bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0024604
HIT000614516 (
ENST00000515059
)
(Bone morphogenetic protein receptor type-1B; BMP type-1B receptor; BMPR-1B; EC=2.7.11.30; AltName: CD_antigen=CDw293; Precursor;)
genome : 95,679,119 - 96,079,599 (400,481)
query : 1 - 5,567 (5,567/5,567)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.30
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 10, cyto 8, nucl 7, plas 3, E.R. 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024604)
HIX0024604
HIT000198201 (
NM_001203
)
(Bone morphogenetic protein receptor type-1B; BMP type-1B receptor; BMPR-1B; EC=2.7.11.30; AltName: CD_antigen=CDw293; Precursor;)
genome : 95,679,128 - 96,079,601 (400,474)
query : 1 - 5,560 (5,560/5,560)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.30
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 10, cyto 8, nucl 7, plas 3, E.R. 2, pero 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024604)
HIX0024604
HIT000222123
(
U89326
)
Representative transcript
(Bone morphogenetic protein receptor type-1B; BMP type-1B receptor; BMPR-1B; EC=2.7.11.30; AltName: CD_antigen=CDw293; Precursor;)
genome : 95,679,128 - 96,076,076 (396,949)
query : 1 - 2,032 (2,032/2,032)
13 exons
identity = 0.995
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.989)3'
coverage = 1.000
EC number :
EC 2.7.11.30
InterPro :
IPR000333 : Ser/Thr protein kinase, TGFB receptor
IPR000472 : TGF-beta family type I/II receptor, extracellular C-terminal domain
IPR003605 : TGF beta receptor, GS motif
IPR008271 : Serine/threonine-protein kinase, active site
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0004675 : Molecular Function : transmembrane receptor protein serine/threonine kinase activity
0004702 : Molecular Function : receptor signaling protein serine/threonine kinase activity
0005024 : Molecular Function : transforming growth factor beta-activated receptor activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
0007178 : Biological Process : transmembrane receptor protein serine/threonine kinase signaling pathway
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 10, cyto 8, nucl 7, plas 3, E.R. 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024604)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : BC092609
Bos
sp. (Cow) : BC134547
Tetraodon
sp. (Tetraodon) : CR705284
Gallus
sp. (Chicken) : D13432
Danio
sp. (Zebrafish) : ENSDART00000043930
Monodelphis
sp. (Opossum) : ENSMODT00000024471
Oryzias
sp. (Medaka) : ENSORLT00000007004
Pongo
sp. (Orangutan) : ENSPPYT00000017359
Pan
sp. (Chimpanzee) : ENSPTRT00000030320
Tetraodon
sp. (Tetraodon) : GSTENT00017232001
Canis
sp. (Dog) : NM_001145151
Takifugu
sp. (Fugu) : SINFRUT00000141794
Macaca
sp. (Macaque) : XM_001103874
Equus
sp. (Horse) : XM_001497486
Mus
sp. (Mouse) : Z23143
HIX0024604
HIT000263947
(
BC069796
)
(Bone morphogenetic protein receptor type-1B; BMP type-1B receptor; BMPR-1B; EC=2.7.11.30; AltName: CD_antigen=CDw293; Precursor;)
genome : 95,796,981 - 96,076,040 (279,060)
query : 4 - 1,910 (1,907/1,910)
12 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.991)3'
coverage = 0.998
EC number :
EC 2.7.11.30
InterPro :
IPR000333 : Ser/Thr protein kinase, TGFB receptor
IPR000472 : TGF-beta family type I/II receptor, extracellular C-terminal domain
IPR003605 : TGF beta receptor, GS motif
IPR008271 : Serine/threonine-protein kinase, active site
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0004675 : Molecular Function : transmembrane receptor protein serine/threonine kinase activity
0004702 : Molecular Function : receptor signaling protein serine/threonine kinase activity
0005024 : Molecular Function : transforming growth factor beta-activated receptor activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
0007178 : Biological Process : transmembrane receptor protein serine/threonine kinase signaling pathway
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 10, cyto 8, nucl 7, plas 3, E.R. 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024604)
HIX0024604
HIT000263954
(
BC069803
)
(Bone morphogenetic protein receptor type-1B; BMP type-1B receptor; BMPR-1B; EC=2.7.11.30; AltName: CD_antigen=CDw293; Precursor;)
genome : 95,796,981 - 96,076,040 (279,060)
query : 4 - 1,910 (1,907/1,910)
12 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.991)3'
coverage = 0.998
EC number :
EC 2.7.11.30
InterPro :
IPR000333 : Ser/Thr protein kinase, TGFB receptor
IPR000472 : TGF-beta family type I/II receptor, extracellular C-terminal domain
IPR003605 : TGF beta receptor, GS motif
IPR008271 : Serine/threonine-protein kinase, active site
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0004675 : Molecular Function : transmembrane receptor protein serine/threonine kinase activity
0004702 : Molecular Function : receptor signaling protein serine/threonine kinase activity
0005024 : Molecular Function : transforming growth factor beta-activated receptor activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
0007178 : Biological Process : transmembrane receptor protein serine/threonine kinase signaling pathway
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 10, cyto 8, nucl 7, plas 3, E.R. 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024604)
HIX0024604
HIT000606431 (
ENST00000506363
)
(Bone morphogenetic protein receptor type-1B; BMP type-1B receptor; BMPR-1B; EC=2.7.11.30; AltName: CD_antigen=CDw293; Precursor;)
genome : 95,916,947 - 96,044,986 (128,040)
query : 1 - 731 (731/731)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.30
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 3, mito 3, cyto_mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024604)
HIX0024604
HIT000723865 (
NM_001256792
)
(Bone morphogenetic protein receptor type-1B; BMP type-1B receptor; BMPR-1B; EC=2.7.11.30; AltName: CD_antigen=CDw293; Precursor;)
genome : 95,917,383 - 96,079,601 (162,219)
query : 1 - 5,456 (5,456/5,456)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.30
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 10, cyto 8, nucl 7, plas 3, E.R. 2, pero 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024604)
HIX0024604
HIT000432508
(
AK313642
)
(Bone morphogenetic protein receptor type-1B; BMP type-1B receptor; BMPR-1B; EC=2.7.11.30; AltName: CD_antigen=CDw293; Precursor;)
genome : 95,917,383 - 96,075,824 (158,442)
query : 1 - 1,679 (1,679/1,679)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.30
InterPro :
IPR000333 : Ser/Thr protein kinase, TGFB receptor
IPR000472 : TGF-beta family type I/II receptor, extracellular C-terminal domain
IPR003605 : TGF beta receptor, GS motif
IPR008271 : Serine/threonine-protein kinase, active site
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0004675 : Molecular Function : transmembrane receptor protein serine/threonine kinase activity
0004702 : Molecular Function : receptor signaling protein serine/threonine kinase activity
0005024 : Molecular Function : transforming growth factor beta-activated receptor activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
0007178 : Biological Process : transmembrane receptor protein serine/threonine kinase signaling pathway
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 10, cyto 8, nucl 7, plas 3, E.R. 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024604)
HIX0024604
HIT000611981 (
ENST00000512312
)
(Bone morphogenetic protein receptor type-1B; BMP type-1B receptor; BMPR-1B; EC=2.7.11.30; AltName: CD_antigen=CDw293; Precursor;)
genome : 95,917,383 - 96,075,824 (158,442)
query : 1 - 1,679 (1,679/1,679)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.30
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 10, cyto 8, nucl 7, plas 3, E.R. 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024604)
HIX0024604
HIT000723866 (
NM_001256793
)
(Bone morphogenetic protein receptor type-1B; BMP type-1B receptor; BMPR-1B; EC=2.7.11.30; AltName: CD_antigen=CDw293; Precursor;)
genome : 95,972,830 - 96,079,601 (106,772)
query : 1 - 5,397 (5,397/5,397)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.30
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, E.R. 5.5, pero 4.5, E.R._mito 4.33333,
plas 4, nucl 4, mito_pero 3.83333
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024604)
HIX0024604
HIT000494554
(
AK299930
)
(Bone morphogenetic protein receptor type-1B; BMP type-1B receptor; BMPR-1B; EC=2.7.11.30; AltName: CD_antigen=CDw293; Precursor;)
genome : 95,972,830 - 96,075,968 (103,139)
query : 1 - 1,764 (1,764/1,764)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.30
InterPro :
IPR000333 : Ser/Thr protein kinase, TGFB receptor
IPR000472 : TGF-beta family type I/II receptor, extracellular C-terminal domain
IPR003605 : TGF beta receptor, GS motif
IPR008271 : Serine/threonine-protein kinase, active site
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0004675 : Molecular Function : transmembrane receptor protein serine/threonine kinase activity
0004702 : Molecular Function : receptor signaling protein serine/threonine kinase activity
0005024 : Molecular Function : transforming growth factor beta-activated receptor activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
0007178 : Biological Process : transmembrane receptor protein serine/threonine kinase signaling pathway
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, E.R. 5.5, pero 4.5, E.R._mito 4.33333,
plas 4, nucl 4, mito_pero 3.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024604)
HIX0024604
HIT000538824 (
ENST00000440890
)
(Bone morphogenetic protein receptor type-1B; BMP type-1B receptor; BMPR-1B; EC=2.7.11.30; AltName: CD_antigen=CDw293; Precursor;)
genome : 95,972,830 - 96,075,968 (103,139)
query : 1 - 1,764 (1,764/1,764)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.30
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, E.R. 5.5, pero 4.5, E.R._mito 4.33333,
plas 4, nucl 4, mito_pero 3.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024604)
HIX0024604
HIT000609400 (
ENST00000509540
)
(Bone morphogenetic protein receptor type-1B; BMP type-1B receptor; BMPR-1B; EC=2.7.11.30; AltName: CD_antigen=CDw293; Precursor;)
genome : 95,972,830 - 96,075,968 (103,139)
query : 1 - 1,764 (1,764/1,764)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.30
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, E.R. 5.5, pero 4.5, E.R._mito 4.33333,
plas 4, nucl 4, mito_pero 3.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024604)
HIX0024604
HIT000603017 (
ENST00000502683
)
(Bone morphogenetic protein receptor type-1B; BMP type-1B receptor; BMPR-1B; EC=2.7.11.30; AltName: CD_antigen=CDw293; Precursor;)
genome : 96,012,585 - 96,036,940 (24,356)
query : 1 - 567 (567/567)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.30
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024604)
HIX0024604
HIT000723867 (
NM_001256794
)
(Bone morphogenetic protein receptor type-1B; BMP type-1B receptor; BMPR-1B; EC=2.7.11.30; AltName: CD_antigen=CDw293; Precursor;)
genome : 96,012,642 - 96,079,601 (66,960)
query : 1 - 5,440 (5,440/5,440)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.30
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 10, cyto 8, nucl 7, plas 3, E.R. 2, pero 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024604)
HIX0024604
HIT000109354 (
ENST00000264568
)
(Bone morphogenetic protein receptor type-1B; BMP type-1B receptor; BMPR-1B; EC=2.7.11.30; AltName: CD_antigen=CDw293; Precursor;)
genome : 96,012,642 - 96,075,968 (63,327)
query : 1 - 1,807 (1,807/1,807)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.30
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 10, cyto 8, nucl 7, plas 3, E.R. 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024604)
HIX0024604
HIT000425805
(
AK293008
)
(Bone morphogenetic protein receptor type-1B; BMP type-1B receptor; BMPR-1B; EC=2.7.11.30; AltName: CD_antigen=CDw293; Precursor;)
genome : 96,012,642 - 96,075,968 (63,327)
query : 1 - 1,807 (1,807/1,807)
11 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.992;0.993)3'
coverage = 1.000
EC number :
EC 2.7.11.30
InterPro :
IPR000333 : Ser/Thr protein kinase, TGFB receptor
IPR000472 : TGF-beta family type I/II receptor, extracellular C-terminal domain
IPR003605 : TGF beta receptor, GS motif
IPR008271 : Serine/threonine-protein kinase, active site
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0004675 : Molecular Function : transmembrane receptor protein serine/threonine kinase activity
0004702 : Molecular Function : receptor signaling protein serine/threonine kinase activity
0005024 : Molecular Function : transforming growth factor beta-activated receptor activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
0007178 : Biological Process : transmembrane receptor protein serine/threonine kinase signaling pathway
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 10, cyto 8, nucl 7, plas 3, E.R. 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024604)
HIX0024604
HIT000053249
(
BC047773
)
(Bone morphogenetic protein receptor type-1B; BMP type-1B receptor; BMPR-1B; EC=2.7.11.30; AltName: CD_antigen=CDw293; Precursor;)
genome : 96,025,506 - 96,076,167 (50,662)
query : 1 - 1,922 (1,922/1,945)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.30
InterPro :
IPR000333 : Ser/Thr protein kinase, TGFB receptor
IPR000472 : TGF-beta family type I/II receptor, extracellular C-terminal domain
IPR003605 : TGF beta receptor, GS motif
IPR008271 : Serine/threonine-protein kinase, active site
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0004675 : Molecular Function : transmembrane receptor protein serine/threonine kinase activity
0004702 : Molecular Function : receptor signaling protein serine/threonine kinase activity
0005024 : Molecular Function : transforming growth factor beta-activated receptor activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
0007178 : Biological Process : transmembrane receptor protein serine/threonine kinase signaling pathway
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 10, cyto 8, nucl 7, plas 3, E.R. 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024604)
HIX0024604
HIT000478328 (
ENST00000394931
)
(Bone morphogenetic protein receptor type-1B; BMP type-1B receptor; BMPR-1B; EC=2.7.11.30; AltName: CD_antigen=CDw293; Precursor;)
genome : 96,025,506 - 96,076,167 (50,662)
query : 1 - 1,922 (1,922/1,922)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.30
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 10, cyto 8, nucl 7, plas 3, E.R. 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024604)
HIX0024604
HIT000102047
(
D89675
)
(Bone morphogenetic protein receptor type-1B; BMP type-1B receptor; BMPR-1B; EC=2.7.11.30; AltName: CD_antigen=CDw293; Precursor;)
genome : 96,025,558 - 96,075,872 (50,315)
query : 1 - 1,575 (1,575/1,575)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.994)3'
coverage = 1.000
EC number :
EC 2.7.11.30
InterPro :
IPR000333 : Ser/Thr protein kinase, TGFB receptor
IPR000472 : TGF-beta family type I/II receptor, extracellular C-terminal domain
IPR003605 : TGF beta receptor, GS motif
IPR008271 : Serine/threonine-protein kinase, active site
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0004675 : Molecular Function : transmembrane receptor protein serine/threonine kinase activity
0004702 : Molecular Function : receptor signaling protein serine/threonine kinase activity
0005024 : Molecular Function : transforming growth factor beta-activated receptor activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
0007178 : Biological Process : transmembrane receptor protein serine/threonine kinase signaling pathway
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 10, cyto 8, nucl 7, plas 3, E.R. 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024604)
HIX0024552
HIT000055123
(
BX538341
)
(Conserved hypothetical protein.)
genome : 96,083,660 - 96,088,750 (5,091)
query : 8 - 5,098 (5,091/5,116)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, mito 3, E.R._mito 2.33333, mito_pero 2.33333,
plas 2, cyto 2, cyto_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024552)
HIX0024552
HIT000200527 (
NM_003728
)
(Immunoglobulin I-set domain containing protein.)
genome : 96,083,655 - 96,470,361 (386,707)
query : 1 - 9,879 (9,879/9,879)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.995;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024552)
HIX0024552
HIT000551238 (
ENST00000453304
)
(Immunoglobulin I-set domain containing protein.)
genome : 96,083,655 - 96,470,357 (386,703)
query : 1 - 9,875 (9,875/9,875)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024552)
HIX0024552
HIT000005761
(
AK022487
)
(Conserved hypothetical protein.)
genome : 96,083,661 - 96,086,402 (2,742)
query : 1 - 2,742 (2,742/2,742)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, mito 3, E.R._mito 2.33333, mito_pero 2.33333,
plas 2, cyto 2, cyto_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024552)
HIX0024552
HIT000064666
(
AF055634
)
Representative transcript
(Netrin receptor UNC5C; Protein unc-5 homolog 3; Protein unc-5 homolog C; Precursor;)
genome : 96,089,689 - 96,470,162 (380,474)
query : 1 - 3,646 (3,646/3,646)
16 exons
identity = 0.998
3'(0.998;1.000;1.000;0.993;0.991;0.994;1.000;
0.997;0.995;1.000;1.000;1.000;1.000;1.000;
0.995;1.000)5'
coverage = 1.000
InterPro :
IPR000488 : Death domain
IPR000884 : Thrombospondin, type 1 repeat
IPR000906 : ZU5 domain
IPR003598 : Immunoglobulin subtype 2
IPR011029 : Death-like domain
IPR013098 : Immunoglobulin I-set
GO :
0005515 : Molecular Function : protein binding
0007165 : Biological Process : signal transduction
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 26, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024552)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AB118026
Mus
sp. (Mouse) : AK142974
Gallus
sp. (Chicken) : AY187310
Bos
sp. (Cow) : BC149459
Oryzias
sp. (Medaka) : ENSORLT00000007060
Oryzias
sp. (Medaka) : ENSORLT00000009799
Pongo
sp. (Orangutan) : ENSPPYT00000017360
Tetraodon
sp. (Tetraodon) : GSTENT00017230001
Tetraodon
sp. (Tetraodon) : GSTENT00029390001
Takifugu
sp. (Fugu) : SINFRUT00000183102
Pan
sp. (Chimpanzee) : XM_001164941
Monodelphis
sp. (Opossum) : XM_001365174
Equus
sp. (Horse) : XM_001497540
Danio
sp. (Zebrafish) : XM_001920820
Canis
sp. (Dog) : XM_856786
Macaca
sp. (Macaque) : XR_012958
HIX0024552
HIT000423297
(
AK290500
)
(Netrin receptor UNC5C; Protein unc-5 homolog 3; Protein unc-5 homolog C; Precursor;)
genome : 96,090,041 - 96,470,172 (380,132)
query : 1 - 3,304 (3,304/3,304)
16 exons
identity = 0.998
3'(1.000;0.994;1.000;0.993;1.000;0.994;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.991;0.997)5'
coverage = 1.000
InterPro :
IPR000488 : Death domain
IPR000884 : Thrombospondin, type 1 repeat
IPR000906 : ZU5 domain
IPR003598 : Immunoglobulin subtype 2
IPR011029 : Death-like domain
IPR013098 : Immunoglobulin I-set
GO :
0005515 : Molecular Function : protein binding
0007165 : Biological Process : signal transduction
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024552)
HIX0024552
HIT000427287
(
AK308421
)
(Immunoglobulin I-set domain containing protein.)
genome : 96,106,306 - 96,470,123 (363,818)
query : 2 - 2,350 (2,349/2,350)
14 exons
identity = 0.998
3'(0.976;0.996;1.000;1.000;0.997;1.000;1.000;
1.000;1.000;1.000;0.990;1.000;0.995;1.000)5'
coverage = 1.000
InterPro :
IPR000884 : Thrombospondin, type 1 repeat
IPR000906 : ZU5 domain
IPR003598 : Immunoglobulin subtype 2
IPR013098 : Immunoglobulin I-set
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024552)
HIX0024552
HIT000613339 (
ENST00000513796
)
(Immunoglobulin I-set domain containing protein.)
genome : 96,106,306 - 96,470,123 (363,818)
query : 1 - 2,350 (2,350/2,350)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024552)
HIX0120533
HIT000455909
(
DQ589378
)
Representative transcript
(Non-protein coding transcript.)
genome : 96,109,300 - 96,109,330 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0120533)
HIX0024552
HIT000052525
(
BC041156
)
(Netrin receptor UNC5C; Protein unc-5 homolog 3; Protein unc-5 homolog C; Precursor;)
genome : 96,137,195 - 96,470,357 (333,163)
query : 1 - 2,219 (2,219/2,270)
11 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.994;
1.000;1.000;0.991;1.000)5'
coverage = 1.000
InterPro :
IPR000884 : Thrombospondin, type 1 repeat
IPR000906 : ZU5 domain
IPR003598 : Immunoglobulin subtype 2
IPR013098 : Immunoglobulin I-set
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024552)
HIX0024552
HIT000606795 (
ENST00000506749
)
(Immunoglobulin I-set domain containing protein.)
genome : 96,137,194 - 96,470,357 (333,164)
query : 1 - 2,220 (2,220/2,220)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024552)
HIX0024552
HIT000093546
(
BC034747
)
(Netrin receptor UNC5C; Protein unc-5 homolog 3; Protein unc-5 homolog C; Precursor;)
genome : 96,169,097 - 96,470,351 (301,255)
query : 1 - 1,789 (1,789/1,843)
6 exons
identity = 0.998
3'(0.999;1.000;1.000;1.000;0.991;1.000)5'
coverage = 1.000
InterPro :
IPR003598 : Immunoglobulin subtype 2
IPR013098 : Immunoglobulin I-set
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 3, cyto 1, mito 1, pero 1, golg 1,
cyto_mito 1, mito_pero 1, cyto_pero 1, cyto_golg 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024552)
HIX0024552
HIT000605125 (
ENST00000504962
)
(Immunoglobulin I-set domain containing protein.)
genome : 96,169,097 - 96,470,351 (301,255)
query : 1 - 1,789 (1,789/1,789)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 3, cyto 1, mito 1, pero 1, golg 1,
cyto_mito 1, mito_pero 1, cyto_pero 1, cyto_golg 1
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024552)
HIX0031728
HIT000096827
(
BC041657
)
Representative transcript
(Hypothetical protein.)
genome : 96,470,280 - 96,473,371 (3,092)
query : 1 - 3,092 (3,092/3,152)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 10, cyto 6, mito_nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031728)
HIX0205308
HIT000580143 (
ENST00000475925
)
(Conserved hypothetical protein.)
genome : 96,566,103 - 96,566,444 (342)
query : 1 - 342 (342/342)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 9, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205308)
HIX0031443
HIT000114111 (
ENST00000295266
)
(Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial; EC=1.2.4.1; PDHE1-A type II; Precursor;)
genome : 96,761,239 - 96,762,625 (1,387)
query : 1 - 1,387 (1,387/1,387)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 1.2.4.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00020 : Citrate cycle (TCA cycle) (22)
00290 : Valine, leucine and isoleucine biosynthesis (15)
00620 : Pyruvate metabolism (62)
00650 : Butanoate metabolism (47)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031443)
HIX0031443
HIT000202085 (
NM_005390
)
(Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial; EC=1.2.4.1; PDHE1-A type II; Precursor;)
genome : 96,761,239 - 96,762,625 (1,387)
query : 1 - 1,387 (1,387/1,387)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 1.2.4.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00020 : Citrate cycle (TCA cycle) (22)
00290 : Valine, leucine and isoleucine biosynthesis (15)
00620 : Pyruvate metabolism (62)
00650 : Butanoate metabolism (47)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, cyto 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031443)
HIX0031443
HIT000041106
(
BC030697
)
Representative transcript
(Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial; EC=1.2.4.1; PDHE1-A type II; Precursor;)
genome : 96,761,243 - 96,762,625 (1,383)
query : 1 - 1,383 (1,383/1,398)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
EC number :
EC 1.2.4.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00020 : Citrate cycle (TCA cycle) (22)
00290 : Valine, leucine and isoleucine biosynthesis (15)
00620 : Pyruvate metabolism (62)
00650 : Butanoate metabolism (47)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR001017 : Dehydrogenase, E1 component
IPR017597 : Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y
IPR029061 : Thiamin diphosphate-binding fold
GO :
0004739 : Molecular Function : pyruvate dehydrogenase (acetyl-transferring) activity
0006096 : Biological Process : glycolytic process
0008152 : Biological Process : metabolic process
0016624 : Molecular Function : oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
0043231 : Cellular Component : intracellular membrane-bounded organelle
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031443)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : BC076185
Bos
sp. (Cow) : BC111209
Pongo
sp. (Orangutan) : ENSPPYT00000017361
Tetraodon
sp. (Tetraodon) : GSTENT00007919001
Mus
sp. (Mouse) : M76728
Takifugu
sp. (Fugu) : SINFRUT00000169163
Macaca
sp. (Macaque) : XM_001097880
Equus
sp. (Horse) : XM_001497670
Pan
sp. (Chimpanzee) : XM_526637
Rattus
sp. (Rat) : Z18878
HIX0031443
HIT000335061
(
BC094760
)
(Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial; EC=1.2.4.1; PDHE1-A type II; Precursor;)
genome : 96,761,244 - 96,762,573 (1,330)
query : 1 - 1,330 (1,330/1,344)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
EC number :
EC 1.2.4.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00020 : Citrate cycle (TCA cycle) (22)
00290 : Valine, leucine and isoleucine biosynthesis (15)
00620 : Pyruvate metabolism (62)
00650 : Butanoate metabolism (47)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR001017 : Dehydrogenase, E1 component
IPR017597 : Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y
IPR029061 : Thiamin diphosphate-binding fold
GO :
0004739 : Molecular Function : pyruvate dehydrogenase (acetyl-transferring) activity
0006096 : Biological Process : glycolytic process
0008152 : Biological Process : metabolic process
0016624 : Molecular Function : oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
0043231 : Cellular Component : intracellular membrane-bounded organelle
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031443)
HIX0031443
HIT000262373
(
BC066953
)
(Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial; EC=1.2.4.1; PDHE1-A type II; Precursor;)
genome : 96,761,257 - 96,762,619 (1,363)
query : 1 - 1,363 (1,363/1,391)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
EC number :
EC 1.2.4.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00020 : Citrate cycle (TCA cycle) (22)
00290 : Valine, leucine and isoleucine biosynthesis (15)
00620 : Pyruvate metabolism (62)
00650 : Butanoate metabolism (47)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR001017 : Dehydrogenase, E1 component
IPR017597 : Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y
IPR029061 : Thiamin diphosphate-binding fold
GO :
0004739 : Molecular Function : pyruvate dehydrogenase (acetyl-transferring) activity
0006096 : Biological Process : glycolytic process
0008152 : Biological Process : metabolic process
0016624 : Molecular Function : oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
0043231 : Cellular Component : intracellular membrane-bounded organelle
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031443)
HIX0031443
HIT000387975
(
BC119656
)
(Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial; EC=1.2.4.1; PDHE1-A type II; Precursor;)
genome : 96,761,271 - 96,762,523 (1,253)
query : 1 - 1,253 (1,253/1,253)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 1.2.4.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00020 : Citrate cycle (TCA cycle) (22)
00290 : Valine, leucine and isoleucine biosynthesis (15)
00620 : Pyruvate metabolism (62)
00650 : Butanoate metabolism (47)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR001017 : Dehydrogenase, E1 component
IPR017597 : Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y
IPR029061 : Thiamin diphosphate-binding fold
GO :
0004739 : Molecular Function : pyruvate dehydrogenase (acetyl-transferring) activity
0006096 : Biological Process : glycolytic process
0008152 : Biological Process : metabolic process
0016624 : Molecular Function : oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
0043231 : Cellular Component : intracellular membrane-bounded organelle
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031443)
HIX0031443
HIT000387976
(
BC119657
)
(Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial; EC=1.2.4.1; PDHE1-A type II; Precursor;)
genome : 96,761,271 - 96,762,523 (1,253)
query : 1 - 1,253 (1,253/1,253)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 1.2.4.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00020 : Citrate cycle (TCA cycle) (22)
00290 : Valine, leucine and isoleucine biosynthesis (15)
00620 : Pyruvate metabolism (62)
00650 : Butanoate metabolism (47)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR001017 : Dehydrogenase, E1 component
IPR017597 : Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y
IPR029061 : Thiamin diphosphate-binding fold
GO :
0004739 : Molecular Function : pyruvate dehydrogenase (acetyl-transferring) activity
0006096 : Biological Process : glycolytic process
0008152 : Biological Process : metabolic process
0016624 : Molecular Function : oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
0043231 : Cellular Component : intracellular membrane-bounded organelle
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031443)
HIX0031443
HIT000389265
(
BC127637
)
(Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial; EC=1.2.4.1; PDHE1-A type II; Precursor;)
genome : 96,761,272 - 96,762,521 (1,250)
query : 2 - 1,251 (1,250/1,251)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.999
EC number :
EC 1.2.4.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00020 : Citrate cycle (TCA cycle) (22)
00290 : Valine, leucine and isoleucine biosynthesis (15)
00620 : Pyruvate metabolism (62)
00650 : Butanoate metabolism (47)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR001017 : Dehydrogenase, E1 component
IPR017597 : Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y
IPR029061 : Thiamin diphosphate-binding fold
GO :
0004739 : Molecular Function : pyruvate dehydrogenase (acetyl-transferring) activity
0006096 : Biological Process : glycolytic process
0008152 : Biological Process : metabolic process
0016624 : Molecular Function : oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
0043231 : Cellular Component : intracellular membrane-bounded organelle
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031443)
HIX0031443
HIT000389266
(
BC127638
)
(Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial; EC=1.2.4.1; PDHE1-A type II; Precursor;)
genome : 96,761,272 - 96,762,521 (1,250)
query : 1 - 1,250 (1,250/1,250)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 1.2.4.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00020 : Citrate cycle (TCA cycle) (22)
00290 : Valine, leucine and isoleucine biosynthesis (15)
00620 : Pyruvate metabolism (62)
00650 : Butanoate metabolism (47)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR001017 : Dehydrogenase, E1 component
IPR017597 : Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y
IPR029061 : Thiamin diphosphate-binding fold
GO :
0004739 : Molecular Function : pyruvate dehydrogenase (acetyl-transferring) activity
0006096 : Biological Process : glycolytic process
0008152 : Biological Process : metabolic process
0016624 : Molecular Function : oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
0043231 : Cellular Component : intracellular membrane-bounded organelle
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031443)
HIX0031443
HIT000432738
(
AK313872
)
(Pyruvate dehydrogenase E1 component subunit alpha, testis-specific form, mitochondrial; EC=1.2.4.1; PDHE1-A type II; Precursor;)
genome : 96,761,279 - 96,762,468 (1,190)
query : 1 - 1,190 (1,190/1,190)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 1.2.4.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00020 : Citrate cycle (TCA cycle) (22)
00290 : Valine, leucine and isoleucine biosynthesis (15)
00620 : Pyruvate metabolism (62)
00650 : Butanoate metabolism (47)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR001017 : Dehydrogenase, E1 component
IPR017597 : Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y
IPR029061 : Thiamin diphosphate-binding fold
GO :
0004739 : Molecular Function : pyruvate dehydrogenase (acetyl-transferring) activity
0006096 : Biological Process : glycolytic process
0008152 : Biological Process : metabolic process
0016624 : Molecular Function : oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
0043231 : Cellular Component : intracellular membrane-bounded organelle
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031443)
HIX0031443
HIT000438241
(
DQ571710
)
(Non-protein coding transcript.)
genome : 96,762,059 - 96,762,087 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031443)
HIX0031929
HIT000325804
(
Y13870
)
Representative transcript
(Conserved hypothetical protein.)
genome : 96,806,706 - 96,809,282 (2,577)
query : 2 - 2,578 (2,577/2,627)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 0.981
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 7.83333, nucl 5.5, cyto 5,
cyto_pero 4.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031929)
HIX0206085
HIT000615275 (
ENST00000515870
)
(FERM, N-terminal domain containing protein.)
genome : 97,133,430 - 97,134,251 (822)
query : 1 - 822 (822/822)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23.5, mito_pero 12.5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206085)
HIX0031774
HIT000612966 (
ENST00000513393
)
(Conserved hypothetical protein.)
genome : 97,231,852 - 97,285,603 (53,752)
query : 1 - 1,687 (1,687/1,687)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11, mito 10, cyto_nucl 8.5, extr 5, mito_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031774)
HIX0031774
HIT000621475 (
ENST00000522173
)
(Hypothetical protein.)
genome : 97,231,883 - 97,740,015 (508,133)
query : 1 - 799 (799/799)
4 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031774)
HIX0120184
HIT000346367 (
ENST00000364770
)
(Conserved hypothetical protein.)
genome : 97,269,889 - 97,270,189 (301)
query : 1 - 301 (301/301)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10.1667, extr 10, nucl 10, cyto 8,
cyto_pero 5.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0120184)
AC105395.1
96000001-96139681 F +
NCBI
AC098584.2
96139682-96296887 F +
NCBI
AC097656.5
96296888-96376321 F +
NCBI
AC106881.9
96376322-96525210 F +
NCBI
AC093832.2
96525211-96712442 F +
NCBI
AC093828.3
96712443-96854514 F +
NCBI
AC095054.3
96854515-96905178 F +
NCBI
AC093721.3
96905179-97031326 F +
NCBI
AC096661.1
97031327-97152987 F +
NCBI
AC093776.3
97152988-97310924 F +
NCBI
AC108464.5
97310925-97342322 F +
NCBI
AC104816.4
97342323-97509565 F +
NCBI
AC113613.4
97509566-97594133 F +
NCBI
AC079616.4
97594134-97600000 F +
NCBI