.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006417)
HIX0006417
HIT000575877 (
ENST00000471448
)
(Conserved hypothetical protein.)
genome : 1,192,544 - 1,195,313 (2,770)
query : 1 - 542 (542/542)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16.5, extr 9, mito_pero 9, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006417)
HIX0006417
HIT000043871
(
AK123998
)
(AN1-type zinc finger protein 2A.)
genome : 1,193,840 - 1,196,333 (2,494)
query : 1 - 2,431 (2,431/2,431)
2 exons
identity = 0.999
3'(0.998;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 19, cyto 7, plas 2, extr 1, nucl 1, E.R. 1,
lyso 1, cysk_plas 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006417)
HIX0006417
HIT000021590
(
AK096735
)
(AN1-type zinc finger protein 2A.)
genome : 1,193,840 - 1,195,350 (1,511)
query : 1 - 1,511 (1,511/1,511)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 10.5, cyto 9.5, nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006417)
HIX0006417
HIT000588802 (
ENST00000484977
)
(AN1-type zinc finger protein 2A.)
genome : 1,196,659 - 1,199,855 (3,197)
query : 1 - 1,084 (1,084/1,084)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 4, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006417)
HIX0006417
HIT000582253 (
ENST00000478137
)
(Hypothetical short protein.)
genome : 1,199,662 - 1,200,395 (734)
query : 1 - 557 (557/557)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006417)
HIX0021730
HIT000520942 (
ENST00000423008
)
(Hypothetical protein.)
genome : 1,200,010 - 1,204,903 (4,894)
query : 1 - 1,401 (1,401/1,401)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021730)
HIX0021730
HIT000015460
(
AK090593
)
Representative transcript
(Conserved hypothetical protein.)
genome : 1,200,128 - 1,205,594 (5,467)
query : 1 - 1,974 (1,974/1,974)
3 exons
identity = 0.987
5'(1.000;1.000;0.986)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 27, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021730)
HIX0021730
HIT000520164 (
ENST00000422230
)
(Hypothetical short protein.)
genome : 1,200,130 - 1,204,211 (4,082)
query : 1 - 545 (545/545)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, mito 6, cyto 3, E.R._mito 3, cyto_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021730)
HIX0021730
HIT000511640 (
ENST00000413706
)
(Hypothetical short protein.)
genome : 1,200,227 - 1,203,127 (2,901)
query : 1 - 674 (674/674)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 8.5, cyto 8, extr_plas 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021730)
HIX0188513
pHIT000012544 ( pHIT000012544 )
Representative transcript
(Hypothetical protein.)
genome : 1,212,896 - 1,213,165 (270)
query : 1 - 270 (270/270)
1 exon
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0188513)
CAGE tag :
H40BC08B0201
HIX0034127
HIT000120847 (
ENST00000316333
)
(Homeobox, conserved site containing protein.)
genome : 1,272,543 - 1,276,954 (4,412)
query : 1 - 2,048 (2,048/2,048)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034127)
HIX0034127
pHIT000105313 ( pHIT000105313 )
Representative transcript
(Conserved hypothetical protein.)
genome : 1,272,654 - 1,286,406 (13,753)
query : 1 - 984 (984/984)
4 exons
InterPro :
IPR017970 : Homeobox, conserved site
GO :
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034127)
CAGE tag :
T07R001341C8
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : D87748
Canis
sp. (Dog) : ENSCAFT00000018714
Danio
sp. (Zebrafish) : ENSDART00000055157
Oryzias
sp. (Medaka) : ENSORLT00000005974
Tetraodon
sp. (Tetraodon) : GSTENT00034439001
Mus
sp. (Mouse) : S83543
Takifugu
sp. (Fugu) : SINFRUT00000167998
Pan
sp. (Chimpanzee) : XM_001175360
Bos
sp. (Cow) : XM_001256731
Gallus
sp. (Chicken) : XM_414766
HIX0034127
HIT000398049 (
NM_001080461
)
(Homeobox, conserved site containing protein.)
genome : 1,272,654 - 1,276,613 (3,960)
query : 1 - 1,596 (1,596/1,596)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034127)
HIX0034127
pHIT000105306 ( pHIT000105306 )
(Conserved hypothetical protein.)
genome : 1,272,654 - 1,276,613 (3,960)
query : 1 - 819 (819/819)
4 exons
InterPro :
IPR017970 : Homeobox, conserved site
GO :
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034127)
CAGE tag :
T07F0012E7D8
HIX0034127
pHIT000105315 ( pHIT000105315 )
(Conserved hypothetical protein.)
genome : 1,272,654 - 1,276,613 (3,960)
query : 1 - 1,596 (1,596/1,596)
3 exons
InterPro :
IPR017970 : Homeobox, conserved site
GO :
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034127)
CAGE tag :
T07R0014557A
HIX0168712
HIT000551732 (
ENST00000453798
)
(Hypothetical short protein.)
genome : 1,306,989 - 1,308,903 (1,915)
query : 1 - 433 (433/433)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 9.5, cyto_nucl 7.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168712)
HIX0006418
HIT000597410 (
ENST00000493998
)
(Non-protein coding transcript.)
genome : 1,468,101 - 1,477,247 (9,147)
query : 1 - 404 (404/404)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006418)
HIX0006418
HIT000016853
(
AK091986
)
(MICAL-like protein 2.)
genome : 1,468,115 - 1,479,067 (10,953)
query : 1 - 2,722 (2,722/2,722)
3 exons
identity = 1.000
3'(1.000;1.000;0.999)5'
coverage = 1.000
InterPro :
IPR022735 : Domain of unknown function DUF3585
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 11, nucl 10.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006418)
HIX0006418
HIT000599516 (
ENST00000496184
)
(MICAL-like protein 2.)
genome : 1,468,115 - 1,479,067 (10,953)
query : 1 - 2,722 (2,722/2,722)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 11, nucl 10.5, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006418)
HIX0006418
HIT000014848
(
AK074068
)
(Domain of unknown function DUF3585 domain containing protein.)
genome : 1,468,255 - 1,499,001 (30,747)
query : 1 - 5,250 (5,250/5,250)
16 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.988;0.999;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR022735 : Domain of unknown function DUF3585
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 12.5, mito 6, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006418)
HIX0006418
HIT000576494 (
ENST00000472100
)
(MICAL-like protein 2.)
genome : 1,468,255 - 1,499,001 (30,747)
query : 1 - 5,248 (5,248/5,248)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 12.5, mito 6, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006418)
HIX0006418
HIT000252799
(
AY358755
)
(Vegetative cell wall protein gp1; Hydroxyproline-rich glycoprotein 1; Precursor;)
genome : 1,473,995 - 1,475,398 (1,404)
query : 1 - 1,404 (1,404/1,451)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, extr 8, cyto 5, nucl 4, extr_plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006418)
HIX0006418
HIT000318864 (
NM_182924
)
(MICAL-like protein 2;)
genome : 1,473,995 - 1,499,109 (25,115)
query : 1 - 3,099 (3,099/3,144)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31, cyto_nucl 17
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006418)
HIX0006418
HIT000028616
(
AL833704
)
(MICAL-like protein 2.)
genome : 1,474,002 - 1,490,172 (16,171)
query : 1 - 3,046 (3,046/3,066)
16 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.993;0.997;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001715 : Calponin homology domain
IPR001781 : Zinc finger, LIM-type
GO :
0005515 : Molecular Function : protein binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006418)
HIX0006418
HIT000010398
(
AK027124
)
(MICAL-like protein 2.)
genome : 1,474,002 - 1,499,109 (25,108)
query : 1 - 2,456 (2,456/2,474)
13 exons
identity = 0.997
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
0.994;1.000;0.989;0.997;0.997;0.991)5'
coverage = 1.000
InterPro :
IPR022735 : Domain of unknown function DUF3585
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 13, mito 8, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006418)
HIX0006418
HIT000051982
(
BC037988
)
Representative transcript
(MICAL-like protein 2;)
genome : 1,474,002 - 1,499,086 (25,085)
query : 11 - 3,079 (3,069/3,097)
17 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.997;0.999;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.996
InterPro :
IPR001715 : Calponin homology domain
IPR001781 : Zinc finger, LIM-type
IPR022735 : Domain of unknown function DUF3585
GO :
0005515 : Molecular Function : protein binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006418)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK044547
Danio
sp. (Zebrafish) : BC047798
Danio
sp. (Zebrafish) : BC052767
Bos
sp. (Cow) : BC146098
Gallus
sp. (Chicken) : CR387701
Canis
sp. (Dog) : ENSCAFT00000002246
Monodelphis
sp. (Opossum) : ENSMODT00000011226
Oryzias
sp. (Medaka) : ENSORLT00000012785
Oryzias
sp. (Medaka) : ENSORLT00000018271
Pongo
sp. (Orangutan) : ENSPPYT00000020151
Rattus
sp. (Rat) : ENSRNOT00000036744
Macaca
sp. (Macaque) : XM_001100629
Pan
sp. (Chimpanzee) : XR_022773
HIX0006418
HIT000095939
(
BC039886
)
(MICAL-like protein 2.)
genome : 1,474,002 - 1,482,091 (8,090)
query : 7 - 1,499 (1,493/1,516)
11 exons
identity = 0.994
3'(1.000;0.894;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.985)5'
coverage = 0.995
InterPro :
IPR022735 : Domain of unknown function DUF3585
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 15, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006418)
HIX0006418
HIT000572383 (
ENST00000467783
)
(Non-protein coding transcript.)
genome : 1,473,995 - 1,479,658 (5,664)
query : 1 - 639 (639/639)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006418)
HIX0006418
HIT000505085 (
ENST00000405088
)
(MICAL-like protein 2.)
genome : 1,473,996 - 1,498,962 (24,967)
query : 1 - 2,315 (2,315/2,315)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 16, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006418)
HIX0006418
HIT000046681
(
AK126808
)
(MICAL-like protein 2.)
genome : 1,473,996 - 1,481,160 (7,165)
query : 1 - 2,080 (2,080/2,080)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.999)5'
coverage = 1.000
InterPro :
IPR022735 : Domain of unknown function DUF3585
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 13, mito 7, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006418)
HIX0006418
HIT000572006 (
ENST00000467394
)
(MICAL-like protein 2.)
genome : 1,473,996 - 1,481,160 (7,165)
query : 1 - 2,080 (2,080/2,080)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 13, mito 7, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006418)
HIX0006418
HIT000114825 (
ENST00000297508
)
(MICAL-like protein 2;)
genome : 1,474,002 - 1,499,138 (25,137)
query : 1 - 3,121 (3,121/3,121)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006418)
HIX0006418
HIT000511380 (
ENST00000413446
)
(MICAL-like protein 2.)
genome : 1,474,002 - 1,490,172 (16,171)
query : 1 - 3,046 (3,046/3,046)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006418)
HIX0006418
HIT000018116
(
AK093249
)
(MICAL-like protein 2.)
genome : 1,474,002 - 1,479,507 (5,506)
query : 1 - 1,857 (1,857/1,857)
8 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.997)5'
coverage = 1.000
InterPro :
IPR022735 : Domain of unknown function DUF3585
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, nucl 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006418)
HIX0006418
HIT000583089 (
ENST00000479007
)
(MICAL-like protein 2.)
genome : 1,474,002 - 1,479,507 (5,506)
query : 1 - 1,855 (1,855/1,855)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006418)
HIX0006418
HIT000576303 (
ENST00000471899
)
(MICAL-like protein 2.)
genome : 1,474,002 - 1,478,598 (4,597)
query : 1 - 899 (899/899)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 17, nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006418)
HIX0006418
HIT000575263 (
ENST00000470807
)
(MICAL-like protein 2.)
genome : 1,474,002 - 1,477,549 (3,548)
query : 1 - 668 (668/668)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 11, cyto 6.5, extr 5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006418)
HIX0006418
HIT000590900 (
ENST00000487187
)
(MICAL-like protein 2.)
genome : 1,476,379 - 1,478,794 (2,416)
query : 1 - 764 (764/764)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006418)
HIX0006418
HIT000565137 (
ENST00000460198
)
(MICAL-like protein 2.)
genome : 1,477,172 - 1,478,101 (930)
query : 1 - 533 (533/533)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006418)
HIX0006418
HIT000590871 (
ENST00000487156
)
(MICAL-like protein 2.)
genome : 1,478,561 - 1,480,363 (1,803)
query : 1 - 874 (874/874)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 14.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006418)
HIX0006418
HIT000586751 (
ENST00000482839
)
(MICAL-like protein 2.)
genome : 1,484,707 - 1,487,588 (2,882)
query : 1 - 852 (852/852)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006418)
HIX0006418
HIT000594159 (
ENST00000490608
)
(MICAL-like protein 2.)
genome : 1,486,293 - 1,487,669 (1,377)
query : 1 - 631 (631/631)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 9, cyto 9, cyto_nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006418)
HIX0167836
HIT000043863
(
AK123990
)
Representative transcript
(Conserved hypothetical protein.)
genome : 1,488,971 - 1,491,934 (2,964)
query : 1 - 2,964 (2,964/2,964)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 10, extr_plas 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167836)
HIX0006418
HIT000047212
(
AK127339
)
(Conserved hypothetical protein.)
genome : 1,489,157 - 1,493,787 (4,631)
query : 2 - 4,631 (4,630/4,631)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 12.5, cyto 10.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006418)
HIX0168583
HIT000543279 (
ENST00000445345
)
(Hypothetical short protein.)
genome : 1,499,573 - 1,503,644 (4,072)
query : 1 - 498 (498/498)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168583)
HIX0025420
HIT000048079
(
AK128206
)
Representative transcript
(Conserved hypothetical protein.)
genome : 1,504,131 - 1,507,158 (3,028)
query : 1 - 3,028 (3,028/3,028)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025420)
HIX0006419
HIT000086322
(
BC004286
)
(Integrator complex subunit 1.)
genome : 1,509,913 - 1,527,029 (17,117)
query : 1 - 4,147 (4,147/4,179)
29 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.978;1.000;1.000;
1.000;0.952;1.000;0.996;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 10, mito 6, cyto_nucl 6, plas 5, extr 4,
E.R._mito 4, cyto_mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006419)
HIX0006419
HIT000088100
(
BC013367
)
(Integrator complex subunit 1.)
genome : 1,509,913 - 1,519,251 (9,339)
query : 1 - 2,731 (2,731/2,760)
18 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.978;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 14.5, extr 3, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006419)
HIX0006419
HIT000398041 (
NM_001080453
)
(Integrator complex subunit 1; Int1;)
genome : 1,509,913 - 1,544,018 (34,106)
query : 1 - 6,974 (6,974/7,000)
48 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.978;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 28, cyto 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006419)
HIX0006419
HIT000263416
(
BC069262
)
(Integrator complex subunit 1.)
genome : 1,509,913 - 1,520,550 (10,638)
query : 1 - 3,004 (3,004/3,030)
20 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.978;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 18, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006419)
HIX0006419
HIT000089710
(
BC018777
)
(Integrator complex subunit 1.)
genome : 1,509,913 - 1,518,143 (8,231)
query : 13 - 2,397 (2,385/2,418)
16 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.978;1.000;1.000;
1.000;1.000)5'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 14, extr 6, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006419)
HIX0006419
HIT000023993
(
AL050110
)
(Integrator complex subunit 1.)
genome : 1,509,913 - 1,517,532 (7,620)
query : 22 - 2,224 (2,203/2,241)
15 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.978;1.000;1.000;
1.000)5'
coverage = 0.990
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, extr 11, cyto_nucl 9, cyto 2.5, mito 2,
E.R. 2, E.R._mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006419)
HIX0006419
HIT000025646
(
AL137358
)
(Integrator complex subunit 1.)
genome : 1,509,913 - 1,513,885 (3,973)
query : 1 - 1,126 (1,126/1,141)
8 exons
identity = 0.989
3'(0.976;1.000;0.989;1.000;1.000;0.991;1.000;
1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 9.83333, nucl 9.5, cyto 5,
cyto_pero 3.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006419)
HIX0006419
HIT000252526
(
AY358482
)
(Integrator complex subunit 1.)
genome : 1,509,913 - 1,523,480 (13,568)
query : 1 - 3,435 (3,435/3,437)
23 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.992;1.000;0.978;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25.5, extr_plas 14, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006419)
HIX0006419
HIT000396378 (
ENST00000389470
)
(Integrator complex subunit 1.)
genome : 1,509,913 - 1,545,489 (35,577)
query : 1 - 7,485 (7,485/7,485)
49 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 27, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006419)
HIX0006419
HIT000504969 (
ENST00000404767
)
(Integrator complex subunit 1; Int1;)
genome : 1,509,913 - 1,544,003 (34,091)
query : 1 - 6,959 (6,959/6,959)
48 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.978;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 28, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006419)
HIX0006419
HIT000001155
(
AB037861
)
Representative transcript
(Integrator complex subunit 1.)
genome : 1,509,913 - 1,527,472 (17,560)
query : 1 - 4,434 (4,434/4,434)
30 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.993;1.000;1.000;0.978;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 9.5, cyto_nucl 9.5, nucl 8.5, plas 4.5,
extr_plas 4.5, extr 3.5, mito 2, pero 2, mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006419)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AB257854
Canis
sp. (Dog) : ENSCAFT00000026189
Equus
sp. (Horse) : ENSECAT00000012133
Oryzias
sp. (Medaka) : ENSORLT00000005960
Pongo
sp. (Orangutan) : ENSPPYT00000020153
Rattus
sp. (Rat) : ENSRNOT00000001725
Takifugu
sp. (Fugu) : SINFRUT00000148292
Bos
sp. (Cow) : XM_001256697
Monodelphis
sp. (Opossum) : XM_001367495
Gallus
sp. (Chicken) : XM_414768
Danio
sp. (Zebrafish) : XM_685530
Macaca
sp. (Macaque) : XR_012533
Pan
sp. (Chimpanzee) : XR_022809
HIX0006419
HIT000596882 (
ENST00000493446
)
(Integrator complex subunit 1.)
genome : 1,510,114 - 1,512,761 (2,648)
query : 1 - 675 (675/675)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 16.5, cyto 9.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006419)
HIX0006419
HIT000587097 (
ENST00000483196
)
(Integrator complex subunit 1.)
genome : 1,510,769 - 1,512,786 (2,018)
query : 1 - 386 (386/386)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, extr 12, cyto_nucl 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006419)
HIX0006419
HIT000583720 (
ENST00000479671
)
(Non-protein coding transcript.)
genome : 1,510,807 - 1,511,397 (591)
query : 1 - 245 (245/245)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006419)
HIX0006419
HIT000048352
(
AK128479
)
(Integrator complex subunit 1.)
genome : 1,511,957 - 1,517,251 (5,295)
query : 1 - 1,264 (1,264/1,264)
10 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.978;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006419)
HIX0006419
HIT000586901 (
ENST00000482994
)
(Integrator complex subunit 1.)
genome : 1,513,836 - 1,515,786 (1,951)
query : 1 - 498 (498/498)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 10.1667, nucl 10, cyto 8,
cyto_pero 5.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006419)
HIX0006419
HIT000048241
(
AK128368
)
(Integrator complex subunit 1.)
genome : 1,521,914 - 1,533,503 (11,590)
query : 1 - 3,051 (3,051/3,051)
12 exons
identity = 0.999
3'(0.999;1.000;0.990;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
pero 8.5, extr 8, cyto 7, mito_pero 5.5, plas 3,
nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006419)
HIX0006419
HIT000572695 (
ENST00000468115
)
(Integrator complex subunit 1.)
genome : 1,521,914 - 1,533,503 (11,590)
query : 1 - 3,051 (3,051/3,051)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
pero 8.5, extr 8, cyto 7, mito_pero 5.5, plas 3,
nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006419)
HIX0006419
HIT000600285 (
ENST00000496988
)
(Integrator complex subunit 1.)
genome : 1,534,092 - 1,535,848 (1,757)
query : 1 - 421 (421/421)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, mito 5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006419)
HIX0006419
HIT000596966 (
ENST00000493531
)
(Integrator complex subunit 1.)
genome : 1,539,164 - 1,540,915 (1,752)
query : 1 - 828 (828/828)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 14.5, cyto_mito 14.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006419)
HIX0168127
HIT000514034 (
ENST00000416100
)
(Non-protein coding transcript.)
genome : 1,548,291 - 1,549,063 (773)
query : 1 - 242 (242/242)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0168127)
HIX0217676
pHIT000079381 ( pHIT000079381 )
(Conserved hypothetical protein.)
genome : 1,569,222 - 1,580,011 (10,790)
query : 1 - 591 (591/591)
3 exons
InterPro :
IPR004826 : Basic leucine zipper domain, Maf-type
IPR004827 : Basic-leucine zipper domain
IPR008917 : Transcription factor, Skn-1-like, DNA-binding domain
IPR024874 : Transcription factor Maf
IPR028574 : Transcription factor MafK
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217676)
CAGE tag :
H09BA27K2107
HIX0025372
HIT000044866
(
AK124993
)
Representative transcript
(Conserved hypothetical protein.)
genome : 1,572,089 - 1,574,516 (2,428)
query : 1 - 2,428 (2,428/2,428)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 7, nucl 3, cyto 3, cyto_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025372)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : ENSPTRT00000034818
HIX0217676
HIT000505493 (
ENST00000406174
)
(Transcription factor Maf family protein.)
genome : 1,578,344 - 1,580,009 (1,666)
query : 1 - 632 (632/632)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217676)
HIX0217676
HIT000503280
(
BC148265
)
Representative transcript
(Transcription factor Maf family protein.)
genome : 1,578,829 - 1,580,011 (1,183)
query : 23 - 493 (471/511)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.922
InterPro :
IPR004826 : Basic leucine zipper domain, Maf-type
IPR004827 : Basic-leucine zipper domain
IPR008917 : Transcription factor, Skn-1-like, DNA-binding domain
IPR024874 : Transcription factor Maf
IPR028574 : Transcription factor MafK
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217676)
HIX0217676
HIT000435989
(
BC152387
)
(Transcription factor Maf family protein.)
genome : 1,578,829 - 1,580,009 (1,181)
query : 4 - 472 (469/475)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.987
InterPro :
IPR004826 : Basic leucine zipper domain, Maf-type
IPR004827 : Basic-leucine zipper domain
IPR008917 : Transcription factor, Skn-1-like, DNA-binding domain
IPR024874 : Transcription factor Maf
IPR028574 : Transcription factor MafK
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217676)
HIX0217528
HIT000013381
(
AK056767
)
Representative transcript
(Conserved hypothetical protein.)
genome : 1,580,469 - 1,582,678 (2,210)
query : 9 - 2,218 (2,210/2,218)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 12, nucl 2.5, cyto_nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217528)
HIX0217528
HIT000026825
(
AL831913
)
(Conserved hypothetical protein.)
genome : 1,580,621 - 1,582,684 (2,064)
query : 10 - 2,072 (2,063/2,090)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 6, cyto_pero 4.5, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217528)
HIX0217528
HIT000035944
(
BC012777
)
(Hypothetical short protein.)
genome : 1,581,073 - 1,582,679 (1,607)
query : 1 - 1,607 (1,607/1,669)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 18, extr 7, lyso 3, plas 1, nucl 1, cyto 1,
cyto_nucl 1, pero 1, cyto_pero 1, cyto_plas 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217528)
HIX0217528
HIT000335172
(
BC094871
)
(Hypothetical short protein.)
genome : 1,581,414 - 1,582,679 (1,266)
query : 1 - 1,266 (1,266/1,308)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 18, extr 7, lyso 3, plas 1, nucl 1, cyto 1,
cyto_nucl 1, pero 1, cyto_pero 1, cyto_plas 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217528)
HIX0006421
HIT000485145 (
NM_001097620
)
(Transmembrane protein 184B isoform b.)
genome : 1,581,871 - 1,596,066 (14,196)
query : 1 - 6,276 (6,276/6,293)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006421)
HIX0006421
HIT000046185
(
AK126312
)
(Transmembrane protein 184B isoform b.)
genome : 1,583,450 - 1,595,747 (12,298)
query : 1 - 4,497 (4,497/4,497)
8 exons
identity = 0.996
3'(0.995;1.000;1.000;1.000;1.000;0.994;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR005178 : Organic solute transporter subunit alpha/Transmembrane protein 184
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 20.5, extr_plas 12, mito 3, extr 2.5,
cyto_mito 2.5, mito_nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006421)
HIX0006421
HIT000021672
(
AK096817
)
(Conserved hypothetical protein.)
genome : 1,583,450 - 1,585,885 (2,436)
query : 1 - 2,224 (2,224/2,224)
2 exons
identity = 0.995
3'(0.994;0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 10, mito 6, extr 5, cyto 3.5,
E.R._mito 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006421)
HIX0006421
HIT000547889 (
ENST00000449955
)
(Conserved hypothetical protein.)
genome : 1,583,450 - 1,585,885 (2,436)
query : 1 - 2,224 (2,224/2,224)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 10, mito 6, extr 5, cyto 3.5,
E.R._mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006421)
HIX0006421
HIT000519930 (
ENST00000421996
)
(Hypothetical short protein.)
genome : 1,583,466 - 1,585,415 (1,950)
query : 1 - 409 (409/409)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006421)
HIX0006421
HIT000250013
(
AK172850
)
Representative transcript
(Transmembrane protein 184B isoform b.)
genome : 1,585,865 - 1,595,842 (9,978)
query : 1 - 2,058 (2,058/2,154)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR005178 : Organic solute transporter subunit alpha/Transmembrane protein 184
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006421)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK050489
HIX0006421
HIT000114816 (
ENST00000297477
)
(Transmembrane protein 184B isoform b.)
genome : 1,585,796 - 1,596,066 (10,271)
query : 1 - 2,351 (2,351/2,351)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006421)
HIX0006421
HIT000040224
(
BC026694
)
(Transmembrane protein 184B isoform b.)
genome : 1,585,865 - 1,595,841 (9,977)
query : 1 - 2,060 (2,060/2,081)
9 exons
identity = 0.997
3'(0.995;1.000;1.000;1.000;1.000;1.000;1.000;
0.995;0.989)5'
coverage = 1.000
InterPro :
IPR005178 : Organic solute transporter subunit alpha/Transmembrane protein 184
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006421)
HIX0006421
HIT000121905 (
ENST00000319018
)
(Transmembrane protein 184B isoform b.)
genome : 1,585,862 - 1,595,819 (9,958)
query : 1 - 1,962 (1,962/1,962)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, plas 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006421)
HIX0006421
HIT000082078
(
AK075043
)
(Transmembrane protein 184B isoform b.)
genome : 1,585,864 - 1,595,928 (10,065)
query : 2 - 2,144 (2,143/2,144)
9 exons
identity = 0.993
3'(0.994;1.000;0.994;1.000;0.987;1.000;0.976;
1.000;0.989)5'
coverage = 1.000
InterPro :
IPR005178 : Organic solute transporter subunit alpha/Transmembrane protein 184
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006421)
HIX0006421
HIT000021645
(
AK096790
)
(Transmembrane protein 184B isoform b.)
genome : 1,585,865 - 1,590,566 (4,702)
query : 1 - 2,843 (2,843/2,843)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR005178 : Organic solute transporter subunit alpha/Transmembrane protein 184
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, plas 6, nucl 3.5, cyto_nucl 3.5, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006421)
HIX0006421
HIT000573098 (
ENST00000468535
)
(Transmembrane protein 184B isoform b.)
genome : 1,585,865 - 1,590,566 (4,702)
query : 1 - 2,843 (2,843/2,843)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, plas 6, nucl 3.5, cyto_nucl 3.5, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006421)
HIX0006421
HIT000432115
(
AK313249
)
(Transmembrane protein 184B isoform b.)
genome : 1,586,588 - 1,595,853 (9,266)
query : 1 - 1,346 (1,346/1,346)
9 exons
identity = 0.992
3'(0.983;1.000;0.994;1.000;1.000;1.000;0.982;
0.991;0.990)5'
coverage = 1.000
InterPro :
IPR005178 : Organic solute transporter subunit alpha/Transmembrane protein 184
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006421)
HIX0006421
HIT000121900 (
ENST00000319010
)
(Transmembrane protein 184B isoform b.)
genome : 1,588,285 - 1,595,873 (7,589)
query : 1 - 866 (866/866)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006421)
HIX0006421
HIT000579090 (
ENST00000474813
)
(Transmembrane protein 184B isoform b.)
genome : 1,589,114 - 1,595,108 (5,995)
query : 1 - 1,008 (1,008/1,008)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006421)
HIX0006421
HIT000519857 (
ENST00000421923
)
(Transmembrane protein 184B isoform b.)
genome : 1,589,534 - 1,600,457 (10,924)
query : 1 - 744 (744/744)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, mito 5, plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006421)
HIX0006421
HIT000512664 (
ENST00000414730
)
(Transmembrane protein 184B isoform b.)
genome : 1,589,784 - 1,595,167 (5,384)
query : 1 - 574 (574/574)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, plas 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006421)
HIX0006421
HIT000539867 (
ENST00000441933
)
(Transmembrane protein 184B isoform b.)
genome : 1,589,941 - 1,595,756 (5,816)
query : 1 - 640 (640/640)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 14, plas 12, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006421)
HIX0006421
HIT000529142 (
ENST00000431208
)
(Transmembrane protein 184B isoform b.)
genome : 1,589,998 - 1,600,457 (10,460)
query : 1 - 579 (579/579)
4 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, plas 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006421)
HIX0017594
HIT000028475
(
AL833563
)
(cAMP-dependent protein kinase type I-beta regulatory subunit;)
genome : 588,835 - 752,743 (163,909)
query : 2 - 2,453 (2,452/2,471)
11 exons
identity = 0.997
3'(0.996;1.000;0.992;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000595 : Cyclic nucleotide-binding domain
IPR002373 : cAMP/cGMP-dependent protein kinase
IPR003117 : Dimerization-anchoring domain of cAMP-dependent protein kinase, regulatory subunit
IPR014710 : RmlC-like jelly roll fold
IPR018488 : Cyclic nucleotide-binding, conserved site
IPR018490 : Cyclic nucleotide-binding-like
GO :
0001932 : Biological Process : regulation of protein phosphorylation
0005952 : Cellular Component : cAMP-dependent protein kinase complex
0008603 : Molecular Function : cAMP-dependent protein kinase regulator activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017594)
HIX0017594
HIT000088101
(
BC013368
)
(CAMP-dependent protein kinase type I-beta regulatory subunit.)
genome : 588,835 - 751,055 (162,221)
query : 1 - 2,292 (2,292/2,310)
10 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000595 : Cyclic nucleotide-binding domain
IPR002373 : cAMP/cGMP-dependent protein kinase
IPR003117 : Dimerization-anchoring domain of cAMP-dependent protein kinase, regulatory subunit
IPR014710 : RmlC-like jelly roll fold
IPR018488 : Cyclic nucleotide-binding, conserved site
IPR018490 : Cyclic nucleotide-binding-like
GO :
0001932 : Biological Process : regulation of protein phosphorylation
0005952 : Cellular Component : cAMP-dependent protein kinase complex
0008603 : Molecular Function : cAMP-dependent protein kinase regulator activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 15.5, nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017594)
HIX0017594
HIT000654109 (
NM_001164758
)
(cAMP-dependent protein kinase type I-beta regulatory subunit;)
genome : 588,834 - 767,313 (178,480)
query : 1 - 2,488 (2,488/2,488)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 14
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017594)
HIX0017594
HIT000636429 (
ENST00000537384
)
(cAMP-dependent protein kinase type I-beta regulatory subunit;)
genome : 588,834 - 766,978 (178,145)
query : 1 - 2,533 (2,533/2,533)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017594)
HIX0017594
HIT000654111 (
NM_001164760
)
(cAMP-dependent protein kinase type I-beta regulatory subunit;)
genome : 588,834 - 766,978 (178,145)
query : 1 - 2,533 (2,533/2,533)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 14
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017594)
HIX0017594
HIT000654112 (
NM_001164761
)
(cAMP-dependent protein kinase type I-beta regulatory subunit;)
genome : 588,834 - 752,844 (164,011)
query : 1 - 2,554 (2,554/2,554)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 14
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017594)
HIX0017594
HIT000643980 (
ENST00000544935
)
(cAMP-dependent protein kinase type I-beta regulatory subunit;)
genome : 588,834 - 752,577 (163,744)
query : 1 - 2,494 (2,494/2,494)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017594)
HIX0017594
HIT000654113 (
NM_001164762
)
(cAMP-dependent protein kinase type I-beta regulatory subunit;)
genome : 588,834 - 752,577 (163,744)
query : 1 - 2,494 (2,494/2,494)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 14
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017594)
HIX0017594
HIT000316951 (
NM_002735
)
(cAMP-dependent protein kinase type I-beta regulatory subunit;)
genome : 588,834 - 752,161 (163,328)
query : 1 - 2,512 (2,512/2,512)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 14
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017594)
HIX0017594
HIT000654110 (
NM_001164759
)
(cAMP-dependent protein kinase type I-beta regulatory subunit;)
genome : 588,834 - 751,166 (162,333)
query : 21 - 2,423 (2,403/2,423)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.992
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 14
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017594)
HIX0017594
HIT000505735 (
ENST00000406797
)
(cAMP-dependent protein kinase type I-beta regulatory subunit;)
genome : 588,835 - 752,844 (164,010)
query : 1 - 2,553 (2,553/2,553)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017594)
HIX0017594
HIT000196159
(
M65066
)
(CAMP-dependent protein kinase type I-beta regulatory subunit.)
genome : 588,837 - 751,140 (162,304)
query : 1 - 2,366 (2,366/2,366)
10 exons
identity = 0.990
3'(0.985;1.000;0.984;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000595 : Cyclic nucleotide-binding domain
IPR002373 : cAMP/cGMP-dependent protein kinase
IPR003117 : Dimerization-anchoring domain of cAMP-dependent protein kinase, regulatory subunit
IPR014710 : RmlC-like jelly roll fold
IPR018488 : Cyclic nucleotide-binding, conserved site
IPR018490 : Cyclic nucleotide-binding-like
GO :
0001932 : Biological Process : regulation of protein phosphorylation
0005952 : Cellular Component : cAMP-dependent protein kinase complex
0008603 : Molecular Function : cAMP-dependent protein kinase regulator activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15.5, nucl 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017594)
HIX0017594
HIT000091289
(
BC026734
)
Representative transcript
(cAMP-dependent protein kinase type I-beta regulatory subunit;)
genome : 589,379 - 767,287 (177,909)
query : 1 - 1,917 (1,917/1,917)
11 exons
identity = 0.999
3'(1.000;1.000;0.992;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000595 : Cyclic nucleotide-binding domain
IPR002373 : cAMP/cGMP-dependent protein kinase
IPR003117 : Dimerization-anchoring domain of cAMP-dependent protein kinase, regulatory subunit
IPR014710 : RmlC-like jelly roll fold
IPR018488 : Cyclic nucleotide-binding, conserved site
IPR018490 : Cyclic nucleotide-binding-like
GO :
0001932 : Biological Process : regulation of protein phosphorylation
0005952 : Cellular Component : cAMP-dependent protein kinase complex
0008603 : Molecular Function : cAMP-dependent protein kinase regulator activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017594)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK158994
Danio
sp. (Zebrafish) : BC093222
Rattus
sp. (Rat) : BC104679
Gallus
sp. (Chicken) : BX931280
Tetraodon
sp. (Tetraodon) : CR715713
Danio
sp. (Zebrafish) : ENSDART00000104804
Oryzias
sp. (Medaka) : ENSORLT00000010585
Takifugu
sp. (Fugu) : SINFRUT00000134736
Macaca
sp. (Macaque) : XM_001083948
Monodelphis
sp. (Opossum) : XM_001367311
Equus
sp. (Horse) : XM_001489025
Canis
sp. (Dog) : XM_850911
HIX0017594
HIT000504531 (
ENST00000403562
)
(cAMP-dependent protein kinase type I-beta regulatory subunit;)
genome : 589,379 - 767,287 (177,909)
query : 1 - 1,917 (1,917/1,917)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017594)
HIX0017594
HIT000313687 (
ENST00000360274
)
(cAMP-dependent protein kinase type I-beta regulatory subunit;)
genome : 589,387 - 752,209 (162,823)
query : 1 - 2,007 (2,007/2,007)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017594)
HIX0017594
HIT000094637
(
BC036828
)
(cAMP-dependent protein kinase type I-beta regulatory subunit;)
genome : 589,387 - 752,133 (162,747)
query : 1 - 1,932 (1,932/1,932)
11 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.988)5'
coverage = 1.000
InterPro :
IPR000595 : Cyclic nucleotide-binding domain
IPR002373 : cAMP/cGMP-dependent protein kinase
IPR003117 : Dimerization-anchoring domain of cAMP-dependent protein kinase, regulatory subunit
IPR014710 : RmlC-like jelly roll fold
IPR018488 : Cyclic nucleotide-binding, conserved site
IPR018490 : Cyclic nucleotide-binding-like
GO :
0001932 : Biological Process : regulation of protein phosphorylation
0005952 : Cellular Component : cAMP-dependent protein kinase complex
0008603 : Molecular Function : cAMP-dependent protein kinase regulator activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017594)
HIX0017594
HIT000422261
(
AK289464
)
(cAMP-dependent protein kinase type I-beta regulatory subunit;)
genome : 589,778 - 752,084 (162,307)
query : 1 - 1,491 (1,491/1,491)
11 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000595 : Cyclic nucleotide-binding domain
IPR002373 : cAMP/cGMP-dependent protein kinase
IPR003117 : Dimerization-anchoring domain of cAMP-dependent protein kinase, regulatory subunit
IPR014710 : RmlC-like jelly roll fold
IPR018488 : Cyclic nucleotide-binding, conserved site
IPR018490 : Cyclic nucleotide-binding-like
GO :
0001932 : Biological Process : regulation of protein phosphorylation
0005952 : Cellular Component : cAMP-dependent protein kinase complex
0008603 : Molecular Function : cAMP-dependent protein kinase regulator activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017594)
HIX0017594
HIT000491961
(
AK297337
)
(cAMP-dependent protein kinase type I-beta regulatory subunit;)
genome : 589,841 - 752,113 (162,273)
query : 1 - 1,457 (1,457/1,457)
11 exons
identity = 0.997
3'(0.990;0.988;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000595 : Cyclic nucleotide-binding domain
IPR002373 : cAMP/cGMP-dependent protein kinase
IPR003117 : Dimerization-anchoring domain of cAMP-dependent protein kinase, regulatory subunit
IPR014710 : RmlC-like jelly roll fold
IPR018488 : Cyclic nucleotide-binding, conserved site
IPR018490 : Cyclic nucleotide-binding-like
GO :
0001932 : Biological Process : regulation of protein phosphorylation
0005952 : Cellular Component : cAMP-dependent protein kinase complex
0008603 : Molecular Function : cAMP-dependent protein kinase regulator activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017594)
HIX0017594
HIT000499603
(
AK315990
)
(cAMP-dependent protein kinase type I-beta regulatory subunit;)
genome : 589,885 - 752,774 (162,890)
query : 1 - 1,433 (1,433/1,433)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000595 : Cyclic nucleotide-binding domain
IPR002373 : cAMP/cGMP-dependent protein kinase
IPR003117 : Dimerization-anchoring domain of cAMP-dependent protein kinase, regulatory subunit
IPR014710 : RmlC-like jelly roll fold
IPR018488 : Cyclic nucleotide-binding, conserved site
IPR018490 : Cyclic nucleotide-binding-like
GO :
0001932 : Biological Process : regulation of protein phosphorylation
0005952 : Cellular Component : cAMP-dependent protein kinase complex
0008603 : Molecular Function : cAMP-dependent protein kinase regulator activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017594)
HIX0017594
HIT000499564
(
AK315951
)
(cAMP-dependent protein kinase type I-beta regulatory subunit;)
genome : 590,042 - 752,161 (162,120)
query : 13 - 1,316 (1,304/1,316)
11 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.989;1.000;1.000;1.000)5'
coverage = 0.991
InterPro :
IPR000595 : Cyclic nucleotide-binding domain
IPR002373 : cAMP/cGMP-dependent protein kinase
IPR003117 : Dimerization-anchoring domain of cAMP-dependent protein kinase, regulatory subunit
IPR014710 : RmlC-like jelly roll fold
IPR018488 : Cyclic nucleotide-binding, conserved site
IPR018490 : Cyclic nucleotide-binding-like
GO :
0001932 : Biological Process : regulation of protein phosphorylation
0005952 : Cellular Component : cAMP-dependent protein kinase complex
0008603 : Molecular Function : cAMP-dependent protein kinase regulator activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017594)
HIX0017594
HIT000527974 (
ENST00000430040
)
(CAMP-dependent protein kinase type I-beta regulatory subunit.)
genome : 618,893 - 752,577 (133,685)
query : 1 - 1,006 (1,006/1,006)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 14, nucl 11.5, plas 2, cysk 2,
cysk_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017594)
HIX0017594
HIT000515786 (
ENST00000417852
)
(CAMP-dependent protein kinase type I-beta regulatory subunit.)
genome : 647,033 - 766,978 (119,946)
query : 1 - 651 (651/651)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 12.5, nucl 8.5, plas 2, extr 2,
cysk 2, extr_plas 2, cysk_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017594)
HIX0017594
HIT000554630 (
ENST00000456696
)
(CAMP-dependent protein kinase type I-beta regulatory subunit.)
genome : 720,193 - 752,706 (32,514)
query : 1 - 518 (518/518)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 14, cyto 10, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017594)
HIX0006406
HIT000554692 (
ENST00000456758
)
(SUN domain-containing protein 1 isoform a.)
genome : 855,528 - 914,557 (59,030)
query : 1 - 4,514 (4,514/4,514)
25 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 11, nucl 8, plas 6.5, cyto_pero 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006406)
HIX0006406
HIT000317589 (
NM_025154
)
(SUN domain-containing protein 1; Protein unc-84 homolog A; Sad1/unc-84 protein-like 1;)
genome : 856,252 - 914,557 (58,306)
query : 1 - 3,830 (3,830/3,840)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 11, plas 7, nucl 6, E.R._mito 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006406)
HIX0006406
HIT000654857 (
NM_001171944
)
(SUN domain-containing protein 1; Protein unc-84 homolog A; Sad1/unc-84 protein-like 1;)
genome : 856,252 - 914,557 (58,306)
query : 1 - 3,717 (3,717/3,727)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 9, plas 5.5, pero 5,
extr_plas 3.5, mito_pero 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006406)
HIX0006406
HIT000550717 (
ENST00000452783
)
(SUN domain-containing protein 1; Protein unc-84 homolog A; Sad1/unc-84 protein-like 1;)
genome : 856,252 - 914,557 (58,306)
query : 1 - 3,717 (3,717/3,717)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 9, plas 5.5, pero 5,
extr_plas 3.5, mito_pero 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006406)
HIX0006406
HIT000396482 (
ENST00000389574
)
(SUN domain-containing protein 1; Protein unc-84 homolog A; Sad1/unc-84 protein-like 1;)
genome : 856,252 - 914,539 (58,288)
query : 1 - 3,812 (3,812/3,812)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 11, plas 7, nucl 6, E.R._mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006406)
HIX0006406
HIT000006090
(
AK022816
)
(SUN domain-containing protein 1 isoform a.)
genome : 856,261 - 914,539 (58,279)
query : 2 - 3,804 (3,803/3,804)
18 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.995;1.000;1.000;0.985;1.000;1.000;
1.000;0.994;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR012919 : SUN domain
IPR018539 : SUN domain-containing protein 1
GO :
0005639 : Cellular Component : integral component of nuclear inner membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 9.5, plas 9, cyto_nucl 8.5, cyto 6.5, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006406)
HIX0006406
HIT000497520
(
AK302896
)
(SUN domain-containing protein 1; Protein unc-84 homolog A; Sad1/unc-84 protein-like 1;)
genome : 856,280 - 913,248 (56,969)
query : 1 - 2,380 (2,380/2,380)
17 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.985;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR012919 : SUN domain
IPR018539 : SUN domain-containing protein 1
GO :
0005639 : Cellular Component : integral component of nuclear inner membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 9, plas 5.5, pero 5,
extr_plas 3.5, mito_pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006406)
HIX0006406
HIT000054993
(
BX538211
)
(SUN domain-containing protein 1 isoform b.)
genome : 856,284 - 914,539 (58,256)
query : 2 - 1,798 (1,797/1,816)
5 exons
identity = 0.996
5'(1.000;0.990;0.995;1.000;0.997)3'
coverage = 0.999
InterPro :
IPR018539 : SUN domain-containing protein 1
GO :
0005639 : Cellular Component : integral component of nuclear inner membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 12.5, extr 8, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006406)
HIX0006406
HIT000005743
(
AK022469
)
(SUN domain-containing protein 1; Protein unc-84 homolog A; Sad1/unc-84 protein-like 1;)
genome : 856,284 - 890,404 (34,121)
query : 1 - 2,151 (2,151/2,151)
8 exons
identity = 0.997
5'(1.000;1.000;1.000;0.995;1.000;1.000;1.000;
0.996)3'
coverage = 1.000
InterPro :
IPR018539 : SUN domain-containing protein 1
GO :
0005639 : Cellular Component : integral component of nuclear inner membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 14, extr_plas 10.5, nucl 6, extr 5, mito 2,
E.R. 2, E.R._mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006406)
HIX0006406
HIT000435956
(
BC151827
)
Representative transcript
(SUN domain-containing protein 1; Protein unc-84 homolog A; Sad1/unc-84 protein-like 1;)
genome : 856,286 - 914,539 (58,254)
query : 1 - 4,510 (4,510/4,608)
22 exons
identity = 0.999
5'(1.000;1.000;0.995;0.995;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.997;1.000;1.000;
1.000;0.992;1.000;1.000;1.000;0.994;1.000;
0.999)3'
coverage = 1.000
InterPro :
IPR018539 : SUN domain-containing protein 1
GO :
0005639 : Cellular Component : integral component of nuclear inner membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10, plas 6.5, cyto_mito 6.5, pero 5, nucl 4,
extr_plas 4, mito_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006406)
HIX0006406
HIT000436009
(
BC152418
)
(SUN domain-containing protein 1; Protein unc-84 homolog A; Sad1/unc-84 protein-like 1;)
genome : 872,138 - 914,539 (42,402)
query : 14 - 4,047 (4,034/4,065)
20 exons
identity = 0.992
5'(1.000;1.000;0.995;1.000;0.994;0.730;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.992
InterPro :
IPR012919 : SUN domain
IPR018539 : SUN domain-containing protein 1
GO :
0005639 : Cellular Component : integral component of nuclear inner membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 16, cyto_nucl 9.83333, cyto_mito 9.83333,
plas 5.5, pero 4, extr_plas 3.5, nucl 2.5, mito 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006406)
HIX0006406
HIT000000535
(
AB018353
)
(SUN domain-containing protein 1; Protein unc-84 homolog A; Sad1/unc-84 protein-like 1;)
genome : 872,138 - 914,539 (42,402)
query : 14 - 4,047 (4,034/4,047)
20 exons
identity = 0.992
5'(1.000;1.000;0.995;1.000;0.994;0.730;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.997
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 16, cyto_nucl 9.83333, cyto_mito 9.83333,
plas 5.5, pero 4, extr_plas 3.5, nucl 2.5, mito 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006406)
HIX0006406
HIT000435410
(
BC142707
)
(SUN domain-containing protein 1 isoform d.)
genome : 872,138 - 914,539 (42,402)
query : 7 - 3,959 (3,953/4,025)
19 exons
identity = 0.999
5'(1.000;0.995;0.995;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.992;1.000;
1.000;1.000;0.994;1.000;0.999)3'
coverage = 0.998
InterPro :
IPR012919 : SUN domain
IPR018539 : SUN domain-containing protein 1
GO :
0005639 : Cellular Component : integral component of nuclear inner membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15, cyto_mito 9.33333, cyto_nucl 8.83333,
plas 5.5, pero 5, extr_plas 3.5, mito 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006406)
HIX0006406
HIT000503790 (
ENST00000401592
)
(SUN domain-containing protein 1; Protein unc-84 homolog A; Sad1/unc-84 protein-like 1;)
genome : 872,138 - 914,539 (42,402)
query : 1 - 3,953 (3,953/3,953)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15, cyto_mito 9.33333, cyto_nucl 8.83333,
plas 5.5, pero 5, extr_plas 3.5, mito 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006406)
HIX0006406
HIT000511105 (
ENST00000413171
)
(SUN domain-containing protein 1 isoform b.)
genome : 872,138 - 914,539 (42,402)
query : 1 - 4,488 (4,488/4,488)
21 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 11, plas 6.5, nucl 4, pero 4, extr_plas 4,
mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006406)
HIX0006406
HIT000505159 (
ENST00000405266
)
(SUN domain-containing protein 1; Protein unc-84 homolog A; Sad1/unc-84 protein-like 1;)
genome : 872,138 - 914,537 (42,400)
query : 1 - 4,062 (4,062/4,062)
20 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 16, cyto_nucl 9.83333, cyto_mito 9.83333,
plas 5.5, pero 4, extr_plas 3.5, nucl 2.5, mito 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006406)
HIX0006406
HIT000133556 (
ENST00000340926
)
(SUN domain-containing protein 1; Protein unc-84 homolog A; Sad1/unc-84 protein-like 1;)
genome : 872,138 - 890,404 (18,267)
query : 1 - 2,128 (2,128/2,128)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 14, extr_plas 10.5, nucl 6, extr 5, mito 2,
E.R. 2, E.R._mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006406)
HIX0006406
HIT000559822 (
NM_001130965
)
(SUN domain-containing protein 1; Protein unc-84 homolog A; Sad1/unc-84 protein-like 1;)
genome : 872,142 - 914,557 (42,416)
query : 1 - 3,967 (3,967/3,977)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15, cyto_mito 9.33333, cyto_nucl 8.83333,
plas 5.5, pero 5, extr_plas 3.5, mito 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006406)
HIX0006406
HIT000523341 (
ENST00000425407
)
(SUN domain-containing protein 1 isoform b.)
genome : 872,142 - 914,557 (42,416)
query : 1 - 3,868 (3,868/3,868)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15, cyto_nucl 9.33333, cyto_mito 9.33333,
plas 5.5, pero 5, extr_plas 3.5, nucl 2.5, mito 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006406)
HIX0006406
HIT000548815 (
ENST00000450881
)
(SUN domain-containing protein 1; Protein unc-84 homolog A; Sad1/unc-84 protein-like 1;)
genome : 878,433 - 892,288 (13,856)
query : 1 - 513 (513/513)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 14.5, cyto 13.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006406)
HIX0006406
HIT000517246 (
ENST00000419312
)
(SUN domain-containing protein 1; Protein unc-84 homolog A; Sad1/unc-84 protein-like 1;)
genome : 882,978 - 891,118 (8,141)
query : 1 - 473 (473/473)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, extr 9, cyto 6, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006406)
HIX0006406
HIT000057716
(
BX649069
)
(SUN domain-containing protein 1 isoform a.)
genome : 883,007 - 914,533 (31,527)
query : 1 - 3,698 (3,698/3,715)
17 exons
identity = 0.999
5'(1.000;1.000;0.988;1.000;1.000;1.000;1.000;
0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR012919 : SUN domain
IPR018539 : SUN domain-containing protein 1
GO :
0005639 : Cellular Component : integral component of nuclear inner membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8.5, cyto_nucl 8, nucl 6.5, pero 5, E.R._mito 5,
E.R. 4.5, plas 3, mito 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006406)
HIX0006406
HIT000527112 (
ENST00000429178
)
(SUN domain-containing protein 1 isoform a.)
genome : 883,007 - 914,536 (31,530)
query : 1 - 3,701 (3,701/3,701)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 8.5, cyto_nucl 8, nucl 6.5, pero 5, E.R._mito 5,
E.R. 4.5, plas 3, mito 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006406)
HIX0006406
HIT000498774
(
AK304150
)
(SUN domain-containing protein 1 isoform b.)
genome : 888,136 - 913,026 (24,891)
query : 1 - 1,827 (1,827/1,827)
15 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.996;0.988;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR012919 : SUN domain
IPR018539 : SUN domain-containing protein 1
GO :
0005639 : Cellular Component : integral component of nuclear inner membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 10, nucl 6.5, pero 5, plas 4.5,
extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006406)
HIX0006406
HIT000511448 (
ENST00000413514
)
(SUN domain-containing protein 1; Protein unc-84 homolog A; Sad1/unc-84 protein-like 1;)
genome : 888,141 - 913,026 (24,886)
query : 1 - 1,822 (1,822/1,822)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 11, cyto_nucl 8.83333, plas 7.5,
cyto_mito 7.33333, nucl 5.5, extr_plas 4.5, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006406)
HIX0006406
HIT000009011
(
AK025737
)
(SUN domain-containing protein 1 isoform b.)
genome : 889,155 - 914,539 (25,385)
query : 7 - 3,472 (3,466/3,489)
16 exons
identity = 0.999
5'(1.000;0.991;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.998)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 14.3333, extr 6, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006406)
HIX0006406
HIT000531146 (
ENST00000433212
)
(SUN domain-containing protein 1; Protein unc-84 homolog A; Sad1/unc-84 protein-like 1;)
genome : 889,155 - 914,539 (25,385)
query : 7 - 3,474 (3,468/3,474)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.998
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 9, cyto 8.5, cyto_nucl 7, plas 5.5,
mito_pero 5.5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006406)
HIX0006406
HIT000569191 (
ENST00000464442
)
(SUN domain-containing protein 1; Protein unc-84 homolog A; Sad1/unc-84 protein-like 1;)
genome : 889,438 - 892,544 (3,107)
query : 1 - 580 (580/580)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 9.5, cyto_nucl 9, nucl 7.5, extr 5, mito 4,
extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006406)
HIX0006406
HIT000584493 (
ENST00000480475
)
(SUN domain-containing protein 1; Protein unc-84 homolog A; Sad1/unc-84 protein-like 1;)
genome : 889,454 - 892,515 (3,062)
query : 1 - 680 (680/680)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 9.5, cyto_nucl 9, nucl 7.5, extr 5, mito 4,
extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006406)
HIX0006406
HIT000340617
(
BC113951
)
(Golgi to ER traffic protein 4 homolog.)
genome : 891,586 - 936,072 (44,487)
query : 1 - 2,976 (2,976/3,105)
17 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.985;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR007317 : Uncharacterised protein family UPF0363
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15.5, extr_plas 9, nucl 5, pero 5, cyto 3,
mito_pero 3, mito_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006406)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : CR861408
Equus
sp. (Horse) : ENSECAT00000018761
Oryzias
sp. (Medaka) : ENSORLT00000010709
Pan
sp. (Chimpanzee) : XM_001144186
HIX0006406
HIT000555795 (
ENST00000457861
)
(SUN domain-containing protein 1 isoform c.)
genome : 891,587 - 936,072 (44,486)
query : 1 - 2,975 (2,975/2,975)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, extr_plas 10, plas 7, mito 7, lyso 4,
E.R._mito 4, cyto_mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006406)
HIX0217966
HIT000423314
(
AK290517
)
Representative transcript
(CHCH domain containing protein.)
genome : 938,415 - 1,015,185 (76,771)
query : 1 - 1,420 (1,420/1,420)
12 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.988;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR009069 : Cysteine alpha-hairpin motif superfamily
IPR010625 : CHCH
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 12.5, cyto_nucl 8, extr_plas 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217966)
HIX0217966
HIT000555188 (
ENST00000457254
)
(Pleckstrin homology domain containing protein.)
genome : 938,415 - 1,015,185 (76,771)
query : 1 - 1,420 (1,420/1,420)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 10.5, extr 6, nucl 5.5, mito 3,
pero 3, extr_plas 3, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217966)
HIX0006416
HIT000198478 (
NM_001505
)
(Conserved hypothetical protein.)
genome : 1,126,443 - 1,133,451 (7,009)
query : 1 - 2,847 (2,847/2,857)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006416)
HIX0006416
HIT000366616 (
NM_001039966
)
(Conserved hypothetical protein.)
genome : 1,126,443 - 1,133,451 (7,009)
query : 1 - 2,971 (2,971/2,981)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006416)
HIX0006416
HIT000480394 (
ENST00000397092
)
(Conserved hypothetical protein.)
genome : 1,126,443 - 1,133,451 (7,009)
query : 1 - 2,971 (2,971/2,971)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006416)
HIX0006416
HIT000062339
(
AF015257
)
Representative transcript
(G-protein coupled estrogen receptor 1; Chemoattractant receptor-like 2; Flow-induced endothelial G-protein coupled receptor 1; FEG-1; G-protein coupled receptor 30; GPCR-BR; IL8-related receptor DRY12; Lymphocyte-derived G-protein coupled receptor; LYGPR; Membrane estrogen receptor; mER;)
genome : 1,126,512 - 1,133,451 (6,940)
query : 1 - 2,776 (2,776/2,776)
2 exons
identity = 0.998
5'(1.000;0.998)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006416)
HIX0006416
HIT000114815 (
ENST00000297469
)
(Conserved hypothetical protein.)
genome : 1,126,512 - 1,133,451 (6,940)
query : 1 - 2,778 (2,778/2,778)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006416)
HIX0006416
HIT000485163 (
NM_001098201
)
(Conserved hypothetical protein.)
genome : 1,127,723 - 1,133,451 (5,729)
query : 1 - 2,644 (2,644/2,654)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006416)
HIX0006416
HIT000480390 (
ENST00000397088
)
(Conserved hypothetical protein.)
genome : 1,127,723 - 1,133,446 (5,724)
query : 1 - 2,639 (2,639/2,639)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006416)
HIX0006416
HIT000220792
(
U63917
)
(G-protein coupled estrogen receptor 1; Chemoattractant receptor-like 2; Flow-induced endothelial G-protein coupled receptor 1; FEG-1; G-protein coupled receptor 30; GPCR-BR; IL8-related receptor DRY12; Lymphocyte-derived G-protein coupled receptor; LYGPR; Membrane estrogen receptor; mER;)
genome : 1,127,776 - 1,133,446 (5,671)
query : 1 - 2,585 (2,585/2,604)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006416)
HIX0006416
HIT000262817
(
BC067849
)
(G-protein coupled estrogen receptor 1.)
genome : 1,127,785 - 1,133,446 (5,662)
query : 1 - 2,576 (2,576/2,591)
2 exons
identity = 0.996
5'(0.994;0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 3.5, cyto_nucl 3, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006416)
HIX0006416
HIT000398740
(
U77827
)
(Conserved hypothetical protein.)
genome : 1,131,084 - 1,132,731 (1,648)
query : 1 - 1,648 (1,648/1,648)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006416)
HIX0006416
HIT000265997
(
BC082766
)
(Conserved hypothetical protein.)
genome : 1,131,264 - 1,133,446 (2,183)
query : 1 - 1,898 (1,898/1,925)
2 exons
identity = 0.997
5'(1.000;0.994)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006416)
HIX0006416
HIT000035342
(
BC011634
)
(Conserved hypothetical protein.)
genome : 1,131,284 - 1,133,447 (2,164)
query : 11 - 2,174 (2,164/2,218)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 3.5, cyto_nucl 3, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006416)
HIX0006420
HIT000135872 (
ENST00000343242
)
(Transcription factor MafK; Erythroid transcription factor NF-E2 p18 subunit;)
genome : 1,570,350 - 1,582,679 (12,330)
query : 1 - 3,368 (3,368/3,368)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006420)
HIX0006420
HIT000064818
(
AF059194
)
(Transcription factor MafK; Erythroid transcription factor NF-E2 p18 subunit;)
genome : 1,570,368 - 1,580,369 (10,002)
query : 2 - 1,041 (1,040/1,041)
3 exons
identity = 0.997
5'(1.000;1.000;0.996)3'
coverage = 0.999
InterPro :
IPR004826 : Basic leucine zipper domain, Maf-type
IPR004827 : Basic-leucine zipper domain
IPR008917 : Transcription factor, Skn-1-like, DNA-binding domain
IPR024874 : Transcription factor Maf
IPR028574 : Transcription factor MafK
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006420)
HIX0006420
HIT000199260 (
NM_002360
)
(Transcription factor MafK; Erythroid transcription factor NF-E2 p18 subunit;)
genome : 1,570,368 - 1,582,679 (12,312)
query : 1 - 3,350 (3,350/3,350)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006420)
HIX0006420
HIT000017281
(
AK092414
)
Representative transcript
(Transcription factor MafK; Erythroid transcription factor NF-E2 p18 subunit;)
genome : 1,577,123 - 1,582,322 (5,200)
query : 4 - 2,776 (2,773/2,776)
4 exons
identity = 1.000
5'(1.000;1.000;0.999;1.000)3'
coverage = 0.999
InterPro :
IPR004826 : Basic leucine zipper domain, Maf-type
IPR004827 : Basic-leucine zipper domain
IPR008917 : Transcription factor, Skn-1-like, DNA-binding domain
IPR024874 : Transcription factor Maf
IPR028574 : Transcription factor MafK
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006420)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK143654
Rattus
sp. (Rat) : BC070906
Danio
sp. (Zebrafish) : BC096990
Tetraodon
sp. (Tetraodon) : CR638310
Gallus
sp. (Chicken) : ENSGALT00000006656
Monodelphis
sp. (Opossum) : ENSMODT00000011455
Oryzias
sp. (Medaka) : ENSORLT00000005900
Pongo
sp. (Orangutan) : ENSPPYT00000020155
Takifugu
sp. (Fugu) : SINFRUT00000142377
Pan
sp. (Chimpanzee) : XM_001136181
Canis
sp. (Dog) : XM_547016
Bos
sp. (Cow) : XM_871229
HIX0006420
HIT000504388 (
ENST00000403150
)
(Transcription factor MafK; Erythroid transcription factor NF-E2 p18 subunit;)
genome : 1,577,123 - 1,582,322 (5,200)
query : 1 - 2,773 (2,773/2,773)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006420)
HIX0006420
HIT000435623
(
BC148194
)
(Conserved hypothetical protein.)
genome : 1,580,047 - 1,581,609 (1,563)
query : 12 - 1,574 (1,563/1,582)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 0.988
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 12, nucl 2.5, cyto_nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006420)
HIX0006420
HIT000435497
(
BC143041
)
(Conserved hypothetical protein.)
genome : 1,580,047 - 1,581,609 (1,563)
query : 12 - 1,574 (1,563/1,574)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 0.993
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 12, nucl 2.5, cyto_nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006420)
HIX0006420
HIT000435496
(
BC143040
)
(Conserved hypothetical protein.)
genome : 1,580,047 - 1,581,609 (1,563)
query : 10 - 1,572 (1,563/1,580)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 0.989
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 12, nucl 2.5, cyto_nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006420)
HIX0006420
HIT000639861 (
ENST00000540816
)
(Conserved hypothetical protein.)
genome : 1,580,047 - 1,581,609 (1,563)
query : 1 - 1,559 (1,559/1,559)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 12, nucl 2.5, cyto_nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006420)
HIX0187588
pHIT000105273 ( pHIT000105273 )
Representative transcript
(Hypothetical protein.)
genome : 120,404 - 149,145 (28,742)
query : 1 - 423 (423/423)
3 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0187588)
CAGE tag :
T07R0004A3F9
HIX0187587
pHIT000105274 ( pHIT000105274 )
Representative transcript
(Hypothetical short protein.)
genome : 175,137 - 189,271 (14,135)
query : 1 - 228 (228/228)
2 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0187587)
CAGE tag :
T07R0004A3F9
HIX0201265
pHIT000105275 ( pHIT000105275 )
Representative transcript
(Conserved hypothetical protein.)
genome : 223,704 - 283,866 (60,163)
query : 1 - 891 (891/891)
2 exons
InterPro :
IPR016133 : Insect antifreeze protein
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201265)
CAGE tag :
T07F0004AB47
Ortholog candidate ( ->
Evola
)
Takifugu
sp. (Fugu) : SINFRUT00000178352
HIX0188512
pHIT000012491 ( pHIT000012491 )
Representative transcript
(Hypothetical protein.)
genome : 524,679 - 525,715 (1,037)
query : 1 - 243 (243/243)
2 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0188512)
CAGE tag :
H08BA03L1604,H08BA23E1112,H22BA12N0812
H40BB12D1007
HIX0006414
pHIT000012525 ( pHIT000012525 )
(Conserved hypothetical protein.)
genome : 1,092,745 - 1,098,153 (5,409)
query : 1 - 1,299 (1,299/1,299)
3 exons
SOSUI :
MEMBRANE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006414)
CAGE tag :
H09BA67I0901,H21BA36P0810,H21BB16D1209
H22BA02N1113,H22BB96C1307
HIX0167652
pHIT000105303 ( pHIT000105303 )
(G-protein coupled estrogen receptor 1; Chemoattractant receptor-like 2; Flow-induced endothelial G-protein coupled receptor 1; FEG-1; G-protein coupled receptor 30; GPCR-BR; IL8-related receptor DRY12; Lymphocyte-derived G-protein coupled receptor; LYGPR; Membrane estrogen receptor; mER;)
genome : 1,122,015 - 1,132,492 (10,478)
query : 1 - 1,485 (1,485/1,485)
3 exons
SOSUI :
MEMBRANE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0167652)
CAGE tag :
T07R001176A2
HIX0187537
pHIT000012540 ( pHIT000012540 )
Representative transcript
(Hypothetical protein.)
genome : 1,139,353 - 1,166,614 (27,262)
query : 1 - 306 (306/306)
4 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0187537)
CAGE tag :
H04BA38N0201,H05BC72I1001,H09BA37C1203
H10BA33H1307,H21BA02O1808
HIX0187537
pHIT000079628 ( pHIT000079628 )
(Hypothetical short protein.)
genome : 1,139,353 - 1,166,614 (27,262)
query : 1 - 72 (72/72)
2 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0187537)
CAGE tag :
H04BA38N0201,H05BC72I1001,H09BA37C1203
H10BA33H1307,H21BA02O1808
HIX0187537
pHIT000080135 ( pHIT000080135 )
(Hypothetical short protein.)
genome : 1,139,353 - 1,166,614 (27,262)
query : 1 - 225 (225/225)
3 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0187537)
CAGE tag :
H21BA09B1202,H21BA13M1705,H21BB23M1405
H21BB31D0911,H22BA33M1907
HIX0188513
pHIT000012544 ( pHIT000012544 )
Representative transcript
(Hypothetical protein.)
genome : 1,212,896 - 1,213,165 (270)
query : 1 - 270 (270/270)
1 exon
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0188513)
CAGE tag :
H08BA42C0606,H27BD98D2401,H28BA64P0709
H39BB85P0308,H40BC08B0201
HIX0034127
pHIT000105313 ( pHIT000105313 )
Representative transcript
(Conserved hypothetical protein.)
genome : 1,272,654 - 1,286,406 (13,753)
query : 1 - 984 (984/984)
4 exons
InterPro :
IPR017970 : Homeobox, conserved site
GO :
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034127)
CAGE tag :
T07R001341C8
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : D87748
Canis
sp. (Dog) : ENSCAFT00000018714
Danio
sp. (Zebrafish) : ENSDART00000055157
Oryzias
sp. (Medaka) : ENSORLT00000005974
Tetraodon
sp. (Tetraodon) : GSTENT00034439001
Mus
sp. (Mouse) : S83543
Takifugu
sp. (Fugu) : SINFRUT00000167998
Pan
sp. (Chimpanzee) : XM_001175360
Bos
sp. (Cow) : XM_001256731
Gallus
sp. (Chicken) : XM_414766
HIX0034127
pHIT000105306 ( pHIT000105306 )
(Conserved hypothetical protein.)
genome : 1,272,654 - 1,276,613 (3,960)
query : 1 - 819 (819/819)
4 exons
InterPro :
IPR017970 : Homeobox, conserved site
GO :
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034127)
CAGE tag :
T07F0012E7D8
HIX0034127
pHIT000105315 ( pHIT000105315 )
(Conserved hypothetical protein.)
genome : 1,272,654 - 1,276,613 (3,960)
query : 1 - 1,596 (1,596/1,596)
3 exons
InterPro :
IPR017970 : Homeobox, conserved site
GO :
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0034127)
CAGE tag :
T07R0014557A
HIX0217676
pHIT000079381 ( pHIT000079381 )
(Conserved hypothetical protein.)
genome : 1,569,222 - 1,580,011 (10,790)
query : 1 - 591 (591/591)
3 exons
InterPro :
IPR004826 : Basic leucine zipper domain, Maf-type
IPR004827 : Basic-leucine zipper domain
IPR008917 : Transcription factor, Skn-1-like, DNA-binding domain
IPR024874 : Transcription factor Maf
IPR028574 : Transcription factor MafK
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217676)
CAGE tag :
H05BB16O0509,H09BA27K2107
HIX0207876
eHIT000022215 ( ESTsASS_7_776 )
Representative transcript
(Non-protein coding transcript.)
genome : 23,988 - 27,231 (3,244)
query : 1 - 303 (303/303)
2 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207876)
ESTs used for assembly :
AA431778
10000
1-10000 N
AC215522.3
10001-43901 F +
NCBI
AC093627.4
43902-198548 F +
NCBI
AC145676.2
198549-232484 F +
NCBI
50000
232485-282484 N
AC187652.1
282485-319508 F +
NCBI
AC187653.1
319509-352907 F -
NCBI
AC188616.2
352908-383115 F +
NCBI
AC226118.2
383116-499544 F +
NCBI
AC188617.2
499545-503718 F +
NCBI
AC148337.2
503719-513041 F +
NCBI
AC147651.4
513042-673180 F +
NCBI
AC144411.2
673181-827408 F +
NCBI
AC099731.5
827409-918576 F +
NCBI
AC073957.7
918577-1112780 F +
NCBI
AC091729.4
1112781-1217065 F +
NCBI
AC073094.11
1217066-1386220 F +
NCBI
AC102953.5
1386221-1533216 F +
NCBI
AC093734.3
1533217-1600000 F +
NCBI