bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0024601
HIT000051835
(
BC036870
)
Representative transcript
(Sperm-tail PG-rich repeat-containing protein 2.)
genome : 98,480,027 - 99,064,391 (584,365)
query : 1 - 1,650 (1,650/1,750)
11 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR010736 : Sperm-tail PG-rich repeat
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024601)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK046955
Rattus
sp. (Rat) : BC128777
Bos
sp. (Cow) : ENSBTAT00000048227
Macaca
sp. (Macaque) : ENSMMUT00000018952
Monodelphis
sp. (Opossum) : ENSMODT00000039909
Pongo
sp. (Orangutan) : ENSPPYT00000017362
Tetraodon
sp. (Tetraodon) : GSTENT00029403001
Pan
sp. (Chimpanzee) : XM_001165076
Equus
sp. (Horse) : XM_001915706
Canis
sp. (Dog) : XM_544989
HIX0024601
HIT000317918 (
NM_174952
)
(Sperm-tail PG-rich repeat-containing protein 2.)
genome : 98,480,025 - 99,064,391 (584,367)
query : 1 - 1,654 (1,654/1,654)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 13
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024601)
HIX0024601
HIT000114113 (
ENST00000295268
)
(Sperm-tail PG-rich repeat-containing protein 2.)
genome : 98,480,027 - 99,064,391 (584,365)
query : 1 - 1,652 (1,652/1,652)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024601)
HIX0216024
HIT000310485 (
ENST00000356499
)
(Conserved hypothetical protein.)
genome : 99,172,839 - 99,182,781 (9,943)
query : 1 - 397 (397/397)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 4, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216024)
HIX0004387
HIT000208271 (
NM_021159
)
(Rap1 GTPase-GDP dissociation stimulator 1 isoform 1.)
genome : 99,182,527 - 99,365,011 (182,485)
query : 1 - 3,757 (3,757/3,767)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_mito 11.5, mito_pero 4.83333,
pero 4.5, plas 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004387)
HIX0004387
HIT000485522 (
NM_001100426
)
(Rap1 GTPase-GDP dissociation stimulator 1 isoform 2.)
genome : 99,182,527 - 99,365,011 (182,485)
query : 1 - 3,760 (3,760/3,770)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_mito 11.5, mito_pero 4.83333,
pero 4.5, plas 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004387)
HIX0004387
HIT000485523 (
NM_001100427
)
(Rap1 GTPase-GDP dissociation stimulator 1; Exchange factor smgGDS; SMG GDS protein; SMG P21 stimulatory GDP/GTP exchange protein;)
genome : 99,182,527 - 99,365,011 (182,485)
query : 1 - 3,757 (3,757/3,767)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 10.3333, cyto_mito 10.3333,
plas 4.5, mito_pero 4.33333, pero 3.5, extr_plas 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004387)
HIX0004387
HIT000485524 (
NM_001100428
)
(Rap1 GTPase-GDP dissociation stimulator 1 isoform 1.)
genome : 99,182,527 - 99,365,011 (182,485)
query : 1 - 3,613 (3,613/3,623)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_mito 11.5, pero 5.5,
mito_pero 5.33333, plas 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004387)
HIX0004387
HIT000485525 (
NM_001100429
)
(Rap1 GTPase-GDP dissociation stimulator 1 isoform 3.)
genome : 99,182,527 - 99,365,011 (182,485)
query : 1 - 3,610 (3,610/3,620)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_mito 11.3333, cyto_nucl 10.3333,
plas 4.5, mito_pero 4.33333, pero 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004387)
HIX0004387
HIT000485526 (
NM_001100430
)
(Rap1 GTPase-GDP dissociation stimulator 1 isoform 6.)
genome : 99,182,527 - 99,365,011 (182,485)
query : 1 - 3,484 (3,484/3,494)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_mito 12, mito_pero 4.83333, pero 4.5,
plas 1.5, extr_plas 1.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004387)
HIX0004387
HIT000608903 (
ENST00000509011
)
(Rap1 GTPase-GDP dissociation stimulator 1 isoform 3.)
genome : 99,182,535 - 99,313,231 (130,697)
query : 1 - 549 (549/549)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 10, cyto_nucl 9, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004387)
HIX0004387
HIT000603940 (
ENST00000503667
)
(Rap1 GTPase-GDP dissociation stimulator 1 isoform 6.)
genome : 99,182,547 - 99,273,718 (91,172)
query : 1 - 573 (573/573)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004387)
HIX0004387
HIT000361437 (
ENST00000380158
)
(Rap1 GTPase-GDP dissociation stimulator 1 isoform 4.)
genome : 99,182,568 - 99,363,524 (180,957)
query : 1 - 2,085 (2,085/2,085)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_mito 11.5, pero 5.5,
mito_pero 5.33333, plas 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004387)
HIX0004387
HIT000489780
(
AK295156
)
(Rap1 GTPase-GDP dissociation stimulator 1 isoform 3.)
genome : 99,182,568 - 99,363,524 (180,957)
query : 1 - 2,086 (2,086/2,086)
14 exons
identity = 0.998
5'(0.993;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.992;0.986;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR000225 : Armadillo
IPR011989 : Armadillo-like helical
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_mito 11.5, pero 5.5,
mito_pero 5.33333, plas 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004387)
HIX0004387
HIT000608418 (
ENST00000508490
)
(Rap1 GTPase-GDP dissociation stimulator 1 isoform 6.)
genome : 99,182,574 - 99,273,719 (91,146)
query : 1 - 544 (544/544)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004387)
HIX0004387
HIT000109355 (
ENST00000264572
)
(Rap1 GTPase-GDP dissociation stimulator 1 isoform 6.)
genome : 99,182,582 - 99,363,268 (180,687)
query : 1 - 1,686 (1,686/1,686)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_mito 12, mito_pero 4.83333, pero 4.5,
plas 1.5, extr_plas 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004387)
HIX0004387
HIT000605517 (
ENST00000505378
)
(Rap1 GTPase-GDP dissociation stimulator 1 isoform 2.)
genome : 99,182,585 - 99,313,396 (130,812)
query : 1 - 934 (934/934)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 16, nucl 10, extr 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004387)
HIX0004387
HIT000608156 (
ENST00000508213
)
(Rap1 GTPase-GDP dissociation stimulator 1 isoform 3.)
genome : 99,182,602 - 99,313,160 (130,559)
query : 1 - 558 (558/558)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, cyto 13, nucl 8, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004387)
HIX0004387
HIT000506967 (
ENST00000408927
)
(Rap1 GTPase-GDP dissociation stimulator 1; Exchange factor smgGDS; SMG GDS protein; SMG P21 stimulatory GDP/GTP exchange protein;)
genome : 99,182,604 - 99,365,012 (182,409)
query : 1 - 3,681 (3,681/3,681)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 10.3333, cyto_mito 10.3333,
plas 4.5, mito_pero 4.33333, pero 3.5, extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004387)
HIX0004387
HIT000011646
(
AK055032
)
Representative transcript
(Rap1 GTPase-GDP dissociation stimulator 1; Exchange factor smgGDS; SMG GDS protein; SMG P21 stimulatory GDP/GTP exchange protein;)
genome : 99,182,604 - 99,363,808 (181,205)
query : 1 - 2,477 (2,477/2,477)
15 exons
identity = 0.998
5'(1.000;1.000;0.992;1.000;1.000;1.000;1.000;
1.000;1.000;0.993;1.000;1.000;1.000;1.000;
0.997)3'
coverage = 1.000
InterPro :
IPR000225 : Armadillo
IPR011989 : Armadillo-like helical
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 10.3333, cyto_mito 10.3333,
plas 4.5, mito_pero 4.33333, pero 3.5, extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004387)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ719848
Mus
sp. (Mouse) : AK172052
Bos
sp. (Cow) : BC112707
Oryzias
sp. (Medaka) : ENSORLT00000015023
Pongo
sp. (Orangutan) : ENSPPYT00000017363
Takifugu
sp. (Fugu) : SINFRUT00000160518
Macaca
sp. (Macaque) : XM_001104606
Pan
sp. (Chimpanzee) : XM_001165560
Monodelphis
sp. (Opossum) : XM_001370150
Equus
sp. (Horse) : XM_001496467
Danio
sp. (Zebrafish) : XM_001921919
Rattus
sp. (Rat) : XM_227749
Canis
sp. (Dog) : XM_544990
HIX0004387
HIT000612477 (
ENST00000512857
)
(Rap1 GTPase-GDP dissociation stimulator 1 isoform 4.)
genome : 99,182,608 - 99,313,140 (130,533)
query : 1 - 583 (583/583)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, cyto 14, nucl 11, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004387)
HIX0004387
HIT000611101 (
ENST00000511379
)
(Rap1 GTPase-GDP dissociation stimulator 1 isoform 2.)
genome : 99,182,611 - 99,300,641 (118,031)
query : 1 - 941 (941/941)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 15.5, nucl 10.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004387)
HIX0004387
HIT000613640 (
ENST00000514122
)
(Rap1 GTPase-GDP dissociation stimulator 1 isoform 3.)
genome : 99,182,612 - 99,325,737 (143,126)
query : 1 - 579 (579/579)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 15, nucl 8.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004387)
HIX0004387
HIT000030668
(
BC001816
)
(Rap1 GTPase-GDP dissociation stimulator 1 isoform 2.)
genome : 99,182,620 - 99,363,816 (181,197)
query : 1 - 2,469 (2,469/2,487)
15 exons
identity = 1.000
5'(1.000;1.000;0.992;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR000225 : Armadillo
IPR011989 : Armadillo-like helical
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_mito 11.5, mito_pero 4.83333,
pero 4.5, plas 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004387)
HIX0004387
HIT000030695
(
BC001851
)
(Rap1 GTPase-GDP dissociation stimulator 1 isoform 2.)
genome : 99,182,620 - 99,363,816 (181,197)
query : 1 - 2,469 (2,469/2,487)
15 exons
identity = 1.000
5'(1.000;1.000;0.992;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR000225 : Armadillo
IPR011989 : Armadillo-like helical
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_mito 11.5, mito_pero 4.83333,
pero 4.5, plas 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004387)
HIX0004387
HIT000551646 (
ENST00000453712
)
(Rap1 GTPase-GDP dissociation stimulator 1 isoform 2.)
genome : 99,182,620 - 99,363,817 (181,198)
query : 1 - 2,470 (2,470/2,470)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_mito 11.5, mito_pero 4.83333,
pero 4.5, plas 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004387)
HIX0004387
HIT000614634 (
ENST00000515187
)
(Rap1 GTPase-GDP dissociation stimulator 1 isoform 6.)
genome : 99,182,630 - 99,273,739 (91,110)
query : 1 - 496 (496/496)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.5, cyto 11, extr 10, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004387)
HIX0004387
HIT000610941 (
ENST00000511212
)
(Rap1 GTPase-GDP dissociation stimulator 1 isoform 2.)
genome : 99,182,637 - 99,313,192 (130,556)
query : 1 - 555 (555/555)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 17.5, nucl 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004387)
HIX0004387
HIT000610622 (
ENST00000510870
)
(Rap1 GTPase-GDP dissociation stimulator 1 isoform 4.)
genome : 99,182,637 - 99,313,140 (130,504)
query : 1 - 537 (537/537)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, cyto 12.5, nucl 9.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004387)
HIX0004387
HIT000607301 (
ENST00000507303
)
(Rap1 GTPase-GDP dissociation stimulator 1 isoform 2.)
genome : 99,182,654 - 99,313,403 (130,750)
query : 1 - 875 (875/875)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, cyto 16.5, nucl 10.5, extr 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004387)
HIX0004387
HIT000131990 (
ENST00000339360
)
(Rap1 GTPase-GDP dissociation stimulator 1 isoform 2.)
genome : 99,182,669 - 99,363,485 (180,817)
query : 1 - 2,092 (2,092/2,092)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_mito 11.5, mito_pero 4.83333,
pero 4.5, plas 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004387)
HIX0004387
HIT000335846
(
BC098269
)
(Rap1 GTPase-GDP dissociation stimulator 1 isoform 1.)
genome : 99,182,669 - 99,363,485 (180,817)
query : 1 - 2,092 (2,092/2,092)
15 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.992;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.997)3'
coverage = 1.000
InterPro :
IPR000225 : Armadillo
IPR011989 : Armadillo-like helical
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_mito 11.5, mito_pero 4.83333,
pero 4.5, plas 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004387)
HIX0004387
HIT000335896
(
BC098334
)
(Rap1 GTPase-GDP dissociation stimulator 1 isoform 5.)
genome : 99,182,669 - 99,363,485 (180,817)
query : 1 - 1,942 (1,942/1,942)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000225 : Armadillo
IPR011989 : Armadillo-like helical
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_mito 11.3333, cyto_nucl 10.3333,
plas 4.5, mito_pero 4.33333, pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004387)
HIX0004387
HIT000336088
(
BC099708
)
(Rap1 GTPase-GDP dissociation stimulator 1 isoform 5.)
genome : 99,182,669 - 99,363,485 (180,817)
query : 1 - 1,942 (1,942/1,942)
14 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.992;1.000)3'
coverage = 1.000
InterPro :
IPR000225 : Armadillo
IPR011989 : Armadillo-like helical
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_mito 11.3333, cyto_nucl 10.3333,
plas 4.5, mito_pero 4.33333, pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004387)
HIX0004387
HIT000336125
(
BC099845
)
(Rap1 GTPase-GDP dissociation stimulator 1 isoform 4.)
genome : 99,182,669 - 99,363,485 (180,817)
query : 1 - 1,945 (1,945/1,945)
14 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.992;1.000)3'
coverage = 1.000
InterPro :
IPR000225 : Armadillo
IPR011989 : Armadillo-like helical
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_mito 11.5, pero 5.5,
mito_pero 5.33333, plas 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004387)
HIX0004387
HIT000506942 (
ENST00000408900
)
(Rap1 GTPase-GDP dissociation stimulator 1 isoform 5.)
genome : 99,182,669 - 99,363,485 (180,817)
query : 1 - 1,942 (1,942/1,942)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_mito 11.3333, cyto_nucl 10.3333,
plas 4.5, mito_pero 4.33333, pero 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004387)
HIX0004387
HIT000099757
(
BT006837
)
(Rap1 GTPase-GDP dissociation stimulator 1 isoform 1.)
genome : 99,214,555 - 99,363,266 (148,712)
query : 4 - 1,822 (1,819/1,824)
14 exons
identity = 0.999
5'(1.000;0.992;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.997
InterPro :
IPR000225 : Armadillo
IPR011989 : Armadillo-like helical
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_mito 11.5, mito_pero 4.83333,
pero 4.5, plas 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004387)
HIX0004387
HIT000253406
(
AY376900
)
(Rap1 GTPase-GDP dissociation stimulator 1 isoform 6.)
genome : 99,214,555 - 99,363,268 (148,714)
query : 4 - 1,551 (1,548/1,551)
12 exons
identity = 0.994
5'(0.982;0.992;1.000;0.992;1.000;0.992;1.000;
0.992;1.000;0.976;1.000;1.000)3'
coverage = 0.998
InterPro :
IPR000225 : Armadillo
IPR011989 : Armadillo-like helical
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 11.8333, cyto_mito 10.6667,
nucl 3.5, pero 3.5, mito_pero 2.83333, plas 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004387)
HIX0004387
HIT000074127
(
AF215923
)
(Rap1 GTPase-GDP dissociation stimulator 1; Exchange factor smgGDS; SMG GDS protein; SMG P21 stimulatory GDP/GTP exchange protein;)
genome : 99,214,558 - 99,363,268 (148,711)
query : 4 - 1,824 (1,821/1,824)
14 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;0.992;1.000;
1.000;1.000;0.992;1.000;1.000;1.000;0.984)3'
coverage = 0.998
InterPro :
IPR000225 : Armadillo
IPR011989 : Armadillo-like helical
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 10.3333, cyto_mito 10.3333,
plas 4.5, mito_pero 4.33333, pero 3.5, extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004387)
HIX0004387
HIT000074738
(
AF237413
)
(Rap1 GTPase-GDP dissociation stimulator 1; Exchange factor smgGDS; SMG GDS protein; SMG P21 stimulatory GDP/GTP exchange protein;)
genome : 99,214,558 - 99,363,268 (148,711)
query : 4 - 1,824 (1,821/1,824)
14 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.993;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.998
InterPro :
IPR000225 : Armadillo
IPR011989 : Armadillo-like helical
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 10.3333, cyto_mito 10.3333,
plas 4.5, mito_pero 4.33333, pero 3.5, extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004387)
HIX0004387
HIT000322594
(
X63465
)
(Rap1 GTPase-GDP dissociation stimulator 1 isoform 3.)
genome : 99,214,558 - 99,363,268 (148,711)
query : 4 - 1,677 (1,674/1,677)
13 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.992;1.000;1.000;
1.000;0.992;1.000;1.000;1.000;0.984)3'
coverage = 0.998
InterPro :
IPR000225 : Armadillo
IPR011989 : Armadillo-like helical
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_mito 11.3333, cyto_nucl 10.3333,
plas 4.5, mito_pero 4.33333, pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004387)
HIX0004387
HIT000695292_03 (
ENST00000583411
)
(Rap1 GTPase-GDP dissociation stimulator 1 isoform 6.)
genome : 99,214,558 - 99,214,666 (109)
query : 4 - 112 (109/112)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.973
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004387)
HIX0004387
HIT000492167
(
AK297543
)
(Rap1 GTPase-GDP dissociation stimulator 1 isoform 5.)
genome : 99,264,291 - 99,363,703 (99,413)
query : 1 - 1,999 (1,999/1,999)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000225 : Armadillo
IPR011989 : Armadillo-like helical
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, pero 10, cyto_pero 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004387)
HIX0004387
HIT000430109
(
AK311243
)
(Rap1 GTPase-GDP dissociation stimulator 1 isoform 5.)
genome : 99,264,304 - 99,358,171 (93,868)
query : 2 - 1,376 (1,375/1,376)
11 exons
identity = 0.999
5'(0.991;1.000;1.000;0.992;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR000225 : Armadillo
IPR011989 : Armadillo-like helical
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 8, cyto_plas 8, pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004387)
HIX0004387
HIT000604012 (
ENST00000503745
)
(Rap1 GTPase-GDP dissociation stimulator 1 isoform 3.)
genome : 99,273,664 - 99,313,231 (39,568)
query : 1 - 433 (433/433)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004387)
HIX0004387
HIT000609364 (
ENST00000509501
)
(Rap1 GTPase-GDP dissociation stimulator 1 isoform 3.)
genome : 99,300,253 - 99,342,434 (42,182)
query : 1 - 757 (757/757)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 9.5, cyto_nucl 8, mito_pero 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004387)
HIX0004387
HIT000613656 (
ENST00000514139
)
(Rap1 GTPase-GDP dissociation stimulator 1 isoform 2.)
genome : 99,313,102 - 99,317,812 (4,711)
query : 1 - 851 (851/851)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 7.5, cyto_nucl 6, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004387)
HIX0205331
HIT000589127 (
ENST00000485315
)
(Ribosomal protein L21e family protein.)
genome : 99,330,441 - 99,330,914 (474)
query : 1 - 474 (474/474)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto 8, extr 6, E.R._mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205331)
HIX0004389
HIT000202391 (
NM_005723
)
(Tetraspanin-5; Tspan-5; Tetraspan NET-4; Transmembrane 4 superfamily member 9;)
genome : 99,391,518 - 99,579,812 (188,295)
query : 1 - 3,397 (3,397/3,406)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004389)
HIX0004389
HIT000117136 (
ENST00000305798
)
(Tetraspanin-5; Tspan-5; Tetraspan NET-4; Transmembrane 4 superfamily member 9;)
genome : 99,391,518 - 99,579,780 (188,263)
query : 1 - 3,365 (3,365/3,365)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004389)
HIX0004389
HIT000608708 (
ENST00000508798
)
(Tetraspanin-5; Tspan-5; Tetraspan NET-4; Transmembrane 4 superfamily member 9;)
genome : 99,391,518 - 99,579,721 (188,204)
query : 1 - 3,242 (3,242/3,242)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, lyso 4, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004389)
HIX0004389
HIT000012273
(
AK055659
)
(Hypothetical short protein.)
genome : 99,391,519 - 99,393,376 (1,858)
query : 1 - 1,858 (1,858/1,858)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, cyto 6, E.R._mito 5.66667, mito 5,
mito_pero 4.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004389)
HIX0004389
HIT000605335 (
ENST00000505184
)
(Tetraspanin-5; Tspan-5; Tetraspan NET-4; Transmembrane 4 superfamily member 9;)
genome : 99,393,361 - 99,578,843 (185,483)
query : 1 - 1,191 (1,191/1,191)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004389)
HIX0004389
HIT000490009
(
AK295385
)
(Tetraspanin-5; Tspan-5; Tetraspan NET-4; Transmembrane 4 superfamily member 9;)
genome : 99,393,361 - 99,578,800 (185,440)
query : 1 - 1,148 (1,148/1,148)
8 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.980;
1.000)5'
coverage = 1.000
InterPro :
IPR000301 : Tetraspanin
IPR008952 : Tetraspanin, EC2 domain
IPR018499 : Tetraspanin/Peripherin
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004389)
HIX0004389
HIT000034518
(
BC009704
)
(Tetraspanin-5; Tspan-5; Tetraspan NET-4; Transmembrane 4 superfamily member 9;)
genome : 99,393,411 - 99,579,710 (186,300)
query : 1 - 1,402 (1,402/1,416)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000301 : Tetraspanin
IPR008952 : Tetraspanin, EC2 domain
IPR018499 : Tetraspanin/Peripherin
IPR018503 : Tetraspanin, conserved site
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004389)
HIX0004389
HIT000065521
(
AF065389
)
Representative transcript
(Tetraspanin-5; Tspan-5; Tetraspan NET-4; Transmembrane 4 superfamily member 9;)
genome : 99,393,421 - 99,579,724 (186,304)
query : 1 - 1,405 (1,405/1,405)
8 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000301 : Tetraspanin
IPR008952 : Tetraspanin, EC2 domain
IPR018499 : Tetraspanin/Peripherin
IPR018503 : Tetraspanin, conserved site
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004389)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB173982
Mus
sp. (Mouse) : AF121344
Rattus
sp. (Rat) : BC100135
Bos
sp. (Cow) : BC118327
Danio
sp. (Zebrafish) : ENSDART00000080053
Monodelphis
sp. (Opossum) : ENSMODT00000026378
Oryzias
sp. (Medaka) : ENSORLT00000014938
Pongo
sp. (Orangutan) : ENSPPYT00000017364
Tetraodon
sp. (Tetraodon) : GSTENT00020007001
Takifugu
sp. (Fugu) : SINFRUT00000159790
Pan
sp. (Chimpanzee) : XM_001165628
Equus
sp. (Horse) : XM_001914831
Gallus
sp. (Chicken) : XM_420654
Canis
sp. (Dog) : XM_535664
HIX0004389
HIT000046575
(
AK126702
)
(Tetraspanin-5; Tspan-5; Tetraspan NET-4; Transmembrane 4 superfamily member 9;)
genome : 99,393,496 - 99,406,683 (13,188)
query : 1 - 4,058 (4,058/4,058)
5 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;0.998)5'
coverage = 1.000
InterPro :
IPR008952 : Tetraspanin, EC2 domain
IPR018499 : Tetraspanin/Peripherin
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004389)
HIX0004389
HIT000611451 (
ENST00000511753
)
(Tetraspanin-5; Tspan-5; Tetraspan NET-4; Transmembrane 4 superfamily member 9;)
genome : 99,393,496 - 99,406,683 (13,188)
query : 1 - 4,062 (4,062/4,062)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004389)
HIX0004389
HIT000434589
(
AK315723
)
(Tetraspanin-5; Tspan-5; Tetraspan NET-4; Transmembrane 4 superfamily member 9;)
genome : 99,393,673 - 99,579,779 (186,107)
query : 1 - 1,209 (1,209/1,209)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000301 : Tetraspanin
IPR008952 : Tetraspanin, EC2 domain
IPR018499 : Tetraspanin/Peripherin
IPR018503 : Tetraspanin, conserved site
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004389)
HIX0004389
HIT000268680
(
CR541809
)
(Tetraspanin-5; Tspan-5; Tetraspan NET-4; Transmembrane 4 superfamily member 9;)
genome : 99,393,673 - 99,579,377 (185,705)
query : 1 - 807 (807/807)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000301 : Tetraspanin
IPR008952 : Tetraspanin, EC2 domain
IPR018499 : Tetraspanin/Peripherin
IPR018503 : Tetraspanin, conserved site
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004389)
HIX0004389
HIT000268700
(
CR541829
)
(Tetraspanin-5; Tspan-5; Tetraspan NET-4; Transmembrane 4 superfamily member 9;)
genome : 99,393,676 - 99,579,377 (185,702)
query : 1 - 804 (804/804)
8 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.993;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000301 : Tetraspanin
IPR008952 : Tetraspanin, EC2 domain
IPR018499 : Tetraspanin/Peripherin
IPR018503 : Tetraspanin, conserved site
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004389)
HIX0004389
HIT000614875 (
ENST00000515440
)
(Tetraspanin-5; Tspan-5; Tetraspan NET-4; Transmembrane 4 superfamily member 9;)
genome : 99,399,836 - 99,579,349 (179,514)
query : 1 - 605 (605/605)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004389)
HIX0004389
HIT000609049 (
ENST00000509168
)
(Tetraspanin-5; Tspan-5; Tetraspan NET-4; Transmembrane 4 superfamily member 9;)
genome : 99,399,851 - 99,481,384 (81,534)
query : 1 - 539 (539/539)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004389)
HIX0004389
HIT000614730 (
ENST00000515287
)
(Tetraspanin-5; Tspan-5; Tetraspan NET-4; Transmembrane 4 superfamily member 9;)
genome : 99,399,868 - 99,578,786 (178,919)
query : 1 - 574 (574/574)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, mito 3, E.R. 3, E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004389)
HIX0004389
HIT000611355 (
ENST00000511651
)
(Tetraspanin-5; Tspan-5; Tetraspan NET-4; Transmembrane 4 superfamily member 9;)
genome : 99,403,213 - 99,578,800 (175,588)
query : 1 - 710 (710/710)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, E.R._mito 6.83333, mito 6.5, E.R. 5,
mito_pero 4.16667, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004389)
HIX0004389
HIT000611496 (
ENST00000511800
)
(Tetraspanin-5; Tspan-5; Tetraspan NET-4; Transmembrane 4 superfamily member 9;)
genome : 99,403,252 - 99,578,798 (175,547)
query : 1 - 581 (581/581)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, plas 3, mito 3, pero 3, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004389)
HIX0004389
HIT000607174 (
ENST00000507167
)
(Tetraspanin-5; Tspan-5; Tetraspan NET-4; Transmembrane 4 superfamily member 9;)
genome : 99,407,696 - 99,579,445 (171,750)
query : 1 - 540 (540/540)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004389)
HIX0205526
HIT000605545 (
ENST00000505408
)
(Non-protein coding transcript.)
genome : 99,417,515 - 99,431,086 (13,572)
query : 1 - 489 (489/489)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205526)
HIX0024775
HIT000057658
(
BX649011
)
Representative transcript
(Conserved hypothetical protein.)
genome : 99,534,304 - 99,539,531 (5,228)
query : 1 - 5,227 (5,227/5,243)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, cyto 7.5, cyto_nucl 7.5, extr_plas 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024775)
HIX0024673
HIT000046582
(
AK126709
)
Representative transcript
(Conserved hypothetical protein.)
genome : 99,573,588 - 99,577,278 (3,691)
query : 1 - 3,691 (3,691/3,691)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024673)
HIX0024677
HIT000046904
(
AK127031
)
Representative transcript
(Hypothetical protein.)
genome : 99,580,055 - 99,585,702 (5,648)
query : 1 - 5,648 (5,648/5,648)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 10.5, cyto_nucl 8.66667, cyto_pero 7,
nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024677)
HIX0024677
HIT000682849 (
ENST00000569927
)
(Hypothetical protein.)
genome : 99,580,055 - 99,585,701 (5,647)
query : 1 - 5,647 (5,647/5,647)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 10.5, cyto_nucl 8.66667, cyto_pero 7,
nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024677)
HIX0205620
HIT000607211 (
ENST00000507207
)
(Conserved hypothetical protein.)
genome : 99,634,955 - 99,635,122 (168)
query : 1 - 168 (168/168)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 12, nucl 6, mito 5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205620)
HIX0205937
HIT000612814 (
ENST00000513224
)
(Nascent polypeptide-associated complex NAC domain containing protein.)
genome : 99,661,893 - 99,662,382 (490)
query : 1 - 490 (490/490)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto 9, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205937)
HIX0004392
HIT000548187 (
ENST00000450253
)
(Eukaryotic translation initiation factor 4E; eIF-4E; eIF4E; eIF-4F 25 kDa subunit; mRNA cap-binding protein;)
genome : 99,792,835 - 99,851,788 (58,954)
query : 1 - 11,523 (11,523/11,523)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 14, nucl 6, extr 2, mito 2, pero 2,
mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004392)
HIX0004391
HIT000023163
(
AK098333
)
Representative transcript
(Domain of unknown function DUF1725 domain containing protein.)
genome : 99,792,836 - 99,795,886 (3,051)
query : 1 - 3,051 (3,051/3,051)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
InterPro :
IPR013544 : Domain of unknown function DUF1725
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 11, cyto_nucl 8.5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004391)
HIX0004391
HIT000016369
(
AK091502
)
(Domain of unknown function DUF1725 domain containing protein.)
genome : 99,792,836 - 99,795,137 (2,302)
query : 1 - 2,301 (2,301/2,301)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
InterPro :
IPR013544 : Domain of unknown function DUF1725
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 11, cyto_nucl 8.5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004391)
HIX0004392
HIT000198897 (
NM_001968
)
(Eukaryotic translation initiation factor 4E; eIF-4E; eIF4E; eIF-4F 25 kDa subunit; mRNA cap-binding protein;)
genome : 99,799,607 - 99,851,786 (52,180)
query : 1 - 4,749 (4,749/4,749)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 14, nucl 6, extr 2, mito 2, pero 2,
mito_pero 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004392)
HIX0004392
HIT000559732 (
NM_001130679
)
(Eukaryotic translation initiation factor 4E isoform 1.)
genome : 99,799,607 - 99,851,786 (52,180)
query : 1 - 4,842 (4,842/4,842)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 14.5, nucl 7, extr 2, mito 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004392)
HIX0004392
HIT000559731 (
NM_001130678
)
(Eukaryotic translation initiation factor 4E isoform 3.)
genome : 99,799,607 - 99,850,243 (50,637)
query : 1 - 3,406 (3,406/3,406)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto 12, pero 3, extr 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004392)
HIX0004392
HIT000194390
(
M15353
)
(Eukaryotic translation initiation factor 4E; eIF-4E; eIF4E; eIF-4F 25 kDa subunit; mRNA cap-binding protein;)
genome : 99,801,019 - 99,850,281 (49,263)
query : 1 - 1,842 (1,842/1,842)
7 exons
identity = 0.992
3'(0.989;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001040 : Translation Initiation factor eIF- 4e
IPR019770 : Eukaryotic translation initiation factor 4E (eIF-4E), conserved site
IPR023398 : Translation Initiation factor eIF- 4e-like domain
GO :
0003723 : Molecular Function : RNA binding
0003743 : Molecular Function : translation initiation factor activity
0005737 : Cellular Component : cytoplasm
0006413 : Biological Process : translational initiation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 14, nucl 6, extr 2, mito 2, pero 2,
mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004392)
HIX0004392
HIT000035901
(
BC012611
)
(Eukaryotic translation initiation factor 4E; eIF-4E; eIF4E; eIF-4F 25 kDa subunit; mRNA cap-binding protein;)
genome : 99,801,528 - 99,850,276 (48,749)
query : 4 - 1,321 (1,318/1,352)
7 exons
identity = 0.998
3'(1.000;1.000;0.991;0.984;1.000;1.000;1.000)5'
coverage = 0.996
InterPro :
IPR001040 : Translation Initiation factor eIF- 4e
IPR019770 : Eukaryotic translation initiation factor 4E (eIF-4E), conserved site
IPR023398 : Translation Initiation factor eIF- 4e-like domain
GO :
0003723 : Molecular Function : RNA binding
0003743 : Molecular Function : translation initiation factor activity
0005737 : Cellular Component : cytoplasm
0006413 : Biological Process : translational initiation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 14, nucl 6, extr 2, mito 2, pero 2,
mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004392)
HIX0004392
HIT000338845
(
BC107715
)
(Eukaryotic translation initiation factor 4E; eIF-4E; eIF4E; eIF-4F 25 kDa subunit; mRNA cap-binding protein;)
genome : 99,801,528 - 99,850,276 (48,749)
query : 5 - 1,322 (1,318/1,350)
7 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.991;1.000)5'
coverage = 0.995
InterPro :
IPR001040 : Translation Initiation factor eIF- 4e
IPR019770 : Eukaryotic translation initiation factor 4E (eIF-4E), conserved site
IPR023398 : Translation Initiation factor eIF- 4e-like domain
GO :
0003723 : Molecular Function : RNA binding
0003743 : Molecular Function : translation initiation factor activity
0005737 : Cellular Component : cytoplasm
0006413 : Biological Process : translational initiation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, nucl 6, extr 2, mito 2, pero 2, mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004392)
HIX0004392
HIT000249440_03
(
AJ844638
)
(Non-protein coding transcript.)
genome : 99,801,516 - 99,801,594 (79)
query : 1 - 79 (79/79)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004392)
HIX0004392
HIT000481421_02 (
ENST00000398202
)
(Eukaryotic translation initiation factor 4E; eIF-4E; eIF4E; eIF-4F 25 kDa subunit; mRNA cap-binding protein;)
genome : 99,801,528 - 99,850,276 (48,749)
query : 2 - 1,329 (1,328/1,329)
7 exons
identity = 0.986
3'(0.982;1.000;1.000;1.000;0.979;0.991;0.968)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14, nucl 7, extr 2, mito 2, pero 2,
mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004392)
HIX0004392
HIT000112010 (
ENST00000280892
)
(Eukaryotic translation initiation factor 4E isoform 3.)
genome : 99,801,916 - 99,850,243 (48,328)
query : 1 - 1,097 (1,097/1,097)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto 12, pero 3, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004392)
HIX0004392
HIT000495606
(
AK300982
)
(Eukaryotic translation initiation factor 4E isoform 3.)
genome : 99,801,916 - 99,850,243 (48,328)
query : 1 - 1,096 (1,096/1,096)
7 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001040 : Translation Initiation factor eIF- 4e
IPR019770 : Eukaryotic translation initiation factor 4E (eIF-4E), conserved site
IPR023398 : Translation Initiation factor eIF- 4e-like domain
GO :
0003723 : Molecular Function : RNA binding
0003743 : Molecular Function : translation initiation factor activity
0005737 : Cellular Component : cytoplasm
0006413 : Biological Process : translational initiation
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto 12, pero 3, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004392)
HIX0004392
HIT000615053_01 (
ENST00000515638
)
(Eukaryotic translation initiation factor 4E; eIF-4E; eIF4E; eIF-4F 25 kDa subunit; mRNA cap-binding protein;)
genome : 99,801,923 - 99,850,276 (48,354)
query : 1 - 738 (738/738)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto 12, cyto_nucl 9.5, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004392)
HIX0004392
HIT000604649 (
ENST00000504432
)
(Eukaryotic translation initiation factor 4E isoform 2.)
genome : 99,801,996 - 99,850,276 (48,281)
query : 1 - 1,132 (1,132/1,132)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 13.5, nucl 6, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004392)
HIX0004392
HIT000611348_01 (
ENST00000511644
)
(Eukaryotic translation initiation factor 4E isoform 2.)
genome : 99,801,996 - 99,823,134 (21,139)
query : 7 - 686 (680/686)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.991
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004392)
HIX0004392
HIT000051340
(
BC035166
)
Representative transcript
(Eukaryotic translation initiation factor 4E; eIF-4E; eIF4E; eIF-4F 25 kDa subunit; mRNA cap-binding protein;)
genome : 99,802,027 - 99,851,788 (49,762)
query : 6 - 2,337 (2,332/2,353)
7 exons
identity = 0.999
3'(1.000;1.000;0.991;1.000;1.000;1.000;0.999)5'
coverage = 0.997
InterPro :
IPR001040 : Translation Initiation factor eIF- 4e
IPR019770 : Eukaryotic translation initiation factor 4E (eIF-4E), conserved site
IPR023398 : Translation Initiation factor eIF- 4e-like domain
GO :
0003723 : Molecular Function : RNA binding
0003743 : Molecular Function : translation initiation factor activity
0005737 : Cellular Component : cytoplasm
0006413 : Biological Process : translational initiation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 14, nucl 6, extr 2, mito 2, pero 2,
mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004392)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB170765
Mus
sp. (Mouse) : AK082867
Danio
sp. (Zebrafish) : BC085374
Rattus
sp. (Rat) : BC087001
Bos
sp. (Cow) : BC111272
Danio
sp. (Zebrafish) : BC155151
Gallus
sp. (Chicken) : BX932594
Tetraodon
sp. (Tetraodon) : CR725540
Pongo
sp. (Orangutan) : ENSPPYT00000017365
Takifugu
sp. (Fugu) : SINFRUT00000149241
Takifugu
sp. (Fugu) : SINFRUT00000155515
Monodelphis
sp. (Opossum) : XM_001364246
Equus
sp. (Horse) : XM_001496564
Canis
sp. (Dog) : XM_544992
Pan
sp. (Chimpanzee) : XR_024927
HIX0004392
HIT000097548
(
BC043226
)
(Eukaryotic translation initiation factor 4E; eIF-4E; eIF4E; eIF-4F 25 kDa subunit; mRNA cap-binding protein;)
genome : 99,802,028 - 99,851,118 (49,091)
query : 6 - 1,667 (1,662/1,683)
7 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.997)5'
coverage = 0.996
InterPro :
IPR001040 : Translation Initiation factor eIF- 4e
IPR019770 : Eukaryotic translation initiation factor 4E (eIF-4E), conserved site
IPR023398 : Translation Initiation factor eIF- 4e-like domain
GO :
0003723 : Molecular Function : RNA binding
0003743 : Molecular Function : translation initiation factor activity
0005737 : Cellular Component : cytoplasm
0006413 : Biological Process : translational initiation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 14, nucl 6, extr 2, mito 2, pero 2,
mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004392)
HIX0004392
HIT000606084 (
ENST00000505992
)
(Eukaryotic translation initiation factor 4E isoform 1.)
genome : 99,802,049 - 99,850,284 (48,236)
query : 1 - 898 (898/898)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 14.5, nucl 7, extr 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004392)
HIX0004392
HIT000605344 (
ENST00000505194
)
(Eukaryotic translation initiation factor 4E isoform 2.)
genome : 99,802,161 - 99,812,049 (9,889)
query : 1 - 563 (563/563)
5 exons
identity = 0.984
3'(1.000;1.000;1.000;1.000;0.926)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 2, cyto 2, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004392)
HIX0004392
HIT000627410_01 (
ENST00000528228
)
(Eukaryotic translation initiation factor 4E isoform 2.)
genome : 99,802,181 - 99,823,134 (20,954)
query : 2 - 640 (639/640)
6 exons
identity = 0.951
3'(0.965;0.929;0.965;1.000;0.929;0.944)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 12.5, cyto_nucl 8.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004392)
HIX0004392
HIT000489707
(
AK295083
)
(Eukaryotic translation initiation factor 4E isoform 1.)
genome : 99,807,502 - 99,850,279 (42,778)
query : 1 - 1,143 (1,143/1,143)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001040 : Translation Initiation factor eIF- 4e
IPR019770 : Eukaryotic translation initiation factor 4E (eIF-4E), conserved site
IPR023398 : Translation Initiation factor eIF- 4e-like domain
GO :
0003723 : Molecular Function : RNA binding
0003743 : Molecular Function : translation initiation factor activity
0005737 : Cellular Component : cytoplasm
0006413 : Biological Process : translational initiation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, extr 10, cyto_nucl 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004392)
HIX0004392
HIT000607646 (
ENST00000507665
)
(Eukaryotic translation initiation factor 4E isoform 2.)
genome : 99,807,502 - 99,850,279 (42,778)
query : 1 - 1,143 (1,143/1,143)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, extr 10, cyto_nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004392)
HIX0004392
HIT000605935 (
ENST00000505829
)
(Eukaryotic translation initiation factor 4E-1B; eIF4E; eIF4E-1B;)
genome : 99,808,314 - 99,812,722 (4,409)
query : 1 - 429 (429/429)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, mito 12, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004392)
HIX0004392
HIT000604686 (
ENST00000504472
)
(Eukaryotic translation initiation factor 4E isoform 1.)
genome : 99,816,273 - 99,850,284 (34,012)
query : 1 - 588 (588/588)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004392)
HIX0004392
HIT000612126 (
ENST00000512475
)
(Tubulin-specific chaperone A; TCP1-chaperonin cofactor A; Tubulin-folding cofactor A; CFA;)
genome : 99,830,688 - 99,830,999 (312)
query : 1 - 312 (312/312)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004392)
HIX0004392
HIT000516319 (
ENST00000418385
)
(PDZ and LIM domain protein 5 isoform i.)
genome : 99,847,123 - 99,850,276 (3,154)
query : 1 - 574 (574/574)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 13.5, cyto 8.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004392)
HIX0216115
HIT000695534 (
ENST00000583654
)
(Non-protein coding transcript.)
genome : 99,850,048 - 99,916,145 (66,098)
query : 1 - 622 (622/622)
5 exons
identity = 0.998
5'(1.000;1.000;1.000;0.990;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216115)
HIX0004392
HIT000557240 (
ENST00000459306
)
(Non-protein coding transcript.)
genome : 99,851,074 - 99,851,138 (65)
query : 1 - 65 (65/65)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004392)
HIX0205434
HIT000603874 (
ENST00000503598
)
(FAM177 family protein.)
genome : 99,877,133 - 99,877,918 (786)
query : 1 - 473 (473/473)
2 exons
identity = 0.992
5'(0.989;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205434)
HIX0160258
HIT000510917 (
ENST00000412983
)
(Conserved hypothetical protein.)
genome : 99,897,951 - 99,898,268 (318)
query : 1 - 318 (318/318)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, extr 4, cyto 3, mito 3, cyto_mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0160258)
HIX0004393
HIT000114479 (
ENST00000296411
)
(Methionine aminopeptidase 1; MAP 1; MetAP 1; EC=3.4.11.18; Peptidase M 1;)
genome : 99,916,771 - 99,983,964 (67,194)
query : 1 - 2,791 (2,791/2,791)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.11.18
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cysk 8, cyto_mito 8, cyto_pero 8,
cyto_plas 8, cyto_golg 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004393)
HIX0004393
HIT000205320 (
NM_015143
)
(Methionine aminopeptidase 1; MAP 1; MetAP 1; EC=3.4.11.18; Peptidase M 1;)
genome : 99,916,788 - 99,983,960 (67,173)
query : 1 - 2,770 (2,770/2,835)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.11.18
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cysk 8, cyto_mito 8, cyto_pero 8,
cyto_plas 8, cyto_golg 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004393)
HIX0004393
HIT000610021 (
ENST00000510209
)
(Methionine aminopeptidase 1.)
genome : 99,916,810 - 99,960,597 (43,788)
query : 1 - 559 (559/559)
6 exons
identity = 0.993
5'(1.000;1.000;1.000;1.000;0.962;0.973)3'
coverage = 1.000
EC number :
EC 3.4.11.18
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004393)
HIX0004393
HIT000498863
(
AK304239
)
(Methionine aminopeptidase 1; MAP 1; MetAP 1; EC=3.4.11.18; Peptidase M 1;)
genome : 99,916,872 - 99,982,723 (65,852)
query : 1 - 1,449 (1,449/1,449)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.11.18
InterPro :
IPR000994 : Peptidase M24, structural domain
IPR001714 : Peptidase M24, methionine aminopeptidase
IPR002467 : Peptidase M24A, methionine aminopeptidase, subfamily 1
GO :
0004177 : Molecular Function : aminopeptidase activity
0006508 : Biological Process : proteolysis
0008235 : Molecular Function : metalloexopeptidase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cysk 8, cyto_mito 8, cyto_pero 8,
cyto_plas 8, cyto_golg 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004393)
HIX0004393
HIT000607525 (
ENST00000507537
)
(Methionine aminopeptidase 1.)
genome : 99,916,872 - 99,964,470 (47,599)
query : 1 - 718 (718/718)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 3.4.11.18
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, mito 7, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004393)
HIX0004393
HIT000042248
(
D42084
)
Representative transcript
(Methionine aminopeptidase 1; MAP 1; MetAP 1; EC=3.4.11.18; Peptidase M 1;)
genome : 99,916,880 - 99,983,953 (67,074)
query : 1 - 2,671 (2,671/2,671)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.11.18
InterPro :
IPR000994 : Peptidase M24, structural domain
IPR001714 : Peptidase M24, methionine aminopeptidase
IPR002467 : Peptidase M24A, methionine aminopeptidase, subfamily 1
GO :
0004177 : Molecular Function : aminopeptidase activity
0006508 : Biological Process : proteolysis
0008235 : Molecular Function : metalloexopeptidase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cysk 8, cyto_mito 8, cyto_pero 8,
cyto_plas 8, cyto_golg 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004393)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ720759
Mus
sp. (Mouse) : AK153944
Danio
sp. (Zebrafish) : BC076042
Bos
sp. (Cow) : BC147894
Tetraodon
sp. (Tetraodon) : CR694735
Pongo
sp. (Orangutan) : CR858696
Oryzias
sp. (Medaka) : ENSORLT00000022075
Rattus
sp. (Rat) : ENSRNOT00000017579
Takifugu
sp. (Fugu) : SINFRUT00000183577
Macaca
sp. (Macaque) : XM_001099172
Pan
sp. (Chimpanzee) : XM_001165770
Monodelphis
sp. (Opossum) : XM_001364086
Equus
sp. (Horse) : XM_001496615
Canis
sp. (Dog) : XM_544993
HIX0004393
HIT000606313 (
ENST00000506238
)
(Methionine aminopeptidase 1.)
genome : 99,916,891 - 99,960,598 (43,708)
query : 1 - 553 (553/553)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.11.18
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13, mito 8, nucl 5.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004393)
HIX0004393
HIT000603550 (
ENST00000503247
)
(Methionine aminopeptidase 1.)
genome : 99,916,917 - 99,962,277 (45,361)
query : 1 - 653 (653/653)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 3.4.11.18
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 4, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004393)
HIX0004393
HIT000609930 (
ENST00000510107
)
(Methionine aminopeptidase 1.)
genome : 99,916,981 - 99,962,277 (45,297)
query : 1 - 770 (770/770)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 3.4.11.18
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004393)
HIX0024763
HIT000056524
(
BX647877
)
Representative transcript
(Conserved hypothetical protein.)
genome : 99,918,011 - 99,926,436 (8,426)
query : 1 - 4,032 (4,032/4,061)
4 exons
identity = 0.994
5'(0.996;0.998;0.993;0.990)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024763)
HIX0024763
HIT000659814 (
NR_037455
)
(Non-protein coding transcript.)
genome : 99,918,538 - 99,918,611 (74)
query : 1 - 74 (74/74)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024763)
HIX0024763
HIT000691703 (
ENST00000579779
)
(Non-protein coding transcript.)
genome : 99,918,538 - 99,918,611 (74)
query : 1 - 74 (74/74)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024763)
HIX0004393
HIT000612790 (
ENST00000513199
)
(Methionine aminopeptidase 1.)
genome : 99,943,446 - 99,964,422 (20,977)
query : 1 - 613 (613/613)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 3.4.11.18
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 7.5, cyto_nucl 5, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004393)
HIX0205838
HIT000610801 (
ENST00000511060
)
(Conserved hypothetical protein.)
genome : 99,943,462 - 99,944,282 (821)
query : 1 - 821 (821/821)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21.5, cyto_mito 14, cyto 5.5, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205838)
HIX0004393
HIT000340853
(
CR936632
)
(Methionine aminopeptidase 1.)
genome : 99,943,921 - 99,982,503 (38,583)
query : 1 - 4,891 (4,891/5,007)
13 exons
identity = 0.999
5'(0.995;0.999;1.000;1.000;1.000;1.000;0.989;
1.000;1.000;0.992;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.11.18
InterPro :
IPR000994 : Peptidase M24, structural domain
IPR001714 : Peptidase M24, methionine aminopeptidase
IPR002467 : Peptidase M24A, methionine aminopeptidase, subfamily 1
GO :
0004177 : Molecular Function : aminopeptidase activity
0006508 : Biological Process : proteolysis
0008235 : Molecular Function : metalloexopeptidase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, nucl 6, extr 3, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004393)
HIX0004393
HIT000606610 (
ENST00000506548
)
(Methionine aminopeptidase 1.)
genome : 99,943,923 - 99,956,611 (12,689)
query : 1 - 714 (714/714)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.11.18
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004393)
HIX0004393
HIT000643076 (
ENST00000544031
)
(Methionine aminopeptidase 1.)
genome : 99,955,381 - 99,983,959 (28,579)
query : 17 - 2,502 (2,486/2,502)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.994
EC number :
EC 3.4.11.18
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 6, extr 3, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004393)
HIX0004393
HIT000612695 (
ENST00000513097
)
(Methionine aminopeptidase 1.)
genome : 99,960,354 - 99,966,429 (6,076)
query : 1 - 586 (586/586)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.11.18
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 11.8333, extr 11, cyto_pero 8,
nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004393)
HIX0004393
HIT000040942
(
BC030054
)
(Methionine aminopeptidase 1.)
genome : 99,960,516 - 99,983,960 (23,445)
query : 5 - 2,328 (2,324/2,393)
7 exons
identity = 0.999
5'(0.971;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.998
EC number :
EC 3.4.11.18
InterPro :
IPR000994 : Peptidase M24, structural domain
IPR001714 : Peptidase M24, methionine aminopeptidase
IPR002467 : Peptidase M24A, methionine aminopeptidase, subfamily 1
GO :
0004177 : Molecular Function : aminopeptidase activity
0006508 : Biological Process : proteolysis
0008235 : Molecular Function : metalloexopeptidase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 12, cyto_nucl 8.5, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004393)
HIX0004393
HIT000609952 (
ENST00000510133
)
(Methionine aminopeptidase 1.)
genome : 99,964,400 - 99,982,670 (18,271)
query : 1 - 715 (715/715)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.11.18
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 12, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004393)
HIX0004393
HIT000428331
(
AK309465
)
(Methionine aminopeptidase 1.)
genome : 99,966,341 - 99,983,175 (16,835)
query : 1 - 1,058 (1,058/1,058)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 3.4.11.18
InterPro :
IPR000994 : Peptidase M24, structural domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 5.5, cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004393)
HIX0004393
HIT000613576 (
ENST00000514051
)
(Methionine aminopeptidase 1.)
genome : 99,966,341 - 99,983,175 (16,835)
query : 1 - 1,058 (1,058/1,058)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.11.18
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 5.5, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004393)
HIX0004394
HIT000197693 (
NM_000671
)
(Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase family protein.)
genome : 99,992,129 - 100,009,931 (17,803)
query : 1 - 2,644 (2,644/2,644)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
,
EC 1.1.1.284
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00680 : Methane metabolism (75)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, plas 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004394)
HIX0004394
HIT000114480_01 (
ENST00000296412
)
(Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase family protein.)
genome : 99,992,132 - 100,009,902 (17,771)
query : 1 - 2,612 (2,612/2,612)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004394)
HIX0004394
HIT000385307
(
AK226177
)
(Alcohol dehydrogenase class-3; EC=1.1.1.1; Alcohol dehydrogenase 5; Alcohol dehydrogenase class chi chain; Alcohol dehydrogenase class-III; Glutathione-dependent formaldehyde dehydrogenase; FALDH; FDH; GSH-FDH; EC=1.1.1.-; S-(hydroxymethyl)glutathione dehydrogenase; EC=1.1.1.284;)
genome : 99,992,132 - 100,006,369 (14,238)
query : 150 - 2,700 (2,551/2,700)
8 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.945
EC number :
EC 1.1.1.1
,
EC 1.1.1.284
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00680 : Methane metabolism (75)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR014183 : Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase
IPR016040 : NAD(P)-binding domain
GO :
0006069 : Biological Process : ethanol oxidation
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0051903 : Molecular Function : S-(hydroxymethyl)glutathione dehydrogenase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 29, mito 1.5, E.R._mito 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004394)
HIX0004394
HIT000195363
(
M30471
)
(Alcohol dehydrogenase class-3; EC=1.1.1.1; Alcohol dehydrogenase 5; Alcohol dehydrogenase class chi chain; Alcohol dehydrogenase class-III; Glutathione-dependent formaldehyde dehydrogenase; FALDH; FDH; GSH-FDH; EC=1.1.1.-; S-(hydroxymethyl)glutathione dehydrogenase; EC=1.1.1.284;)
genome : 99,992,419 - 100,006,369 (13,951)
query : 13 - 2,277 (2,265/2,277)
8 exons
identity = 0.993
3'(0.987;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.995
EC number :
EC 1.1.1.1
,
EC 1.1.1.284
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00680 : Methane metabolism (75)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR014183 : Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase
IPR016040 : NAD(P)-binding domain
GO :
0006069 : Biological Process : ethanol oxidation
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0051903 : Molecular Function : S-(hydroxymethyl)glutathione dehydrogenase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004394)
HIX0004394
HIT000195338
(
M29872
)
(Alcohol dehydrogenase class-3; EC=1.1.1.1; Alcohol dehydrogenase 5; Alcohol dehydrogenase class chi chain; Alcohol dehydrogenase class-III; Glutathione-dependent formaldehyde dehydrogenase; FALDH; FDH; GSH-FDH; EC=1.1.1.-; S-(hydroxymethyl)glutathione dehydrogenase; EC=1.1.1.284;)
genome : 99,993,132 - 100,009,902 (16,771)
query : 9 - 1,610 (1,602/1,613)
9 exons
identity = 0.993
3'(0.980;1.000;1.000;0.996;0.995;1.000;1.000;
1.000;0.984)5'
coverage = 0.993
EC number :
EC 1.1.1.1
,
EC 1.1.1.284
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00680 : Methane metabolism (75)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR014183 : Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase
IPR016040 : NAD(P)-binding domain
GO :
0006069 : Biological Process : ethanol oxidation
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0051903 : Molecular Function : S-(hydroxymethyl)glutathione dehydrogenase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, mito_pero 3, mito 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004394)
HIX0004394
HIT000036844
(
BC014665
)
(Alcohol dehydrogenase class-3; EC=1.1.1.1; Alcohol dehydrogenase 5; Alcohol dehydrogenase class chi chain; Alcohol dehydrogenase class-III; Glutathione-dependent formaldehyde dehydrogenase; FALDH; FDH; GSH-FDH; EC=1.1.1.-; S-(hydroxymethyl)glutathione dehydrogenase; EC=1.1.1.284;)
genome : 99,993,311 - 100,006,369 (13,059)
query : 13 - 1,384 (1,372/1,418)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.991
EC number :
EC 1.1.1.1
,
EC 1.1.1.284
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00680 : Methane metabolism (75)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR014183 : Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase
IPR016040 : NAD(P)-binding domain
GO :
0006069 : Biological Process : ethanol oxidation
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0051903 : Molecular Function : S-(hydroxymethyl)glutathione dehydrogenase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004394)
HIX0004394
HIT000612260 (
ENST00000512621
)
(Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase family protein.)
genome : 99,993,337 - 100,006,367 (13,031)
query : 1 - 1,475 (1,475/1,475)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_mito 10.3333, plas 9, mito 4,
E.R._mito 3.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004394)
HIX0004394
HIT000264364
(
BC070491
)
(Alcohol dehydrogenase class-3; EC=1.1.1.1; Alcohol dehydrogenase 5; Alcohol dehydrogenase class chi chain; Alcohol dehydrogenase class-III; Glutathione-dependent formaldehyde dehydrogenase; FALDH; FDH; GSH-FDH; EC=1.1.1.-; S-(hydroxymethyl)glutathione dehydrogenase; EC=1.1.1.284;)
genome : 99,993,564 - 100,009,873 (16,310)
query : 1 - 1,151 (1,151/1,165)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
,
EC 1.1.1.284
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00680 : Methane metabolism (75)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR014183 : Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase
IPR016040 : NAD(P)-binding domain
GO :
0006069 : Biological Process : ethanol oxidation
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0051903 : Molecular Function : S-(hydroxymethyl)glutathione dehydrogenase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004394)
HIX0004394
HIT000044867
(
AK124994
)
(Alcohol dehydrogenase superfamily, zinc-type protein.)
genome : 99,993,566 - 99,995,805 (2,240)
query : 1 - 2,244 (2,244/2,244)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR011032 : GroES (chaperonin 10)-like
GO :
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11, nucl 8.5, extr 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004394)
HIX0004394
HIT000431233
(
AK312367
)
Representative transcript
(Alcohol dehydrogenase class-3; EC=1.1.1.1; Alcohol dehydrogenase 5; Alcohol dehydrogenase class chi chain; Alcohol dehydrogenase class-III; Glutathione-dependent formaldehyde dehydrogenase; FALDH; FDH; GSH-FDH; EC=1.1.1.-; S-(hydroxymethyl)glutathione dehydrogenase; EC=1.1.1.284;)
genome : 99,993,568 - 100,009,881 (16,314)
query : 1 - 1,155 (1,155/1,155)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
,
EC 1.1.1.284
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00680 : Methane metabolism (75)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR014183 : Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase
IPR016040 : NAD(P)-binding domain
GO :
0006069 : Biological Process : ethanol oxidation
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0051903 : Molecular Function : S-(hydroxymethyl)glutathione dehydrogenase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004394)
HIX0004394
HIT000266681
(
BT019832
)
(Alcohol dehydrogenase class-3; EC=1.1.1.1; Alcohol dehydrogenase 5; Alcohol dehydrogenase class chi chain; Alcohol dehydrogenase class-III; Glutathione-dependent formaldehyde dehydrogenase; FALDH; FDH; GSH-FDH; EC=1.1.1.-; S-(hydroxymethyl)glutathione dehydrogenase; EC=1.1.1.284;)
genome : 99,993,569 - 100,006,369 (12,801)
query : 11 - 1,124 (1,114/1,125)
8 exons
identity = 0.999
3'(1.000;0.993;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.990
EC number :
EC 1.1.1.1
,
EC 1.1.1.284
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00680 : Methane metabolism (75)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR014183 : Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase
IPR016040 : NAD(P)-binding domain
GO :
0006069 : Biological Process : ethanol oxidation
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0051903 : Molecular Function : S-(hydroxymethyl)glutathione dehydrogenase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004394)
HIX0004394
HIT000266682
(
BT019833
)
(Alcohol dehydrogenase class-3; EC=1.1.1.1; Alcohol dehydrogenase 5; Alcohol dehydrogenase class chi chain; Alcohol dehydrogenase class-III; Glutathione-dependent formaldehyde dehydrogenase; FALDH; FDH; GSH-FDH; EC=1.1.1.-; S-(hydroxymethyl)glutathione dehydrogenase; EC=1.1.1.284;)
genome : 99,993,569 - 100,006,369 (12,801)
query : 11 - 1,124 (1,114/1,125)
8 exons
identity = 0.999
3'(1.000;1.000;1.000;0.996;1.000;1.000;1.000;
1.000)5'
coverage = 0.990
EC number :
EC 1.1.1.1
,
EC 1.1.1.284
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00680 : Methane metabolism (75)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR014183 : Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase
IPR016040 : NAD(P)-binding domain
GO :
0006069 : Biological Process : ethanol oxidation
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0051903 : Molecular Function : S-(hydroxymethyl)glutathione dehydrogenase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004394)
HIX0004394
HIT000268429
(
CR536491
)
(Alcohol dehydrogenase class-3; EC=1.1.1.1; Alcohol dehydrogenase 5; Alcohol dehydrogenase class chi chain; Alcohol dehydrogenase class-III; Glutathione-dependent formaldehyde dehydrogenase; FALDH; FDH; GSH-FDH; EC=1.1.1.-; S-(hydroxymethyl)glutathione dehydrogenase; EC=1.1.1.284;)
genome : 99,993,568 - 100,006,369 (12,802)
query : 11 - 1,125 (1,115/1,125)
8 exons
identity = 0.999
3'(1.000;1.000;1.000;0.996;1.000;1.000;1.000;
1.000)5'
coverage = 0.991
EC number :
EC 1.1.1.1
,
EC 1.1.1.284
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00680 : Methane metabolism (75)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR014183 : Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase
IPR016040 : NAD(P)-binding domain
GO :
0006069 : Biological Process : ethanol oxidation
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0051903 : Molecular Function : S-(hydroxymethyl)glutathione dehydrogenase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004394)
HIX0004394
HIT000511993_02 (
ENST00000414059
)
(GroES (chaperonin 10)-like domain containing protein.)
genome : 99,993,568 - 99,997,482 (3,915)
query : 1 - 340 (340/340)
4 exons
identity = 0.968
3'(1.000;0.986;0.934;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 9.5, extr 6, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004394)
HIX0004394
HIT000268562
(
CR541689
)
(Alcohol dehydrogenase class-3; EC=1.1.1.1; Alcohol dehydrogenase 5; Alcohol dehydrogenase class chi chain; Alcohol dehydrogenase class-III; Glutathione-dependent formaldehyde dehydrogenase; FALDH; FDH; GSH-FDH; EC=1.1.1.-; S-(hydroxymethyl)glutathione dehydrogenase; EC=1.1.1.284;)
genome : 99,993,571 - 100,006,369 (12,799)
query : 11 - 1,122 (1,112/1,122)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.991
EC number :
EC 1.1.1.1
,
EC 1.1.1.284
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00680 : Methane metabolism (75)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR014183 : Alcohol dehydrogenase class III/S-(hydroxymethyl)glutathione dehydrogenase
IPR016040 : NAD(P)-binding domain
GO :
0006069 : Biological Process : ethanol oxidation
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0051903 : Molecular Function : S-(hydroxymethyl)glutathione dehydrogenase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004394)
HIX0004394
HIT000612297_01 (
ENST00000512659
)
(Alcohol dehydrogenase GroES-like domain containing protein.)
genome : 99,996,064 - 100,006,369 (10,306)
query : 13 - 822 (810/822)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.985
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, plas 10, cyto_mito 8.83333, mito 3,
E.R._mito 2.83333, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004394)
HIX0004394
HIT000048841
(
AK129570
)
(Alcohol dehydrogenase class-3; EC=1.1.1.1; Alcohol dehydrogenase 5; Alcohol dehydrogenase class chi chain; Alcohol dehydrogenase class-III; Glutathione-dependent formaldehyde dehydrogenase; FALDH; FDH; GSH-FDH; EC=1.1.1.-; S-(hydroxymethyl)glutathione dehydrogenase; EC=1.1.1.284;)
genome : 99,996,376 - 100,009,868 (13,493)
query : 1 - 1,909 (1,909/1,909)
6 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
,
EC 1.1.1.284
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00680 : Methane metabolism (75)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
GO :
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004394)
HIX0004394
HIT000608437 (
ENST00000508511
)
(Alcohol dehydrogenase superfamily, zinc-type protein.)
genome : 99,996,390 - 100,009,868 (13,479)
query : 1 - 1,895 (1,895/1,909)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004394)
HIX0004394
HIT000603439 (
ENST00000503130
)
(Alcohol dehydrogenase superfamily, zinc-type protein.)
genome : 99,997,443 - 100,006,367 (8,925)
query : 1 - 786 (786/786)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, plas 11, cyto_mito 8.33333, mito 3,
E.R._mito 2.83333, E.R. 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004394)
HIX0004394
HIT000602929_01 (
ENST00000502590
)
(Alcohol dehydrogenase, C-terminal domain containing protein.)
genome : 99,997,543 - 100,006,369 (8,827)
query : 15 - 697 (683/697)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.980
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, plas 9, mito 7, cyto_nucl 7, cyto_pero 7,
cyto_golg 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004394)
HIX0004394
HIT000612595 (
ENST00000512991
)
(Alcohol dehydrogenase GroES-like domain containing protein.)
genome : 99,997,586 - 100,006,774 (9,189)
query : 1 - 880 (880/880)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004394)
HIX0004394
HIT000612245 (
ENST00000512604
)
(Conserved hypothetical protein.)
genome : 99,997,948 - 100,001,174 (3,227)
query : 1 - 331 (331/331)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 15.5, nucl 5.5, mito 5, extr 3,
mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004394)
HIX0004394
HIT000605767 (
ENST00000505652
)
(Alcohol dehydrogenase superfamily, zinc-type protein.)
genome : 99,998,004 - 100,009,887 (11,884)
query : 1 - 623 (623/623)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 14, cyto_nucl 7.83333,
extr_plas 7.83333, cyto_plas 7.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004394)
HIX0004394
HIT000608095 (
ENST00000508146
)
(Alcohol dehydrogenase superfamily, zinc-type protein.)
genome : 100,001,600 - 100,009,952 (8,353)
query : 1 - 722 (722/722)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 14, cyto_nucl 7.83333,
extr_plas 7.83333, cyto_plas 7.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004394)
HIX0004394
HIT000607117 (
ENST00000507102
)
(Alcohol dehydrogenase GroES-like domain containing protein.)
genome : 100,002,825 - 100,009,864 (7,040)
query : 1 - 570 (570/570)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 10.3333, extr 10,
cyto_plas 9.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004394)
HIX0004394
HIT000602744 (
ENST00000502386
)
(Alcohol dehydrogenase GroES-like domain containing protein.)
genome : 100,003,070 - 100,009,864 (6,795)
query : 1 - 545 (545/545)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 10, cyto_nucl 6.83333,
cyto_plas 5.83333, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004394)
HIX0024765
HIT000056634
(
BX647987
)
(Conserved hypothetical protein.)
genome : 100,010,008 - 100,222,513 (212,506)
query : 2 - 4,825 (4,824/4,844)
9 exons
identity = 0.994
5'(0.998;0.992;0.995;1.000;1.000;0.976;0.888;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 11, extr 5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024765)
HIX0024765
HIT000660043 (
NR_037884
)
(Alcohol dehydrogenase 1A; EC=1.1.1.1; Alcohol dehydrogenase subunit alpha;)
genome : 100,010,008 - 100,222,513 (212,506)
query : 1 - 4,825 (4,825/4,827)
9 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;0.976;0.900;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, extr 6, nucl 4, mito 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024765)
HIX0024765
HIT000602305 (
ENST00000500358
)
(Alcohol dehydrogenase 1A; EC=1.1.1.1; Alcohol dehydrogenase subunit alpha;)
genome : 100,010,008 - 100,222,513 (212,506)
query : 1 - 4,825 (4,825/4,825)
9 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;0.976;0.900;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, extr 6, nucl 4, mito 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024765)
HIX0024765
HIT000067366
(
AF086487
)
(Hypothetical short protein.)
genome : 100,010,109 - 100,023,944 (13,836)
query : 10 - 665 (656/672)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.989
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, extr 9, mito_nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024765)
HIX0024765
HIT000602112 (
ENST00000499178
)
(Hypothetical short protein.)
genome : 100,010,102 - 100,023,944 (13,843)
query : 1 - 663 (663/663)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, extr 9, mito_nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024765)
HIX0164063
HIT000466274_07
(
DQ599743
)
Representative transcript
(Non-protein coding transcript.)
genome : 100,026,140 - 100,026,171 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164063)
HIX0200651
HIT000490180
(
AK295556
)
(Alcohol dehydrogenase 4; EC=1.1.1.1; Alcohol dehydrogenase class II pi chain;)
genome : 100,044,808 - 100,065,448 (20,641)
query : 1 - 2,151 (2,151/2,151)
10 exons
identity = 0.996
3'(0.993;1.000;0.993;0.996;1.000;1.000;0.993;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
IPR028632 : Alcohol dehydrogenase family, zinc-type, class-II subfamily
GO :
0004024 : Molecular Function : alcohol dehydrogenase activity, zinc-dependent
0006069 : Biological Process : ethanol oxidation
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0035276 : Molecular Function : ethanol binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13, mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200651)
HIX0200651
HIT000608323 (
ENST00000508393
)
(Alcohol dehydrogenase 4; EC=1.1.1.1; Alcohol dehydrogenase class II pi chain;)
genome : 100,044,808 - 100,065,448 (20,641)
query : 1 - 2,151 (2,151/2,151)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200651)
HIX0200651
HIT000194427
(
M15943
)
(Alcohol dehydrogenase 4; EC=1.1.1.1; Alcohol dehydrogenase class II pi chain;)
genome : 100,044,818 - 100,065,432 (20,615)
query : 3 - 1,980 (1,978/1,981)
9 exons
identity = 0.997
3'(0.998;0.993;1.000;1.000;1.000;1.000;0.986;
1.000;1.000)5'
coverage = 0.998
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
IPR028632 : Alcohol dehydrogenase family, zinc-type, class-II subfamily
GO :
0004024 : Molecular Function : alcohol dehydrogenase activity, zinc-dependent
0006069 : Biological Process : ethanol oxidation
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0035276 : Molecular Function : ethanol binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200651)
HIX0200651
HIT000109740 (
ENST00000265512
)
(Alcohol dehydrogenase 4; EC=1.1.1.1; Alcohol dehydrogenase class II pi chain;)
genome : 100,044,818 - 100,065,448 (20,631)
query : 1 - 1,993 (1,993/1,993)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200651)
HIX0200651
HIT000197692 (
NM_000670
)
(Alcohol dehydrogenase 4; EC=1.1.1.1; Alcohol dehydrogenase class II pi chain;)
genome : 100,044,832 - 100,065,449 (20,618)
query : 1 - 1,980 (1,980/1,980)
9 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.993;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200651)
HIX0200651
HIT000521379 (
ENST00000423445
)
(Alcohol dehydrogenase 4; EC=1.1.1.1; Alcohol dehydrogenase class II pi chain;)
genome : 100,044,832 - 100,064,391 (19,560)
query : 1 - 1,961 (1,961/1,961)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200651)
HIX0200651
HIT000039467
(
BC022319
)
(Alcohol dehydrogenase 4; EC=1.1.1.1; Alcohol dehydrogenase class II pi chain;)
genome : 100,045,283 - 100,065,448 (20,166)
query : 1 - 1,528 (1,528/1,557)
9 exons
identity = 0.996
3'(0.991;1.000;0.993;0.996;1.000;1.000;0.993;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
IPR028632 : Alcohol dehydrogenase family, zinc-type, class-II subfamily
GO :
0004024 : Molecular Function : alcohol dehydrogenase activity, zinc-dependent
0006069 : Biological Process : ethanol oxidation
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0035276 : Molecular Function : ethanol binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200651)
HIX0200651
HIT000423632
(
AK290835
)
Representative transcript
(Alcohol dehydrogenase 4; EC=1.1.1.1; Alcohol dehydrogenase class II pi chain;)
genome : 100,045,512 - 100,065,448 (19,937)
query : 1 - 1,299 (1,299/1,299)
9 exons
identity = 0.998
3'(1.000;0.993;1.000;0.996;1.000;1.000;0.993;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
IPR028632 : Alcohol dehydrogenase family, zinc-type, class-II subfamily
GO :
0004024 : Molecular Function : alcohol dehydrogenase activity, zinc-dependent
0006069 : Biological Process : ethanol oxidation
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0035276 : Molecular Function : ethanol binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200651)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ720203
Mus
sp. (Mouse) : AK132994
Rattus
sp. (Rat) : AY310136
Oryzias
sp. (Medaka) : AY682722
Danio
sp. (Zebrafish) : BC071367
Bos
sp. (Cow) : BC149290
Tetraodon
sp. (Tetraodon) : CR654140
Tetraodon
sp. (Tetraodon) : CR721062
Pongo
sp. (Orangutan) : ENSPPYT00000017368
Takifugu
sp. (Fugu) : SINFRUT00000155506
Macaca
sp. (Macaque) : XM_001106068
Equus
sp. (Horse) : XM_001496708
Pan
sp. (Chimpanzee) : XM_517357
Canis
sp. (Dog) : XM_535665
Monodelphis
sp. (Opossum) : XR_030319
HIX0200651
HIT000609336 (
ENST00000509471
)
(Alcohol dehydrogenase 4; EC=1.1.1.1; Alcohol dehydrogenase class II pi chain;)
genome : 100,045,515 - 100,057,688 (12,174)
query : 1 - 575 (575/575)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, extr 8, E.R._mito 7.16667, mito 4.5,
E.R. 4.5, mito_pero 4.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200651)
HIX0200651
HIT000605709 (
ENST00000505590
)
(Alcohol dehydrogenase 4; EC=1.1.1.1; Alcohol dehydrogenase class II pi chain;)
genome : 100,045,530 - 100,065,427 (19,898)
query : 1 - 1,400 (1,400/1,400)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200651)
HIX0200651
HIT000432515
(
AK313649
)
(Alcohol dehydrogenase 4; EC=1.1.1.1; Alcohol dehydrogenase class II pi chain;)
genome : 100,045,557 - 100,065,448 (19,892)
query : 1 - 1,254 (1,254/1,254)
9 exons
identity = 0.996
3'(0.984;1.000;0.993;0.992;1.000;1.000;0.993;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
IPR028632 : Alcohol dehydrogenase family, zinc-type, class-II subfamily
GO :
0004024 : Molecular Function : alcohol dehydrogenase activity, zinc-dependent
0006069 : Biological Process : ethanol oxidation
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0035276 : Molecular Function : ethanol binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200651)
HIX0200651
HIT000606758 (
ENST00000506705
)
(Alcohol dehydrogenase 4; EC=1.1.1.1; Alcohol dehydrogenase class II pi chain;)
genome : 100,047,745 - 100,065,427 (17,683)
query : 1 - 1,340 (1,340/1,340)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_mito 13, mito 10.5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200651)
HIX0200651
HIT000612147 (
ENST00000512499
)
(Alcohol dehydrogenase 4; EC=1.1.1.1; Alcohol dehydrogenase class II pi chain;)
genome : 100,052,782 - 100,065,389 (12,608)
query : 1 - 946 (946/946)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 12, nucl 4.5, mito 4.5,
mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200651)
HIX0200651
HIT000603706 (
ENST00000503416
)
(Alcohol dehydrogenase 4; EC=1.1.1.1; Alcohol dehydrogenase class II pi chain;)
genome : 100,052,803 - 100,063,962 (11,160)
query : 1 - 708 (708/708)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 7, cyto_nucl 7, pero 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200651)
HIX0200651
HIT000604369 (
ENST00000504125
)
(Alcohol dehydrogenase 4; EC=1.1.1.1; Alcohol dehydrogenase class II pi chain;)
genome : 100,052,825 - 100,065,419 (12,595)
query : 1 - 665 (665/665)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200651)
HIX0200651
HIT000604203 (
ENST00000503944
)
(Alcohol dehydrogenase 4; EC=1.1.1.1; Alcohol dehydrogenase class II pi chain;)
genome : 100,057,688 - 100,064,357 (6,670)
query : 1 - 304 (304/304)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, cyto_nucl 10.5, extr 8, nucl 8, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200651)
HIX0200651
HIT000605061 (
ENST00000504894
)
(Alcohol dehydrogenase 4; EC=1.1.1.1; Alcohol dehydrogenase class II pi chain;)
genome : 100,062,690 - 100,065,448 (2,759)
query : 1 - 485 (485/489)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.992
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 10, nucl 4, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200651)
HIX0200651
HIT000604784 (
ENST00000504581
)
(Alcohol dehydrogenase 4; EC=1.1.1.1; Alcohol dehydrogenase class II pi chain;)
genome : 100,062,790 - 100,078,949 (16,160)
query : 1 - 315 (315/315)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, extr 10, mito 5, extr_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200651)
HIX0205155
HIT000707094 (
ENST00000595299
)
(Proliferating cell nuclear antigen, PCNA, C-terminal domain containing protein.)
genome : 100,081,671 - 100,082,422 (752)
query : 1 - 752 (752/752)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205155)
HIX0205155
HIT000657745 (
NR_028270
)
(Proliferating cell nuclear antigen, PCNA family protein.)
genome : 100,081,750 - 100,082,804 (1,055)
query : 1 - 1,055 (1,055/1,055)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 4.5, cyto_nucl 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205155)
HIX0205155
HIT000605502 (
ENST00000505363
)
(Proliferating cell nuclear antigen, PCNA family protein.)
genome : 100,082,094 - 100,082,802 (709)
query : 1 - 709 (709/709)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205155)
HIX0024765
HIT000606239 (
ENST00000506160
)
(Conserved hypothetical protein.)
genome : 100,082,941 - 100,202,398 (119,458)
query : 1 - 524 (524/524)
5 exons
identity = 0.987
5'(0.976;0.981;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 9.5, cyto_nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024765)
HIX0215930
HIT000246475
(
AJ278908
)
(Alcohol dehydrogenase family, zinc-type, class-V subfamily protein.)
genome : 100,123,797 - 100,126,212 (2,416)
query : 1 - 1,734 (1,734/1,734)
2 exons
identity = 0.997
3'(0.996;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR011032 : GroES (chaperonin 10)-like
IPR028633 : Alcohol dehydrogenase family, zinc-type, class-V subfamily
GO :
0004024 : Molecular Function : alcohol dehydrogenase activity, zinc-dependent
0006069 : Biological Process : ethanol oxidation
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0035276 : Molecular Function : ethanol binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 11.5, cyto 9.5, cyto_plas 7.66667,
nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215930)
HIX0215930
HIT000492914
(
AK298290
)
Representative transcript
(Alcohol dehydrogenase family, zinc-type, class-V subfamily protein.)
genome : 100,124,985 - 100,131,455 (6,471)
query : 14 - 1,182 (1,169/1,182)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.989
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR016040 : NAD(P)-binding domain
IPR028633 : Alcohol dehydrogenase family, zinc-type, class-V subfamily
GO :
0004024 : Molecular Function : alcohol dehydrogenase activity, zinc-dependent
0006069 : Biological Process : ethanol oxidation
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0035276 : Molecular Function : ethanol binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 25, cyto 3, mito 3, cyto_mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215930)
HIX0215930
HIT000612339 (
ENST00000512708
)
(Alcohol dehydrogenase superfamily, zinc-type protein.)
genome : 100,125,176 - 100,129,971 (4,796)
query : 1 - 511 (511/511)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 9, mito 8, cyto_nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215930)
HIX0024765
HIT000606518 (
ENST00000506454
)
(Hypothetical short protein.)
genome : 100,125,490 - 100,184,733 (59,244)
query : 75 - 749 (675/749)
5 exons
identity = 0.987
5'(0.905;1.000;1.000;1.000;1.000)3'
coverage = 0.901
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 20, nucl 15.5, cyto 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024765)
HIX0215930
HIT000604494 (
ENST00000504257
)
(Alcohol dehydrogenase, C-terminal domain containing protein.)
genome : 100,129,565 - 100,131,448 (1,884)
query : 1 - 731 (731/731)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, plas 9.5, extr_plas 6.5, mito 5, mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215930)
HIX0216090
HIT000612847 (
ENST00000513262
)
(GroES (chaperonin 10)-like domain containing protein.)
genome : 100,136,952 - 100,140,403 (3,452)
query : 1 - 580 (580/580)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 11.5, cyto_nucl 7.5, mito 6,
extr_plas 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216090)
HIX0024765
HIT000095244
(
BC038532
)
Representative transcript
(Conserved hypothetical protein.)
genome : 100,175,086 - 100,196,208 (21,123)
query : 1 - 915 (915/939)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.992;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 4, lyso 3, cyto_mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024765)
HIX0024765
HIT000609167 (
ENST00000509295
)
(Conserved hypothetical protein.)
genome : 100,175,086 - 100,196,208 (21,123)
query : 1 - 915 (915/915)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, mito 4, extr 2, cyto 2, E.R._mito 2,
mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024765)
HIX0024765
HIT000610520 (
ENST00000510764
)
(Conserved hypothetical protein.)
genome : 100,188,828 - 100,196,208 (7,381)
query : 1 - 387 (387/387)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024765)
HIX0031477
HIT000197689 (
NM_000667
)
(Alcohol dehydrogenase 1A; EC=1.1.1.1; Alcohol dehydrogenase subunit alpha;)
genome : 100,197,523 - 100,212,185 (14,663)
query : 1 - 1,500 (1,500/1,513)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.999
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, nucl 3, pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031477)
HIX0031477
HIT000102831 (
ENST00000209668
)
(Alcohol dehydrogenase 1A; EC=1.1.1.1; Alcohol dehydrogenase subunit alpha;)
genome : 100,197,524 - 100,212,185 (14,662)
query : 1 - 1,499 (1,499/1,499)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, nucl 3, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031477)
HIX0031477
HIT000423355
(
AK290558
)
Representative transcript
(Alcohol dehydrogenase 1A; EC=1.1.1.1; Alcohol dehydrogenase subunit alpha;)
genome : 100,197,524 - 100,212,142 (14,619)
query : 1 - 1,456 (1,456/1,456)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
GO :
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, nucl 3, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031477)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AF508795
Macaca
sp. (Macaque) : AK240628
Oryzias
sp. (Medaka) : AY512892
Mus
sp. (Mouse) : BC013477
Danio
sp. (Zebrafish) : BC065900
Bos
sp. (Cow) : BC111290
Tetraodon
sp. (Tetraodon) : CR654140
Pongo
sp. (Orangutan) : CR858591
Equus
sp. (Horse) : M64864
Takifugu
sp. (Fugu) : SINFRUT00000155510
Pan
sp. (Chimpanzee) : XM_001166683
Canis
sp. (Dog) : XM_535667
Monodelphis
sp. (Opossum) : XR_030319
HIX0031477
HIT000194151
(
M12271
)
(Alcohol dehydrogenase 1A; EC=1.1.1.1; Alcohol dehydrogenase subunit alpha;)
genome : 100,197,524 - 100,212,086 (14,563)
query : 1 - 1,400 (1,400/1,400)
9 exons
identity = 0.999
3'(1.000;1.000;1.000;0.996;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
GO :
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, nucl 3, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031477)
HIX0031477
HIT000194194
(
M12963
)
(Alcohol dehydrogenase 1A; EC=1.1.1.1; Alcohol dehydrogenase subunit alpha;)
genome : 100,197,531 - 100,212,142 (14,612)
query : 2 - 1,450 (1,449/1,450)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.999
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
GO :
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, nucl 3, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031477)
HIX0031477
HIT000387730
(
BC117442
)
(Alcohol dehydrogenase 1A; EC=1.1.1.1; Alcohol dehydrogenase subunit alpha;)
genome : 100,197,740 - 100,212,141 (14,402)
query : 1 - 1,239 (1,239/1,239)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
GO :
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, nucl 3, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031477)
HIX0031477
HIT000388898
(
BC126306
)
(Alcohol dehydrogenase 1A; EC=1.1.1.1; Alcohol dehydrogenase subunit alpha;)
genome : 100,197,740 - 100,212,141 (14,402)
query : 1 - 1,239 (1,239/1,239)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
GO :
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, nucl 3, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031477)
HIX0031477
HIT000265245
(
BC074738
)
(Alcohol dehydrogenase 1A; EC=1.1.1.1; Alcohol dehydrogenase subunit alpha;)
genome : 100,197,747 - 100,212,099 (14,353)
query : 1 - 1,190 (1,190/1,190)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
GO :
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, nucl 3, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031477)
HIX0031477
HIT000266669
(
BT019812
)
(Alcohol dehydrogenase 1A; EC=1.1.1.1; Alcohol dehydrogenase subunit alpha;)
genome : 100,197,783 - 100,208,822 (11,040)
query : 19 - 1,126 (1,108/1,128)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.982
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
GO :
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, nucl 3, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031477)
HIX0031477
HIT000428463
(
AK309597
)
(Alcohol dehydrogenase 1B; EC=1.1.1.1; Alcohol dehydrogenase subunit beta;)
genome : 100,202,972 - 100,212,160 (9,189)
query : 1 - 1,401 (1,401/1,401)
6 exons
identity = 0.996
3'(1.000;1.000;0.958;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR016040 : NAD(P)-binding domain
GO :
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, plas 4, nucl 3, extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031477)
HIX0031477
HIT000603749 (
ENST00000503461
)
(Alcohol dehydrogenase 1B; EC=1.1.1.1; Alcohol dehydrogenase subunit beta;)
genome : 100,202,972 - 100,212,160 (9,189)
query : 1 - 1,401 (1,401/1,401)
6 exons
identity = 0.996
3'(1.000;1.000;0.958;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, plas 4, nucl 3, extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031477)
HIX0031477
HIT000611359 (
ENST00000511656
)
(Alcohol dehydrogenase 1A; EC=1.1.1.1; Alcohol dehydrogenase subunit alpha;)
genome : 100,207,822 - 100,212,140 (4,319)
query : 1 - 513 (513/513)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, mito 6, extr 2, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031477)
HIX0024765
HIT000609770 (
ENST00000509939
)
(Hypothetical short protein.)
genome : 100,212,093 - 100,222,455 (10,363)
query : 1 - 677 (677/677)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024765)
HIX0004397
HIT000071882
(
AF153821
)
Representative transcript
(Alcohol dehydrogenase 1B; EC=1.1.1.1; Alcohol dehydrogenase subunit beta;)
genome : 100,226,121 - 100,242,556 (16,436)
query : 1 - 4,061 (4,061/4,080)
9 exons
identity = 0.995
3'(0.993;1.000;1.000;0.996;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
GO :
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28, nucl 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004397)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : AB188285
Macaca
sp. (Macaque) : AK240628
Danio
sp. (Zebrafish) : BC071367
Bos
sp. (Cow) : BC111290
Tetraodon
sp. (Tetraodon) : CR654140
Equus
sp. (Horse) : M64864
Takifugu
sp. (Fugu) : SINFRUT00000162068
Gallus
sp. (Chicken) : U73654
Canis
sp. (Dog) : XM_535667
Monodelphis
sp. (Opossum) : XR_030319
HIX0004397
HIT000116926 (
ENST00000305046
)
(Alcohol dehydrogenase 1B; EC=1.1.1.1; Alcohol dehydrogenase subunit beta;)
genome : 100,226,121 - 100,242,556 (16,436)
query : 1 - 4,072 (4,072/4,072)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28, nucl 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004397)
HIX0004397
HIT000478284 (
ENST00000394887
)
(Alcohol dehydrogenase 1B; EC=1.1.1.1; Alcohol dehydrogenase subunit beta;)
genome : 100,226,134 - 100,242,556 (16,423)
query : 1 - 4,059 (4,059/4,059)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28, nucl 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004397)
HIX0004397
HIT000197690 (
NM_000668
)
(Alcohol dehydrogenase 1B; EC=1.1.1.1; Alcohol dehydrogenase subunit beta;)
genome : 100,227,520 - 100,242,572 (15,053)
query : 1 - 2,689 (2,689/2,689)
9 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28, nucl 2, pero 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004397)
HIX0004397
HIT000100389
(
D00137
)
(Alcohol dehydrogenase 1B; EC=1.1.1.1; Alcohol dehydrogenase subunit beta;)
genome : 100,227,660 - 100,242,508 (14,849)
query : 1 - 2,485 (2,485/2,485)
9 exons
identity = 0.999
3'(1.000;1.000;1.000;0.996;1.000;1.000;0.993;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
GO :
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28, nucl 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004397)
HIX0004397
HIT000320976
(
X03350
)
(Alcohol dehydrogenase 1B; EC=1.1.1.1; Alcohol dehydrogenase subunit beta;)
genome : 100,227,663 - 100,242,557 (14,895)
query : 3 - 2,532 (2,530/2,532)
9 exons
identity = 0.996
3'(0.996;1.000;1.000;0.996;1.000;1.000;0.993;
1.000;0.989)5'
coverage = 0.999
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
GO :
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28, nucl 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004397)
HIX0004397
HIT000194802
(
M21692
)
(Alcohol dehydrogenase 1B; EC=1.1.1.1; Alcohol dehydrogenase subunit beta;)
genome : 100,227,741 - 100,242,520 (14,780)
query : 1 - 2,415 (2,415/2,415)
9 exons
identity = 0.994
3'(0.996;1.000;1.000;0.992;0.982;1.000;0.986;
0.990;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
GO :
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004397)
HIX0004397
HIT000056116
(
BX647469
)
(Alcohol dehydrogenase 1B; EC=1.1.1.1; Alcohol dehydrogenase subunit beta;)
genome : 100,228,402 - 100,242,555 (14,154)
query : 1 - 3,818 (3,818/3,836)
9 exons
identity = 0.998
3'(0.998;1.000;1.000;0.992;1.000;1.000;0.993;
0.999;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
GO :
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, E.R._mito 4.33333, plas 4, mito 4,
mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004397)
HIX0004397
HIT000041758
(
BC033009
)
(Alcohol dehydrogenase 1B; EC=1.1.1.1; Alcohol dehydrogenase subunit beta;)
genome : 100,228,405 - 100,242,558 (14,154)
query : 1 - 1,790 (1,790/1,805)
9 exons
identity = 0.998
3'(1.000;1.000;1.000;0.992;1.000;1.000;0.993;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
GO :
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28, nucl 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004397)
HIX0004397
HIT000615108 (
ENST00000515694
)
(Alcohol dehydrogenase 1B.)
genome : 100,228,400 - 100,242,555 (14,156)
query : 1 - 3,820 (3,820/3,820)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 9, cyto 9, plas 4, nucl 4, mito 4,
E.R._mito 3.33333, mito_pero 2.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004397)
HIX0004397
HIT000194923
(
M24317
)
(Alcohol dehydrogenase 1B; EC=1.1.1.1; Alcohol dehydrogenase subunit beta;)
genome : 100,228,537 - 100,242,518 (13,982)
query : 1 - 1,618 (1,618/1,618)
9 exons
identity = 0.997
3'(1.000;1.000;1.000;0.985;1.000;1.000;0.993;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
GO :
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28, nucl 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004397)
HIX0004397
HIT000500114
(
AK316501
)
(Alcohol dehydrogenase superfamily, zinc-type protein.)
genome : 100,228,575 - 100,242,556 (13,982)
query : 1 - 1,451 (1,451/1,451)
9 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.979;0.993;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR016040 : NAD(P)-binding domain
GO :
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, plas 1, extr 1, nucl 1, mito 1, pero 1,
extr_plas 1, mito_pero 1, mito_nucl 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004397)
HIX0004397
HIT000495642
(
AK301018
)
(Alcohol dehydrogenase 1B; EC=1.1.1.1; Alcohol dehydrogenase subunit beta;)
genome : 100,228,650 - 100,242,558 (13,909)
query : 1 - 1,646 (1,646/1,646)
10 exons
identity = 0.986
3'(1.000;0.849;1.000;0.996;1.000;1.000;0.993;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
GO :
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, pero 11, cyto_mito 9.5, mito 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004397)
HIX0004397
HIT000606710 (
ENST00000506651
)
(Alcohol dehydrogenase 1B.)
genome : 100,228,650 - 100,242,558 (13,909)
query : 1 - 1,667 (1,667/1,667)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 9, cyto 9, plas 4, nucl 4, mito 4,
E.R._mito 3.33333, mito_pero 2.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004397)
HIX0004397
HIT000498569
(
AK303945
)
(Alcohol dehydrogenase 1B; EC=1.1.1.1; Alcohol dehydrogenase subunit beta;)
genome : 100,228,653 - 100,242,558 (13,906)
query : 1 - 1,373 (1,373/1,373)
8 exons
identity = 0.996
3'(1.000;0.993;1.000;0.996;1.000;0.965;0.990;
1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR016040 : NAD(P)-binding domain
GO :
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, pero 7, mito_pero 5.5, nucl 5, extr_plas 3,
plas 2.5, extr 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004397)
HIX0004397
HIT000494033
(
AK299409
)
(Alcohol dehydrogenase 1B; EC=1.1.1.1; Alcohol dehydrogenase subunit beta;)
genome : 100,228,923 - 100,242,556 (13,634)
query : 1 - 1,231 (1,231/1,231)
9 exons
identity = 0.991
3'(1.000;1.000;1.000;0.996;0.956;0.978;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
GO :
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28, nucl 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004397)
HIX0004397
HIT000499020
(
AK304396
)
(Alcohol dehydrogenase 1B; EC=1.1.1.1; Alcohol dehydrogenase subunit beta;)
genome : 100,228,958 - 100,242,554 (13,597)
query : 1 - 1,002 (1,002/1,002)
8 exons
identity = 0.977
3'(1.000;1.000;1.000;0.996;0.883;0.909;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
GO :
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004397)
HIX0004397
HIT000055645
(
BX641105
)
(Alcohol dehydrogenase 1; EC=1.1.1.1; Fragment;)
genome : 100,234,664 - 100,240,024 (5,361)
query : 1 - 5,361 (5,361/5,382)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR016040 : NAD(P)-binding domain
GO :
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 7, mito 4, cyto_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004397)
HIX0004397
HIT000604709 (
ENST00000504498
)
(Alcohol dehydrogenase 1B.)
genome : 100,238,822 - 100,242,542 (3,721)
query : 1 - 694 (694/694)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, mito 7, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004397)
HIX0004397
HIT000430578
(
AK311712
)
(Conserved hypothetical protein.)
genome : 100,240,973 - 100,242,558 (1,586)
query : 1 - 1,187 (1,187/1,187)
2 exons
identity = 0.998
3'(0.998;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004397)
HIX0031470
HIT000197691 (
NM_000669
)
(Alcohol dehydrogenase 1C; EC=1.1.1.1; Alcohol dehydrogenase subunit gamma;)
genome : 100,257,650 - 100,273,917 (16,268)
query : 1 - 1,472 (1,472/1,497)
9 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.993;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, mito_pero 3.83333, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031470)
HIX0031470
HIT000260439
(
BC062476
)
(Alcohol dehydrogenase 1C; EC=1.1.1.1; Alcohol dehydrogenase subunit gamma;)
genome : 100,257,650 - 100,273,898 (16,249)
query : 1 - 1,453 (1,453/1,478)
9 exons
identity = 0.997
3'(1.000;0.993;1.000;0.996;0.995;0.989;0.993;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
GO :
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, mito_pero 3.83333, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031470)
HIX0031470
HIT000194152
(
M12272
)
Representative transcript
(Alcohol dehydrogenase 1C; EC=1.1.1.1; Alcohol dehydrogenase subunit gamma;)
genome : 100,257,649 - 100,273,903 (16,255)
query : 10 - 1,468 (1,459/1,486)
9 exons
identity = 0.998
3'(1.000;0.993;1.000;0.996;1.000;1.000;0.993;
1.000;1.000)5'
coverage = 0.982
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
GO :
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, mito_pero 3.83333, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031470)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AF508795
Macaca
sp. (Macaque) : AK240628
Oryzias
sp. (Medaka) : AY512892
Mus
sp. (Mouse) : BC013477
Danio
sp. (Zebrafish) : BC096855
Bos
sp. (Cow) : BC111290
Tetraodon
sp. (Tetraodon) : CR721062
Pongo
sp. (Orangutan) : CR858591
Equus
sp. (Horse) : M64864
Takifugu
sp. (Fugu) : SINFRUT00000155506
Gallus
sp. (Chicken) : U73654
Pan
sp. (Chimpanzee) : XM_001167004
Canis
sp. (Dog) : XM_535667
Monodelphis
sp. (Opossum) : XR_030319
HIX0031470
HIT000615097 (
ENST00000515683
)
(Alcohol dehydrogenase 1C; EC=1.1.1.1; Alcohol dehydrogenase subunit gamma;)
genome : 100,257,649 - 100,274,184 (16,536)
query : 1 - 1,740 (1,740/1,740)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_mito 12.3333, cyto_plas 12.3333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031470)
HIX0031470
HIT000321024
(
X04299
)
(Alcohol dehydrogenase 1C; EC=1.1.1.1; Alcohol dehydrogenase subunit gamma;)
genome : 100,257,652 - 100,273,903 (16,252)
query : 2 - 1,457 (1,456/1,457)
9 exons
identity = 0.997
3'(1.000;0.993;1.000;0.996;0.995;0.989;0.993;
1.000;1.000)5'
coverage = 0.999
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
GO :
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, mito_pero 3.83333, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031470)
HIX0031470
HIT000321028
(
X04350
)
(Alcohol dehydrogenase 1C; EC=1.1.1.1; Alcohol dehydrogenase subunit gamma;)
genome : 100,257,655 - 100,268,263 (10,609)
query : 1 - 1,224 (1,224/1,224)
7 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.990)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
GO :
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 12, lyso 2, plas 1, mito 1, E.R. 1,
pero 1, E.R._mito 1, mito_pero 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031470)
HIX0031470
HIT000265278
(
BC074771
)
(Alcohol dehydrogenase 1C; EC=1.1.1.1; Alcohol dehydrogenase subunit gamma;)
genome : 100,257,878 - 100,273,860 (15,983)
query : 1 - 1,187 (1,187/1,187)
9 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;0.995;1.000;0.993;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
GO :
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, mito_pero 3.83333, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031470)
HIX0031470
HIT000265293
(
BC074786
)
(Alcohol dehydrogenase 1C; EC=1.1.1.1; Alcohol dehydrogenase subunit gamma;)
genome : 100,257,878 - 100,273,859 (15,982)
query : 1 - 1,186 (1,186/1,186)
9 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.993;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
GO :
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, mito_pero 3.83333, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031470)
HIX0031470
HIT000262122
(
BC066227
)
(Alcohol dehydrogenase 1C; EC=1.1.1.1; Alcohol dehydrogenase subunit gamma;)
genome : 100,257,881 - 100,273,860 (15,980)
query : 1 - 1,184 (1,184/1,184)
9 exons
identity = 0.995
3'(0.981;0.993;1.000;0.996;0.995;0.989;0.993;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
GO :
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, mito_pero 3.83333, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031470)
HIX0031470
HIT000262123
(
BC066228
)
(Alcohol dehydrogenase 1C; EC=1.1.1.1; Alcohol dehydrogenase subunit gamma;)
genome : 100,257,881 - 100,273,860 (15,980)
query : 1 - 1,184 (1,184/1,184)
9 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;0.995;1.000;0.993;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
GO :
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, mito_pero 3.83333, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031470)
HIX0031470
HIT000262577
(
BC067419
)
(Alcohol dehydrogenase 1C; EC=1.1.1.1; Alcohol dehydrogenase subunit gamma;)
genome : 100,257,881 - 100,273,860 (15,980)
query : 1 - 1,184 (1,184/1,184)
9 exons
identity = 0.996
3'(0.981;0.993;1.000;0.996;0.995;1.000;0.993;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
GO :
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, mito_pero 3.83333, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031470)
HIX0031470
HIT000262578
(
BC067420
)
(Alcohol dehydrogenase 1C; EC=1.1.1.1; Alcohol dehydrogenase subunit gamma;)
genome : 100,257,881 - 100,273,860 (15,980)
query : 1 - 1,184 (1,184/1,184)
9 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;0.995;1.000;0.993;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
GO :
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, mito_pero 3.83333, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031470)
HIX0031470
HIT000262579
(
BC067421
)
(Alcohol dehydrogenase 1C; EC=1.1.1.1; Alcohol dehydrogenase subunit gamma;)
genome : 100,257,881 - 100,273,860 (15,980)
query : 1 - 1,184 (1,184/1,184)
9 exons
identity = 0.995
3'(1.000;0.993;1.000;0.996;0.991;0.989;0.993;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
GO :
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, mito_pero 3.83333, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031470)
HIX0031470
HIT000262580
(
BC067422
)
(Alcohol dehydrogenase 1C; EC=1.1.1.1; Alcohol dehydrogenase subunit gamma;)
genome : 100,257,881 - 100,273,860 (15,980)
query : 1 - 1,184 (1,184/1,184)
9 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;0.995;1.000;0.993;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
GO :
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, mito_pero 3.83333, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031470)
HIX0031470
HIT000609882 (
ENST00000510055
)
(Alcohol dehydrogenase 1C; EC=1.1.1.1; Alcohol dehydrogenase subunit gamma;)
genome : 100,264,083 - 100,273,887 (9,805)
query : 1 - 872 (872/872)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_mito 11.8333, cyto_plas 11.8333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031470)
HIX0031470
HIT000611119 (
ENST00000511397
)
(Alcohol dehydrogenase 1C; EC=1.1.1.1; Alcohol dehydrogenase subunit gamma;)
genome : 100,264,168 - 100,273,903 (9,736)
query : 1 - 581 (581/581)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 6, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031470)
HIX0031470
HIT000606040 (
ENST00000505942
)
(Alcohol dehydrogenase 1A; EC=1.1.1.1; Alcohol dehydrogenase subunit alpha;)
genome : 100,266,045 - 100,273,901 (7,857)
query : 1 - 564 (564/564)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 5, nucl 3, cyto_mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031470)
HIX0031505
HIT000197695 (
NM_000673
)
(Alcohol dehydrogenase class 4 mu/sigma chain; EC=1.1.1.1; Alcohol dehydrogenase class IV mu/sigma chain; Gastric alcohol dehydrogenase; Retinol dehydrogenase;)
genome : 100,333,418 - 100,356,667 (23,250)
query : 1 - 2,289 (2,289/2,307)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, mito 4, E.R._mito 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031505)
HIX0031505
HIT000654373 (
NM_001166504
)
(Alcohol dehydrogenase class 4 mu/sigma chain isoform 1.)
genome : 100,333,418 - 100,356,291 (22,874)
query : 1 - 2,102 (2,102/2,120)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, mito_pero 3.5, plas 3, mito 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031505)
HIX0031505
HIT000534967 (
ENST00000437033
)
(Alcohol dehydrogenase class 4 mu/sigma chain; EC=1.1.1.1; Alcohol dehydrogenase class IV mu/sigma chain; Gastric alcohol dehydrogenase; Retinol dehydrogenase;)
genome : 100,333,418 - 100,356,894 (23,477)
query : 1 - 2,516 (2,516/2,516)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, mito 4, E.R._mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031505)
HIX0031505
HIT000102830 (
ENST00000209665
)
(Alcohol dehydrogenase class 4 mu/sigma chain; EC=1.1.1.1; Alcohol dehydrogenase class IV mu/sigma chain; Gastric alcohol dehydrogenase; Retinol dehydrogenase;)
genome : 100,333,418 - 100,356,667 (23,250)
query : 1 - 2,289 (2,289/2,289)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, mito 4, E.R._mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031505)
HIX0031505
HIT000323579
(
X76342
)
Representative transcript
(Alcohol dehydrogenase class 4 mu/sigma chain; EC=1.1.1.1; Alcohol dehydrogenase class IV mu/sigma chain; Gastric alcohol dehydrogenase; Retinol dehydrogenase;)
genome : 100,333,435 - 100,356,450 (23,016)
query : 1 - 2,055 (2,055/2,055)
9 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
IPR028635 : Alcohol dehydrogenase family, zinc-type, class-IV subfamily
GO :
0004024 : Molecular Function : alcohol dehydrogenase activity, zinc-dependent
0004745 : Molecular Function : retinol dehydrogenase activity
0006069 : Biological Process : ethanol oxidation
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0019841 : Molecular Function : retinol binding
0035276 : Molecular Function : ethanol binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, mito 4, E.R._mito 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031505)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK144795
Oryzias
sp. (Medaka) : AY682722
Danio
sp. (Zebrafish) : BC071367
Tetraodon
sp. (Tetraodon) : CR654140
Bos
sp. (Cow) : ENSBTAT00000031640
Pongo
sp. (Orangutan) : ENSPPYT00000017372
Takifugu
sp. (Fugu) : SINFRUT00000155510
Gallus
sp. (Chicken) : U73654
Rattus
sp. (Rat) : X98746
Macaca
sp. (Macaque) : XM_001107097
Pan
sp. (Chimpanzee) : XM_001167089
Monodelphis
sp. (Opossum) : XM_001369736
Monodelphis
sp. (Opossum) : XM_001369771
Monodelphis
sp. (Opossum) : XM_001369802
Equus
sp. (Horse) : XM_001496708
HIX0031505
HIT000217929
(
U09623
)
(Alcohol dehydrogenase class 4 mu/sigma chain; EC=1.1.1.1; Alcohol dehydrogenase class IV mu/sigma chain; Gastric alcohol dehydrogenase; Retinol dehydrogenase;)
genome : 100,333,484 - 100,350,790 (17,307)
query : 37 - 1,964 (1,928/1,966)
8 exons
identity = 0.997
3'(0.995;1.000;1.000;1.000;0.995;1.000;1.000;
1.000)5'
coverage = 0.981
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
IPR028635 : Alcohol dehydrogenase family, zinc-type, class-IV subfamily
GO :
0004024 : Molecular Function : alcohol dehydrogenase activity, zinc-dependent
0004745 : Molecular Function : retinol dehydrogenase activity
0006069 : Biological Process : ethanol oxidation
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0019841 : Molecular Function : retinol binding
0035276 : Molecular Function : ethanol binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28, E.R._mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031505)
HIX0031505
HIT000217806
(
U07821
)
(Alcohol dehydrogenase class 4 mu/sigma chain; EC=1.1.1.1; Alcohol dehydrogenase class IV mu/sigma chain; Gastric alcohol dehydrogenase; Retinol dehydrogenase;)
genome : 100,333,701 - 100,356,474 (22,774)
query : 1 - 1,813 (1,813/1,813)
9 exons
identity = 0.997
3'(0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.980)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
IPR028635 : Alcohol dehydrogenase family, zinc-type, class-IV subfamily
GO :
0004024 : Molecular Function : alcohol dehydrogenase activity, zinc-dependent
0004745 : Molecular Function : retinol dehydrogenase activity
0006069 : Biological Process : ethanol oxidation
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0019841 : Molecular Function : retinol binding
0035276 : Molecular Function : ethanol binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, mito 4, E.R._mito 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031505)
HIX0031505
HIT000390475
(
BC131512
)
(Alcohol dehydrogenase class 4 mu/sigma chain; EC=1.1.1.1; Alcohol dehydrogenase class IV mu/sigma chain; Gastric alcohol dehydrogenase; Retinol dehydrogenase;)
genome : 100,333,758 - 100,356,462 (22,705)
query : 1 - 1,744 (1,744/1,744)
9 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
IPR028635 : Alcohol dehydrogenase family, zinc-type, class-IV subfamily
GO :
0004024 : Molecular Function : alcohol dehydrogenase activity, zinc-dependent
0004745 : Molecular Function : retinol dehydrogenase activity
0006069 : Biological Process : ethanol oxidation
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0019841 : Molecular Function : retinol binding
0035276 : Molecular Function : ethanol binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, mito 4, E.R._mito 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031505)
HIX0031505
HIT000331252
(
AK223472
)
(Alcohol dehydrogenase class 4 mu/sigma chain; EC=1.1.1.1; Alcohol dehydrogenase class IV mu/sigma chain; Gastric alcohol dehydrogenase; Retinol dehydrogenase;)
genome : 100,333,782 - 100,356,461 (22,680)
query : 1 - 1,719 (1,719/1,719)
9 exons
identity = 0.998
3'(0.996;1.000;1.000;0.996;0.995;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
IPR028635 : Alcohol dehydrogenase family, zinc-type, class-IV subfamily
GO :
0004024 : Molecular Function : alcohol dehydrogenase activity, zinc-dependent
0004745 : Molecular Function : retinol dehydrogenase activity
0006069 : Biological Process : ethanol oxidation
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0019841 : Molecular Function : retinol binding
0035276 : Molecular Function : ethanol binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, mito 4, E.R._mito 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031505)
HIX0031505
HIT000586518 (
ENST00000482593
)
(Alcohol dehydrogenase class 4 mu/sigma chain isoform 1.)
genome : 100,334,163 - 100,356,430 (22,268)
query : 1 - 1,420 (1,420/1,420)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 15, cyto 6.5, cyto_mito 5.83333, mito 4,
E.R._mito 3.83333, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031505)
HIX0031505
HIT000589456 (
ENST00000485660
)
(Alcohol dehydrogenase class 4 mu/sigma chain; EC=1.1.1.1; Alcohol dehydrogenase class IV mu/sigma chain; Gastric alcohol dehydrogenase; Retinol dehydrogenase;)
genome : 100,334,171 - 100,337,031 (2,861)
query : 1 - 556 (556/556)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 16.5, cyto_plas 13.3333, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031505)
HIX0031505
HIT000496320
(
AK301696
)
(Alcohol dehydrogenase class 4 mu/sigma chain isoform 1.)
genome : 100,334,195 - 100,356,291 (22,097)
query : 1 - 1,325 (1,325/1,325)
9 exons
identity = 0.999
3'(1.000;1.000;1.000;0.996;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
IPR028635 : Alcohol dehydrogenase family, zinc-type, class-IV subfamily
GO :
0004024 : Molecular Function : alcohol dehydrogenase activity, zinc-dependent
0004745 : Molecular Function : retinol dehydrogenase activity
0006069 : Biological Process : ethanol oxidation
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0019841 : Molecular Function : retinol binding
0035276 : Molecular Function : ethanol binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, mito_pero 3.5, plas 3, mito 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031505)
HIX0031505
HIT000581128 (
ENST00000476959
)
(Alcohol dehydrogenase class 4 mu/sigma chain isoform 1.)
genome : 100,334,195 - 100,356,291 (22,097)
query : 1 - 1,325 (1,325/1,325)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, mito_pero 3.5, plas 3, mito 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031505)
HIX0031505
HIT000496281
(
AK301657
)
(Alcohol dehydrogenase class 4 mu/sigma chain; EC=1.1.1.1; Alcohol dehydrogenase class IV mu/sigma chain; Gastric alcohol dehydrogenase; Retinol dehydrogenase;)
genome : 100,334,273 - 100,356,561 (22,289)
query : 1 - 1,210 (1,210/1,210)
8 exons
identity = 0.988
3'(1.000;1.000;1.000;1.000;1.000;0.875;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR016040 : NAD(P)-binding domain
IPR028635 : Alcohol dehydrogenase family, zinc-type, class-IV subfamily
GO :
0004024 : Molecular Function : alcohol dehydrogenase activity, zinc-dependent
0004745 : Molecular Function : retinol dehydrogenase activity
0006069 : Biological Process : ethanol oxidation
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0019841 : Molecular Function : retinol binding
0035276 : Molecular Function : ethanol binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, E.R._mito 2.5, extr 2, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031505)
HIX0031505
HIT000431720
(
AK312854
)
(Alcohol dehydrogenase class 4 mu/sigma chain; EC=1.1.1.1; Alcohol dehydrogenase class IV mu/sigma chain; Gastric alcohol dehydrogenase; Retinol dehydrogenase;)
genome : 100,334,305 - 100,356,589 (22,285)
query : 1 - 1,325 (1,325/1,325)
9 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;0.995;1.000;1.000;
1.000;0.995)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
IPR028635 : Alcohol dehydrogenase family, zinc-type, class-IV subfamily
GO :
0004024 : Molecular Function : alcohol dehydrogenase activity, zinc-dependent
0004745 : Molecular Function : retinol dehydrogenase activity
0006069 : Biological Process : ethanol oxidation
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0019841 : Molecular Function : retinol binding
0035276 : Molecular Function : ethanol binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, mito 4, E.R._mito 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031505)
HIX0031505
HIT000193090
(
L33179
)
(Alcohol dehydrogenase class 4 mu/sigma chain; EC=1.1.1.1; Alcohol dehydrogenase class IV mu/sigma chain; Gastric alcohol dehydrogenase; Retinol dehydrogenase;)
genome : 100,334,305 - 100,350,790 (16,486)
query : 19 - 1,125 (1,107/1,125)
8 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.990)5'
coverage = 0.984
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
IPR028635 : Alcohol dehydrogenase family, zinc-type, class-IV subfamily
GO :
0004024 : Molecular Function : alcohol dehydrogenase activity, zinc-dependent
0004745 : Molecular Function : retinol dehydrogenase activity
0006069 : Biological Process : ethanol oxidation
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0019841 : Molecular Function : retinol binding
0035276 : Molecular Function : ethanol binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28, E.R._mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031505)
HIX0031505
HIT000429677
(
AK310811
)
(Alcohol dehydrogenase class 4 mu/sigma chain; EC=1.1.1.1; Alcohol dehydrogenase class IV mu/sigma chain; Gastric alcohol dehydrogenase; Retinol dehydrogenase;)
genome : 100,340,172 - 100,356,589 (16,418)
query : 1 - 972 (972/972)
6 exons
identity = 0.995
3'(1.000;0.992;1.000;0.970;0.990;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR016040 : NAD(P)-binding domain
IPR028635 : Alcohol dehydrogenase family, zinc-type, class-IV subfamily
GO :
0004024 : Molecular Function : alcohol dehydrogenase activity, zinc-dependent
0004745 : Molecular Function : retinol dehydrogenase activity
0006069 : Biological Process : ethanol oxidation
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0019841 : Molecular Function : retinol binding
0035276 : Molecular Function : ethanol binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 17, mito 5, E.R. 3, extr 2, nucl 2, cyto 2,
cyto_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031505)
HIX0031505
HIT000216715
(
S77168
)
(Alcohol dehydrogenase class 4 mu/sigma chain; EC=1.1.1.1; Alcohol dehydrogenase class IV mu/sigma chain; Gastric alcohol dehydrogenase; Retinol dehydrogenase;)
genome : 100,340,207 - 100,341,836 (1,630)
query : 1 - 219 (219/219)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR016040 : NAD(P)-binding domain
IPR028635 : Alcohol dehydrogenase family, zinc-type, class-IV subfamily
GO :
0004024 : Molecular Function : alcohol dehydrogenase activity, zinc-dependent
0004745 : Molecular Function : retinol dehydrogenase activity
0006069 : Biological Process : ethanol oxidation
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0019841 : Molecular Function : retinol binding
0035276 : Molecular Function : ethanol binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, extr 10, cyto_mito 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031505)
HIX0031505
HIT000578332 (
ENST00000474027
)
(Alcohol dehydrogenase class 4 mu/sigma chain isoform 1.)
genome : 100,349,000 - 100,351,448 (2,449)
query : 1 - 589 (589/589)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 14, cyto_nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031505)
HIX0205584
HIT000606558 (
ENST00000506494
)
(Conserved hypothetical protein.)
genome : 100,390,755 - 100,419,855 (29,101)
query : 1 - 658 (658/658)
4 exons
identity = 0.997
3'(1.000;1.000;1.000;0.981)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205584)
HIX0022734
HIT000210431 (
NM_032149
)
(Conserved hypothetical protein.)
genome : 100,432,161 - 100,463,459 (31,299)
query : 1 - 1,635 (1,635/1,652)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.3333, mito_nucl 10.6667,
cyto 10
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022734)
HIX0022734
HIT000124630 (
ENST00000326581
)
(Conserved hypothetical protein.)
genome : 100,432,161 - 100,463,460 (31,300)
query : 1 - 1,636 (1,636/1,636)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.3333, mito_nucl 10.6667,
cyto 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022734)
HIX0022734
HIT000017952
(
AK093085
)
(Conserved hypothetical protein.)
genome : 100,432,169 - 100,463,442 (31,274)
query : 1 - 1,803 (1,803/1,803)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 12, nucl 8.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022734)
HIX0022734
HIT000581344 (
ENST00000477187
)
(Conserved hypothetical protein.)
genome : 100,432,169 - 100,463,442 (31,274)
query : 1 - 1,803 (1,803/1,803)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 12, nucl 8.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022734)
HIX0022734
HIT000614133 (
ENST00000514652
)
(Conserved hypothetical protein.)
genome : 100,432,169 - 100,462,920 (30,752)
query : 1 - 2,542 (2,542/2,542)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 13.3333, mito_nucl 9.66667,
cyto 9, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022734)
HIX0022734
HIT000331125
(
AK223345
)
Representative transcript
(Conserved hypothetical protein.)
genome : 100,432,174 - 100,463,443 (31,270)
query : 1 - 1,606 (1,606/1,626)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.3333, mito_nucl 10.6667,
cyto 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022734)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB169375
Mus
sp. (Mouse) : AK016318
Bos
sp. (Cow) : BC111327
Canis
sp. (Dog) : ENSCAFT00000016724
Equus
sp. (Horse) : ENSECAT00000016293
Pongo
sp. (Orangutan) : ENSPPYT00000017373
Rattus
sp. (Rat) : XM_001078280
Pan
sp. (Chimpanzee) : XM_001167179
Monodelphis
sp. (Opossum) : XM_001369699
HIX0022734
HIT000433577
(
AK314711
)
(Conserved hypothetical protein.)
genome : 100,432,178 - 100,463,266 (31,089)
query : 1 - 1,425 (1,425/1,425)
9 exons
identity = 0.997
5'(1.000;1.000;0.981;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15.8333, cyto 12,
mito_nucl 9.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022734)
HIX0022734
HIT000025434
(
AL136838
)
(Conserved hypothetical protein.)
genome : 100,432,200 - 100,463,459 (31,260)
query : 1 - 1,596 (1,596/1,613)
9 exons
identity = 0.997
5'(1.000;1.000;0.981;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15.8333, cyto 12,
mito_nucl 9.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022734)
HIX0022734
HIT000265266
(
BC074759
)
(Conserved hypothetical protein.)
genome : 100,434,200 - 100,463,296 (29,097)
query : 1 - 1,149 (1,149/1,149)
8 exons
identity = 0.997
5'(1.000;0.986;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15.8333, cyto 12,
mito_nucl 9.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022734)
HIX0022734
HIT000268390
(
CR533542
)
(Conserved hypothetical protein.)
genome : 100,434,239 - 100,463,370 (29,132)
query : 1 - 1,184 (1,184/1,184)
8 exons
identity = 0.996
5'(1.000;0.981;1.000;1.000;1.000;1.000;0.977;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 15.5, cyto 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022734)
HIX0022734
HIT000603558 (
ENST00000503257
)
(Conserved hypothetical protein.)
genome : 100,440,399 - 100,451,112 (10,714)
query : 1 - 540 (540/540)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, nucl 10, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022734)
HIX0022734
HIT000263956
(
BC069805
)
(Conserved hypothetical protein.)
genome : 100,461,585 - 100,463,384 (1,800)
query : 1 - 346 (346/346)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 7, cyto 6.5, cyto_nucl 6.5, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022734)
HIX0004399
HIT000559965 (
NM_001134665
)
(tRNA methyltransferase 10 homolog A; EC=2.1.1.-; RNA (guanine-9-)-methyltransferase domain-containing protein 2;)
genome : 100,467,864 - 100,485,189 (17,326)
query : 1 - 3,544 (3,544/3,552)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.998
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004399)
HIX0004399
HIT000559966 (
NM_001134666
)
(tRNA methyltransferase 10 homolog A; EC=2.1.1.-; RNA (guanine-9-)-methyltransferase domain-containing protein 2;)
genome : 100,467,864 - 100,485,189 (17,326)
query : 1 - 3,533 (3,533/3,541)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.998
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004399)
HIX0004399
HIT000213567_03 (
NM_152292
)
(tRNA methyltransferase 10 homolog A; EC=2.1.1.-; RNA (guanine-9-)-methyltransferase domain-containing protein 2;)
genome : 100,467,864 - 100,484,825 (16,962)
query : 1 - 3,714 (3,714/3,722)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.998
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004399)
HIX0004399
HIT000040542_03
(
BC028373
)
Representative transcript
(tRNA methyltransferase 10 homolog A; EC=2.1.1.-; RNA (guanine-9-)-methyltransferase domain-containing protein 2;)
genome : 100,467,881 - 100,484,825 (16,945)
query : 1 - 3,695 (3,695/3,711)
8 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.999
EC number :
EC 2.1.1.-
InterPro :
IPR007356 : tRNA (guanine-N1-)-methyltransferase, eukaryotic
IPR016009 : tRNA methyltransferase TRMD/TRM10-type domain
IPR028564 : tRNA methyltransferase TRM10-type domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004399)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK146481
Rattus
sp. (Rat) : BC099190
Bos
sp. (Cow) : BC105223
Danio
sp. (Zebrafish) : BC107507
Gallus
sp. (Chicken) : BX930982
Tetraodon
sp. (Tetraodon) : CR664543
Equus
sp. (Horse) : ENSECAT00000012933
Monodelphis
sp. (Opossum) : ENSMODT00000026365
Oryzias
sp. (Medaka) : ENSORLT00000015111
Pongo
sp. (Orangutan) : ENSPPYT00000017374
Takifugu
sp. (Fugu) : SINFRUT00000139923
Macaca
sp. (Macaque) : XM_001107528
Pan
sp. (Chimpanzee) : XM_001167367
Canis
sp. (Dog) : XM_544994
HIX0004399
HIT000478275 (
ENST00000394877
)
(tRNA methyltransferase 10 homolog A; EC=2.1.1.-; RNA (guanine-9-)-methyltransferase domain-containing protein 2;)
genome : 100,467,866 - 100,485,174 (17,309)
query : 1 - 3,516 (3,516/3,516)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004399)
HIX0004399
HIT000111092 (
ENST00000273962
)
(tRNA methyltransferase 10 homolog A; EC=2.1.1.-; RNA (guanine-9-)-methyltransferase domain-containing protein 2;)
genome : 100,467,884 - 100,484,825 (16,942)
query : 1 - 3,694 (3,694/3,694)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004399)
HIX0004399
HIT000002807
(
AK000332
)
(tRNA methyltransferase 10 homolog A; EC=2.1.1.-; RNA (guanine-9-)-methyltransferase domain-containing protein 2;)
genome : 100,469,299 - 100,485,174 (15,876)
query : 3 - 2,084 (2,082/2,099)
8 exons
identity = 0.999
3'(0.999;1.000;0.993;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.999
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 16, cyto 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004399)
HIX0004399
HIT000478274 (
ENST00000394876
)
(tRNA methyltransferase 10 homolog A; EC=2.1.1.-; RNA (guanine-9-)-methyltransferase domain-containing protein 2;)
genome : 100,469,770 - 100,485,189 (15,420)
query : 1 - 1,638 (1,638/1,638)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004399)
HIX0004399
HIT000069496
(
AF106046
)
(tRNA methyltransferase 10 homolog A; EC=2.1.1.-; RNA (guanine-9-)-methyltransferase domain-containing protein 2;)
genome : 100,470,102 - 100,479,236 (9,135)
query : 1 - 846 (846/860)
6 exons
identity = 0.993
3'(0.985;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.1.1.-
InterPro :
IPR007356 : tRNA (guanine-N1-)-methyltransferase, eukaryotic
IPR016009 : tRNA methyltransferase TRMD/TRM10-type domain
IPR028564 : tRNA methyltransferase TRM10-type domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 14.5, nucl 5.5, mito 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004399)
HIX0004399
HIT000432414
(
AK313548
)
(tRNA methyltransferase 10 homolog A; EC=2.1.1.-; RNA (guanine-9-)-methyltransferase domain-containing protein 2;)
genome : 100,470,245 - 100,485,189 (14,945)
query : 1 - 1,163 (1,163/1,163)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 2.1.1.-
InterPro :
IPR007356 : tRNA (guanine-N1-)-methyltransferase, eukaryotic
IPR016009 : tRNA methyltransferase TRMD/TRM10-type domain
IPR028564 : tRNA methyltransferase TRM10-type domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004399)
HIX0004399
HIT000553302 (
ENST00000455368
)
(tRNA methyltransferase 10 homolog A; EC=2.1.1.-; RNA (guanine-9-)-methyltransferase domain-containing protein 2;)
genome : 100,474,970 - 100,484,887 (9,918)
query : 1 - 802 (802/802)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, cyto 15.5, nucl 14.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004399)
HIX0004399
HIT000614035 (
ENST00000514547
)
(tRNA methyltransferase 10 homolog A; EC=2.1.1.-; RNA (guanine-9-)-methyltransferase domain-containing protein 2;)
genome : 100,474,988 - 100,484,880 (9,893)
query : 1 - 788 (788/788)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, cyto 15.5, nucl 14.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004399)
HIX0004399
HIT000615237 (
ENST00000515831
)
(tRNA methyltransferase 10 homolog A; EC=2.1.1.-; RNA (guanine-9-)-methyltransferase domain-containing protein 2;)
genome : 100,477,303 - 100,478,687 (1,385)
query : 1 - 261 (261/261)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, mito 9, nucl 8, cyto 5, extr_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004399)
HIX0004399
HIT000607391 (
ENST00000507394
)
(tRNA methyltransferase 10 homolog A; EC=2.1.1.-; RNA (guanine-9-)-methyltransferase domain-containing protein 2;)
genome : 100,478,846 - 100,484,829 (5,984)
query : 1 - 846 (846/846)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, nucl 14.5, cyto 13.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004399)
HIX0216067
HIT000604904 (
ENST00000504724
)
(Conserved hypothetical protein.)
genome : 100,485,240 - 100,496,010 (10,771)
query : 1 - 555 (555/555)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 7, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216067)
HIX0215940
HIT000388563
(
BC125110
)
(Microsomal triglyceride transfer protein large subunit; Precursor;)
genome : 100,496,027 - 100,544,052 (48,026)
query : 1 - 2,772 (2,772/2,772)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001747 : Lipid transport protein, N-terminal
IPR011030 : Vitellinogen, superhelical
IPR015816 : Vitellinogen, beta-sheet N-terminal
IPR015819 : Lipid transport protein, beta-sheet shell
GO :
0005319 : Molecular Function : lipid transporter activity
0006869 : Biological Process : lipid transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, E.R. 11, pero 4, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215940)
HIX0215940
HIT000388564
(
BC125111
)
(Microsomal triglyceride transfer protein large subunit; Precursor;)
genome : 100,496,027 - 100,544,052 (48,026)
query : 1 - 2,772 (2,772/2,772)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001747 : Lipid transport protein, N-terminal
IPR011030 : Vitellinogen, superhelical
IPR015816 : Vitellinogen, beta-sheet N-terminal
IPR015819 : Lipid transport protein, beta-sheet shell
GO :
0005319 : Molecular Function : lipid transporter activity
0006869 : Biological Process : lipid transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, E.R. 11, pero 4, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215940)
HIX0215940
HIT000324446
(
X91148
)
(Microsomal triglyceride transfer protein large subunit; Precursor;)
genome : 100,496,043 - 100,545,154 (49,112)
query : 1 - 3,861 (3,861/3,880)
18 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.995;1.000;1.000;1.000;
1.000;1.000;1.000;0.993)3'
coverage = 1.000
InterPro :
IPR001747 : Lipid transport protein, N-terminal
IPR011030 : Vitellinogen, superhelical
IPR015816 : Vitellinogen, beta-sheet N-terminal
IPR015819 : Lipid transport protein, beta-sheet shell
GO :
0005319 : Molecular Function : lipid transporter activity
0006869 : Biological Process : lipid transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, E.R. 11, pero 4, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215940)
HIX0215940
HIT000323529
(
X75500
)
Representative transcript
(Microsomal triglyceride transfer protein large subunit; Precursor;)
genome : 100,496,043 - 100,544,626 (48,584)
query : 1 - 3,330 (3,330/3,330)
18 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR001747 : Lipid transport protein, N-terminal
IPR011030 : Vitellinogen, superhelical
IPR015816 : Vitellinogen, beta-sheet N-terminal
IPR015819 : Lipid transport protein, beta-sheet shell
GO :
0005319 : Molecular Function : lipid transporter activity
0006869 : Biological Process : lipid transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, E.R. 11, pero 4, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215940)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : AJ428850
Bos
sp. (Cow) : BC151485
Gallus
sp. (Chicken) : BX930273
Monodelphis
sp. (Opossum) : ENSMODT00000026363
Pongo
sp. (Orangutan) : ENSPPYT00000017375
Mus
sp. (Mouse) : EU553486
Tetraodon
sp. (Tetraodon) : GSTENT00023255001
Takifugu
sp. (Fugu) : SINFRUT00000149051
Rattus
sp. (Rat) : XM_001076172
Macaca
sp. (Macaque) : XM_001107709
Pan
sp. (Chimpanzee) : XM_001167562
Equus
sp. (Horse) : XM_001498490
Canis
sp. (Dog) : XM_544995
HIX0205703
HIT000608501 (
ENST00000508578
)
(Conserved hypothetical protein.)
genome : 100,515,956 - 100,547,070 (31,115)
query : 1 - 359 (359/359)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205703)
HIX0004400
HIT000028191
(
AL833279
)
(Domain of unknown function DUF4585 domain containing protein.)
genome : 100,557,689 - 100,571,412 (13,724)
query : 1 - 5,692 (5,692/5,708)
2 exons
identity = 0.997
3'(0.997;0.997)5'
coverage = 1.000
InterPro :
IPR027838 : Domain of unknown function DUF4585
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 16.5, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004400)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : ENSBTAT00000047866
Macaca
sp. (Macaque) : ENSMMUT00000041949
Rattus
sp. (Rat) : ENSRNOT00000055468
Tetraodon
sp. (Tetraodon) : GSTENT00023253001
Takifugu
sp. (Fugu) : SINFRUT00000181113
Pan
sp. (Chimpanzee) : XM_001148831
Danio
sp. (Zebrafish) : XM_001339272
Monodelphis
sp. (Opossum) : XM_001369516
Equus
sp. (Horse) : XM_001496866
Canis
sp. (Dog) : XM_544996
HIX0004400
HIT000027290
(
AL832378
)
Representative transcript
(Domain of unknown function DUF4585 domain containing protein.)
genome : 100,557,693 - 100,571,614 (13,922)
query : 1 - 5,887 (5,887/5,906)
2 exons
identity = 0.999
3'(0.999;0.998)5'
coverage = 1.000
InterPro :
IPR027838 : Domain of unknown function DUF4585
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 13.5, cyto 8.5, extr 2, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004400)
HIX0004400
HIT000611522 (
ENST00000511828
)
(Histone deacetylase superfamily protein.)
genome : 100,557,686 - 100,575,805 (18,120)
query : 1 - 10,086 (10,086/10,086)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, cyto 15, nucl 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004400)
HIX0004396
HIT000052128
(
BC039065
)
(Alcohol dehydrogenase 6 isoform 2.)
genome : 100,123,795 - 100,140,392 (16,598)
query : 1 - 3,341 (3,341/3,411)
7 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000;1.000;0.990)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
IPR028633 : Alcohol dehydrogenase family, zinc-type, class-V subfamily
GO :
0004024 : Molecular Function : alcohol dehydrogenase activity, zinc-dependent
0006069 : Biological Process : ethanol oxidation
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0035276 : Molecular Function : ethanol binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004396)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AY310136
Oryzias
sp. (Medaka) : AY682722
Bos
sp. (Cow) : BC112630
Pongo
sp. (Orangutan) : CR859958
Macaca
sp. (Macaque) : ENSMMUT00000022453
Gallus
sp. (Chicken) : U73654
Equus
sp. (Horse) : XM_001496708
Pan
sp. (Chimpanzee) : XM_517358
Canis
sp. (Dog) : XM_535666
HIX0004396
HIT000017635
(
AK092768
)
Representative transcript
(Alcohol dehydrogenase 6 isoform 1.)
genome : 100,123,795 - 100,140,403 (16,609)
query : 1 - 2,803 (2,803/2,803)
9 exons
identity = 0.999
3'(0.999;1.000;1.000;0.996;1.000;1.000;1.000;
1.000;0.991)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR002328 : Alcohol dehydrogenase, zinc-type, conserved site
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR013154 : Alcohol dehydrogenase GroES-like
IPR016040 : NAD(P)-binding domain
IPR028633 : Alcohol dehydrogenase family, zinc-type, class-V subfamily
GO :
0004024 : Molecular Function : alcohol dehydrogenase activity, zinc-dependent
0006069 : Biological Process : ethanol oxidation
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0035276 : Molecular Function : ethanol binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, plas 9, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004396)
HIX0004396
HIT000485636 (
NM_001102470
)
(Alcohol dehydrogenase 6 isoform 1.)
genome : 100,123,795 - 100,140,403 (16,609)
query : 1 - 2,803 (2,803/2,803)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.991)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, plas 11, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004396)
HIX0004396
HIT000478294 (
ENST00000394897
)
(Alcohol dehydrogenase 6; EC=1.1.1.1;)
genome : 100,123,795 - 100,140,392 (16,598)
query : 1 - 3,337 (3,337/3,337)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004396)
HIX0004396
HIT000478296 (
ENST00000394899
)
(Alcohol dehydrogenase 6; EC=1.1.1.1;)
genome : 100,123,796 - 100,140,403 (16,608)
query : 1 - 2,802 (2,802/2,802)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, plas 9, mito 3, pero 3, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004396)
HIX0004396
HIT000499939
(
AK316326
)
(Alcohol dehydrogenase 1B; EC=1.1.1.1; Alcohol dehydrogenase subunit beta;)
genome : 100,125,176 - 100,140,331 (15,156)
query : 1 - 991 (991/991)
7 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.975)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR002085 : Alcohol dehydrogenase superfamily, zinc-type
IPR011032 : GroES (chaperonin 10)-like
IPR013149 : Alcohol dehydrogenase, C-terminal
IPR016040 : NAD(P)-binding domain
IPR028633 : Alcohol dehydrogenase family, zinc-type, class-V subfamily
GO :
0004024 : Molecular Function : alcohol dehydrogenase activity, zinc-dependent
0006069 : Biological Process : ethanol oxidation
0008270 : Molecular Function : zinc ion binding
0016491 : Molecular Function : oxidoreductase activity
0035276 : Molecular Function : ethanol binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 23, extr 5, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004396)
HIX0004396
HIT000506112 (
ENST00000407820
)
(Alcohol dehydrogenase 1; EC=1.1.1.1; ADH3; Alcohol dehydrogenase subunit alpha;)
genome : 100,125,176 - 100,140,331 (15,156)
query : 1 - 991 (991/991)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 23, extr 5, E.R. 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004396)
HIX0004396
HIT000607474 (
ENST00000507484
)
(Alcohol dehydrogenase 1; EC=1.1.1.1; ADH3; Alcohol dehydrogenase subunit alpha;)
genome : 100,125,176 - 100,140,331 (15,156)
query : 1 - 991 (991/991)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 23, extr 5, E.R. 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004396)
HIX0004396
HIT000104786 (
ENST00000237653
)
(Alcohol dehydrogenase 6; EC=1.1.1.1;)
genome : 100,125,879 - 100,140,694 (14,816)
query : 1 - 1,691 (1,691/1,691)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, plas 8, mito 3.5, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004396)
HIX0004396
HIT000197694 (
NM_000672
)
(Alcohol dehydrogenase 6; EC=1.1.1.1;)
genome : 100,125,879 - 100,140,403 (14,525)
query : 1 - 1,400 (1,400/1,400)
8 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.991)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, plas 11, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004396)
HIX0004396
HIT000608481 (
ENST00000508558
)
(Alcohol dehydrogenase 6; EC=1.1.1.1;)
genome : 100,128,603 - 100,140,400 (11,798)
query : 1 - 863 (863/863)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00071 : Fatty acid metabolism (28)
00260 : Glycine, serine and threonine metabolism (58)
00350 : Tyrosine metabolism (57)
00625 : Chloroalkane and chloroalkene degradation (15)
00626 : Naphthalene degradation (8)
00830 : Retinol metabolism (13)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, plas 9, mito 3.5, E.R._mito 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004396)
HIX0031471
HIT000612974 (
ENST00000513404
)
(Conserved hypothetical protein.)
genome : 100,484,918 - 100,504,573 (19,656)
query : 1 - 564 (564/564)
4 exons
identity = 0.988
5'(0.983;0.975;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031471)
HIX0031471
HIT000605297 (
ENST00000505142
)
(Conserved hypothetical protein.)
genome : 100,484,982 - 100,503,163 (18,182)
query : 1 - 537 (537/537)
4 exons
identity = 0.996
5'(0.982;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031471)
HIX0031471
HIT000606921 (
ENST00000506883
)
(Lipid transport protein, N-terminal domain containing protein.)
genome : 100,484,985 - 100,510,910 (25,926)
query : 1 - 547 (547/549)
4 exons
identity = 0.989
5'(0.981;0.979;1.000;1.000)3'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, nucl 9.5, cyto_nucl 8.5, cyto 6.5, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031471)
HIX0031471
HIT000497226
(
AK302602
)
(Microsomal triglyceride transfer protein large subunit; Precursor;)
genome : 100,485,240 - 100,544,380 (59,141)
query : 3 - 3,156 (3,154/3,156)
18 exons
identity = 0.999
5'(0.994;1.000;1.000;1.000;1.000;0.993;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.998)3'
coverage = 0.999
InterPro :
IPR001747 : Lipid transport protein, N-terminal
IPR011030 : Vitellinogen, superhelical
IPR015816 : Vitellinogen, beta-sheet N-terminal
IPR015819 : Lipid transport protein, beta-sheet shell
GO :
0005319 : Molecular Function : lipid transporter activity
0006869 : Biological Process : lipid transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 16, cyto 9, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031471)
HIX0031471
HIT000614591 (
ENST00000515141
)
(Conserved hypothetical protein.)
genome : 100,485,238 - 100,504,631 (19,394)
query : 1 - 608 (608/608)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031471)
HIX0031471
HIT000197299 (
NM_000253
)
(Lipid transport protein, N-terminal domain containing protein.)
genome : 100,485,240 - 100,545,154 (59,915)
query : 1 - 4,090 (4,090/4,093)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, E.R. 11, pero 4, plas 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031471)
HIX0031471
HIT000555651 (
ENST00000457717
)
(Lipid transport protein, N-terminal domain containing protein.)
genome : 100,485,240 - 100,545,156 (59,917)
query : 1 - 4,092 (4,092/4,092)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, E.R. 11, pero 4, plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031471)
HIX0031471
HIT000610786 (
ENST00000511045
)
(Lipid transport protein, N-terminal domain containing protein.)
genome : 100,485,240 - 100,544,380 (59,141)
query : 1 - 3,154 (3,154/3,154)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 16, cyto 9, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031471)
HIX0031471
HIT000605251 (
ENST00000505094
)
(Conserved hypothetical protein.)
genome : 100,485,240 - 100,504,579 (19,340)
query : 1 - 554 (554/554)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031471)
HIX0031471
HIT000611317 (
ENST00000511610
)
(Conserved hypothetical protein.)
genome : 100,485,240 - 100,503,129 (17,890)
query : 1 - 551 (551/551)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 14, extr 9, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031471)
HIX0031471
HIT000109742 (
ENST00000265517
)
(Lipid transport protein, N-terminal domain containing protein.)
genome : 100,495,864 - 100,545,154 (49,291)
query : 1 - 4,037 (4,037/4,037)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, E.R. 11, pero 4, plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031471)
HIX0031471
HIT000260587
(
BC062696
)
(Microsomal triglyceride transfer protein large subunit; Precursor;)
genome : 100,495,981 - 100,505,343 (9,363)
query : 5 - 1,152 (1,148/1,181)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 0.997
InterPro :
IPR001747 : Lipid transport protein, N-terminal
IPR015816 : Vitellinogen, beta-sheet N-terminal
IPR015819 : Lipid transport protein, beta-sheet shell
GO :
0005319 : Molecular Function : lipid transporter activity
0006869 : Biological Process : lipid transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031471)
HIX0031471
HIT000322331
(
X59657
)
(Microsomal triglyceride transfer protein large subunit; Precursor;)
genome : 100,495,981 - 100,544,441 (48,461)
query : 1 - 3,207 (3,207/3,224)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.995;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001747 : Lipid transport protein, N-terminal
IPR011030 : Vitellinogen, superhelical
IPR015816 : Vitellinogen, beta-sheet N-terminal
IPR015819 : Lipid transport protein, beta-sheet shell
GO :
0005319 : Molecular Function : lipid transporter activity
0006869 : Biological Process : lipid transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, E.R. 11, pero 4, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031471)
HIX0031471
HIT000384458
(
AK225328
)
(Microsomal triglyceride transfer protein large subunit; Precursor;)
genome : 100,495,981 - 100,544,230 (48,250)
query : 1 - 2,996 (2,996/2,996)
18 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.990;1.000;
1.000;0.984;0.994;1.000)3'
coverage = 1.000
InterPro :
IPR001747 : Lipid transport protein, N-terminal
IPR011030 : Vitellinogen, superhelical
IPR015816 : Vitellinogen, beta-sheet N-terminal
IPR015819 : Lipid transport protein, beta-sheet shell
GO :
0005319 : Molecular Function : lipid transporter activity
0006869 : Biological Process : lipid transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, E.R. 11, pero 4, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031471)
HIX0031471
HIT000520831 (
ENST00000422897
)
(Lipid transport protein, N-terminal domain containing protein.)
genome : 100,495,981 - 100,505,350 (9,370)
query : 1 - 1,155 (1,155/1,155)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031471)
HIX0031471
HIT000423590
(
AK290793
)
Representative transcript
(Microsomal triglyceride transfer protein large subunit; Precursor;)
genome : 100,495,999 - 100,544,249 (48,251)
query : 1 - 2,997 (2,997/2,997)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.994;1.000)3'
coverage = 1.000
InterPro :
IPR001747 : Lipid transport protein, N-terminal
IPR011030 : Vitellinogen, superhelical
IPR015816 : Vitellinogen, beta-sheet N-terminal
IPR015819 : Lipid transport protein, beta-sheet shell
GO :
0005319 : Molecular Function : lipid transporter activity
0006869 : Biological Process : lipid transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, E.R. 11, pero 4, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031471)
AC073855.5
99000001-99031890 F +
NCBI
AC019077.9
99031891-99222327 F +
NCBI
AC078961.23
99222328-99254010 F -
NCBI
AC058823.4
99254011-99398287 F +
NCBI
AC108159.5
99398288-99428064 F +
NCBI
AC074120.9
99428065-99576077 F +
NCBI
AC114811.3
99576078-99735702 F +
NCBI
AC093836.3
99735703-99839879 F +
NCBI
AC019131.7
99839880-100046619 F +
NCBI
AP002026.2
100046620-100188560 F +
NCBI
AC097530.3
100188561-100302591 F +
NCBI
AP001960.2
100302592-100443321 F -
NCBI
AC083902.5
100443322-100591369 F +
NCBI
AC084421.4
100591370-100600000 F +
NCBI