bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0216943
HIT000695315 (
ENST00000583434
)
genome : 141,004,951 - 141,005,020 (70)
query : 1 - 70 (70/70)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216943)
HIX0216943
HIT000725738 (
NR_039675
)
genome : 141,004,951 - 141,005,020 (70)
query : 1 - 70 (70/70)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216943)
HIX0165466
HIT000506144 (
ENST00000407896
)
genome : 141,082,666 - 141,083,399 (734)
query : 1 - 734 (734/734)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0165466)
HIX0165857
HIT000552945 (
ENST00000455011
)
genome : 141,167,095 - 141,174,061 (6,967)
query : 1 - 453 (453/453)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0165857)
HIX0165436
HIT000505997 (
ENST00000407538
)
genome : 141,243,593 - 141,244,048 (456)
query : 1 - 456 (456/456)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0165436)
HIX0025247
HIT000056687
(
BX648040
)
genome : 141,768,148 - 141,772,143 (3,996)
query : 2 - 3,983 (3,982/3,995)
1 exon
identity = 0.991
5'(0.991)3'
coverage = 0.999
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025247)
HIX0217103
HIT000678481 (
ENST00000565399
)
genome : 141,768,148 - 141,772,143 (3,996)
query : 1 - 3,996 (3,996/3,996)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0217103)
HIX0165495
HIT000508811 (
ENST00000410832
)
genome : 141,807,278 - 141,807,549 (272)
query : 1 - 272 (272/272)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0165495)
HIX0165118
HIT000686913 (
ENST00000574601
)
genome : 141,956,787 - 141,957,472 (686)
query : 1 - 686 (686/686)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0165118)
HIX0165118
HIT000503853 (
ENST00000401762
)
genome : 141,956,857 - 141,957,640 (784)
query : 1 - 784 (784/784)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0165118)
HIX0032977
HIT000584655 (
ENST00000480652
)
genome : 142,379,467 - 142,397,059 (17,593)
query : 1 - 401 (401/401)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032977)
HIX0032977
HIT000107221 (
ENST00000258042
)
genome : 142,396,745 - 142,409,936 (13,192)
query : 1 - 1,354 (1,354/1,354)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032977)
HIX0032977
HIT000196267
(
M73482
)
genome : 142,396,745 - 142,409,936 (13,192)
query : 1 - 1,352 (1,352/1,352)
3 exons
identity = 0.998
3'(0.998;1.000;0.996)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032977)
HIX0032977
HIT000199404 (
NM_002511
)
genome : 142,396,745 - 142,409,936 (13,192)
query : 1 - 1,354 (1,354/1,354)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032977)
HIX0032977
HIT000335335
(
BC095542
)
genome : 142,396,785 - 142,409,795 (13,011)
query : 2 - 1,174 (1,173/1,174)
3 exons
identity = 0.997
3'(0.998;0.994;1.000)5'
coverage = 0.999
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032977)
HIX0032977
HIT000649049
(
GU727635
)
genome : 142,396,785 - 142,409,795 (13,011)
query : 1 - 1,173 (1,173/1,173)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0032977)
HIX0165848
HIT000552335 (
ENST00000454401
)
genome : 142,409,370 - 142,410,356 (987)
query : 1 - 222 (222/222)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0165848)
HIX0057869
HIT000548390 (
ENST00000450456
)
genome : 142,454,227 - 142,456,288 (2,062)
query : 1 - 916 (916/916)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057869)
HIX0006262
HIT000348910 (
ENST00000367630
)
genome : 142,468,367 - 142,542,085 (73,719)
query : 1 - 3,287 (3,287/3,287)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006262)
HIX0006262
HIT000348901 (
ENST00000367621
)
genome : 142,468,394 - 142,540,204 (71,811)
query : 1 - 1,284 (1,284/1,284)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006262)
HIX0006262
HIT000002005
(
AF151062
)
genome : 142,468,396 - 142,540,740 (72,345)
query : 1 - 1,905 (1,905/1,919)
8 exons
identity = 0.996
5'(1.000;1.000;1.000;0.987;0.954;1.000;1.000;
0.998)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006262)
HIX0006262
HIT000496000
(
AK301376
)
genome : 142,468,400 - 142,540,388 (71,989)
query : 5 - 1,385 (1,381/1,385)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.997)3'
coverage = 0.997
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006262)
HIX0006262
HIT000550907 (
ENST00000452973
)
genome : 142,468,398 - 142,540,388 (71,991)
query : 1 - 1,383 (1,383/1,383)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006262)
HIX0006262
HIT000039612
(
BC022536
)
genome : 142,468,400 - 142,541,909 (73,510)
query : 1 - 3,078 (3,078/3,093)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.999)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006262)
HIX0006262
HIT000032969
(
BC006989
)
genome : 142,468,400 - 142,540,737 (72,338)
query : 1 - 1,906 (1,906/1,936)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.999
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006262)
HIX0006262
HIT000247795
(
AJ420507
)
genome : 142,468,427 - 142,540,741 (72,315)
query : 24 - 1,906 (1,883/1,957)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.987
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006262)
HIX0006262
HIT000025280
(
AL136684
)
genome : 142,468,406 - 142,541,913 (73,508)
query : 1 - 3,076 (3,076/3,096)
8 exons
identity = 0.999
5'(0.992;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006262)
HIX0006262
HIT000050009
(
AK130738
)
genome : 142,468,407 - 142,540,739 (72,333)
query : 1 - 1,901 (1,901/1,901)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;0.987;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006262)
HIX0006262
HIT000064894
(
AF060225
)
genome : 142,468,410 - 142,541,000 (72,591)
query : 2 - 2,162 (2,161/2,162)
8 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.995)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006262)
HIX0006262
HIT000075794
(
AF271994
)
genome : 142,468,410 - 142,542,084 (73,675)
query : 1 - 3,243 (3,243/3,273)
8 exons
identity = 0.999
5'(1.000;1.000;0.992;1.000;1.000;0.994;1.000;
1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006262)
HIX0006262
HIT000206171 (
NM_016485
)
genome : 142,468,410 - 142,542,084 (73,675)
query : 1 - 3,243 (3,243/3,273)
8 exons
identity = 0.999
5'(1.000;1.000;0.992;1.000;1.000;0.994;1.000;
1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006262)
HIX0006262
HIT000002526
(
AK000051
)
genome : 142,468,410 - 142,540,740 (72,331)
query : 1 - 1,900 (1,900/1,916)
8 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.997)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006262)
HIX0006262
HIT000032536
(
BC005937
)
genome : 142,468,416 - 142,540,738 (72,323)
query : 3 - 1,803 (1,801/1,833)
9 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.997)3'
coverage = 0.998
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006262)
HIX0006262
HIT000071167
(
AF141341
)
genome : 142,468,423 - 142,539,663 (71,241)
query : 2 - 810 (809/810)
8 exons
identity = 0.989
5'(1.000;1.000;0.977;1.000;0.982;0.989;1.000;
0.931)3'
coverage = 0.999
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006262)
HIX0006262
HIT000268057
(
CR457207
)
genome : 142,468,425 - 142,539,776 (71,352)
query : 1 - 920 (920/924)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.996
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006262)
HIX0006262
HIT000083031
(
AY007093
)
genome : 142,487,423 - 142,540,730 (53,308)
query : 1 - 1,704 (1,704/1,713)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006262)
HIX0006262
HIT000595393 (
ENST00000491881
)
genome : 142,491,483 - 142,519,918 (28,436)
query : 1 - 528 (528/528)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006262)
HIX0006262
HIT000088050
(
BC013217
)
genome : 142,510,633 - 142,540,740 (30,108)
query : 1 - 1,403 (1,403/1,417)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0006262)
HIX0025133
HIT000045564
(
AK125691
)
genome : 142,517,277 - 142,519,047 (1,771)
query : 1 - 1,771 (1,771/1,771)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025133)
HIX0165631
HIT000524100 (
ENST00000426166
)
genome : 142,572,984 - 142,580,769 (7,786)
query : 1 - 349 (349/349)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0165631)
AL591400.8
141000001-141084840 F +
NCBI
AL035446.4
141084841-141185392 F +
NCBI
AL357084.12
141185393-141261334 F +
NCBI
AL357080.13
141261335-141433307 F +
NCBI
AL596186.5
141433308-141492738 F +
NCBI
AL603757.5
141492739-141601258 F +
NCBI
AL355596.21
141601259-141780036 F -
NCBI
AL590486.9
141780037-141856432 F +
NCBI
AL356794.10
141856433-142018871 F +
NCBI
AL590029.4
142018872-142024813 F +
NCBI
AL049823.14
142024814-142180322 F -
NCBI
AL512365.6
142180323-142180773 F +
NCBI
AL356127.8
142180774-142319759 F +
NCBI
AL589674.9
142319760-142430423 F +
NCBI
AL033522.1
142430424-142565384 F +
NCBI
AL360007.11
142565385-142600000 F +
NCBI