bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0006331
HIT000001138
(
AB037844
)
Representative transcript
(Transmembrane protein 181;)
genome : 158,957,468 - 159,056,460 (98,993)
query : 3 - 5,390 (5,388/5,390)
17 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.996)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006331)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK045744
Mus
sp. (Mouse) : AK154554
Canis
sp. (Dog) : ENSCAFT00000001010
Equus
sp. (Horse) : ENSECAT00000022211
Gallus
sp. (Chicken) : ENSGALT00000022325
Oryzias
sp. (Medaka) : ENSORLT00000018541
Pongo
sp. (Orangutan) : ENSPPYT00000019943
Tetraodon
sp. (Tetraodon) : GSTENT00023077001
Danio
sp. (Zebrafish) : NM_001044840
Takifugu
sp. (Fugu) : SINFRUT00000154641
Rattus
sp. (Rat) : XM_001067532
Monodelphis
sp. (Opossum) : XM_001381353
Bos
sp. (Cow) : XM_865749
Macaca
sp. (Macaque) : XR_011372
Pan
sp. (Chimpanzee) : XR_020371
HIX0006331
HIT000486232 (
NM_020823
)
(Transmembrane protein 181;)
genome : 158,957,468 - 159,056,467 (99,000)
query : 1 - 5,397 (5,397/5,397)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006331)
HIX0006331
HIT000348370 (
ENST00000367090
)
(Transmembrane protein 181;)
genome : 158,957,468 - 159,056,460 (98,993)
query : 1 - 5,390 (5,390/5,390)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006331)
HIX0006331
HIT000093095
(
BC033450
)
(Conserved hypothetical protein.)
genome : 158,957,644 - 159,056,061 (98,418)
query : 5 - 4,714 (4,710/4,748)
16 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.999)3'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006331)
HIX0006331
HIT000332635
(
AY927473
)
(Transmembrane protein 181.)
genome : 158,991,078 - 159,010,792 (19,715)
query : 54 - 1,077 (1,024/1,078)
6 exons
identity = 0.963
5'(1.000;1.000;0.992;0.983)3'
coverage = 0.950
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, plas 8.5, cyto_mito 8.5, extr_plas 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006331)
HIX0006331
HIT000332634
(
AY927472
)
(Transmembrane protein 181.)
genome : 158,991,051 - 159,010,793 (19,743)
query : 1 - 1,546 (1,546/1,546)
7 exons
identity = 0.995
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 15, extr 7.5, E.R._mito 7.5, cyto_mito 7.5,
mito_pero 7.5, mito_nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006331)
HIX0006331
HIT000332633
(
AY927471
)
(Transmembrane protein 181.)
genome : 158,991,051 - 159,010,792 (19,742)
query : 1 - 1,009 (1,009/1,009)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 13, plas 9.5, extr_plas 7, E.R._mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006331)
HIX0006331
HIT000332747
(
AY927585
)
(Transmembrane protein 181.)
genome : 158,991,078 - 159,010,792 (19,715)
query : 1 - 980 (980/981)
6 exons
identity = 0.994
5'(1.000;1.000;0.992;1.000)3'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, golg 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006331)
HIX0006331
HIT000457705
(
DQ591174
)
(Non-protein coding transcript.)
genome : 159,005,017 - 159,005,046 (30)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
5'(0.967)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006331)
HIX0122064
HIT000504540 (
ENST00000403590
)
(TatD family protein.)
genome : 159,030,738 - 159,042,668 (11,931)
query : 1 - 2,226 (2,226/2,226)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 5, cyto 5, cyto_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0122064)
HIX0217034
HIT000461189
(
DQ594658
)
Representative transcript
(Non-protein coding transcript.)
genome : 159,031,088 - 159,031,118 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217034)
HIX0217003
HIT000438661
(
DQ572130
)
Representative transcript
(Non-protein coding transcript.)
genome : 159,031,505 - 159,031,534 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217003)
HIX0122064
HIT000006333
(
AK023059
)
Representative transcript
(Putative deoxyribonuclease TATDN2; EC=3.1.21.-;)
genome : 159,032,051 - 159,034,328 (2,278)
query : 1 - 2,282 (2,282/2,282)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
EC number :
EC 3.1.21.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, extr 12, cyto 3.5, cyto_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0122064)
HIX0216882
HIT000443313
(
DQ576782
)
Representative transcript
(Non-protein coding transcript.)
genome : 159,032,458 - 159,032,488 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216882)
HIX0216882
HIT000443312
(
DQ576781
)
(Non-protein coding transcript.)
genome : 159,032,458 - 159,032,487 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216882)
HIX0122931
HIT000466321
(
DQ599790
)
Representative transcript
(Non-protein coding transcript.)
genome : 159,034,621 - 159,034,651 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0122931)
HIX0217030
HIT000451869
(
DQ585338
)
Representative transcript
(Non-protein coding transcript.)
genome : 159,042,441 - 159,042,472 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217030)
HIX0165000
HIT000047739
(
AK127866
)
Representative transcript
(Conserved hypothetical protein.)
genome : 159,048,372 - 159,051,525 (3,154)
query : 1 - 3,159 (3,159/3,159)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 13.5, cyto_nucl 11.5, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0165000)
HIX0006331
HIT000026297
(
AL359569
)
(Hypothetical protein.)
genome : 159,054,103 - 159,056,461 (2,359)
query : 1 - 2,358 (2,358/2,378)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 9, cyto_nucl 4.16667, nucl 3.5,
cyto 3.5, cyto_pero 3.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006331)
HIX0006331
HIT000247811
(
AJ420523
)
(Hypothetical short protein.)
genome : 159,054,409 - 159,056,461 (2,053)
query : 12 - 2,062 (2,051/2,081)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, extr 12, cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006331)
HIX0006331
HIT000097816
(
BC044210
)
(Hypothetical short protein.)
genome : 159,054,476 - 159,056,461 (1,986)
query : 1 - 1,986 (1,986/2,010)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, extr 12, cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006331)
HIX0006331
HIT000247764
(
AJ420476
)
(Hypothetical short protein.)
genome : 159,054,570 - 159,056,058 (1,489)
query : 10 - 1,499 (1,490/1,518)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, extr 12, cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006331)
HIX0006331
HIT000339085
(
BC108681
)
(Hypothetical short protein.)
genome : 159,054,710 - 159,056,058 (1,349)
query : 1 - 1,350 (1,350/1,365)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006331)
HIX0006331
HIT000259848
(
BC058328
)
(Hypothetical short protein.)
genome : 159,054,717 - 159,056,461 (1,745)
query : 1 - 1,742 (1,742/1,757)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, extr 12, cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006331)
HIX0006331
HIT000098254
(
BC046100
)
(Hypothetical short protein.)
genome : 159,054,979 - 159,056,461 (1,483)
query : 1 - 1,483 (1,483/1,497)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, extr 12, cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006331)
HIX0006331
HIT000334381
(
BC092402
)
(Hypothetical short protein.)
genome : 159,054,991 - 159,056,461 (1,471)
query : 1 - 1,471 (1,471/1,519)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, extr 12, cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006331)
HIX0006331
HIT000262737
(
BC067769
)
(Hypothetical short protein.)
genome : 159,055,001 - 159,056,461 (1,461)
query : 1 - 1,463 (1,463/1,478)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, extr 12, cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006331)
HIX0006332
HIT000386402
(
BC105588
)
(Dynein light chain Tctex-type 1; Protein CW-1; T-complex testis-specific protein 1 homolog;)
genome : 159,057,508 - 159,065,763 (8,256)
query : 5 - 720 (716/749)
5 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.980)5'
coverage = 0.992
InterPro :
IPR005334 : Tctex-1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 16, extr 10, cyto 5, extr_plas 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006332)
HIX0006332
HIT000009943
(
AK026669
)
(Dynein light chain Tctex-type 1.)
genome : 159,057,508 - 159,063,820 (6,313)
query : 1 - 2,895 (2,895/2,924)
2 exons
identity = 0.997
3'(0.996;0.999)5'
coverage = 1.000
InterPro :
IPR005334 : Tctex-1
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 8, cyto_nucl 7, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006332)
HIX0006332
HIT000040751
(
BC029412
)
Representative transcript
(Dynein light chain Tctex-type 1; Protein CW-1; T-complex testis-specific protein 1 homolog;)
genome : 159,057,510 - 159,065,771 (8,262)
query : 1 - 722 (722/752)
5 exons
identity = 0.997
3'(0.998;1.000;1.000;1.000;0.983)5'
coverage = 0.997
InterPro :
IPR005334 : Tctex-1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 16, extr 10, cyto 5, extr_plas 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006332)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AJ131437
Mus
sp. (Mouse) : AK005569
Mus
sp. (Mouse) : AK030569
Bos
sp. (Cow) : BC108160
Gallus
sp. (Chicken) : BX934469
Tetraodon
sp. (Tetraodon) : CR716919
Danio
sp. (Zebrafish) : ENSDART00000105444
Equus
sp. (Horse) : ENSECAT00000009872
Pongo
sp. (Orangutan) : ENSPPYT00000019945
Takifugu
sp. (Fugu) : SINFRUT00000154636
Macaca
sp. (Macaque) : XM_001093305
Pan
sp. (Chimpanzee) : XM_001147088
Monodelphis
sp. (Opossum) : XM_001371254
Canis
sp. (Dog) : XM_849938
HIX0006332
HIT000220445
(
U56255
)
(Dynein light chain Tctex-type 1; Protein CW-1; T-complex testis-specific protein 1 homolog;)
genome : 159,057,508 - 159,065,740 (8,233)
query : 1 - 693 (693/713)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR005334 : Tctex-1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 16, extr 10, cyto 5, extr_plas 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006332)
HIX0006332
HIT000203114 (
NM_006519
)
(Dynein light chain Tctex-type 1; Protein CW-1; T-complex testis-specific protein 1 homolog;)
genome : 159,057,508 - 159,065,804 (8,297)
query : 1 - 757 (757/774)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 16, extr 10, cyto 5, extr_plas 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006332)
HIX0006332
HIT000348369 (
ENST00000367089
)
(Dynein light chain Tctex-type 1; Protein CW-1; T-complex testis-specific protein 1 homolog;)
genome : 159,057,506 - 159,065,771 (8,266)
query : 1 - 726 (726/726)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 16, extr 10, cyto 5, extr_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006332)
HIX0006332
HIT000348368 (
ENST00000367088
)
(Dynein light chain Tctex-type 1.)
genome : 159,057,506 - 159,063,820 (6,315)
query : 1 - 2,891 (2,891/2,891)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 8, cyto_nucl 7, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006332)
HIX0006332
HIT000101577
(
D50663
)
(Dynein light chain Tctex-type 1; Protein CW-1; T-complex testis-specific protein 1 homolog;)
genome : 159,057,509 - 159,065,752 (8,244)
query : 1 - 704 (704/704)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR005334 : Tctex-1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 16, extr 10, cyto 5, extr_plas 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006332)
HIX0006332
HIT000558227
(
EU862237
)
(Dynein light chain Tctex-type 1; Protein CW-1; T-complex testis-specific protein 1 homolog;)
genome : 159,057,859 - 159,065,740 (7,882)
query : 5 - 346 (342/350)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.977
InterPro :
IPR005334 : Tctex-1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 16, extr 10, cyto 5, extr_plas 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006332)
HIX0006332
HIT000434467
(
AK315601
)
(Dynein light chain Tctex-type 1; Protein CW-1; T-complex testis-specific protein 1 homolog;)
genome : 159,057,859 - 159,065,775 (7,917)
query : 1 - 377 (377/377)
5 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;0.984)5'
coverage = 1.000
InterPro :
IPR005334 : Tctex-1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 16, extr 10, cyto 5, extr_plas 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006332)
HIX0006332
HIT000267781
(
CR456931
)
(Dynein light chain Tctex-type 1; Protein CW-1; T-complex testis-specific protein 1 homolog;)
genome : 159,057,861 - 159,065,740 (7,880)
query : 1 - 340 (340/342)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.994
InterPro :
IPR005334 : Tctex-1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 16, extr 10, cyto 5, extr_plas 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006332)
HIX0006332
HIT000348365 (
ENST00000367085
)
(Dynein light chain Tctex-type 1.)
genome : 159,058,252 - 159,065,770 (7,519)
query : 1 - 774 (774/774)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006332)
HIX0006333
HIT000316692 (
NM_001009991
)
(Synaptotagmin-like protein 3 family protein.)
genome : 159,071,046 - 159,185,908 (114,863)
query : 1 - 2,284 (2,284/2,284)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 12
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006333)
HIX0006333
HIT000657535 (
NM_001242384
)
(Synaptotagmin-like protein 3 family protein.)
genome : 159,071,046 - 159,185,908 (114,863)
query : 1 - 2,504 (2,504/2,504)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 16, cyto 11.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006333)
HIX0006333
HIT000657538 (
NM_001242394
)
(Synaptotagmin-like protein 3 family protein.)
genome : 159,071,046 - 159,185,908 (114,863)
query : 1 - 2,896 (2,896/2,896)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 16, cyto 11.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006333)
HIX0006333
HIT000657539 (
NM_001242395
)
(Synaptotagmin-like protein 3 family protein.)
genome : 159,071,046 - 159,185,908 (114,863)
query : 1 - 2,692 (2,692/2,692)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 12
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006333)
HIX0006333
HIT000313828 (
ENST00000360448
)
(Synaptotagmin-like protein 3 family protein.)
genome : 159,071,046 - 159,185,901 (114,856)
query : 1 - 2,277 (2,277/2,277)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006333)
HIX0006333
HIT000574244 (
ENST00000469735
)
(Hypothetical short protein.)
genome : 159,071,085 - 159,084,080 (12,996)
query : 1 - 532 (532/532)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, nucl 13, cyto 12, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006333)
HIX0006333
HIT000017596
(
AK092729
)
(Synaptotagmin-like protein 3 isoform 1.)
genome : 159,071,086 - 159,185,903 (114,818)
query : 1 - 2,087 (2,087/2,087)
14 exons
identity = 0.998
5'(1.000;1.000;1.000;0.995;1.000;0.985;1.000;
1.000;1.000;1.000;1.000;0.994;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000008 : C2 domain
IPR010911 : Rab-binding domain
IPR011011 : Zinc finger, FYVE/PHD-type
IPR028704 : Synaptotagmin-like protein 3
GO :
0005515 : Molecular Function : protein binding
0005544 : Molecular Function : calcium-dependent phospholipid binding
0006886 : Biological Process : intracellular protein transport
0006887 : Biological Process : exocytosis
0017137 : Molecular Function : Rab GTPase binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, extr 10, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006333)
HIX0006333
HIT000493336
(
AK298712
)
Representative transcript
(Synaptotagmin-like protein 3 isoform 1.)
genome : 159,071,086 - 159,185,828 (114,743)
query : 1 - 2,250 (2,250/2,256)
19 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.981;1.000;1.000;1.000;1.000;1.000;1.000;
0.994;1.000;1.000;1.000;0.990)3'
coverage = 0.997
InterPro :
IPR000008 : C2 domain
IPR010911 : Rab-binding domain
IPR011011 : Zinc finger, FYVE/PHD-type
IPR028704 : Synaptotagmin-like protein 3
GO :
0005515 : Molecular Function : protein binding
0005544 : Molecular Function : calcium-dependent phospholipid binding
0006886 : Biological Process : intracellular protein transport
0006887 : Biological Process : exocytosis
0017137 : Molecular Function : Rab GTPase binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006333)
HIX0006333
HIT000266117
(
BC085612
)
(Synaptotagmin-like protein 3 isoform 1.)
genome : 159,072,782 - 159,185,901 (113,120)
query : 9 - 2,223 (2,215/2,242)
16 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.995;0.997)3'
coverage = 0.996
InterPro :
IPR000008 : C2 domain
IPR010911 : Rab-binding domain
IPR011011 : Zinc finger, FYVE/PHD-type
IPR028704 : Synaptotagmin-like protein 3
GO :
0005515 : Molecular Function : protein binding
0005544 : Molecular Function : calcium-dependent phospholipid binding
0006886 : Biological Process : intracellular protein transport
0006887 : Biological Process : exocytosis
0017137 : Molecular Function : Rab GTPase binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006333)
HIX0006333
HIT000050363
(
AK131092
)
(Synaptotagmin-like protein 3 isoform 2.)
genome : 159,072,782 - 159,185,829 (113,048)
query : 2 - 5,693 (5,692/5,693)
13 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.999;0.997)3'
coverage = 1.000
InterPro :
IPR000008 : C2 domain
IPR010911 : Rab-binding domain
IPR011011 : Zinc finger, FYVE/PHD-type
IPR028704 : Synaptotagmin-like protein 3
GO :
0005515 : Molecular Function : protein binding
0005544 : Molecular Function : calcium-dependent phospholipid binding
0006886 : Biological Process : intracellular protein transport
0006887 : Biological Process : exocytosis
0017137 : Molecular Function : Rab GTPase binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 6, cyto_nucl 5.5, mito 3.5,
E.R._mito 3.33333, mito_pero 3.33333, cyto 3, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006333)
HIX0006333
HIT000114748 (
ENST00000297239
)
(Synaptotagmin-like protein 3 family protein.)
genome : 159,082,351 - 159,185,901 (103,551)
query : 1 - 2,292 (2,292/2,292)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 16, cyto 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006333)
HIX0006333
HIT000336253
(
BC100828
)
(Synaptotagmin-like protein 3 family protein.)
genome : 159,082,365 - 159,185,754 (103,390)
query : 1 - 2,319 (2,319/2,319)
14 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.995;0.996)3'
coverage = 1.000
InterPro :
IPR000008 : C2 domain
IPR010911 : Rab-binding domain
IPR011011 : Zinc finger, FYVE/PHD-type
IPR028704 : Synaptotagmin-like protein 3
GO :
0005515 : Molecular Function : protein binding
0005544 : Molecular Function : calcium-dependent phospholipid binding
0006886 : Biological Process : intracellular protein transport
0006887 : Biological Process : exocytosis
0017137 : Molecular Function : Rab GTPase binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006333)
HIX0006333
HIT000336254
(
BC100829
)
(Synaptotagmin-like protein 3 family protein.)
genome : 159,082,365 - 159,185,754 (103,390)
query : 1 - 2,523 (2,523/2,523)
16 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.994;1.000;1.000;
0.995;0.996)3'
coverage = 1.000
InterPro :
IPR000008 : C2 domain
IPR010911 : Rab-binding domain
IPR011011 : Zinc finger, FYVE/PHD-type
IPR028704 : Synaptotagmin-like protein 3
GO :
0005515 : Molecular Function : protein binding
0005544 : Molecular Function : calcium-dependent phospholipid binding
0006886 : Biological Process : intracellular protein transport
0006887 : Biological Process : exocytosis
0017137 : Molecular Function : Rab GTPase binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 16, cyto 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006333)
HIX0006333
HIT000336255
(
BC100830
)
(Synaptotagmin-like protein 3 family protein.)
genome : 159,082,365 - 159,185,754 (103,390)
query : 1 - 2,131 (2,131/2,131)
17 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.995;0.996)3'
coverage = 1.000
InterPro :
IPR000008 : C2 domain
IPR010911 : Rab-binding domain
IPR011011 : Zinc finger, FYVE/PHD-type
IPR028704 : Synaptotagmin-like protein 3
GO :
0005515 : Molecular Function : protein binding
0005544 : Molecular Function : calcium-dependent phospholipid binding
0006886 : Biological Process : intracellular protein transport
0006887 : Biological Process : exocytosis
0017137 : Molecular Function : Rab GTPase binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 16, cyto 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006333)
HIX0006333
HIT000336256
(
BC100831
)
(Synaptotagmin-like protein 3 family protein.)
genome : 159,082,365 - 159,185,754 (103,390)
query : 1 - 2,131 (2,131/2,131)
17 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.995;0.996)3'
coverage = 1.000
InterPro :
IPR000008 : C2 domain
IPR010911 : Rab-binding domain
IPR011011 : Zinc finger, FYVE/PHD-type
IPR028704 : Synaptotagmin-like protein 3
GO :
0005515 : Molecular Function : protein binding
0005544 : Molecular Function : calcium-dependent phospholipid binding
0006886 : Biological Process : intracellular protein transport
0006887 : Biological Process : exocytosis
0017137 : Molecular Function : Rab GTPase binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 16, cyto 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006333)
HIX0006333
HIT000498815
(
AK304191
)
(Synaptotagmin-like protein 3 family protein.)
genome : 159,084,195 - 159,185,908 (101,714)
query : 4 - 1,761 (1,758/1,761)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.995;0.997)3'
coverage = 0.998
InterPro :
IPR000008 : C2 domain
IPR028704 : Synaptotagmin-like protein 3
GO :
0005515 : Molecular Function : protein binding
0005544 : Molecular Function : calcium-dependent phospholipid binding
0006887 : Biological Process : exocytosis
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.5, cyto 9.5, mito_nucl 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006333)
HIX0006333
HIT000348361 (
ENST00000367081
)
(Synaptotagmin-like protein 3 family protein.)
genome : 159,084,195 - 159,185,908 (101,714)
query : 1 - 1,758 (1,758/1,758)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.5, cyto 9.5, mito_nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006333)
HIX0006333
HIT000012364
(
AK055750
)
(Synaptotagmin-like protein 3 family protein.)
genome : 159,084,435 - 159,185,903 (101,469)
query : 1 - 2,212 (2,212/2,212)
15 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.991;1.000;0.995;
0.997)3'
coverage = 1.000
InterPro :
IPR000008 : C2 domain
IPR028704 : Synaptotagmin-like protein 3
GO :
0005515 : Molecular Function : protein binding
0005544 : Molecular Function : calcium-dependent phospholipid binding
0006887 : Biological Process : exocytosis
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 15.8333, cyto 8.5,
cyto_golg 5.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006333)
HIX0033252
HIT000097439
(
BC042966
)
Representative transcript
(Conserved hypothetical protein.)
genome : 159,115,999 - 159,118,310 (2,312)
query : 1 - 2,309 (2,309/2,321)
1 exon
identity = 0.993
5'(0.993)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033252)
HIX0165399
HIT000505740 (
ENST00000406819
)
(Conserved hypothetical protein.)
genome : 159,146,779 - 159,147,835 (1,057)
query : 1 - 1,057 (1,057/1,057)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16.5, extr 12, mito_pero 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0165399)
HIX0207563
HIT000659841 (
NR_037482
)
(Hypothetical short protein.)
genome : 159,185,693 - 159,185,785 (93)
query : 1 - 93 (93/93)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207563)
HIX0207563
HIT000693458 (
ENST00000581555
)
(Hypothetical short protein.)
genome : 159,185,693 - 159,185,785 (93)
query : 1 - 93 (93/93)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207563)
HIX0006334
HIT000036395
(
BC013903
)
(Ezrin; Cytovillin; Villin-2; p81;)
genome : 159,186,777 - 159,239,257 (52,481)
query : 1 - 3,062 (3,062/3,164)
13 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.960;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000299 : FERM domain
IPR000798 : Ezrin/radixin/moesin like
IPR008954 : Moesin tail domain
IPR011259 : Ezrin/radixin/moesin, C-terminal
IPR014352 : FERM/acyl-CoA-binding protein, 3-helical bundle
IPR018979 : FERM, N-terminal
IPR018980 : FERM, C-terminal PH-like domain
IPR019747 : FERM conserved site
IPR019748 : FERM central domain
IPR019749 : Band 4.1 domain
IPR029071 : Ubiquitin-related domain
GO :
0003779 : Molecular Function : actin binding
0005737 : Cellular Component : cytoplasm
0005856 : Cellular Component : cytoskeleton
0008092 : Molecular Function : cytoskeletal protein binding
0019898 : Cellular Component : extrinsic component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 9, cyto_pero 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006334)
HIX0006334
HIT000485843 (
NM_001111077
)
(Ezrin; Cytovillin; Villin-2; p81;)
genome : 159,186,773 - 159,240,456 (53,684)
query : 1 - 3,115 (3,115/3,138)
14 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.960;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 9, cyto_pero 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006334)
HIX0006334
HIT000200215 (
NM_003379
)
(Ezrin; Cytovillin; Villin-2; p81;)
genome : 159,186,773 - 159,239,340 (52,568)
query : 1 - 3,149 (3,149/3,172)
13 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.960;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 9, cyto_pero 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006334)
HIX0006334
HIT000026256
(
AL162086
)
Representative transcript
(Ezrin; Cytovillin; Villin-2; p81;)
genome : 159,186,780 - 159,240,396 (53,617)
query : 11 - 3,052 (3,042/3,072)
14 exons
identity = 0.993
3'(0.991;1.000;0.989;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.960;1.000;1.000;0.920)5'
coverage = 0.995
InterPro :
IPR000299 : FERM domain
IPR000798 : Ezrin/radixin/moesin like
IPR008954 : Moesin tail domain
IPR011259 : Ezrin/radixin/moesin, C-terminal
IPR014352 : FERM/acyl-CoA-binding protein, 3-helical bundle
IPR018979 : FERM, N-terminal
IPR018980 : FERM, C-terminal PH-like domain
IPR019747 : FERM conserved site
IPR019748 : FERM central domain
IPR019749 : Band 4.1 domain
IPR029071 : Ubiquitin-related domain
GO :
0003779 : Molecular Function : actin binding
0005737 : Cellular Component : cytoplasm
0005856 : Cellular Component : cytoskeleton
0008092 : Molecular Function : cytoskeletal protein binding
0019898 : Cellular Component : extrinsic component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 9, cyto_pero 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006334)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AB019790
Mus
sp. (Mouse) : AK145707
Rattus
sp. (Rat) : BC081958
Bos
sp. (Cow) : BC102573
Danio
sp. (Zebrafish) : BC139506
Oryzias
sp. (Medaka) : ENSORLT00000015174
Oryzias
sp. (Medaka) : ENSORLT00000022721
Pongo
sp. (Orangutan) : ENSPPYT00000019947
Tetraodon
sp. (Tetraodon) : GSTENT00030411001
Takifugu
sp. (Fugu) : SINFRUT00000157921
Macaca
sp. (Macaque) : XM_001093089
Monodelphis
sp. (Opossum) : XM_001381361
Equus
sp. (Horse) : XM_001492052
Canis
sp. (Dog) : XM_857339
Pan
sp. (Chimpanzee) : XR_023340
HIX0006334
HIT000263016
(
BC068458
)
(Ezrin; Cytovillin; Villin-2; p81;)
genome : 159,186,780 - 159,239,266 (52,487)
query : 1 - 3,068 (3,068/3,083)
13 exons
identity = 0.996
3'(0.998;0.992;1.000;1.000;1.000;0.994;1.000;
1.000;1.000;0.996;0.960;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000299 : FERM domain
IPR000798 : Ezrin/radixin/moesin like
IPR008954 : Moesin tail domain
IPR011259 : Ezrin/radixin/moesin, C-terminal
IPR014352 : FERM/acyl-CoA-binding protein, 3-helical bundle
IPR018979 : FERM, N-terminal
IPR018980 : FERM, C-terminal PH-like domain
IPR019747 : FERM conserved site
IPR019748 : FERM central domain
IPR019749 : Band 4.1 domain
IPR029071 : Ubiquitin-related domain
GO :
0003779 : Molecular Function : actin binding
0005737 : Cellular Component : cytoplasm
0005856 : Cellular Component : cytoskeleton
0008092 : Molecular Function : cytoskeletal protein binding
0019898 : Cellular Component : extrinsic component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 9, cyto_pero 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006334)
HIX0006334
HIT000130388 (
ENST00000337147
)
(Ezrin; Cytovillin; Villin-2; p81;)
genome : 159,186,773 - 159,239,259 (52,487)
query : 1 - 3,068 (3,068/3,068)
13 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.960;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 9, cyto_pero 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006334)
HIX0006334
HIT000048998
(
AK129727
)
(Ezrin; Cytovillin; Villin-2; p81;)
genome : 159,186,778 - 159,197,472 (10,695)
query : 1 - 2,060 (2,060/2,060)
7 exons
identity = 0.995
3'(0.995;1.000;0.989;1.000;0.975;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000798 : Ezrin/radixin/moesin like
IPR008954 : Moesin tail domain
IPR011259 : Ezrin/radixin/moesin, C-terminal
IPR018980 : FERM, C-terminal PH-like domain
GO :
0003779 : Molecular Function : actin binding
0005737 : Cellular Component : cytoplasm
0008092 : Molecular Function : cytoskeletal protein binding
0019898 : Cellular Component : extrinsic component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 12.5, extr 6, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006334)
HIX0006334
HIT000348355 (
ENST00000367075
)
(Ezrin; Cytovillin; Villin-2; p81;)
genome : 159,186,780 - 159,240,444 (53,665)
query : 1 - 3,096 (3,096/3,096)
14 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.960;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 9, cyto_pero 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006334)
HIX0006334
HIT000321660
(
X51521
)
(Ezrin; Cytovillin; Villin-2; p81;)
genome : 159,186,780 - 159,239,242 (52,463)
query : 1 - 3,044 (3,044/3,044)
13 exons
identity = 0.991
3'(0.985;0.992;0.989;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.960;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000299 : FERM domain
IPR000798 : Ezrin/radixin/moesin like
IPR008954 : Moesin tail domain
IPR011259 : Ezrin/radixin/moesin, C-terminal
IPR014352 : FERM/acyl-CoA-binding protein, 3-helical bundle
IPR018979 : FERM, N-terminal
IPR018980 : FERM, C-terminal PH-like domain
IPR019747 : FERM conserved site
IPR019748 : FERM central domain
IPR019749 : Band 4.1 domain
IPR029071 : Ubiquitin-related domain
GO :
0003779 : Molecular Function : actin binding
0005737 : Cellular Component : cytoplasm
0005856 : Cellular Component : cytoskeleton
0008092 : Molecular Function : cytoskeletal protein binding
0019898 : Cellular Component : extrinsic component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 9, cyto_pero 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006334)
HIX0006334
HIT000191301
(
J05021
)
(Ezrin; Cytovillin; Villin-2; p81;)
genome : 159,186,850 - 159,239,199 (52,350)
query : 3 - 2,930 (2,928/2,930)
13 exons
identity = 0.997
3'(0.997;0.992;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.960;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR000299 : FERM domain
IPR000798 : Ezrin/radixin/moesin like
IPR008954 : Moesin tail domain
IPR011259 : Ezrin/radixin/moesin, C-terminal
IPR014352 : FERM/acyl-CoA-binding protein, 3-helical bundle
IPR018979 : FERM, N-terminal
IPR018980 : FERM, C-terminal PH-like domain
IPR019747 : FERM conserved site
IPR019748 : FERM central domain
IPR019749 : Band 4.1 domain
IPR029071 : Ubiquitin-related domain
GO :
0003779 : Molecular Function : actin binding
0005737 : Cellular Component : cytoplasm
0005856 : Cellular Component : cytoskeleton
0008092 : Molecular Function : cytoskeletal protein binding
0019898 : Cellular Component : extrinsic component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 9, cyto_pero 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006334)
HIX0006334
HIT000499644
(
AK316031
)
(Ezrin; Cytovillin; Villin-2; p81;)
genome : 159,187,162 - 159,191,004 (3,843)
query : 1 - 1,481 (1,481/1,481)
4 exons
identity = 0.997
3'(0.996;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR008954 : Moesin tail domain
IPR011259 : Ezrin/radixin/moesin, C-terminal
GO :
0003779 : Molecular Function : actin binding
0005737 : Cellular Component : cytoplasm
0008092 : Molecular Function : cytoskeletal protein binding
0019898 : Cellular Component : extrinsic component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 17, nucl 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006334)
HIX0006334
HIT000491362
(
AK296738
)
(Radixin isoform 3.)
genome : 159,187,778 - 159,240,419 (52,642)
query : 1 - 1,939 (1,939/1,939)
14 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.988;1.000;0.960;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000299 : FERM domain
IPR000798 : Ezrin/radixin/moesin like
IPR008954 : Moesin tail domain
IPR011259 : Ezrin/radixin/moesin, C-terminal
IPR014352 : FERM/acyl-CoA-binding protein, 3-helical bundle
IPR018980 : FERM, C-terminal PH-like domain
IPR019747 : FERM conserved site
IPR019748 : FERM central domain
GO :
0003779 : Molecular Function : actin binding
0005737 : Cellular Component : cytoplasm
0005856 : Cellular Component : cytoskeleton
0008092 : Molecular Function : cytoskeletal protein binding
0019898 : Cellular Component : extrinsic component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 16, nucl 14.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006334)
HIX0006334
HIT000475669 (
ENST00000392177
)
(Ezrin; Cytovillin; Villin-2; p81;)
genome : 159,187,928 - 159,239,265 (51,338)
query : 1 - 1,823 (1,823/1,823)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, nucl 5, cysk 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006334)
HIX0006334
HIT000494080
(
AK299456
)
(Ezrin; Cytovillin; Villin-2; p81;)
genome : 159,187,928 - 159,239,265 (51,338)
query : 1 - 1,823 (1,823/1,823)
12 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.994;1.000;
0.993;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000299 : FERM domain
IPR000798 : Ezrin/radixin/moesin like
IPR008954 : Moesin tail domain
IPR011259 : Ezrin/radixin/moesin, C-terminal
IPR014352 : FERM/acyl-CoA-binding protein, 3-helical bundle
IPR018980 : FERM, C-terminal PH-like domain
IPR019747 : FERM conserved site
IPR019748 : FERM central domain
IPR019749 : Band 4.1 domain
IPR029071 : Ubiquitin-related domain
GO :
0003779 : Molecular Function : actin binding
0005737 : Cellular Component : cytoplasm
0005856 : Cellular Component : cytoskeleton
0008092 : Molecular Function : cytoskeletal protein binding
0019898 : Cellular Component : extrinsic component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, nucl 5, cysk 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006334)
HIX0006334
HIT000431463
(
AK312597
)
(Ezrin; Cytovillin; Villin-2; p81;)
genome : 159,187,946 - 159,240,399 (52,454)
query : 2 - 1,886 (1,885/1,886)
14 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.996;0.960;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR000299 : FERM domain
IPR000798 : Ezrin/radixin/moesin like
IPR008954 : Moesin tail domain
IPR011259 : Ezrin/radixin/moesin, C-terminal
IPR014352 : FERM/acyl-CoA-binding protein, 3-helical bundle
IPR018979 : FERM, N-terminal
IPR018980 : FERM, C-terminal PH-like domain
IPR019747 : FERM conserved site
IPR019748 : FERM central domain
IPR019749 : Band 4.1 domain
IPR029071 : Ubiquitin-related domain
GO :
0003779 : Molecular Function : actin binding
0005737 : Cellular Component : cytoplasm
0005856 : Cellular Component : cytoskeleton
0008092 : Molecular Function : cytoskeletal protein binding
0019898 : Cellular Component : extrinsic component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 11, cysk 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006334)
HIX0006334
HIT000463146
(
DQ596615
)
(Non-protein coding transcript.)
genome : 159,188,425 - 159,188,454 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006334)
HIX0006334
HIT000072996
(
AF189213
)
(Ezrin; Cytovillin; Villin-2; p81;)
genome : 159,191,819 - 159,204,658 (12,840)
query : 3 - 477 (475/478)
4 exons
identity = 0.989
3'(0.991;0.988;0.990;0.991)5'
coverage = 0.994
InterPro :
IPR000299 : FERM domain
IPR000798 : Ezrin/radixin/moesin like
IPR018980 : FERM, C-terminal PH-like domain
GO :
0005737 : Cellular Component : cytoplasm
0005856 : Cellular Component : cytoskeleton
0008092 : Molecular Function : cytoskeletal protein binding
0019898 : Cellular Component : extrinsic component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, cyto 10, cyto_nucl 9.5, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006334)
HIX0006334
HIT000072991
(
AF188897
)
(Ezrin; Cytovillin; Villin-2; p81;)
genome : 159,191,822 - 159,204,658 (12,837)
query : 3 - 474 (472/475)
4 exons
identity = 0.989
3'(0.990;0.994;0.990;0.981)5'
coverage = 0.994
InterPro :
IPR000299 : FERM domain
IPR000798 : Ezrin/radixin/moesin like
IPR018980 : FERM, C-terminal PH-like domain
GO :
0005737 : Cellular Component : cytoplasm
0005856 : Cellular Component : cytoskeleton
0008092 : Molecular Function : cytoskeletal protein binding
0019898 : Cellular Component : extrinsic component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, cyto_nucl 9.5, cyto 9, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006334)
HIX0006334
HIT000072936
(
AF187552
)
(Ezrin; Cytovillin; Villin-2; p81;)
genome : 159,191,824 - 159,204,674 (12,851)
query : 5 - 489 (485/489)
4 exons
identity = 0.992
3'(0.981;1.000;1.000;0.984)5'
coverage = 0.992
InterPro :
IPR000299 : FERM domain
IPR000798 : Ezrin/radixin/moesin like
IPR018980 : FERM, C-terminal PH-like domain
GO :
0005737 : Cellular Component : cytoplasm
0005856 : Cellular Component : cytoskeleton
0008092 : Molecular Function : cytoskeletal protein binding
0019898 : Cellular Component : extrinsic component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto 5, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006334)
HIX0006334
HIT000073228
(
AF190059
)
(Ezrin; Cytovillin; Villin-2; p81;)
genome : 159,191,828 - 159,204,651 (12,824)
query : 1 - 460 (460/460)
4 exons
identity = 0.980
3'(0.980;0.982;0.979;0.980)5'
coverage = 1.000
InterPro :
IPR000299 : FERM domain
IPR000798 : Ezrin/radixin/moesin like
IPR018980 : FERM, C-terminal PH-like domain
GO :
0005737 : Cellular Component : cytoplasm
0005856 : Cellular Component : cytoskeleton
0008092 : Molecular Function : cytoskeletal protein binding
0019898 : Cellular Component : extrinsic component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, cyto 10, cyto_nucl 9.5, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006334)
HIX0006334
HIT000072990
(
AF188896
)
(Ezrin; Cytovillin; Villin-2; p81;)
genome : 159,191,830 - 159,204,658 (12,829)
query : 6 - 470 (465/471)
4 exons
identity = 0.996
3'(1.000;0.994;0.990;1.000)5'
coverage = 0.987
InterPro :
IPR000299 : FERM domain
IPR000798 : Ezrin/radixin/moesin like
IPR018980 : FERM, C-terminal PH-like domain
GO :
0005737 : Cellular Component : cytoplasm
0005856 : Cellular Component : cytoskeleton
0008092 : Molecular Function : cytoskeletal protein binding
0019898 : Cellular Component : extrinsic component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto_nucl 6, nucl 5.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006334)
HIX0006334
HIT000580398 (
ENST00000476189
)
(Ezrin; Cytovillin; Villin-2; p81;)
genome : 159,204,566 - 159,240,381 (35,816)
query : 1 - 956 (956/956)
8 exons
identity = 0.996
3'(1.000;1.000;1.000;0.960;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_plas 10.1667, cyto_nucl 10.1667, mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006334)
HIX0020191
HIT000022716
(
AK097862
)
Representative transcript
(Activating molecule in BECN1-regulated autophagy protein 1 isoform 1.)
genome : 159,212,759 - 159,214,921 (2,163)
query : 1 - 2,170 (2,170/2,170)
1 exon
identity = 0.987
5'(0.987)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 9, cyto_nucl 2.33333, cyto 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020191)
HIX0006335
HIT000017824
(
AK092957
)
Representative transcript
(Conserved hypothetical protein.)
genome : 159,219,842 - 159,221,893 (2,052)
query : 1 - 2,052 (2,052/2,052)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 24, pero 3, plas 2, mito 1.5, E.R._mito 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006335)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : ENSMMUT00000040223
HIX0165832
HIT000727813 (
NR_102425
)
(Hypothetical short protein.)
genome : 159,239,011 - 159,243,270 (4,260)
query : 1 - 348 (348/362)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito 9, cyto_nucl 5.33333, nucl 4.5,
E.R._mito 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0165832)
HIX0165832
HIT000549646 (
ENST00000451712
)
(Hypothetical short protein.)
genome : 159,239,043 - 159,241,625 (2,583)
query : 1 - 217 (217/217)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito 9, cyto_nucl 5.33333, nucl 4.5,
E.R._mito 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0165832)
HIX0019484
HIT000039777
(
BC024224
)
Representative transcript
(Oligosaccharyltransferase complex subunit OSTC isoform 1.)
genome : 159,262,159 - 159,278,664 (16,506)
query : 5 - 1,189 (1,185/1,230)
3 exons
identity = 0.999
3'(0.999;1.000;1.000)5'
coverage = 0.997
InterPro :
IPR021149 : Oligosaccharyl transferase complex, subunit OST3/OST6
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, lyso 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019484)
Ortholog candidate ( ->
Evola
)
Canis
sp. (Dog) : ENSCAFT00000008436
Oryzias
sp. (Medaka) : ENSORLT00000006167
Pongo
sp. (Orangutan) : ENSPPYT00000019948
Tetraodon
sp. (Tetraodon) : GSTENT00034856001
Takifugu
sp. (Fugu) : SINFRUT00000181518
Macaca
sp. (Macaque) : XM_001092979
Pan
sp. (Chimpanzee) : XM_527551
HIX0019484
HIT000621586 (
ENST00000522287
)
(Oligosaccharyltransferase complex subunit OSTC isoform 1.)
genome : 159,262,159 - 159,278,664 (16,506)
query : 1 - 1,185 (1,185/1,195)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, lyso 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019484)
HIX0019484
HIT000657865 (
NR_028496
)
(Oligosaccharyltransferase complex subunit OSTC isoform 1.)
genome : 159,262,159 - 159,278,664 (16,506)
query : 1 - 1,185 (1,185/1,195)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, lyso 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019484)
HIX0019484
HIT000553441 (
ENST00000455507
)
(Oligosaccharyltransferase complex subunit OSTC isoform 3.)
genome : 159,262,753 - 159,263,202 (450)
query : 1 - 450 (450/450)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019484)
HIX0057775
HIT000348353 (
ENST00000367073
)
(Conserved hypothetical protein.)
genome : 159,290,954 - 159,331,385 (40,432)
query : 1 - 1,018 (1,018/1,018)
4 exons
identity = 0.998
5'(1.000;0.979;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 11, cyto 8.5, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057775)
HIX0057775
HIT000348352 (
ENST00000367072
)
(Conserved hypothetical protein.)
genome : 159,290,971 - 159,331,289 (40,319)
query : 1 - 464 (464/464)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057775)
HIX0057775
HIT000655952 (
NM_001195032
)
(Conserved hypothetical protein.)
genome : 159,309,619 - 159,331,385 (21,767)
query : 1 - 638 (638/654)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057775)
HIX0057775
HIT000589995 (
ENST00000486232
)
(Conserved hypothetical protein.)
genome : 159,329,869 - 159,331,268 (1,400)
query : 1 - 329 (329/329)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 10, cyto 9, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057775)
HIX0123062
HIT000532038 (
ENST00000434104
)
(Longin domain containing protein.)
genome : 159,342,630 - 159,343,182 (553)
query : 1 - 553 (553/580)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.953
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0123062)
HIX0165501
HIT000509202 (
ENST00000411259
)
(Non-protein coding transcript.)
genome : 159,347,498 - 159,347,603 (106)
query : 1 - 106 (106/106)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0165501)
HIX0006336
HIT000348349 (
ENST00000367069
)
(Radial spoke head protein 3 homolog.)
genome : 159,397,312 - 159,421,219 (23,908)
query : 1 - 3,152 (3,152/3,152)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, nucl 13, cyto_nucl 10, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006336)
HIX0006336
HIT000014263
(
AK057655
)
(Radial spoke head protein 3 homolog.)
genome : 159,397,866 - 159,420,813 (22,948)
query : 1 - 1,904 (1,904/1,904)
6 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR009290 : Radial spoke 3
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 16, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006336)
HIX0006336
HIT000547756 (
ENST00000449822
)
(Radial spoke head protein 3 homolog.)
genome : 159,397,866 - 159,420,813 (22,948)
query : 1 - 1,904 (1,904/1,904)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 16, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006336)
HIX0006336
HIT000053512
(
BC050604
)
Representative transcript
(Radial spoke head protein 3 homolog.)
genome : 159,398,267 - 159,421,198 (22,932)
query : 1 - 2,175 (2,175/2,200)
8 exons
identity = 1.000
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR009290 : Radial spoke 3
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, nucl 13, cyto_nucl 10, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006336)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB060862
Mus
sp. (Mouse) : AK006083
Danio
sp. (Zebrafish) : BC134867
Monodelphis
sp. (Opossum) : ENSMODT00000009640
Oryzias
sp. (Medaka) : ENSORLT00000022453
Pongo
sp. (Orangutan) : ENSPPYT00000019950
Rattus
sp. (Rat) : ENSRNOT00000025554
Equus
sp. (Horse) : XM_001491976
Gallus
sp. (Chicken) : XM_419702
Pan
sp. (Chimpanzee) : XM_518832
Canis
sp. (Dog) : XM_541174
HIX0006336
HIT000210284 (
NM_031924
)
(Radial spoke head protein 3 homolog.)
genome : 159,398,267 - 159,421,198 (22,932)
query : 1 - 2,176 (2,176/2,201)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, nucl 13, cyto_nucl 10, cyto 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006336)
HIX0006336
HIT000106340 (
ENST00000252655
)
(Radial spoke head protein 3 homolog.)
genome : 159,398,268 - 159,421,198 (22,931)
query : 1 - 2,175 (2,175/2,175)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, nucl 13, cyto_nucl 10, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006336)
HIX0006336
HIT000114753 (
ENST00000297262
)
(Radial spoke head protein 3 homolog.)
genome : 159,398,268 - 159,421,198 (22,931)
query : 1 - 1,887 (1,887/1,887)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14.5, nucl 11.5, cyto_mito 11, cyto_nucl 10.3333,
cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006336)
HIX0006336
HIT000094017
(
BC035675
)
(Radial spoke head protein 3 homolog.)
genome : 159,398,396 - 159,420,776 (22,381)
query : 1 - 1,625 (1,625/1,655)
8 exons
identity = 0.996
3'(0.994;0.989;1.000;1.000;1.000;0.993;0.989;
0.997)5'
coverage = 1.000
InterPro :
IPR009290 : Radial spoke 3
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 12.5, mito 8.5, cyto 5,
mito_pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006336)
HIX0006336
HIT000014538
(
AK057931
)
(Radial spoke head protein 3 homolog.)
genome : 159,398,403 - 159,421,219 (22,817)
query : 1 - 2,061 (2,061/2,061)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.999)5'
coverage = 1.000
InterPro :
IPR009290 : Radial spoke 3
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, nucl 13, cyto_nucl 10, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006336)
HIX0006336
HIT000078252
(
AF353618
)
(Radial spoke head protein 3 homolog.)
genome : 159,398,405 - 159,420,797 (22,393)
query : 1 - 1,637 (1,637/1,637)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR009290 : Radial spoke 3
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 13.5, cyto 5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006336)
HIX0006336
HIT000087665
(
BC011590
)
(Radial spoke head protein 3 homolog.)
genome : 159,420,322 - 159,421,234 (913)
query : 1 - 913 (913/932)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR009290 : Radial spoke 3
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, nucl 12, cyto_mito 8.16667, cyto 7.5,
mito 6.5, cyto_pero 5.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006336)
HIX0006337
HIT000348346 (
ENST00000367066
)
(T-cell activation Rho GTPase-activating protein; T-cell activation GTPase-activating protein;)
genome : 159,455,500 - 159,466,184 (10,685)
query : 1 - 3,887 (3,887/3,887)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006337)
HIX0006337
HIT000211654 (
NM_054114
)
(T-cell activation Rho GTPase-activating protein; T-cell activation GTPase-activating protein;)
genome : 159,456,024 - 159,466,184 (10,161)
query : 1 - 3,363 (3,363/3,363)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006337)
HIX0006337
HIT000213510 (
NM_152133
)
(T-cell activation Rho GTPase-activating protein isoform a.)
genome : 159,456,024 - 159,466,184 (10,161)
query : 1 - 3,196 (3,196/3,196)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 14.5, cyto 4, golg 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006337)
HIX0006337
HIT000021945
(
AK097090
)
Representative transcript
(T-cell activation Rho GTPase-activating protein; T-cell activation GTPase-activating protein;)
genome : 159,456,029 - 159,466,050 (10,022)
query : 1 - 3,224 (3,224/3,224)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.993)5'
coverage = 1.000
InterPro :
IPR000198 : Rho GTPase-activating protein domain
IPR008936 : Rho GTPase activation protein
GO :
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006337)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC030886
Danio
sp. (Zebrafish) : BC081595
Bos
sp. (Cow) : BC123848
Danio
sp. (Zebrafish) : BC154211
Bos
sp. (Cow) : ENSBTAT00000025952
Gallus
sp. (Chicken) : ENSGALT00000022338
Oryzias
sp. (Medaka) : ENSORLT00000015191
Pongo
sp. (Orangutan) : ENSPPYT00000019951
Rattus
sp. (Rat) : ENSRNOT00000025580
Tetraodon
sp. (Tetraodon) : GSTENT00020320001
Takifugu
sp. (Fugu) : SINFRUT00000141164
Macaca
sp. (Macaque) : XM_001095675
Monodelphis
sp. (Opossum) : XM_001381377
Equus
sp. (Horse) : XM_001500883
Pan
sp. (Chimpanzee) : XM_518833
Canis
sp. (Dog) : XM_541176
HIX0006337
HIT000013807
(
AK057193
)
(T-cell activation Rho GTPase-activating protein; T-cell activation GTPase-activating protein;)
genome : 159,456,029 - 159,459,243 (3,215)
query : 1 - 2,204 (2,204/2,204)
2 exons
identity = 0.989
3'(0.989;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 16.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006337)
HIX0006337
HIT000027574
(
AL832662
)
(T-cell activation Rho GTPase-activating protein; T-cell activation GTPase-activating protein;)
genome : 159,456,059 - 159,466,057 (9,999)
query : 4 - 3,204 (3,201/3,220)
10 exons
identity = 0.998
3'(0.999;1.000;0.995;1.000;0.994;1.000;1.000;
1.000;1.000;0.993)5'
coverage = 0.998
InterPro :
IPR000198 : Rho GTPase-activating protein domain
IPR008936 : Rho GTPase activation protein
GO :
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006337)
HIX0006337
HIT000078732
(
AF385429
)
(T-cell activation Rho GTPase-activating protein; T-cell activation GTPase-activating protein;)
genome : 159,456,169 - 159,466,184 (10,016)
query : 1 - 3,218 (3,218/3,218)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000198 : Rho GTPase-activating protein domain
IPR008936 : Rho GTPase activation protein
GO :
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006337)
HIX0006337
HIT000078733
(
AF385430
)
(T-cell activation Rho GTPase-activating protein isoform a.)
genome : 159,456,169 - 159,466,184 (10,016)
query : 1 - 3,051 (3,051/3,051)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000198 : Rho GTPase-activating protein domain
IPR008936 : Rho GTPase activation protein
GO :
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 14.5, cyto 4, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006337)
HIX0006337
HIT000124792 (
ENST00000326965
)
(T-cell activation Rho GTPase-activating protein isoform a.)
genome : 159,456,169 - 159,466,184 (10,016)
query : 1 - 3,051 (3,051/3,051)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 14.5, cyto 4, golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006337)
HIX0006337
HIT000340002
(
BC111731
)
(T-cell activation Rho GTPase-activating protein; T-cell activation GTPase-activating protein;)
genome : 159,456,539 - 159,466,040 (9,502)
query : 1 - 2,704 (2,704/2,704)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000198 : Rho GTPase-activating protein domain
IPR008936 : Rho GTPase activation protein
GO :
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006337)
HIX0006337
HIT000493310
(
AK298686
)
(T-cell activation Rho GTPase-activating protein isoform a.)
genome : 159,457,051 - 159,463,371 (6,321)
query : 1 - 1,955 (1,955/2,018)
6 exons
identity = 0.996
3'(0.994;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.969
InterPro :
IPR000198 : Rho GTPase-activating protein domain
IPR008936 : Rho GTPase activation protein
GO :
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 13.5, cyto 9, extr 3, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006337)
HIX0006337
HIT000008546
(
AK025272
)
(T-cell activation Rho GTPase-activating protein; T-cell activation GTPase-activating protein;)
genome : 159,459,439 - 159,462,228 (2,790)
query : 1 - 2,790 (2,790/2,807)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
InterPro :
IPR000198 : Rho GTPase-activating protein domain
IPR008936 : Rho GTPase activation protein
GO :
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006337)
HIX0006337
HIT000212569 (
NM_138810
)
(T-cell activation Rho GTPase-activating protein isoform c.)
genome : 159,459,944 - 159,466,184 (6,241)
query : 1 - 1,317 (1,317/1,344)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 8, extr 2, mito 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006337)
HIX0006337
HIT000037364
(
BC015859
)
(T-cell activation Rho GTPase-activating protein isoform c.)
genome : 159,459,944 - 159,466,050 (6,107)
query : 5 - 1,187 (1,183/1,214)
8 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
0.993)5'
coverage = 0.997
InterPro :
IPR000198 : Rho GTPase-activating protein domain
IPR008936 : Rho GTPase activation protein
GO :
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 8, extr 2, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006337)
HIX0006337
HIT000130943 (
ENST00000338313
)
(T-cell activation Rho GTPase-activating protein isoform c.)
genome : 159,459,944 - 159,466,050 (6,107)
query : 1 - 1,183 (1,183/1,183)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 8, extr 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006337)
HIX0165796
HIT000544821 (
ENST00000446887
)
(Hypothetical short protein.)
genome : 159,485,760 - 159,486,305 (546)
query : 1 - 331 (331/331)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 9, cyto_nucl 8.83333, nucl 8.5, mito_nucl 8.5,
mito 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0165796)
HIX0165582
HIT000519095 (
ENST00000421161
)
(Hypothetical protein.)
genome : 159,528,823 - 159,537,085 (8,263)
query : 1 - 845 (845/845)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 15.5, cyto 9.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0165582)
HIX0165564
HIT000516998 (
ENST00000419064
)
(Hypothetical short protein.)
genome : 159,586,941 - 159,588,385 (1,445)
query : 1 - 385 (385/385)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0165564)
HIX0006338
HIT000340972
(
DQ009660
)
Representative transcript
(Fibronectin type III domain-containing protein 1; Activation-associated cDNA protein; Expressed in synovial lining protein; Precursor;)
genome : 159,590,429 - 159,693,140 (102,712)
query : 1 - 6,533 (6,533/6,560)
23 exons
identity = 0.997
5'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.957;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR003961 : Fibronectin type III
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 14, extr_plas 11, E.R. 7, plas 6, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006338)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK003938
Rattus
sp. (Rat) : DQ256268
Bos
sp. (Cow) : ENSBTAT00000039895
Macaca
sp. (Macaque) : ENSMMUT00000000734
Oryzias
sp. (Medaka) : ENSORLT00000016641
Pongo
sp. (Orangutan) : ENSPPYT00000019952
Monodelphis
sp. (Opossum) : XM_001381393
Equus
sp. (Horse) : XM_001500851
Pan
sp. (Chimpanzee) : XM_518834
Canis
sp. (Dog) : XM_541178
Bos
sp. (Cow) : XM_592756
Danio
sp. (Zebrafish) : XM_680979
HIX0006338
HIT000366915 (
NM_032532
)
(Fibronectin type III domain-containing protein 1; Activation-associated cDNA protein; Expressed in synovial lining protein; Precursor;)
genome : 159,590,429 - 159,693,140 (102,712)
query : 1 - 6,551 (6,551/6,578)
23 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 13, extr_plas 11, E.R. 8, plas 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006338)
HIX0006338
HIT000114756 (
ENST00000297267
)
(Fibronectin type III domain-containing protein 1; Activation-associated cDNA protein; Expressed in synovial lining protein; Precursor;)
genome : 159,590,429 - 159,693,141 (102,713)
query : 1 - 6,552 (6,552/6,552)
23 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 13, extr_plas 11, E.R. 8, plas 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006338)
HIX0006338
HIT000132996 (
ENST00000340366
)
(Fibronectin type III domain-containing protein 1 precursor.)
genome : 159,590,429 - 159,693,137 (102,709)
query : 1 - 6,359 (6,359/6,359)
22 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 14, extr_plas 11.5, plas 7, E.R. 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006338)
HIX0006338
HIT000435575
(
BC146783
)
(Fibronectin type III domain-containing protein 1 precursor.)
genome : 159,618,479 - 159,693,138 (74,660)
query : 1 - 6,017 (6,017/6,033)
21 exons
identity = 0.994
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.996;1.000;1.000;0.955;1.000;1.000;
0.991;1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR003961 : Fibronectin type III
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 15, cyto 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006338)
HIX0006338
HIT000001581
(
AB058769
)
(Fibronectin type III domain-containing protein 1 precursor.)
genome : 159,618,479 - 159,693,137 (74,659)
query : 1 - 6,016 (6,016/6,016)
21 exons
identity = 0.994
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.996;1.000;1.000;0.955;1.000;1.000;
0.991;1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 15, cyto 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006338)
HIX0006338
HIT000126218 (
ENST00000329629
)
(Fibronectin type III domain-containing protein 1 precursor.)
genome : 159,618,479 - 159,693,137 (74,659)
query : 1 - 6,034 (6,034/6,034)
21 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 16.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006338)
HIX0006338
HIT000503303
(
BC150607
)
(Fibronectin type III domain-containing protein 1 precursor.)
genome : 159,618,479 - 159,692,566 (74,088)
query : 1 - 5,652 (5,652/5,652)
22 exons
identity = 1.000
5'(1.000;0.989;1.000;1.000;1.000;1.000;1.000;
1.000;0.995;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR003961 : Fibronectin type III
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 15, cyto 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006338)
HIX0006338
HIT000584848 (
ENST00000480856
)
(Fibronectin type III domain-containing protein 1 precursor.)
genome : 159,639,329 - 159,647,586 (8,258)
query : 1 - 789 (789/789)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, extr 10, pero 3, cyto_nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006338)
HIX0006338
HIT000027322
(
AL832410
)
(Fibronectin type III domain-containing protein 1 precursor.)
genome : 159,655,128 - 159,693,140 (38,013)
query : 1 - 2,750 (2,750/2,833)
13 exons
identity = 0.990
5'(0.992;1.000;1.000;0.957;0.986;1.000;0.991;
1.000;1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR003961 : Fibronectin type III
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 8, mito 4, cyto_plas 4, cyto_golg 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006338)
HIX0006338
HIT000047508
(
AK127635
)
(Fibronectin type III domain-containing protein 1 precursor.)
genome : 159,655,337 - 159,693,134 (37,798)
query : 1 - 2,535 (2,535/2,535)
13 exons
identity = 0.991
5'(0.989;1.000;1.000;0.957;1.000;1.000;1.000;
1.000;1.000;1.000;0.988;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR003961 : Fibronectin type III
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006338)
HIX0006338
HIT000249165
(
AJ586132
)
(Fibronectin type III domain-containing protein 1 precursor.)
genome : 159,655,429 - 159,693,144 (37,716)
query : 5 - 2,456 (2,452/2,495)
13 exons
identity = 0.988
5'(1.000;1.000;1.000;0.955;1.000;1.000;0.987;
1.000;0.988;1.000;1.000;1.000;0.992)3'
coverage = 0.983
InterPro :
IPR003961 : Fibronectin type III
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 11, nucl 7.5, pero 4, mito 2,
E.R. 2, E.R._mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006338)
HIX0165570
HIT000517637 (
ENST00000419703
)
(Hypothetical short protein.)
genome : 159,661,818 - 159,664,361 (2,544)
query : 1 - 516 (516/516)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 4, cyto 4, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0165570)
HIX0165641
HIT000525394 (
ENST00000427460
)
(Conserved hypothetical protein.)
genome : 159,774,954 - 159,775,705 (752)
query : 1 - 420 (420/420)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 14.5, extr 9, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0165641)
HIX0165659
HIT000527591 (
ENST00000429657
)
(Hypothetical protein.)
genome : 159,804,563 - 159,817,475 (12,913)
query : 1 - 772 (772/772)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0165659)
HIX0165281
HIT000504908 (
ENST00000404609
)
(Ribosomal protein L21e family protein.)
genome : 159,947,080 - 159,947,560 (481)
query : 1 - 481 (481/481)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11, mito 9, extr 8, cyto 4, extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0165281)
HIX0165281
HIT000566343_11 (
ENST00000461458
)
(Ribosomal protein L21e family protein.)
genome : 159,947,080 - 159,947,560 (481)
query : 1 - 483 (483/483)
1 exon
identity = 0.957
3'(0.957)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 11.5, mito 10, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0165281)
HIX0164752
HIT000050036
(
AK130765
)
Representative transcript
(Conserved hypothetical protein.)
genome : 160,007,987 - 160,010,201 (2,215)
query : 1 - 2,002 (2,002/2,002)
2 exons
identity = 1.000
3'(0.999;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 17, extr 7, plas 4, nucl 2, mito 2, cysk_plas 2,
mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164752)
HIX0164752
HIT000528012 (
ENST00000430078
)
(Conserved hypothetical protein.)
genome : 160,007,987 - 160,010,201 (2,215)
query : 1 - 2,002 (2,002/2,002)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 17, extr 7, plas 4, nucl 2, mito 2, cysk_plas 2,
mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164752)
HIX0164752
HIT000390389
(
BC130599
)
(Conserved hypothetical protein.)
genome : 160,009,515 - 160,010,114 (600)
query : 1 - 600 (600/600)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 17, extr 7, plas 4, nucl 2, mito 2, cysk_plas 2,
mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164752)
HIX0164752
HIT000390391
(
BC130601
)
(Conserved hypothetical protein.)
genome : 160,009,515 - 160,010,114 (600)
query : 1 - 600 (600/600)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 17, extr 7, plas 4, nucl 2, mito 2, cysk_plas 2,
mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164752)
HIX0165646
HIT000525908 (
ENST00000427974
)
(Conserved hypothetical protein.)
genome : 160,060,339 - 160,061,133 (795)
query : 1 - 741 (741/741)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto_nucl 7.5, cyto 6, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0165646)
HIX0122802
HIT000459868
(
DQ593337
)
Representative transcript
(Non-protein coding transcript.)
genome : 160,088,132 - 160,088,163 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0122802)
HIX0216835
HIT000088899
(
BC016015
)
(Conserved hypothetical protein.)
genome : 160,100,151 - 160,101,403 (1,253)
query : 3 - 1,254 (1,252/1,273)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 7, cyto_nucl 7, nucl 5, mito 2, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216835)
HIX0216835
HIT000096989
(
BC041951
)
Representative transcript
(Conserved hypothetical protein.)
genome : 160,100,150 - 160,102,293 (2,144)
query : 1 - 2,141 (2,141/2,155)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, nucl 6, cyto 6, cyto_nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216835)
HIX0216835
HIT000086119
(
BC001980
)
(Conserved hypothetical protein.)
genome : 160,100,150 - 160,101,361 (1,212)
query : 33 - 1,244 (1,212/1,258)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 0.974
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 7, cyto_nucl 7, nucl 5, mito 2, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216835)
HIX0217091
HIT000634504 (
ENST00000535459
)
(Manganese/iron superoxide dismutase family protein.)
genome : 160,103,493 - 160,109,380 (5,888)
query : 1 - 581 (581/581)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 15, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217091)
HIX0216793
HIT000550618 (
ENST00000452684
)
(Manganese/iron superoxide dismutase family protein.)
genome : 160,111,951 - 160,114,276 (2,326)
query : 1 - 2,045 (2,045/2,045)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto 3.5, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216793)
HIX0216793
HIT000024168
(
AL050388
)
Representative transcript
(Manganese/iron superoxide dismutase family protein.)
genome : 160,112,030 - 160,114,276 (2,247)
query : 1 - 1,965 (1,965/1,984)
2 exons
identity = 0.997
3'(0.997;0.990)5'
coverage = 1.000
InterPro :
IPR001189 : Manganese/iron superoxide dismutase
IPR019831 : Manganese/iron superoxide dismutase, N-terminal
GO :
0004784 : Molecular Function : superoxide dismutase activity
0006801 : Biological Process : superoxide metabolic process
0046872 : Molecular Function : metal ion binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto 3.5, cyto_nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216793)
HIX0216793
HIT000037757
(
BC016934
)
(Manganese/iron superoxide dismutase family protein.)
genome : 160,112,387 - 160,114,263 (1,877)
query : 1 - 1,597 (1,597/1,617)
2 exons
identity = 0.997
3'(0.997;1.000)5'
coverage = 1.000
InterPro :
IPR001189 : Manganese/iron superoxide dismutase
IPR019831 : Manganese/iron superoxide dismutase, N-terminal
GO :
0004784 : Molecular Function : superoxide dismutase activity
0006801 : Biological Process : superoxide metabolic process
0046872 : Molecular Function : metal ion binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto_nucl 4.66667, cyto 4.5,
cyto_pero 4.33333, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216793)
HIX0006340
HIT000017427
(
AK092560
)
Representative transcript
(Conserved hypothetical protein.)
genome : 160,119,781 - 160,122,434 (2,654)
query : 1 - 2,655 (2,655/2,655)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 7, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006340)
HIX0165207
HIT000504434 (
ENST00000403291
)
(Nucleotide-binding alpha-beta plait domain containing protein.)
genome : 160,133,833 - 160,135,017 (1,185)
query : 1 - 1,185 (1,185/1,185)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 9, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0165207)
HIX0207527
HIT000615582 (
ENST00000516179
)
(Non-protein coding transcript.)
genome : 160,141,447 - 160,141,572 (126)
query : 1 - 126 (126/126)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0207527)
HIX0006341
HIT000214067 (
NM_152858
)
(Conserved hypothetical protein.)
genome : 160,148,030 - 160,170,453 (22,424)
query : 1 - 1,848 (1,848/1,856)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 17.5, cyto 11.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006341)
HIX0006341
HIT000724763 (
NM_001270532
)
(Conserved hypothetical protein.)
genome : 160,148,030 - 160,170,453 (22,424)
query : 1 - 1,628 (1,628/1,636)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 17.5, cyto 10.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006341)
HIX0006341
HIT000047695
(
AK127822
)
Representative transcript
(Pre-mRNA-splicing regulator WTAP isoform 2.)
genome : 160,148,129 - 160,170,355 (22,227)
query : 59 - 1,629 (1,571/1,629)
6 exons
identity = 0.997
5'(0.975;1.000;1.000;1.000;1.000;0.999)3'
coverage = 0.964
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 17.5, cyto 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006341)
HIX0006341
HIT000029572
(
BC000383
)
(Pre-mRNA-splicing regulator WTAP isoform 2.)
genome : 160,148,171 - 160,169,576 (21,406)
query : 1 - 830 (830/850)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 17.5, cyto 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006341)
HIX0006341
HIT000031938
(
BC004432
)
(Pre-mRNA-splicing regulator WTAP isoform 2.)
genome : 160,148,171 - 160,169,576 (21,406)
query : 1 - 830 (830/850)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 17.5, cyto 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006341)
HIX0006341
HIT000050938
(
BC028180
)
(Hypothetical protein.)
genome : 160,148,486 - 160,149,444 (959)
query : 11 - 968 (958/982)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 0.990
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 11.5, cyto 11.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006341)
HIX0006341
HIT000214066 (
NM_152857
)
(Conserved hypothetical protein.)
genome : 160,148,532 - 160,170,453 (21,922)
query : 1 - 1,716 (1,716/1,724)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 17.5, cyto 11.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006341)
HIX0006341
HIT000724764 (
NM_001270533
)
(Conserved hypothetical protein.)
genome : 160,148,532 - 160,170,453 (21,922)
query : 1 - 1,496 (1,496/1,504)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 17.5, cyto 10.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006341)
HIX0006341
HIT000597909 (
ENST00000494513
)
(Hypothetical short protein.)
genome : 160,148,562 - 160,157,750 (9,189)
query : 1 - 635 (635/635)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 23, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006341)
HIX0006341
HIT000042158
(
D14661
)
(Pre-mRNA-splicing regulator WTAP isoform 2.)
genome : 160,148,620 - 160,170,447 (21,828)
query : 1 - 1,622 (1,622/1,622)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 17.5, cyto 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006341)
HIX0006341
HIT000130481 (
ENST00000337387
)
(Conserved hypothetical protein.)
genome : 160,148,620 - 160,170,447 (21,828)
query : 1 - 1,622 (1,622/1,622)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 17.5, cyto 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006341)
HIX0006342
HIT000008079
(
AK024805
)
Representative transcript
(Conserved hypothetical protein.)
genome : 160,150,521 - 160,152,173 (1,653)
query : 74 - 1,726 (1,653/1,745)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 0.958
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006342)
HIX0006341
HIT000566961 (
ENST00000462110
)
(Conserved hypothetical protein.)
genome : 160,162,625 - 160,164,726 (2,102)
query : 1 - 584 (584/584)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 4, mito 4, mito_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006341)
HIX0006341
HIT000075987
(
AF277190
)
(Conserved hypothetical protein.)
genome : 160,164,768 - 160,169,897 (5,130)
query : 1 - 731 (731/733)
2 exons
identity = 0.989
5'(1.000;0.988)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11.5, nucl 9.5, extr 5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006341)
HIX0006341
HIT000642641_02 (
ENST00000543596
)
(Hypothetical protein.)
genome : 160,164,783 - 160,169,405 (4,623)
query : 1 - 225 (225/225)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11.5, nucl 9.5, extr 5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006341)
HIX0216859
HIT000306221
(
CR627456
)
Representative transcript
(Conserved hypothetical protein.)
genome : 160,172,234 - 160,177,350 (5,117)
query : 1 - 3,706 (3,706/3,765)
2 exons
identity = 0.996
5'(0.994;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216859)
HIX0216859
HIT000249681
(
AK131393
)
(Conserved hypothetical protein.)
genome : 160,173,650 - 160,177,342 (3,693)
query : 1 - 2,280 (2,280/2,291)
2 exons
identity = 1.000
5'(0.999;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216859)
HIX0078319
HIT000262835
(
BC067868
)
Representative transcript
(Conserved hypothetical protein.)
genome : 160,181,292 - 160,183,364 (2,073)
query : 1 - 1,715 (1,715/1,782)
2 exons
identity = 0.996
3'(0.996;0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0078319)
HIX0078319
HIT000634417 (
ENST00000535372
)
(Conserved hypothetical protein.)
genome : 160,181,290 - 160,183,364 (2,075)
query : 1 - 1,718 (1,718/1,718)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0078319)
HIX0078319
HIT000659735 (
NR_037166
)
(Conserved hypothetical protein.)
genome : 160,181,290 - 160,183,364 (2,075)
query : 1 - 1,718 (1,718/1,718)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, extr 6, cyto_nucl 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0078319)
HIX0200848
HIT000348328 (
ENST00000367048
)
(Thiolase family protein.)
genome : 160,181,360 - 160,200,087 (18,728)
query : 1 - 3,180 (3,180/3,180)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
pero 15, cyto 5, E.R._mito 5, mito 3.5, E.R. 3.5,
plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200848)
HIX0200848
HIT000202541 (
NM_005891
)
(Thiolase family protein.)
genome : 160,182,989 - 160,200,086 (17,098)
query : 1 - 1,550 (1,550/1,567)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.9
KEGG pathway :
00071 : Fatty acid metabolism (28)
00072 : Synthesis and degradation of ketone bodies (6)
00280 : Valine, leucine and isoleucine degradation (34)
00310 : Lysine degradation (49)
00362 : Benzoate degradation (53)
00380 : Tryptophan metabolism (54)
00620 : Pyruvate metabolism (62)
00630 : Glyoxylate and dicarboxylate metabolism (63)
00640 : Propanoate metabolism (45)
00650 : Butanoate metabolism (47)
00720 : Carbon fixation pathways in prokaryotes (41)
00900 : Terpenoid backbone biosynthesis (42)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
pero 15, cyto 5, E.R._mito 5, mito 3.5, E.R. 3.5,
plas 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200848)
HIX0200848
HIT000078299
(
AF356877
)
(Acetyl-CoA acetyltransferase, cytosolic; EC=2.3.1.9; Acetyl-CoA transferase-like protein; Cytosolic acetoacetyl-CoA thiolase;)
genome : 160,183,066 - 160,200,055 (16,990)
query : 1 - 1,442 (1,442/1,442)
9 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.992)3'
coverage = 1.000
EC number :
EC 2.3.1.9
KEGG pathway :
00071 : Fatty acid metabolism (28)
00072 : Synthesis and degradation of ketone bodies (6)
00280 : Valine, leucine and isoleucine degradation (34)
00310 : Lysine degradation (49)
00362 : Benzoate degradation (53)
00380 : Tryptophan metabolism (54)
00620 : Pyruvate metabolism (62)
00630 : Glyoxylate and dicarboxylate metabolism (63)
00640 : Propanoate metabolism (45)
00650 : Butanoate metabolism (47)
00720 : Carbon fixation pathways in prokaryotes (41)
00900 : Terpenoid backbone biosynthesis (42)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002155 : Thiolase
IPR016038 : Thiolase-like, subgroup
IPR016039 : Thiolase-like
IPR020610 : Thiolase, active site
IPR020613 : Thiolase, conserved site
IPR020616 : Thiolase, N-terminal
IPR020617 : Thiolase, C-terminal
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
0016747 : Molecular Function : transferase activity, transferring acyl groups other than amino-acyl groups
SOSUI :
SOLUBLE PROTEIN
PSORT :
pero 15, cyto 5, E.R._mito 5, mito 3.5, E.R. 3.5,
plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200848)
HIX0200848
HIT000384374
(
AK225244
)
(Acetyl-CoA acetyltransferase, cytosolic; EC=2.3.1.9; Acetyl-CoA transferase-like protein; Cytosolic acetoacetyl-CoA thiolase;)
genome : 160,183,076 - 160,199,871 (16,796)
query : 1 - 1,248 (1,248/1,248)
9 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.993;1.000;0.994;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.9
KEGG pathway :
00071 : Fatty acid metabolism (28)
00072 : Synthesis and degradation of ketone bodies (6)
00280 : Valine, leucine and isoleucine degradation (34)
00310 : Lysine degradation (49)
00362 : Benzoate degradation (53)
00380 : Tryptophan metabolism (54)
00620 : Pyruvate metabolism (62)
00630 : Glyoxylate and dicarboxylate metabolism (63)
00640 : Propanoate metabolism (45)
00650 : Butanoate metabolism (47)
00720 : Carbon fixation pathways in prokaryotes (41)
00900 : Terpenoid backbone biosynthesis (42)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002155 : Thiolase
IPR016038 : Thiolase-like, subgroup
IPR016039 : Thiolase-like
IPR020610 : Thiolase, active site
IPR020613 : Thiolase, conserved site
IPR020616 : Thiolase, N-terminal
IPR020617 : Thiolase, C-terminal
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
0016747 : Molecular Function : transferase activity, transferring acyl groups other than amino-acyl groups
SOSUI :
SOLUBLE PROTEIN
PSORT :
pero 19, cyto 6.5, cyto_mito 4.5, plas 2, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200848)
HIX0200848
HIT000216358
(
S70154
)
Representative transcript
(Acetyl-CoA acetyltransferase, cytosolic; EC=2.3.1.9; Acetyl-CoA transferase-like protein; Cytosolic acetoacetyl-CoA thiolase;)
genome : 160,183,085 - 160,200,086 (17,002)
query : 3 - 1,479 (1,477/1,490)
9 exons
identity = 0.982
5'(1.000;1.000;1.000;1.000;0.993;1.000;0.987;
1.000;0.943)3'
coverage = 0.999
EC number :
EC 2.3.1.9
KEGG pathway :
00071 : Fatty acid metabolism (28)
00072 : Synthesis and degradation of ketone bodies (6)
00280 : Valine, leucine and isoleucine degradation (34)
00310 : Lysine degradation (49)
00362 : Benzoate degradation (53)
00380 : Tryptophan metabolism (54)
00620 : Pyruvate metabolism (62)
00630 : Glyoxylate and dicarboxylate metabolism (63)
00640 : Propanoate metabolism (45)
00650 : Butanoate metabolism (47)
00720 : Carbon fixation pathways in prokaryotes (41)
00900 : Terpenoid backbone biosynthesis (42)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002155 : Thiolase
IPR016038 : Thiolase-like, subgroup
IPR016039 : Thiolase-like
IPR020610 : Thiolase, active site
IPR020613 : Thiolase, conserved site
IPR020616 : Thiolase, N-terminal
IPR020617 : Thiolase, C-terminal
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
0016747 : Molecular Function : transferase activity, transferring acyl groups other than amino-acyl groups
SOSUI :
SOLUBLE PROTEIN
PSORT :
pero 15, E.R._mito 5, cyto 4, mito 3.5, E.R. 3.5,
cyto_plas 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200848)
HIX0200848
HIT000423877
(
AK291080
)
(Acetyl-CoA acetyltransferase, cytosolic; EC=2.3.1.9; Acetyl-CoA transferase-like protein; Cytosolic acetoacetyl-CoA thiolase;)
genome : 160,183,088 - 160,200,078 (16,991)
query : 1 - 1,443 (1,443/1,443)
9 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.994;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.9
KEGG pathway :
00071 : Fatty acid metabolism (28)
00072 : Synthesis and degradation of ketone bodies (6)
00280 : Valine, leucine and isoleucine degradation (34)
00310 : Lysine degradation (49)
00362 : Benzoate degradation (53)
00380 : Tryptophan metabolism (54)
00620 : Pyruvate metabolism (62)
00630 : Glyoxylate and dicarboxylate metabolism (63)
00640 : Propanoate metabolism (45)
00650 : Butanoate metabolism (47)
00720 : Carbon fixation pathways in prokaryotes (41)
00900 : Terpenoid backbone biosynthesis (42)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002155 : Thiolase
IPR016038 : Thiolase-like, subgroup
IPR016039 : Thiolase-like
IPR020610 : Thiolase, active site
IPR020613 : Thiolase, conserved site
IPR020616 : Thiolase, N-terminal
IPR020617 : Thiolase, C-terminal
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
0016747 : Molecular Function : transferase activity, transferring acyl groups other than amino-acyl groups
SOSUI :
SOLUBLE PROTEIN
PSORT :
pero 15, cyto 5, E.R._mito 5, mito 3.5, E.R. 3.5,
plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200848)
HIX0200848
HIT000384219
(
AK225089
)
(Acetyl-CoA acetyltransferase, cytosolic; EC=2.3.1.9; Acetyl-CoA transferase-like protein; Cytosolic acetoacetyl-CoA thiolase;)
genome : 160,183,088 - 160,199,928 (16,841)
query : 1 - 1,293 (1,293/1,309)
9 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.993;1.000;0.994;
0.991;1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.9
KEGG pathway :
00071 : Fatty acid metabolism (28)
00072 : Synthesis and degradation of ketone bodies (6)
00280 : Valine, leucine and isoleucine degradation (34)
00310 : Lysine degradation (49)
00362 : Benzoate degradation (53)
00380 : Tryptophan metabolism (54)
00620 : Pyruvate metabolism (62)
00630 : Glyoxylate and dicarboxylate metabolism (63)
00640 : Propanoate metabolism (45)
00650 : Butanoate metabolism (47)
00720 : Carbon fixation pathways in prokaryotes (41)
00900 : Terpenoid backbone biosynthesis (42)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002155 : Thiolase
IPR016038 : Thiolase-like, subgroup
IPR016039 : Thiolase-like
IPR020610 : Thiolase, active site
IPR020613 : Thiolase, conserved site
IPR020616 : Thiolase, N-terminal
IPR020617 : Thiolase, C-terminal
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
0016747 : Molecular Function : transferase activity, transferring acyl groups other than amino-acyl groups
SOSUI :
SOLUBLE PROTEIN
PSORT :
pero 21, plas 4, extr_plas 4, extr 2, E.R. 2,
cyto_mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200848)
HIX0200848
HIT000328928
(
AB208993
)
(Acetyl-CoA acetyltransferase, cytosolic; EC=2.3.1.9; Acetyl-CoA transferase-like protein; Cytosolic acetoacetyl-CoA thiolase;)
genome : 160,183,099 - 160,200,082 (16,984)
query : 1 - 1,436 (1,436/1,436)
9 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.993;1.000;0.994;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.9
KEGG pathway :
00071 : Fatty acid metabolism (28)
00072 : Synthesis and degradation of ketone bodies (6)
00280 : Valine, leucine and isoleucine degradation (34)
00310 : Lysine degradation (49)
00362 : Benzoate degradation (53)
00380 : Tryptophan metabolism (54)
00620 : Pyruvate metabolism (62)
00630 : Glyoxylate and dicarboxylate metabolism (63)
00640 : Propanoate metabolism (45)
00650 : Butanoate metabolism (47)
00720 : Carbon fixation pathways in prokaryotes (41)
00900 : Terpenoid backbone biosynthesis (42)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002155 : Thiolase
IPR016038 : Thiolase-like, subgroup
IPR016039 : Thiolase-like
IPR020610 : Thiolase, active site
IPR020613 : Thiolase, conserved site
IPR020616 : Thiolase, N-terminal
IPR020617 : Thiolase, C-terminal
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
0016747 : Molecular Function : transferase activity, transferring acyl groups other than amino-acyl groups
SOSUI :
SOLUBLE PROTEIN
PSORT :
pero 13, cyto 8, E.R._mito 4.5, plas 4, cyto_nucl 4,
cyto_golg 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200848)
HIX0200848
HIT000029595
(
BC000408
)
(Acetyl-CoA acetyltransferase, cytosolic; EC=2.3.1.9; Acetyl-CoA transferase-like protein; Cytosolic acetoacetyl-CoA thiolase;)
genome : 160,183,109 - 160,200,083 (16,975)
query : 1 - 1,427 (1,427/1,443)
9 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.993;1.000;0.994;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.9
KEGG pathway :
00071 : Fatty acid metabolism (28)
00072 : Synthesis and degradation of ketone bodies (6)
00280 : Valine, leucine and isoleucine degradation (34)
00310 : Lysine degradation (49)
00362 : Benzoate degradation (53)
00380 : Tryptophan metabolism (54)
00620 : Pyruvate metabolism (62)
00630 : Glyoxylate and dicarboxylate metabolism (63)
00640 : Propanoate metabolism (45)
00650 : Butanoate metabolism (47)
00720 : Carbon fixation pathways in prokaryotes (41)
00900 : Terpenoid backbone biosynthesis (42)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002155 : Thiolase
IPR016038 : Thiolase-like, subgroup
IPR016039 : Thiolase-like
IPR020610 : Thiolase, active site
IPR020613 : Thiolase, conserved site
IPR020616 : Thiolase, N-terminal
IPR020617 : Thiolase, C-terminal
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
0016747 : Molecular Function : transferase activity, transferring acyl groups other than amino-acyl groups
SOSUI :
SOLUBLE PROTEIN
PSORT :
pero 17, E.R._mito 5, mito 3.5, E.R. 3.5, plas 3,
extr 3, extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200848)
HIX0200848
HIT000488897
(
AK294273
)
(Acetyl-CoA acetyltransferase, cytosolic; EC=2.3.1.9; Acetyl-CoA transferase-like protein; Cytosolic acetoacetyl-CoA thiolase;)
genome : 160,183,511 - 160,200,144 (16,634)
query : 1 - 1,723 (1,723/1,723)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.9
KEGG pathway :
00071 : Fatty acid metabolism (28)
00072 : Synthesis and degradation of ketone bodies (6)
00280 : Valine, leucine and isoleucine degradation (34)
00310 : Lysine degradation (49)
00362 : Benzoate degradation (53)
00380 : Tryptophan metabolism (54)
00620 : Pyruvate metabolism (62)
00630 : Glyoxylate and dicarboxylate metabolism (63)
00640 : Propanoate metabolism (45)
00650 : Butanoate metabolism (47)
00720 : Carbon fixation pathways in prokaryotes (41)
00900 : Terpenoid backbone biosynthesis (42)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002155 : Thiolase
IPR016038 : Thiolase-like, subgroup
IPR016039 : Thiolase-like
IPR020610 : Thiolase, active site
IPR020613 : Thiolase, conserved site
IPR020616 : Thiolase, N-terminal
IPR020617 : Thiolase, C-terminal
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
0016747 : Molecular Function : transferase activity, transferring acyl groups other than amino-acyl groups
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, nucl 6, cyto 4, E.R. 4, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200848)
HIX0200848
HIT000640481 (
ENST00000541436
)
(Thiolase family protein.)
genome : 160,183,511 - 160,200,144 (16,634)
query : 1 - 1,723 (1,723/1,723)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, nucl 6, cyto 4, E.R. 4, plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200848)
HIX0200848
HIT000572541 (
ENST00000467951
)
(Thiolase, N-terminal domain containing protein.)
genome : 160,183,527 - 160,196,339 (12,813)
query : 1 - 856 (856/856)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 8.5, cyto_nucl 7.5, extr_plas 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200848)
HIX0200848
HIT000011615
(
AK055001
)
(Thiolase family protein.)
genome : 160,196,318 - 160,200,078 (3,761)
query : 1 - 1,641 (1,641/1,641)
4 exons
identity = 0.999
5'(0.999;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002155 : Thiolase
IPR016038 : Thiolase-like, subgroup
IPR016039 : Thiolase-like
IPR020610 : Thiolase, active site
IPR020613 : Thiolase, conserved site
IPR020616 : Thiolase, N-terminal
IPR020617 : Thiolase, C-terminal
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
0016747 : Molecular Function : transferase activity, transferring acyl groups other than amino-acyl groups
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, E.R._mito 7.33333, mito 7, E.R. 6.5,
mito_pero 5.83333, pero 3.5, plas 2, cyto 2, cyto_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200848)
HIX0200848
HIT000576449 (
ENST00000472052
)
(Thiolase family protein.)
genome : 160,196,318 - 160,200,078 (3,761)
query : 1 - 1,641 (1,641/1,641)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, E.R._mito 7.33333, mito 7, E.R. 6.5,
mito_pero 5.83333, pero 3.5, plas 2, cyto 2, cyto_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200848)
HIX0006344
HIT000209907 (
NM_030752
)
(Chaperonin Cpn60/TCP-1 family protein.)
genome : 160,199,530 - 160,210,735 (11,206)
query : 1 - 2,453 (2,453/2,463)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cysk 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006344)
HIX0006344
HIT000316614 (
NM_001008897
)
(Chaperonin Cpn60/TCP-1 family protein.)
genome : 160,199,530 - 160,210,735 (11,206)
query : 1 - 2,367 (2,367/2,377)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, mito 9, nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006344)
HIX0006344
HIT000122764 (
ENST00000321394
)
(Chaperonin Cpn60/TCP-1 family protein.)
genome : 160,199,530 - 160,210,781 (11,252)
query : 1 - 2,499 (2,499/2,499)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cysk 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006344)
HIX0006344
HIT000321801
(
X52882
)
(T-complex protein 1 subunit alpha; TCP-1-alpha; CCT-alpha;)
genome : 160,199,749 - 160,210,521 (10,773)
query : 1 - 2,019 (2,019/2,019)
12 exons
identity = 0.995
3'(0.982;1.000;1.000;1.000;1.000;1.000;1.000;
0.991;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002194 : Chaperonin TCP-1, conserved site
IPR002423 : Chaperonin Cpn60/TCP-1 family
IPR017998 : Chaperone tailless complex polypeptide 1 (TCP-1)
IPR027409 : GroEL-like apical domain
IPR027410 : TCP-1-like chaperonin intermediate domain
IPR027413 : GroEL-like equatorial domain
GO :
0005524 : Molecular Function : ATP binding
0006457 : Biological Process : protein folding
0044267 : Biological Process : cellular protein metabolic process
0051082 : Molecular Function : unfolded protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cysk 7, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006344)
HIX0006344
HIT000029818
(
BC000665
)
Representative transcript
(T-complex protein 1 subunit alpha; TCP-1-alpha; CCT-alpha;)
genome : 160,199,986 - 160,210,617 (10,632)
query : 9 - 1,887 (1,879/1,919)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.996
InterPro :
IPR002194 : Chaperonin TCP-1, conserved site
IPR002423 : Chaperonin Cpn60/TCP-1 family
IPR017998 : Chaperone tailless complex polypeptide 1 (TCP-1)
IPR027409 : GroEL-like apical domain
IPR027410 : TCP-1-like chaperonin intermediate domain
IPR027413 : GroEL-like equatorial domain
GO :
0005524 : Molecular Function : ATP binding
0006457 : Biological Process : protein folding
0044267 : Biological Process : cellular protein metabolic process
0051082 : Molecular Function : unfolded protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cysk 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006344)
HIX0006344
HIT000321477
(
X14986
)
(Non-protein coding transcript.)
genome : 160,199,987 - 160,200,043 (57)
query : 1 - 57 (57/57)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006344)
HIX0006344
HIT000643300 (
ENST00000544255
)
(Chaperonin Cpn60/TCP-1 family protein.)
genome : 160,199,996 - 160,210,628 (10,633)
query : 1 - 1,403 (1,403/1,403)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006344)
HIX0006344
HIT000518828 (
ENST00000420894
)
(Chaperonin Cpn60/TCP-1 family protein.)
genome : 160,200,017 - 160,210,604 (10,588)
query : 1 - 1,671 (1,671/1,671)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cysk 11, nucl 2, mito 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006344)
HIX0006344
HIT000475660 (
ENST00000392168
)
(Chaperonin Cpn60/TCP-1 family protein.)
genome : 160,200,019 - 160,210,735 (10,717)
query : 1 - 1,878 (1,878/1,878)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, mito 9, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006344)
HIX0006344
HIT000431470
(
AK312604
)
(T-complex protein 1 subunit alpha; TCP-1-alpha; CCT-alpha;)
genome : 160,200,077 - 160,210,704 (10,628)
query : 1 - 1,875 (1,875/1,875)
12 exons
identity = 0.998
3'(1.000;1.000;1.000;0.992;0.994;1.000;1.000;
1.000;0.990;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002194 : Chaperonin TCP-1, conserved site
IPR002423 : Chaperonin Cpn60/TCP-1 family
IPR017998 : Chaperone tailless complex polypeptide 1 (TCP-1)
IPR027409 : GroEL-like apical domain
IPR027410 : TCP-1-like chaperonin intermediate domain
IPR027413 : GroEL-like equatorial domain
GO :
0005524 : Molecular Function : ATP binding
0006457 : Biological Process : protein folding
0044267 : Biological Process : cellular protein metabolic process
0051082 : Molecular Function : unfolded protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cysk 7, nucl 2, mito 2, mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006344)
HIX0006344
HIT000099889
(
BT006969
)
(T-complex protein 1 subunit alpha; TCP-1-alpha; CCT-alpha;)
genome : 160,200,079 - 160,210,500 (10,422)
query : 1 - 1,669 (1,669/1,671)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR002194 : Chaperonin TCP-1, conserved site
IPR002423 : Chaperonin Cpn60/TCP-1 family
IPR017998 : Chaperone tailless complex polypeptide 1 (TCP-1)
IPR027409 : GroEL-like apical domain
IPR027410 : TCP-1-like chaperonin intermediate domain
IPR027413 : GroEL-like equatorial domain
GO :
0005524 : Molecular Function : ATP binding
0006457 : Biological Process : protein folding
0044267 : Biological Process : cellular protein metabolic process
0051082 : Molecular Function : unfolded protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cysk 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006344)
HIX0006344
HIT000645249 (
ENST00000546204
)
(Chaperonin Cpn60/TCP-1 family protein.)
genome : 160,200,624 - 160,201,293 (670)
query : 1 - 566 (566/566)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20.5, cyto_mito 13, cyto_pero 4.16667, cyto 4,
extr 3, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006344)
HIX0006344
HIT000638801 (
ENST00000539756
)
(Chaperonin Cpn60/TCP-1 family protein.)
genome : 160,200,948 - 160,210,617 (9,670)
query : 1 - 780 (780/780)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, pero 4, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006344)
HIX0006344
HIT000367235 (
NR_002960
)
(Non-protein coding transcript.)
genome : 160,201,282 - 160,201,413 (132)
query : 1 - 132 (132/132)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006344)
HIX0006344
HIT000383005
(
AJ609459
)
(Non-protein coding transcript.)
genome : 160,201,282 - 160,201,413 (132)
query : 1 - 132 (132/132)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006344)
HIX0006344
HIT000470654 (
ENST00000384662
)
(Non-protein coding transcript.)
genome : 160,201,282 - 160,201,413 (132)
query : 1 - 132 (132/132)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006344)
HIX0006344
HIT000635852 (
ENST00000536807
)
(Chaperonin Cpn60/TCP-1 family protein.)
genome : 160,202,057 - 160,206,357 (4,301)
query : 1 - 873 (873/873)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 10, nucl 3, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006344)
HIX0006344
HIT000642577 (
ENST00000543532
)
(Chaperonin Cpn60/TCP-1 family protein.)
genome : 160,205,022 - 160,210,704 (5,683)
query : 1 - 561 (561/561)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 13, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006344)
HIX0006344
HIT000637575 (
ENST00000538530
)
(Chaperonin Cpn60/TCP-1 family protein.)
genome : 160,205,022 - 160,210,616 (5,595)
query : 1 - 918 (918/918)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 10.5, extr 6, mito 4, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006344)
HIX0006344
HIT000572150 (
ENST00000467544
)
(Chaperonin Cpn60/TCP-1 family protein.)
genome : 160,205,708 - 160,206,903 (1,196)
query : 1 - 658 (658/658)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, extr 3, nucl 3, mito 3, mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006344)
HIX0006344
HIT000637173 (
ENST00000538128
)
(Chaperonin Cpn60/TCP-1 family protein.)
genome : 160,205,831 - 160,210,704 (4,874)
query : 1 - 557 (557/557)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10, cyto 9.5, cyto_nucl 8.5, nucl 6.5, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006344)
HIX0006344
HIT000642562 (
ENST00000543517
)
(Chaperonin Cpn60/TCP-1 family protein.)
genome : 160,205,843 - 160,210,634 (4,792)
query : 1 - 561 (561/561)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 13, nucl 4.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006344)
HIX0006344
HIT000638993 (
ENST00000539948
)
(Chaperonin Cpn60/TCP-1 family protein.)
genome : 160,206,432 - 160,209,471 (3,040)
query : 1 - 706 (706/706)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 12.3333, cyto_plas 10.5, extr 5,
mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006344)
HIX0006344
HIT000644809 (
ENST00000545764
)
(Chaperonin Cpn60/TCP-1 family protein.)
genome : 160,206,450 - 160,209,306 (2,857)
query : 1 - 709 (709/709)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 12, extr 7, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006344)
HIX0006344
HIT000367240 (
NR_002965
)
(Non-protein coding transcript.)
genome : 160,206,626 - 160,206,765 (140)
query : 1 - 140 (140/140)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006344)
HIX0006344
HIT000383018
(
AJ609472
)
(Non-protein coding transcript.)
genome : 160,206,626 - 160,206,765 (140)
query : 1 - 140 (140/140)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006344)
HIX0006344
HIT000470195 (
ENST00000384183
)
(Non-protein coding transcript.)
genome : 160,206,626 - 160,206,765 (140)
query : 1 - 140 (140/140)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006344)
HIX0006344
HIT000636435 (
ENST00000537390
)
(Chaperonin Cpn60/TCP-1 family protein.)
genome : 160,206,927 - 160,210,704 (3,778)
query : 1 - 673 (673/691)
5 exons
identity = 0.999
3'(0.990;1.000;1.000;1.000;1.000)5'
coverage = 0.974
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 14, cyto_plas 12.8333, extr 3,
nucl 3, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006344)
HIX0006344
HIT000635439 (
ENST00000536394
)
(Chaperonin Cpn60/TCP-1 family protein.)
genome : 160,206,969 - 160,209,900 (2,932)
query : 1 - 535 (535/535)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_plas 11.6667, cyto_nucl 11.5, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006344)
HIX0006344
HIT000635652 (
ENST00000536607
)
(Chaperonin Cpn60/TCP-1 family protein.)
genome : 160,208,776 - 160,210,608 (1,833)
query : 1 - 572 (572/572)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15.5, extr 12, cyto_nucl 9, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006344)
HIX0006344
HIT000645068 (
ENST00000546023
)
(Hypothetical short protein.)
genome : 160,209,469 - 160,210,705 (1,237)
query : 1 - 1,135 (1,135/1,135)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 10, extr 8, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006344)
HIX0006344
HIT000427417
(
AK308551
)
(Hypothetical short protein.)
genome : 160,209,469 - 160,210,704 (1,236)
query : 1 - 1,134 (1,134/1,134)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 10, extr 8, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006344)
HIX0006345
HIT000581002 (
ENST00000476826
)
(39S ribosomal protein L18, mitochondrial; L18mt; MRP-L18; Precursor;)
genome : 160,210,844 - 160,219,345 (8,502)
query : 1 - 758 (758/758)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto_nucl 8, cyto 7, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006345)
HIX0006345
HIT000583689 (
ENST00000479638
)
(39S ribosomal protein L18, mitochondrial; L18mt; MRP-L18; Precursor;)
genome : 160,210,918 - 160,218,436 (7,519)
query : 1 - 600 (600/600)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 13, nucl 8.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006345)
HIX0006345
HIT000430257
(
AK311391
)
(39S ribosomal protein L18, mitochondrial; L18mt; MRP-L18; Precursor;)
genome : 160,211,022 - 160,219,361 (8,340)
query : 1 - 888 (888/888)
5 exons
identity = 0.998
5'(0.986;0.992;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR005484 : Ribosomal protein L18/L5
GO :
0003735 : Molecular Function : structural constituent of ribosome
0005622 : Cellular Component : intracellular
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 13, extr 10, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006345)
HIX0006345
HIT000204566 (
NM_014161
)
(39S ribosomal protein L18, mitochondrial; L18mt; MRP-L18; Precursor;)
genome : 160,211,492 - 160,219,461 (7,970)
query : 1 - 977 (977/994)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20.5, cyto_mito 14.1667, cyto 6.5,
cyto_pero 4.83333
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006345)
HIX0006345
HIT000002154
(
AF161556
)
(39S ribosomal protein L18, mitochondrial; L18mt; MRP-L18; Precursor;)
genome : 160,211,498 - 160,219,460 (7,963)
query : 2 - 968 (967/968)
4 exons
identity = 0.995
5'(0.971;1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20.5, cyto_mito 13.1667, cyto 4.5,
cyto_pero 3.83333, extr 3, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006345)
HIX0006345
HIT000348314 (
ENST00000367034
)
(39S ribosomal protein L18, mitochondrial; L18mt; MRP-L18; Precursor;)
genome : 160,211,498 - 160,219,468 (7,971)
query : 1 - 978 (978/978)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20.5, cyto_mito 14.1667, cyto 6.5,
cyto_pero 4.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006345)
HIX0006345
HIT000030525
(
BC001623
)
Representative transcript
(39S ribosomal protein L18, mitochondrial; L18mt; MRP-L18; Precursor;)
genome : 160,211,507 - 160,219,461 (7,955)
query : 1 - 962 (962/980)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR005484 : Ribosomal protein L18/L5
GO :
0003735 : Molecular Function : structural constituent of ribosome
0005622 : Cellular Component : intracellular
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20.5, cyto_mito 14.1667, cyto 6.5,
cyto_pero 4.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006345)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB172555
Mus
sp. (Mouse) : AK003104
Danio
sp. (Zebrafish) : BC124672
Gallus
sp. (Chicken) : BX934122
Tetraodon
sp. (Tetraodon) : CR707738
Pongo
sp. (Orangutan) : ENSPPYT00000019959
Takifugu
sp. (Fugu) : SINFRUT00000144663
Rattus
sp. (Rat) : XM_001062578
Pan
sp. (Chimpanzee) : XM_001150906
Monodelphis
sp. (Opossum) : XM_001381420
Equus
sp. (Horse) : XM_001500639
Canis
sp. (Dog) : XM_533465
HIX0006345
HIT000025229
(
AL136633
)
(39S ribosomal protein L18, mitochondrial; L18mt; MRP-L18; Precursor;)
genome : 160,211,532 - 160,219,459 (7,928)
query : 5 - 939 (935/957)
4 exons
identity = 0.999
5'(1.000;0.995;1.000;1.000)3'
coverage = 0.995
InterPro :
IPR005484 : Ribosomal protein L18/L5
GO :
0003735 : Molecular Function : structural constituent of ribosome
0005622 : Cellular Component : intracellular
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20.5, cyto_mito 14.1667, cyto 6.5,
cyto_pero 4.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006345)
HIX0006345
HIT000584836 (
ENST00000480842
)
(39S ribosomal protein L18, mitochondrial; L18mt; MRP-L18; Precursor;)
genome : 160,211,549 - 160,219,468 (7,920)
query : 1 - 1,075 (1,075/1,075)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 13, extr 10, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006345)
HIX0006345
HIT000268339
(
CR533491
)
(39S ribosomal protein L18, mitochondrial; L18mt; MRP-L18; Precursor;)
genome : 160,211,620 - 160,219,243 (7,624)
query : 1 - 631 (631/631)
4 exons
identity = 0.998
5'(1.000;0.995;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR005484 : Ribosomal protein L18/L5
GO :
0003735 : Molecular Function : structural constituent of ribosome
0005622 : Cellular Component : intracellular
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20.5, cyto_mito 14.1667, cyto 6.5,
cyto_pero 4.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006345)
HIX0200859
HIT000725096 (
NM_001271862
)
(Poly(A)-specific ribonuclease PARN-like domain-containing protein 1 isoform 1.)
genome : 160,221,281 - 160,241,736 (20,456)
query : 1 - 1,842 (1,842/1,859)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 12, nucl 6.5, E.R. 3, pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200859)
HIX0200859
HIT000111287 (
ENST00000275275
)
(Poly(A)-specific ribonuclease PARN-like domain-containing protein 1 isoform 2 precursor.)
genome : 160,221,301 - 160,241,736 (20,436)
query : 1 - 1,921 (1,921/1,921)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 22, extr_plas 4.5, plas 4, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200859)
HIX0200859
HIT000022413
(
AK097559
)
Representative transcript
(Poly(A)-specific ribonuclease PARN-like domain-containing protein 1 isoform 2 precursor.)
genome : 160,221,301 - 160,241,735 (20,435)
query : 1 - 1,920 (1,920/1,920)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006941 : Ribonuclease CAF1
IPR012337 : Ribonuclease H-like domain
GO :
0003676 : Molecular Function : nucleic acid binding
0005634 : Cellular Component : nucleus
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 22, extr_plas 4.5, plas 4, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200859)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK139523
Rattus
sp. (Rat) : BC099137
Pongo
sp. (Orangutan) : CR860419
Bos
sp. (Cow) : ENSBTAT00000020180
Canis
sp. (Dog) : ENSCAFT00000001145
Gallus
sp. (Chicken) : ENSGALT00000018991
Monodelphis
sp. (Opossum) : XM_001381424
Equus
sp. (Horse) : XM_001491627
Pan
sp. (Chimpanzee) : XM_518838
Macaca
sp. (Macaque) : XR_011794
HIX0200859
HIT000214901 (
NM_173516
)
(Poly(A)-specific ribonuclease PARN-like domain-containing protein 1 isoform 2 precursor.)
genome : 160,221,301 - 160,241,735 (20,435)
query : 1 - 1,920 (1,920/1,920)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 22, extr_plas 4.5, plas 4, extr 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200859)
HIX0200859
HIT000018006
(
AK093139
)
(Poly(A)-specific ribonuclease PARN-like domain-containing protein 1 isoform 1.)
genome : 160,221,306 - 160,241,735 (20,430)
query : 3 - 1,818 (1,816/1,818)
19 exons
identity = 0.999
5'(1.000;1.000;0.986;1.000;0.992;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR006941 : Ribonuclease CAF1
IPR012337 : Ribonuclease H-like domain
GO :
0003676 : Molecular Function : nucleic acid binding
0005634 : Cellular Component : nucleus
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 12, nucl 6.5, E.R. 3, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200859)
HIX0200859
HIT000475659 (
ENST00000392167
)
(Poly(A)-specific ribonuclease PARN-like domain-containing protein 1 isoform 1.)
genome : 160,221,306 - 160,241,735 (20,430)
query : 1 - 1,816 (1,816/1,816)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 12, nucl 6.5, E.R. 3, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200859)
HIX0200859
HIT000340375
(
BC112246
)
(Poly(A)-specific ribonuclease PARN-like domain-containing protein 1 isoform 2 precursor.)
genome : 160,221,704 - 160,241,614 (19,911)
query : 19 - 1,703 (1,685/1,703)
18 exons
identity = 0.999
5'(1.000;1.000;1.000;0.992;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 0.989
InterPro :
IPR006941 : Ribonuclease CAF1
IPR012337 : Ribonuclease H-like domain
GO :
0003676 : Molecular Function : nucleic acid binding
0005634 : Cellular Component : nucleus
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 22, extr_plas 4.5, plas 4, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200859)
HIX0122516
HIT000447273
(
DQ580742
)
Representative transcript
(Non-protein coding transcript.)
genome : 160,248,605 - 160,248,636 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0122516)
HIX0165704
HIT000532496 (
ENST00000434562
)
(Hypothetical short protein.)
genome : 160,320,218 - 160,323,542 (3,325)
query : 1 - 595 (595/595)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0165704)
HIX0032929
HIT000194206
(
M13150
)
Representative transcript
(Proto-oncogene Mas;)
genome : 160,327,722 - 160,329,108 (1,387)
query : 1 - 1,388 (1,388/1,388)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
InterPro :
IPR000820 : Proto-oncogene Mas
IPR026234 : Mas-related G protein-coupled receptor family
GO :
0004930 : Molecular Function : G-protein coupled receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032929)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK030265
Rattus
sp. (Rat) : BC078884
Canis
sp. (Dog) : ENSCAFT00000001147
Macaca
sp. (Macaque) : XM_001098523
Bos
sp. (Cow) : XM_001251665
Monodelphis
sp. (Opossum) : XM_001371382
Gallus
sp. (Chicken) : XM_426151
Pan
sp. (Chimpanzee) : XM_527553
HIX0032929
HIT000263314
(
BC069142
)
(Proto-oncogene Mas;)
genome : 160,327,973 - 160,329,108 (1,136)
query : 1 - 1,136 (1,136/1,136)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR000820 : Proto-oncogene Mas
IPR026234 : Mas-related G protein-coupled receptor family
GO :
0004930 : Molecular Function : G-protein coupled receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032929)
HIX0032929
HIT000106341 (
ENST00000252660
)
(Proto-oncogene Mas;)
genome : 160,327,974 - 160,329,108 (1,135)
query : 1 - 1,135 (1,135/1,135)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032929)
HIX0032929
HIT000199274 (
NM_002377
)
(Proto-oncogene Mas;)
genome : 160,327,974 - 160,329,108 (1,135)
query : 1 - 1,135 (1,135/1,135)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032929)
HIX0032929
HIT000263732
(
BC069581
)
(Proto-oncogene Mas;)
genome : 160,327,974 - 160,329,015 (1,042)
query : 1 - 1,042 (1,042/1,042)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR000820 : Proto-oncogene Mas
IPR026234 : Mas-related G protein-coupled receptor family
GO :
0004930 : Molecular Function : G-protein coupled receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032929)
HIX0032929
HIT000339550
(
BC110454
)
(Proto-oncogene Mas;)
genome : 160,327,974 - 160,329,015 (1,042)
query : 1 - 1,042 (1,042/1,042)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
InterPro :
IPR000820 : Proto-oncogene Mas
IPR026234 : Mas-related G protein-coupled receptor family
GO :
0004930 : Molecular Function : G-protein coupled receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032929)
HIX0032929
HIT000269129
(
CR542261
)
(Proto-oncogene Mas;)
genome : 160,327,988 - 160,328,965 (978)
query : 1 - 978 (978/978)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
InterPro :
IPR000820 : Proto-oncogene Mas
IPR026234 : Mas-related G protein-coupled receptor family
GO :
0004930 : Molecular Function : G-protein coupled receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032929)
HIX0033007
HIT000197886 (
NM_000876
)
(Cation-independent mannose-6-phosphate receptor; CI Man-6-P receptor; CI-MPR; M6PR; 300 kDa mannose 6-phosphate receptor; MPR 300; Insulin-like growth factor 2 receptor; Insulin-like growth factor II receptor; IGF-II receptor; M6P/IGF2 receptor; M6P/IGF2R; AltName: CD_antigen=CD222; Precursor;)
genome : 160,390,131 - 160,527,583 (137,453)
query : 1 - 9,091 (9,091/9,093)
48 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.980;0.978;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.996;1.000;
1.000;1.000;1.000;1.000;0.996;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 7, nucl 7, pero 6, extr_plas 5.5, mito 3.5,
cyto_mito 3.5, lyso 3, cyto 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033007)
HIX0033007
HIT000325277
(
Y00285
)
Representative transcript
(Cation-independent mannose-6-phosphate receptor; CI Man-6-P receptor; CI-MPR; M6PR; 300 kDa mannose 6-phosphate receptor; MPR 300; Insulin-like growth factor 2 receptor; Insulin-like growth factor II receptor; IGF-II receptor; M6P/IGF2 receptor; M6P/IGF2R; AltName: CD_antigen=CD222; Precursor;)
genome : 160,390,131 - 160,527,583 (137,453)
query : 1 - 9,088 (9,088/9,090)
48 exons
identity = 0.998
5'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.993;
0.980;0.978;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.996;0.995;
1.000;1.000;1.000;1.000;0.996;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR000479 : Cation-independent mannose-6-phosphate receptor
IPR000562 : Fibronectin, type II, collagen-binding
IPR009011 : Mannose-6-phosphate receptor binding domain
IPR013806 : Kringle-like fold
GO :
0005215 : Molecular Function : transporter activity
0005737 : Cellular Component : cytoplasm
0006810 : Biological Process : transport
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 7, nucl 7, pero 6, extr_plas 5.5, mito 3.5,
cyto_mito 3.5, lyso 3, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033007)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : AF342811
Danio
sp. (Zebrafish) : AY570286
Canis
sp. (Dog) : AY965264
Macaca
sp. (Macaque) : ENSMMUT00000039885
Pongo
sp. (Orangutan) : ENSPPYT00000019962
Tetraodon
sp. (Tetraodon) : GSTENT00018498001
Takifugu
sp. (Fugu) : SINFRUT00000146917
Mus
sp. (Mouse) : U04710
Gallus
sp. (Chicken) : U35037
Rattus
sp. (Rat) : U59809
Monodelphis
sp. (Opossum) : XM_001371399
Equus
sp. (Horse) : XM_001491469
Pan
sp. (Chimpanzee) : XR_024128
HIX0033007
HIT000310875 (
ENST00000356956
)
(Cation-independent mannose-6-phosphate receptor; CI Man-6-P receptor; CI-MPR; M6PR; 300 kDa mannose 6-phosphate receptor; MPR 300; Insulin-like growth factor 2 receptor; Insulin-like growth factor II receptor; IGF-II receptor; M6P/IGF2 receptor; M6P/IGF2R; AltName: CD_antigen=CD222; Precursor;)
genome : 160,390,131 - 160,527,583 (137,453)
query : 1 - 9,091 (9,091/9,091)
48 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.980;0.978;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 7, nucl 7, pero 6, extr_plas 5.5, mito 3.5,
cyto_mito 3.5, lyso 3, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033007)
HIX0033007
HIT000191166
(
J03528
)
(Cation-independent mannose-6-phosphate receptor; CI Man-6-P receptor; CI-MPR; M6PR; 300 kDa mannose 6-phosphate receptor; MPR 300; Insulin-like growth factor 2 receptor; Insulin-like growth factor II receptor; IGF-II receptor; M6P/IGF2 receptor; M6P/IGF2R; AltName: CD_antigen=CD222; Precursor;)
genome : 160,390,132 - 160,527,581 (137,450)
query : 1 - 9,081 (9,081/9,081)
48 exons
identity = 0.996
5'(0.993;1.000;1.000;1.000;1.000;0.992;1.000;
1.000;1.000;1.000;1.000;0.993;1.000;1.000;
0.980;0.972;1.000;1.000;0.994;1.000;0.990;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.992;1.000;0.996;1.000;
1.000;1.000;1.000;1.000;0.996;0.985;0.991;
1.000;0.979;1.000;0.993;0.971;0.995)3'
coverage = 1.000
InterPro :
IPR000479 : Cation-independent mannose-6-phosphate receptor
IPR000562 : Fibronectin, type II, collagen-binding
IPR009011 : Mannose-6-phosphate receptor binding domain
IPR013806 : Kringle-like fold
GO :
0005215 : Molecular Function : transporter activity
0005737 : Cellular Component : cytoplasm
0006810 : Biological Process : transport
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 7, nucl 7, pero 6, extr_plas 5.5, mito 3.5,
cyto_mito 3.5, lyso 3, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033007)
HIX0033007
HIT000329603
(
AB209668
)
(Cation-independent mannose-6-phosphate receptor precursor.)
genome : 160,412,296 - 160,526,531 (114,236)
query : 1 - 7,662 (7,662/7,662)
47 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.980;
0.972;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.996;1.000;1.000;
1.000;1.000;1.000;0.996;1.000;0.983;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000479 : Cation-independent mannose-6-phosphate receptor
IPR000562 : Fibronectin, type II, collagen-binding
IPR009011 : Mannose-6-phosphate receptor binding domain
IPR013806 : Kringle-like fold
GO :
0005215 : Molecular Function : transporter activity
0005737 : Cellular Component : cytoplasm
0006810 : Biological Process : transport
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10.5, cyto_mito 8.66667, cyto_plas 8.66667,
plas 6.5, nucl 6, mito 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033007)
HIX0165894
HIT000712943 (
ENST00000601203
)
(Conserved hypothetical protein.)
genome : 160,424,323 - 160,428,696 (4,374)
query : 1 - 4,374 (4,374/4,374)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito 7, cyto 5.5, mito_nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0165894)
HIX0165894
HIT000726913 (
NR_047514
)
(Conserved hypothetical protein.)
genome : 160,424,323 - 160,428,696 (4,374)
query : 1 - 4,374 (4,374/4,374)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito 7, cyto 5.5, mito_nucl 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0165894)
HIX0217137
HIT000726910 (
NR_047511
)
(Conserved hypothetical protein.)
genome : 160,424,323 - 160,428,696 (4,374)
query : 1 - 1,489 (1,489/1,489)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito 9, cyto_nucl 4.33333, cyto 4, nucl 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217137)
HIX0165894
HIT000559150
(
GQ166646
)
Representative transcript
(Hypothetical short protein.)
genome : 160,425,324 - 160,425,601 (278)
query : 1 - 278 (278/278)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, extr 10, nucl 4, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0165894)
HIX0033007
HIT000569374 (
ENST00000464636
)
(Cation-independent mannose-6-phosphate receptor; CI Man-6-P receptor; CI-MPR; M6PR; 300 kDa mannose 6-phosphate receptor; MPR 300; Insulin-like growth factor 2 receptor; Insulin-like growth factor II receptor; IGF-II receptor; M6P/IGF2 receptor; M6P/IGF2R; AltName: CD_antigen=CD222; Precursor;)
genome : 160,431,370 - 160,445,725 (14,356)
query : 1 - 570 (570/570)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 7, nucl 2, mito 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033007)
HIX0006347
HIT000003244
(
AK000769
)
Representative transcript
(Conserved hypothetical protein.)
genome : 160,455,851 - 160,457,778 (1,928)
query : 1 - 1,928 (1,928/1,928)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 11.5, cyto_nucl 10.6667, cyto 6.5,
extr_plas 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006347)
HIX0033007
HIT000583500 (
ENST00000479434
)
(Cation-independent mannose-6-phosphate receptor; CI Man-6-P receptor; CI-MPR; M6PR; 300 kDa mannose 6-phosphate receptor; MPR 300; Insulin-like growth factor 2 receptor; Insulin-like growth factor II receptor; IGF-II receptor; AltName: CD_antigen=CD222; Precursor;)
genome : 160,466,881 - 160,477,480 (10,600)
query : 1 - 544 (544/544)
6 exons
identity = 0.987
5'(1.000;0.980;0.978;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 9, nucl 7, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033007)
HIX0033007
HIT000216918
(
S80783
)
(Non-protein coding transcript.)
genome : 160,490,977 - 160,491,048 (72)
query : 1 - 72 (72/72)
1 exon
identity = 0.986
5'(0.986)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033007)
HIX0033007
HIT000216919
(
S80785
)
(Non-protein coding transcript.)
genome : 160,490,977 - 160,491,048 (72)
query : 1 - 72 (72/72)
1 exon
identity = 0.986
5'(0.986)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033007)
HIX0033007
HIT000591304 (
ENST00000487607
)
(Cation-independent mannose-6-phosphate receptor; CI Man-6-P receptor; CI-MPR; M6PR; 300 kDa mannose 6-phosphate receptor; MPR 300; Insulin-like growth factor 2 receptor; Insulin-like growth factor II receptor; IGF-II receptor; M6P/IGF2 receptor; M6P/IGF2R; AltName: CD_antigen=CD222; Precursor;)
genome : 160,494,448 - 160,495,093 (646)
query : 1 - 359 (359/359)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24.5, extr_plas 14, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033007)
HIX0033007
HIT000495472
(
AK300848
)
(Cation-independent mannose-6-phosphate receptor; CI Man-6-P receptor; CI-MPR; M6PR; 300 kDa mannose 6-phosphate receptor; MPR 300; Insulin-like growth factor 2 receptor; Insulin-like growth factor II receptor; IGF-II receptor; M6P/IGF2 receptor; M6P/IGF2R; AltName: CD_antigen=CD222; Precursor;)
genome : 160,499,232 - 160,510,981 (11,750)
query : 20 - 867 (848/867)
7 exons
identity = 0.989
5'(1.000;1.000;0.992;0.871;1.000;1.000;1.000)3'
coverage = 0.978
InterPro :
IPR000479 : Cation-independent mannose-6-phosphate receptor
IPR000562 : Fibronectin, type II, collagen-binding
IPR009011 : Mannose-6-phosphate receptor binding domain
IPR013806 : Kringle-like fold
GO :
0005215 : Molecular Function : transporter activity
0005737 : Cellular Component : cytoplasm
0006810 : Biological Process : transport
0016021 : Cellular Component : integral component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 9.33333, cyto 8.5, nucl 8,
cyto_pero 5.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033007)
HIX0033007
HIT000216923
(
S80797
)
(Hypothetical short protein.)
genome : 160,505,202 - 160,505,410 (209)
query : 1 - 209 (209/225)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.929
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033007)
HIX0033007
HIT000580057 (
ENST00000475834
)
(Cation-independent mannose-6-phosphate receptor; CI Man-6-P receptor; CI-MPR; M6PR; 300 kDa mannose 6-phosphate receptor; MPR 300; Insulin-like growth factor 2 receptor; Insulin-like growth factor II receptor; IGF-II receptor; M6P/IGF2 receptor; M6P/IGF2R; AltName: CD_antigen=CD222; Precursor;)
genome : 160,506,093 - 160,511,372 (5,280)
query : 1 - 758 (758/758)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 11.8333, cyto_pero 9.66667,
extr 6, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033007)
HIX0032844
HIT000398527 (
NR_003288
)
(Calcineurin B homologous protein 1; Calcineurin B-like protein; Calcium-binding protein CHP; Calcium-binding protein p22; EF-hand calcium-binding domain-containing protein p22;)
genome : 160,514,114 - 160,517,244 (3,131)
query : 1 - 3,131 (3,131/3,131)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 11, nucl 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032844)
HIX0032844
HIT000682045 (
ENST00000569097
)
(Calcineurin B homologous protein 1; Calcineurin B-like protein; Calcium-binding protein CHP; Calcium-binding protein p22; EF-hand calcium-binding domain-containing protein p22;)
genome : 160,514,114 - 160,517,244 (3,131)
query : 1 - 3,131 (3,131/3,131)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 11, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032844)
HIX0032844
HIT000022186
(
AK097332
)
Representative transcript
(Calcineurin B homologous protein 1; Calcineurin B-like protein; Calcium-binding protein CHP; Calcium-binding protein p22; EF-hand calcium-binding domain-containing protein p22;)
genome : 160,514,114 - 160,515,929 (1,816)
query : 1 - 1,816 (1,816/1,816)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
InterPro :
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
IPR018247 : EF-Hand 1, calcium-binding site
GO :
0005509 : Molecular Function : calcium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 11, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032844)
HIX0032844
HIT000092701
(
BC032536
)
(Calcineurin B homologous protein 1; Calcineurin B-like protein; Calcium-binding protein CHP; Calcium-binding protein p22; EF-hand calcium-binding domain-containing protein p22;)
genome : 160,514,153 - 160,515,930 (1,778)
query : 1 - 1,778 (1,778/1,798)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
InterPro :
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
IPR018247 : EF-Hand 1, calcium-binding site
GO :
0005509 : Molecular Function : calcium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 11, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032844)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : BC103418
Oryzias
sp. (Medaka) : ENSORLT00000011998
Monodelphis
sp. (Opossum) : XM_001370957
Rattus
sp. (Rat) : XM_575825
Macaca
sp. (Macaque) : XR_012169
Pan
sp. (Chimpanzee) : XR_021178
HIX0032844
HIT000347553 (
ENST00000366273
)
(Calcineurin B homologous protein 1; Calcineurin B-like protein; Calcium-binding protein CHP; Calcium-binding protein p22; EF-hand calcium-binding domain-containing protein p22;)
genome : 160,514,455 - 160,515,025 (571)
query : 1 - 571 (571/571)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 11, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032844)
HIX0006348
HIT000021588
(
AK096733
)
Representative transcript
(Conserved hypothetical protein.)
genome : 160,515,069 - 160,517,244 (2,176)
query : 1 - 2,176 (2,176/2,176)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006348)
HIX0033007
HIT000579818 (
ENST00000475584
)
(Cation-independent mannose-6-phosphate receptor; CI Man-6-P receptor; CI-MPR; M6PR; 300 kDa mannose 6-phosphate receptor; MPR 300; Insulin-like growth factor 2 receptor; Insulin-like growth factor II receptor; IGF-II receptor; M6P/IGF2 receptor; M6P/IGF2R; AltName: CD_antigen=CD222; Precursor;)
genome : 160,517,479 - 160,534,539 (17,061)
query : 1 - 597 (597/597)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 18, pero 4, plas 3, mito 3, E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033007)
HIX0033155
HIT000087444
(
BC010121
)
Representative transcript
(Conserved hypothetical protein.)
genome : 160,529,651 - 160,532,533 (2,883)
query : 1 - 2,883 (2,883/2,900)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 5, cyto_nucl 3.33333, cyto_pero 3.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0033155)
HIX0032993
HIT000348243 (
ENST00000366963
)
(Solute carrier family 22 member 1; Organic cation transporter 1; hOCT1;)
genome : 160,542,821 - 160,579,750 (36,930)
query : 1 - 1,948 (1,948/1,948)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032993)
HIX0032993
HIT000199924 (
NM_003057
)
(Solute carrier family 22 member 1; Organic cation transporter 1; hOCT1;)
genome : 160,542,863 - 160,579,749 (36,887)
query : 1 - 1,905 (1,905/1,921)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032993)
HIX0032993
HIT000214194 (
NM_153187
)
(Solute carrier family 22 member 1 isoform b.)
genome : 160,542,863 - 160,579,749 (36,887)
query : 1 - 1,792 (1,792/1,808)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032993)
HIX0032993
HIT000325074
(
X98332
)
(Solute carrier family 22 member 1; Organic cation transporter 1; hOCT1;)
genome : 160,542,896 - 160,579,749 (36,854)
query : 1 - 1,872 (1,872/1,888)
11 exons
identity = 0.999
5'(0.998;0.990;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004749 : Organic cation transport protein
IPR005828 : General substrate transporter
IPR005829 : Sugar transporter, conserved site
IPR020846 : Major facilitator superfamily domain
GO :
0005215 : Molecular Function : transporter activity
0006810 : Biological Process : transport
0015075 : Molecular Function : ion transmembrane transporter activity
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
0022857 : Molecular Function : transmembrane transporter activity
0034220 : Biological Process : ion transmembrane transport
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032993)
HIX0032993
HIT000388956
(
BC126364
)
(Solute carrier family 22 member 1; Organic cation transporter 1; hOCT1;)
genome : 160,542,897 - 160,579,635 (36,739)
query : 1 - 1,757 (1,757/1,757)
11 exons
identity = 0.999
5'(1.000;0.990;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004749 : Organic cation transport protein
IPR005828 : General substrate transporter
IPR005829 : Sugar transporter, conserved site
IPR020846 : Major facilitator superfamily domain
GO :
0005215 : Molecular Function : transporter activity
0006810 : Biological Process : transport
0015075 : Molecular Function : ion transmembrane transporter activity
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
0022857 : Molecular Function : transmembrane transporter activity
0034220 : Biological Process : ion transmembrane transport
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032993)
HIX0032993
HIT000422684
(
AK289887
)
(Solute carrier family 22 member 1; Organic cation transporter 1; hOCT1;)
genome : 160,542,905 - 160,579,748 (36,844)
query : 1 - 1,859 (1,859/1,859)
11 exons
identity = 0.996
5'(0.996;0.990;1.000;1.000;1.000;1.000;0.981;
1.000;0.991;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004749 : Organic cation transport protein
IPR005828 : General substrate transporter
IPR005829 : Sugar transporter, conserved site
IPR020846 : Major facilitator superfamily domain
GO :
0005215 : Molecular Function : transporter activity
0006810 : Biological Process : transport
0015075 : Molecular Function : ion transmembrane transporter activity
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
0022857 : Molecular Function : transmembrane transporter activity
0034220 : Biological Process : ion transmembrane transport
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032993)
HIX0032993
HIT000221327
(
U77086
)
Representative transcript
(Solute carrier family 22 member 1; Organic cation transporter 1; hOCT1;)
genome : 160,542,918 - 160,579,749 (36,832)
query : 4 - 1,853 (1,850/1,870)
11 exons
identity = 0.998
5'(0.993;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 0.998
InterPro :
IPR004749 : Organic cation transport protein
IPR005828 : General substrate transporter
IPR005829 : Sugar transporter, conserved site
IPR020846 : Major facilitator superfamily domain
GO :
0005215 : Molecular Function : transporter activity
0006810 : Biological Process : transport
0015075 : Molecular Function : ion transmembrane transporter activity
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
0022857 : Molecular Function : transmembrane transporter activity
0034220 : Biological Process : ion transmembrane transport
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032993)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC021651
Danio
sp. (Zebrafish) : BC054608
Bos
sp. (Cow) : BC151505
Canis
sp. (Dog) : ENSCAFT00000001164
Pongo
sp. (Orangutan) : ENSPPYT00000019963
Tetraodon
sp. (Tetraodon) : GSTENT00018493001
Takifugu
sp. (Fugu) : SINFRUT00000167690
Rattus
sp. (Rat) : X78855
Macaca
sp. (Macaque) : XM_001098823
Monodelphis
sp. (Opossum) : XM_001371425
Equus
sp. (Horse) : XM_001491414
Pan
sp. (Chimpanzee) : XM_527554
HIX0032993
HIT000638308 (
ENST00000539263
)
(Solute carrier family 22 member 1; Organic cation transporter 1; hOCT1;)
genome : 160,542,931 - 160,579,614 (36,684)
query : 1 - 1,598 (1,598/1,598)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26.5, extr_plas 15, plas 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032993)
HIX0032993
HIT000565815 (
ENST00000460902
)
(Solute carrier family 22 member 1; Organic cation transporter 1; hOCT1;)
genome : 160,542,968 - 160,579,748 (36,781)
query : 1 - 1,484 (1,484/1,484)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032993)
HIX0032993
HIT000555404 (
ENST00000457470
)
(Solute carrier family 22 member 1; Organic cation transporter 1; hOCT1;)
genome : 160,542,968 - 160,579,614 (36,647)
query : 1 - 1,452 (1,452/1,452)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032993)
HIX0032993
HIT000124047 (
ENST00000324965
)
(Solute carrier family 22 member 1 isoform b.)
genome : 160,542,968 - 160,579,583 (36,616)
query : 1 - 1,521 (1,521/1,521)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032993)
HIX0032993
HIT000639488 (
ENST00000540443
)
(Solute carrier family 22 member 1; Organic cation transporter 1; hOCT1;)
genome : 160,550,793 - 160,555,039 (4,247)
query : 1 - 653 (653/653)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032993)
HIX0032993
HIT000582704 (
ENST00000478607
)
(Solute carrier family 22 member 1; Organic cation transporter 1; hOCT1;)
genome : 160,576,986 - 160,579,750 (2,765)
query : 1 - 324 (324/324)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 27, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032993)
HIX0201002
HIT000504036 (
ENST00000402250
)
(Conserved hypothetical protein.)
genome : 160,584,571 - 160,584,787 (217)
query : 1 - 217 (217/217)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 10, cyto_nucl 9.66667,
cyto_pero 7.33333, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201002)
HIX0025014
HIT000590643 (
ENST00000486916
)
(Conserved hypothetical protein.)
genome : 160,592,093 - 160,666,573 (74,481)
query : 1 - 1,017 (1,017/1,017)
6 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025014)
HIX0006339
HIT000637228 (
ENST00000538183
)
(Superoxide dismutase [Mn], mitochondrial; EC=1.15.1.1; Precursor;)
genome : 160,100,096 - 160,114,360 (14,265)
query : 1 - 4,259 (4,259/4,259)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.15.1.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006339)
HIX0006339
HIT000645305 (
ENST00000546260
)
(Superoxide dismutase [Mn], mitochondrial; EC=1.15.1.1;)
genome : 160,100,096 - 160,114,273 (14,178)
query : 1 - 4,302 (4,302/4,302)
5 exons
identity = 0.999
3'(1.000;1.000;1.000;0.985;1.000)5'
coverage = 1.000
EC number :
EC 1.15.1.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006339)
HIX0006339
HIT000348335 (
ENST00000367055
)
(Superoxide dismutase [Mn], mitochondrial; EC=1.15.1.1; Precursor;)
genome : 160,100,096 - 160,114,266 (14,171)
query : 1 - 990 (990/990)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.15.1.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006339)
HIX0006339
HIT000035810
(
BC012423
)
Representative transcript
(Superoxide dismutase [Mn], mitochondrial; EC=1.15.1.1; Precursor;)
genome : 160,100,150 - 160,114,256 (14,107)
query : 1 - 926 (926/940)
6 exons
identity = 0.999
3'(0.994;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.15.1.1
InterPro :
IPR001189 : Manganese/iron superoxide dismutase
IPR019831 : Manganese/iron superoxide dismutase, N-terminal
IPR019832 : Manganese/iron superoxide dismutase, C-terminal
IPR019833 : Manganese/iron superoxide dismutase, binding site
GO :
0004784 : Molecular Function : superoxide dismutase activity
0006801 : Biological Process : superoxide metabolic process
0046872 : Molecular Function : metal ion binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006339)
Ortholog candidate ( ->
Evola
)
Equus
sp. (Horse) : AB001693
Pan
sp. (Chimpanzee) : AB087274
Gallus
sp. (Chicken) : AF329270
Danio
sp. (Zebrafish) : BC060895
Mus
sp. (Mouse) : BC066063
Rattus
sp. (Rat) : BC070913
Tetraodon
sp. (Tetraodon) : CR701575
Bos
sp. (Cow) : ENSBTAT00000008569
Oryzias
sp. (Medaka) : ENSORLT00000016614
Pongo
sp. (Orangutan) : ENSPPYT00000019953
Takifugu
sp. (Fugu) : SINFRUT00000152842
Monodelphis
sp. (Opossum) : XM_001381405
Canis
sp. (Dog) : XM_533463
HIX0006339
HIT000093893
(
BC035422
)
(Superoxide dismutase [Mn], mitochondrial; EC=1.15.1.1; Precursor;)
genome : 160,100,150 - 160,114,256 (14,107)
query : 1 - 926 (926/940)
6 exons
identity = 0.999
3'(0.994;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.15.1.1
InterPro :
IPR001189 : Manganese/iron superoxide dismutase
IPR019831 : Manganese/iron superoxide dismutase, N-terminal
IPR019832 : Manganese/iron superoxide dismutase, C-terminal
IPR019833 : Manganese/iron superoxide dismutase, binding site
GO :
0004784 : Molecular Function : superoxide dismutase activity
0006801 : Biological Process : superoxide metabolic process
0046872 : Molecular Function : metal ion binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006339)
HIX0006339
HIT000365693 (
NM_001024465
)
(Superoxide dismutase [Mn], mitochondrial; EC=1.15.1.1; Precursor;)
genome : 160,100,150 - 160,114,353 (14,204)
query : 1 - 1,023 (1,023/1,035)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.15.1.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006339)
HIX0006339
HIT000365694 (
NM_001024466
)
(Superoxide dismutase [Mn], mitochondrial; EC=1.15.1.1;)
genome : 160,100,150 - 160,114,353 (14,204)
query : 1 - 906 (906/918)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.15.1.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006339)
HIX0006339
HIT000348334 (
ENST00000367054
)
(Superoxide dismutase [Mn], mitochondrial; EC=1.15.1.1;)
genome : 160,100,148 - 160,114,260 (14,113)
query : 1 - 815 (815/815)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.15.1.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006339)
HIX0006339
HIT000022249
(
AK097395
)
(Superoxide dismutase [Mn], mitochondrial; EC=1.15.1.1;)
genome : 160,100,151 - 160,183,561 (83,411)
query : 5 - 2,555 (2,551/2,555)
8 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.993)5'
coverage = 0.998
EC number :
EC 1.15.1.1
InterPro :
IPR001189 : Manganese/iron superoxide dismutase
IPR019831 : Manganese/iron superoxide dismutase, N-terminal
IPR019832 : Manganese/iron superoxide dismutase, C-terminal
IPR019833 : Manganese/iron superoxide dismutase, binding site
GO :
0004784 : Molecular Function : superoxide dismutase activity
0006801 : Biological Process : superoxide metabolic process
0046872 : Molecular Function : metal ion binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006339)
Ortholog candidate ( ->
Evola
)
Equus
sp. (Horse) : AB001693
Pan
sp. (Chimpanzee) : AB087274
Gallus
sp. (Chicken) : AF329270
Danio
sp. (Zebrafish) : BC060895
Mus
sp. (Mouse) : BC066063
Rattus
sp. (Rat) : BC070913
Tetraodon
sp. (Tetraodon) : CR701575
Bos
sp. (Cow) : ENSBTAT00000008569
Oryzias
sp. (Medaka) : ENSORLT00000016614
Pongo
sp. (Orangutan) : ENSPPYT00000019953
Takifugu
sp. (Fugu) : SINFRUT00000152842
Monodelphis
sp. (Opossum) : XM_001381405
Canis
sp. (Dog) : XM_533463
HIX0006339
HIT000645132 (
ENST00000546087
)
(Superoxide dismutase [Mn], mitochondrial; EC=1.15.1.1;)
genome : 160,100,151 - 160,183,561 (83,411)
query : 1 - 2,558 (2,558/2,558)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 1.15.1.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006339)
HIX0006339
HIT000325291
(
Y00472
)
(Superoxide dismutase [Mn], mitochondrial; EC=1.15.1.1; Precursor;)
genome : 160,100,258 - 160,114,266 (14,009)
query : 1 - 828 (828/829)
6 exons
identity = 0.993
3'(0.986;1.000;0.994;1.000;0.995;0.967)5'
coverage = 0.999
EC number :
EC 1.15.1.1
InterPro :
IPR001189 : Manganese/iron superoxide dismutase
IPR019831 : Manganese/iron superoxide dismutase, N-terminal
IPR019832 : Manganese/iron superoxide dismutase, C-terminal
IPR019833 : Manganese/iron superoxide dismutase, binding site
GO :
0004784 : Molecular Function : superoxide dismutase activity
0006801 : Biological Process : superoxide metabolic process
0046872 : Molecular Function : metal ion binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006339)
HIX0006339
HIT000197664 (
NM_000636
)
(Superoxide dismutase [Mn], mitochondrial; EC=1.15.1.1; Precursor;)
genome : 160,102,755 - 160,114,353 (11,599)
query : 1 - 1,593 (1,593/1,593)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.15.1.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006339)
HIX0006339
HIT000499390
(
AK304766
)
(Superoxide dismutase [Mn], mitochondrial; EC=1.15.1.1;)
genome : 160,103,171 - 160,114,273 (11,103)
query : 1 - 917 (917/917)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.15.1.1
InterPro :
IPR001189 : Manganese/iron superoxide dismutase
IPR019831 : Manganese/iron superoxide dismutase, N-terminal
IPR019832 : Manganese/iron superoxide dismutase, C-terminal
IPR019833 : Manganese/iron superoxide dismutase, binding site
GO :
0004784 : Molecular Function : superoxide dismutase activity
0006801 : Biological Process : superoxide metabolic process
0046872 : Molecular Function : metal ion binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto 5, nucl 3, cyto_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006339)
HIX0006339
HIT000542880 (
ENST00000444946
)
(Superoxide dismutase [Mn], mitochondrial; EC=1.15.1.1;)
genome : 160,103,171 - 160,114,273 (11,103)
query : 1 - 917 (917/917)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.15.1.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto 5, nucl 3, cyto_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006339)
HIX0006339
HIT000321281
(
X07834
)
(Superoxide dismutase [Mn], mitochondrial; EC=1.15.1.1; Precursor;)
genome : 160,103,172 - 160,114,203 (11,032)
query : 1 - 1,026 (1,026/1,026)
5 exons
identity = 0.997
3'(1.000;0.989;1.000;0.995;1.000)5'
coverage = 1.000
EC number :
EC 1.15.1.1
InterPro :
IPR001189 : Manganese/iron superoxide dismutase
IPR019831 : Manganese/iron superoxide dismutase, N-terminal
IPR019832 : Manganese/iron superoxide dismutase, C-terminal
IPR019833 : Manganese/iron superoxide dismutase, binding site
GO :
0004784 : Molecular Function : superoxide dismutase activity
0006801 : Biological Process : superoxide metabolic process
0046872 : Molecular Function : metal ion binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006339)
HIX0006339
HIT000130489 (
ENST00000337404
)
(Superoxide dismutase [Mn], mitochondrial; EC=1.15.1.1;)
genome : 160,103,197 - 160,114,310 (11,114)
query : 1 - 991 (991/991)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.15.1.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006339)
HIX0006339
HIT000491433
(
AK296809
)
(Superoxide dismutase [Mn], mitochondrial; EC=1.15.1.1;)
genome : 160,103,197 - 160,114,273 (11,077)
query : 1 - 954 (954/954)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.15.1.1
InterPro :
IPR001189 : Manganese/iron superoxide dismutase
IPR019831 : Manganese/iron superoxide dismutase, N-terminal
IPR019832 : Manganese/iron superoxide dismutase, C-terminal
IPR019833 : Manganese/iron superoxide dismutase, binding site
GO :
0004784 : Molecular Function : superoxide dismutase activity
0006801 : Biological Process : superoxide metabolic process
0046872 : Molecular Function : metal ion binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006339)
HIX0006339
HIT000321487
(
X15132
)
(Superoxide dismutase [Mn], mitochondrial; EC=1.15.1.1; Precursor;)
genome : 160,103,311 - 160,114,259 (10,949)
query : 1 - 943 (943/989)
5 exons
identity = 0.998
3'(1.000;1.000;1.000;0.990;1.000)5'
coverage = 1.000
EC number :
EC 1.15.1.1
InterPro :
IPR001189 : Manganese/iron superoxide dismutase
IPR019831 : Manganese/iron superoxide dismutase, N-terminal
IPR019832 : Manganese/iron superoxide dismutase, C-terminal
IPR019833 : Manganese/iron superoxide dismutase, binding site
GO :
0004784 : Molecular Function : superoxide dismutase activity
0006801 : Biological Process : superoxide metabolic process
0046872 : Molecular Function : metal ion binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006339)
HIX0006339
HIT000322322
(
X59445
)
(Superoxide dismutase [Mn], mitochondrial; EC=1.15.1.1; Precursor;)
genome : 160,103,311 - 160,114,259 (10,949)
query : 1 - 943 (943/969)
5 exons
identity = 0.998
3'(1.000;1.000;1.000;0.990;1.000)5'
coverage = 1.000
EC number :
EC 1.15.1.1
InterPro :
IPR001189 : Manganese/iron superoxide dismutase
IPR019831 : Manganese/iron superoxide dismutase, N-terminal
IPR019832 : Manganese/iron superoxide dismutase, C-terminal
IPR019833 : Manganese/iron superoxide dismutase, binding site
GO :
0004784 : Molecular Function : superoxide dismutase activity
0006801 : Biological Process : superoxide metabolic process
0046872 : Molecular Function : metal ion binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006339)
HIX0006339
HIT000321416
(
X14322
)
(Superoxide dismutase [Mn], mitochondrial; EC=1.15.1.1; Precursor;)
genome : 160,103,312 - 160,114,295 (10,984)
query : 1 - 977 (977/977)
5 exons
identity = 0.993
3'(1.000;1.000;0.991;0.990;0.966)5'
coverage = 1.000
EC number :
EC 1.15.1.1
InterPro :
IPR001189 : Manganese/iron superoxide dismutase
IPR019831 : Manganese/iron superoxide dismutase, N-terminal
IPR019832 : Manganese/iron superoxide dismutase, C-terminal
IPR019833 : Manganese/iron superoxide dismutase, binding site
GO :
0004784 : Molecular Function : superoxide dismutase activity
0006801 : Biological Process : superoxide metabolic process
0046872 : Molecular Function : metal ion binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006339)
HIX0006339
HIT000195686
(
M36693
)
(Superoxide dismutase [Mn], mitochondrial; EC=1.15.1.1; Precursor;)
genome : 160,103,312 - 160,114,293 (10,982)
query : 1 - 976 (976/976)
5 exons
identity = 0.998
3'(1.000;1.000;0.991;0.995;1.000)5'
coverage = 1.000
EC number :
EC 1.15.1.1
InterPro :
IPR001189 : Manganese/iron superoxide dismutase
IPR019831 : Manganese/iron superoxide dismutase, N-terminal
IPR019832 : Manganese/iron superoxide dismutase, C-terminal
IPR019833 : Manganese/iron superoxide dismutase, binding site
GO :
0004784 : Molecular Function : superoxide dismutase activity
0006801 : Biological Process : superoxide metabolic process
0046872 : Molecular Function : metal ion binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006339)
HIX0006339
HIT000325335
(
Y00985
)
(Superoxide dismutase [Mn], mitochondrial; EC=1.15.1.1; Precursor;)
genome : 160,103,312 - 160,114,293 (10,982)
query : 1 - 976 (976/976)
5 exons
identity = 0.998
3'(1.000;1.000;0.991;0.995;1.000)5'
coverage = 1.000
EC number :
EC 1.15.1.1
InterPro :
IPR001189 : Manganese/iron superoxide dismutase
IPR019831 : Manganese/iron superoxide dismutase, N-terminal
IPR019832 : Manganese/iron superoxide dismutase, C-terminal
IPR019833 : Manganese/iron superoxide dismutase, binding site
GO :
0004784 : Molecular Function : superoxide dismutase activity
0006801 : Biological Process : superoxide metabolic process
0046872 : Molecular Function : metal ion binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006339)
HIX0006339
HIT000640618 (
ENST00000541573
)
(Superoxide dismutase [Mn], mitochondrial; EC=1.15.1.1;)
genome : 160,103,514 - 160,113,110 (9,597)
query : 1 - 573 (573/573)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.15.1.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 15.5, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006339)
HIX0006339
HIT000431948
(
AK313082
)
(Superoxide dismutase [Mn], mitochondrial; EC=1.15.1.1; Precursor;)
genome : 160,103,525 - 160,114,222 (10,698)
query : 4 - 695 (692/695)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.996
EC number :
EC 1.15.1.1
InterPro :
IPR001189 : Manganese/iron superoxide dismutase
IPR019831 : Manganese/iron superoxide dismutase, N-terminal
IPR019832 : Manganese/iron superoxide dismutase, C-terminal
IPR019833 : Manganese/iron superoxide dismutase, binding site
GO :
0004784 : Molecular Function : superoxide dismutase activity
0006801 : Biological Process : superoxide metabolic process
0046872 : Molecular Function : metal ion binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006339)
HIX0006339
HIT000099887
(
BT006967
)
(Superoxide dismutase [Mn], mitochondrial; EC=1.15.1.1; Precursor;)
genome : 160,103,526 - 160,114,199 (10,674)
query : 1 - 668 (668/669)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
EC number :
EC 1.15.1.1
InterPro :
IPR001189 : Manganese/iron superoxide dismutase
IPR019831 : Manganese/iron superoxide dismutase, N-terminal
IPR019832 : Manganese/iron superoxide dismutase, C-terminal
IPR019833 : Manganese/iron superoxide dismutase, binding site
GO :
0004784 : Molecular Function : superoxide dismutase activity
0006801 : Biological Process : superoxide metabolic process
0046872 : Molecular Function : metal ion binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006339)
HIX0006339
HIT000085719
(
AY280721
)
(Superoxide dismutase [Mn], mitochondrial; EC=1.15.1.1;)
genome : 160,103,542 - 160,113,903 (10,362)
query : 4 - 640 (637/640)
4 exons
identity = 0.994
3'(1.000;1.000;1.000;0.981)5'
coverage = 0.995
EC number :
EC 1.15.1.1
InterPro :
IPR001189 : Manganese/iron superoxide dismutase
IPR019831 : Manganese/iron superoxide dismutase, N-terminal
IPR019832 : Manganese/iron superoxide dismutase, C-terminal
IPR019833 : Manganese/iron superoxide dismutase, binding site
GO :
0004784 : Molecular Function : superoxide dismutase activity
0006801 : Biological Process : superoxide metabolic process
0046872 : Molecular Function : metal ion binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006339)
HIX0006339
HIT000085716
(
AY280718
)
(Superoxide dismutase [Mn], mitochondrial; EC=1.15.1.1;)
genome : 160,103,552 - 160,113,903 (10,352)
query : 13 - 639 (627/639)
4 exons
identity = 0.994
3'(1.000;1.000;1.000;0.981)5'
coverage = 0.981
EC number :
EC 1.15.1.1
InterPro :
IPR001189 : Manganese/iron superoxide dismutase
IPR019831 : Manganese/iron superoxide dismutase, N-terminal
IPR019832 : Manganese/iron superoxide dismutase, C-terminal
IPR019833 : Manganese/iron superoxide dismutase, binding site
GO :
0004784 : Molecular Function : superoxide dismutase activity
0006801 : Biological Process : superoxide metabolic process
0046872 : Molecular Function : metal ion binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, mito 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006339)
HIX0006339
HIT000085717
(
AY280719
)
(Superoxide dismutase [Mn], mitochondrial; EC=1.15.1.1;)
genome : 160,103,552 - 160,113,903 (10,352)
query : 5 - 631 (627/631)
4 exons
identity = 0.994
3'(1.000;1.000;1.000;0.981)5'
coverage = 0.994
EC number :
EC 1.15.1.1
InterPro :
IPR001189 : Manganese/iron superoxide dismutase
IPR019831 : Manganese/iron superoxide dismutase, N-terminal
IPR019832 : Manganese/iron superoxide dismutase, C-terminal
IPR019833 : Manganese/iron superoxide dismutase, binding site
GO :
0004784 : Molecular Function : superoxide dismutase activity
0006801 : Biological Process : superoxide metabolic process
0046872 : Molecular Function : metal ion binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006339)
HIX0006339
HIT000340905
(
DQ003134
)
(Superoxide dismutase [Mn], mitochondrial; EC=1.15.1.1;)
genome : 160,103,556 - 160,113,890 (10,335)
query : 24 - 635 (612/637)
4 exons
identity = 0.995
3'(0.991;1.000;1.000;0.990)5'
coverage = 0.961
EC number :
EC 1.15.1.1
InterPro :
IPR001189 : Manganese/iron superoxide dismutase
IPR019831 : Manganese/iron superoxide dismutase, N-terminal
IPR019832 : Manganese/iron superoxide dismutase, C-terminal
IPR019833 : Manganese/iron superoxide dismutase, binding site
GO :
0004784 : Molecular Function : superoxide dismutase activity
0006801 : Biological Process : superoxide metabolic process
0046872 : Molecular Function : metal ion binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto 13.5, cyto_nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006339)
HIX0006339
HIT000085718
(
AY280720
)
(Superoxide dismutase [Mn], mitochondrial isoform A precursor.)
genome : 160,103,555 - 160,113,903 (10,349)
query : 4 - 627 (624/627)
4 exons
identity = 0.994
3'(1.000;1.000;0.991;0.986)5'
coverage = 0.995
EC number :
EC 1.15.1.1
InterPro :
IPR001189 : Manganese/iron superoxide dismutase
IPR019831 : Manganese/iron superoxide dismutase, N-terminal
IPR019832 : Manganese/iron superoxide dismutase, C-terminal
IPR019833 : Manganese/iron superoxide dismutase, binding site
GO :
0004784 : Molecular Function : superoxide dismutase activity
0006801 : Biological Process : superoxide metabolic process
0046872 : Molecular Function : metal ion binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006339)
HIX0006339
HIT000639536 (
ENST00000540491
)
(Superoxide dismutase [Mn], mitochondrial; EC=1.15.1.1;)
genome : 160,103,642 - 160,113,682 (10,041)
query : 1 - 454 (454/454)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.15.1.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006339)
HIX0006339
HIT000644207 (
ENST00000545162
)
(Superoxide dismutase [Mn], mitochondrial; EC=1.15.1.1;)
genome : 160,105,907 - 160,148,389 (42,483)
query : 1 - 571 (571/571)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.15.1.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto 6, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006339)
HIX0006339
HIT000634606 (
ENST00000535561
)
(Superoxide dismutase [Mn], mitochondrial; EC=1.15.1.1;)
genome : 160,105,928 - 160,147,976 (42,049)
query : 1 - 551 (551/551)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.15.1.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, nucl 2, cyto 2, cyto_nucl 2, pero 2,
cyto_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006339)
HIX0006339
HIT000636702 (
ENST00000537657
)
(Superoxide dismutase [Mn], mitochondrial; EC=1.15.1.1;)
genome : 160,105,936 - 160,166,218 (60,283)
query : 1 - 507 (507/507)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.15.1.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 16, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006339)
HIX0006339
HIT000503932 (
ENST00000401980
)
(Superoxide dismutase [Mn], mitochondrial; EC=1.15.1.1;)
genome : 160,105,971 - 160,148,385 (42,415)
query : 1 - 523 (523/523)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.15.1.1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 14, nucl 9.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006339)
HIX0217152
HIT000312090 (
ENST00000358372
)
(Pre-mRNA-splicing regulator WTAP; Female-lethal(2)D homolog; hFL(2)D; WT1-associated protein; Wilms tumor 1-associating protein;)
genome : 160,146,617 - 160,177,351 (30,735)
query : 1 - 3,656 (3,656/3,656)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217152)
HIX0217152
HIT000201633 (
NM_004906
)
(Pre-mRNA-splicing regulator WTAP; Female-lethal(2)D homolog; hFL(2)D; WT1-associated protein; Wilms tumor 1-associating protein;)
genome : 160,148,030 - 160,177,350 (29,321)
query : 1 - 2,242 (2,242/2,265)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 17
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217152)
HIX0217152
HIT000078575
(
AF374416
)
Representative transcript
(Pre-mRNA-splicing regulator WTAP; Female-lethal(2)D homolog; hFL(2)D; WT1-associated protein; Wilms tumor 1-associating protein;)
genome : 160,148,152 - 160,177,350 (29,199)
query : 4 - 2,111 (2,108/2,134)
8 exons
identity = 0.993
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.988)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217152)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK156334
Danio
sp. (Zebrafish) : BC044427
Bos
sp. (Cow) : BC112754
Gallus
sp. (Chicken) : BX950648
Tetraodon
sp. (Tetraodon) : CR717936
Monodelphis
sp. (Opossum) : ENSMODT00000009313
Oryzias
sp. (Medaka) : ENSORLT00000016593
Pongo
sp. (Orangutan) : ENSPPYT00000019954
Takifugu
sp. (Fugu) : SINFRUT00000152840
Rattus
sp. (Rat) : XM_001068104
Macaca
sp. (Macaque) : XM_001096785
Pan
sp. (Chimpanzee) : XM_001150391
Equus
sp. (Horse) : XM_001500755
Canis
sp. (Dog) : XM_533464
HIX0217152
HIT000423651
(
AK290854
)
(Pre-mRNA-splicing regulator WTAP; Female-lethal(2)D homolog; hFL(2)D; WT1-associated protein; Wilms tumor 1-associating protein;)
genome : 160,148,149 - 160,176,792 (28,644)
query : 1 - 1,565 (1,565/1,565)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;0.983;1.000;0.994;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217152)
HIX0217152
HIT000263352
(
BC069192
)
(Pre-mRNA-splicing regulator WTAP; Female-lethal(2)D homolog; hFL(2)D; WT1-associated protein; Wilms tumor 1-associating protein;)
genome : 160,148,194 - 160,177,347 (29,154)
query : 1 - 2,076 (2,076/2,108)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217152)
HIX0217152
HIT000724762 (
NM_001270531
)
(Pre-mRNA-splicing regulator WTAP; Female-lethal(2)D homolog; hFL(2)D; WT1-associated protein; Wilms tumor 1-associating protein;)
genome : 160,148,532 - 160,177,350 (28,819)
query : 1 - 2,110 (2,110/2,133)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 17
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217152)
HIX0217152
HIT000246349
(
AJ276706
)
(Pre-mRNA-splicing regulator WTAP; Female-lethal(2)D homolog; hFL(2)D; WT1-associated protein; Wilms tumor 1-associating protein;)
genome : 160,160,020 - 160,176,627 (16,608)
query : 21 - 1,167 (1,147/1,167)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 0.983
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 11, plas 1, extr 1, mito 1, golg 1,
extr_plas 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217152)
HIX0217152
HIT000026548
(
AL583911
)
(Pre-mRNA-splicing regulator WTAP; Female-lethal(2)D homolog; hFL(2)D; WT1-associated protein; Wilms tumor 1-associating protein;)
genome : 160,169,281 - 160,176,822 (7,542)
query : 1 - 1,040 (1,040/1,040)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 9, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217152)
AL591025.8
159000001-159059789 F +
NCBI
AL589931.14
159059790-159273494 F +
NCBI
AL627422.12
159273495-159387360 F +
NCBI
AL035530.11
159387361-159493820 F -
NCBI
AL356417.17
159493821-159600147 F +
NCBI
AL355492.9
159600148-159652009 F +
NCBI
AL590551.8
159652010-159758769 F +
NCBI
AL357832.11
159758770-159906127 F +
NCBI
AL078604.10
159906128-160022715 F -
NCBI
AL589725.6
160022716-160051349 F +
NCBI
AL135914.25
160051350-160215151 F +
NCBI
AL139045.12
160215152-160304250 F +
NCBI
AL035691.17
160304251-160434118 F -
NCBI
AL353625.5
160434119-160580269 F +
NCBI
AL645733.1
160580270-160600000 F +
NCBI