bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0004332
HIT000612345 (
ENST00000512716
)
(Ras-GEF domain-containing family member 1B-A;)
genome : 82,380,633 - 82,965,397 (584,765)
query : 1 - 516 (516/516)
5 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 7, cyto 4, mito 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004332)
HIX0004332
HIT000613575 (
ENST00000514050
)
(Hypothetical short protein.)
genome : 82,523,951 - 82,965,397 (441,447)
query : 1 - 472 (472/472)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
This sequence is too short.
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004332)
HIX0004332
HIT000612008 (
ENST00000512343
)
(Ras-GEF domain-containing family member 1B-A;)
genome : 82,524,025 - 82,965,397 (441,373)
query : 1 - 498 (498/498)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 4, nucl 3, cyto_mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004332)
HIX0004332
HIT000610535 (
ENST00000510780
)
(Ras-GEF domain-containing family member 1B-A;)
genome : 82,524,028 - 82,965,397 (441,370)
query : 1 - 539 (539/539)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, mito 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004332)
HIX0004332
HIT000608230 (
ENST00000508294
)
(Ras-GEF domain-containing family member 1B-A;)
genome : 82,556,977 - 82,965,397 (408,421)
query : 1 - 504 (504/504)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 6, cyto 4, mito_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004332)
HIX0206031
HIT000614303 (
ENST00000514835
)
(Cytochrome b/b6, N-terminal domain containing protein.)
genome : 82,654,539 - 82,655,361 (823)
query : 1 - 823 (823/823)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206031)
HIX0205644
HIT000607607 (
ENST00000507622
)
(Cytochrome c oxidase, subunit Vb family protein.)
genome : 82,841,148 - 82,841,540 (393)
query : 1 - 393 (393/393)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, extr 7, cyto 7, E.R._mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205644)
HIX0206111
HIT000616356 (
ENST00000516953
)
(Non-protein coding transcript.)
genome : 82,849,466 - 82,849,592 (127)
query : 1 - 127 (127/127)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206111)
HIX0205926
HIT000612537 (
ENST00000512920
)
(Nucleoplasmin core domain containing protein.)
genome : 82,931,818 - 82,934,248 (2,431)
query : 1 - 831 (831/831)
3 exons
identity = 0.999
3'(1.000;0.992;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 7.5, extr_plas 7.5, cyto_nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205926)
HIX0205247
HIT000439820_11
(
DQ573289
)
Representative transcript
(Non-protein coding transcript.)
genome : 82,998,756 - 82,998,785 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205247)
HIX0205887
HIT000611897 (
ENST00000512222
)
(Nuclear factor hnRNPA1 family protein.)
genome : 83,049,688 - 83,050,809 (1,122)
query : 1 - 1,122 (1,122/1,122)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18, mito 9, extr_plas 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205887)
HIX0120193
HIT000347201 (
ENST00000365615
)
(Hypothetical short protein.)
genome : 83,095,700 - 83,095,806 (107)
query : 1 - 107 (107/107)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0120193)
HIX0205504
HIT000605157 (
ENST00000504996
)
(Bridging integrator 2 family protein.)
genome : 83,196,224 - 83,197,753 (1,530)
query : 1 - 1,530 (1,530/1,530)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 11, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205504)
HIX0200634
HIT000119930 (
ENST00000313899
)
(Heterogeneous nuclear ribonucleoprotein D0; hnRNP D0; AU-rich element RNA-binding protein 1;)
genome : 83,273,651 - 83,295,109 (21,459)
query : 1 - 3,033 (3,033/3,033)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200634)
HIX0200634
HIT000199059 (
NM_002138
)
(Heterogeneous nuclear ribonucleoprotein C; hnRNP C; hnRNP core protein C; Fragment;)
genome : 83,274,467 - 83,295,149 (20,683)
query : 1 - 2,110 (2,110/2,110)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200634)
HIX0200634
HIT000210144 (
NM_031369
)
(Heterogeneous nuclear ribonucleoprotein D0 isoform b.)
genome : 83,274,467 - 83,295,149 (20,683)
query : 1 - 2,200 (2,200/2,200)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200634)
HIX0200634
HIT000210145 (
NM_031370
)
(Heterogeneous nuclear ribonucleoprotein D0; hnRNP D0; AU-rich element RNA-binding protein 1;)
genome : 83,274,467 - 83,295,149 (20,683)
query : 1 - 2,257 (2,257/2,257)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200634)
HIX0200634
HIT000315771 (
NM_001003810
)
(Heterogeneous nuclear ribonucleoprotein C; hnRNP C; hnRNP core protein C; Fragment;)
genome : 83,274,467 - 83,295,149 (20,683)
query : 1 - 2,053 (2,053/2,053)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200634)
HIX0200634
HIT000063485
(
AF039575
)
(Heterogeneous nuclear ribonucleoprotein C; hnRNP C; hnRNP core protein C; Fragment;)
genome : 83,274,494 - 83,294,807 (20,314)
query : 1 - 1,741 (1,741/1,741)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR012956 : CARG-binding factor, N-terminal
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200634)
HIX0200634
HIT000040067
(
BC026015
)
(Heterogeneous nuclear ribonucleoprotein C; hnRNP C; hnRNP core protein C; Fragment;)
genome : 83,274,986 - 83,295,124 (20,139)
query : 1 - 1,566 (1,566/1,620)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR012956 : CARG-binding factor, N-terminal
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200634)
HIX0200634
HIT000039702
(
BC023977
)
(Heterogeneous nuclear ribonucleoprotein C; hnRNP C; hnRNP core protein C; Fragment;)
genome : 83,274,986 - 83,295,124 (20,139)
query : 1 - 1,566 (1,566/1,618)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR012956 : CARG-binding factor, N-terminal
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200634)
HIX0200634
HIT000027635
(
AL832723
)
(Heterogeneous nuclear ribonucleoprotein C; hnRNP C; hnRNP core protein C; Fragment;)
genome : 83,274,986 - 83,279,995 (5,010)
query : 1 - 4,593 (4,593/4,629)
2 exons
identity = 0.999
3'(0.999;0.999)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 9, mito 9, cyto_mito 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200634)
HIX0200634
HIT000030864
(
BC002401
)
(Heterogeneous nuclear ribonucleoprotein D0; hnRNP D0; AU-rich element RNA-binding protein 1;)
genome : 83,274,986 - 83,294,886 (19,901)
query : 10 - 1,484 (1,475/1,508)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.994
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR012956 : CARG-binding factor, N-terminal
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200634)
HIX0200634
HIT000308385 (
ENST00000353341
)
(Heterogeneous nuclear ribonucleoprotein C; hnRNP C; hnRNP core protein C; Fragment;)
genome : 83,274,982 - 83,295,139 (20,158)
query : 1 - 1,585 (1,585/1,585)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200634)
HIX0200634
HIT000613831 (
ENST00000514325
)
(Heterogeneous nuclear ribonucleoprotein C; hnRNP C; hnRNP core protein C; Fragment;)
genome : 83,274,982 - 83,279,995 (5,014)
query : 1 - 4,597 (4,597/4,597)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 9, mito 9, cyto_mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200634)
HIX0200634
HIT000308220 (
ENST00000352301
)
(Heterogeneous nuclear ribonucleoprotein D0 isoform b.)
genome : 83,274,987 - 83,295,136 (20,150)
query : 1 - 1,667 (1,667/1,667)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200634)
HIX0200634
HIT000101659
(
D55672
)
(Heterogeneous nuclear ribonucleoprotein C; hnRNP C; hnRNP core protein C; Fragment;)
genome : 83,274,987 - 83,295,119 (20,133)
query : 1 - 1,557 (1,557/1,557)
8 exons
identity = 0.997
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
0.994)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR012956 : CARG-binding factor, N-terminal
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200634)
HIX0200634
HIT000101661
(
D55674
)
Representative transcript
(Heterogeneous nuclear ribonucleoprotein D0; hnRNP D0; AU-rich element RNA-binding protein 1;)
genome : 83,274,987 - 83,295,098 (20,112)
query : 1 - 1,683 (1,683/1,683)
9 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR012956 : CARG-binding factor, N-terminal
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200634)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AB046615
Mus
sp. (Mouse) : BC011172
Danio
sp. (Zebrafish) : BC139674
Bos
sp. (Cow) : BC146038
Gallus
sp. (Chicken) : ENSGALT00000038011
Macaca
sp. (Macaque) : ENSMMUT00000019695
Oryzias
sp. (Medaka) : ENSORLT00000002283
Pongo
sp. (Orangutan) : ENSPPYT00000017297
Pan
sp. (Chimpanzee) : ENSPTRT00000030178
Takifugu
sp. (Fugu) : SINFRUT00000136506
Monodelphis
sp. (Opossum) : XM_001363968
Equus
sp. (Horse) : XM_001916274
Canis
sp. (Dog) : XM_852546
HIX0200634
HIT000642143 (
ENST00000543098
)
(Heterogeneous nuclear ribonucleoprotein A/B; hnRNP A/B; APOBEC1-binding protein 1; ABBP-1;)
genome : 83,274,987 - 83,294,831 (19,845)
query : 1 - 1,263 (1,263/1,263)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200634)
HIX0200634
HIT000101658
(
D55671
)
(Heterogeneous nuclear ribonucleoprotein D0 isoform b.)
genome : 83,274,987 - 83,294,625 (19,639)
query : 1 - 1,156 (1,156/1,156)
8 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200634)
HIX0200634
HIT000101660
(
D55673
)
(Heterogeneous nuclear ribonucleoprotein C; hnRNP C; hnRNP core protein C; Fragment;)
genome : 83,274,987 - 83,280,793 (5,807)
query : 18 - 1,108 (1,091/1,108)
7 exons
identity = 0.996
3'(0.997;0.972;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.985
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200634)
HIX0200634
HIT000614151 (
ENST00000514671
)
(Heterogeneous nuclear ribonucleoprotein C; hnRNP C; hnRNP core protein C; Fragment;)
genome : 83,274,987 - 83,280,792 (5,806)
query : 1 - 1,089 (1,089/1,089)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200634)
HIX0200634
HIT000196880
(
M94630
)
(Heterogeneous nuclear ribonucleoprotein D0 isoform d.)
genome : 83,275,124 - 83,294,767 (19,644)
query : 26 - 1,092 (1,067/1,154)
8 exons
identity = 0.992
3'(0.989;0.970;1.000;0.992;1.000;1.000;1.000;
0.982)5'
coverage = 0.925
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR012956 : CARG-binding factor, N-terminal
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200634)
HIX0200634
HIT000014443
(
AK057836
)
(Heterogeneous nuclear ribonucleoprotein D0; hnRNP D0; AU-rich element RNA-binding protein 1;)
genome : 83,275,141 - 83,295,109 (19,969)
query : 2 - 1,544 (1,543/1,544)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.999
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR012956 : CARG-binding factor, N-terminal
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200634)
HIX0200634
HIT000494773
(
AK300149
)
(Heterogeneous nuclear ribonucleoprotein D0; hnRNP D0; AU-rich element RNA-binding protein 1;)
genome : 83,275,228 - 83,295,137 (19,910)
query : 1 - 1,328 (1,328/1,328)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR012956 : CARG-binding factor, N-terminal
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200634)
HIX0200634
HIT000425504
(
AK292707
)
(Heterogeneous nuclear ribonucleoprotein D0 isoform b.)
genome : 83,275,908 - 83,295,144 (19,237)
query : 1 - 1,905 (1,905/1,905)
7 exons
identity = 0.998
3'(0.995;1.000;1.000;1.000;1.000;1.000;0.998)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR012956 : CARG-binding factor, N-terminal
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200634)
HIX0200634
HIT000608069 (
ENST00000508119
)
(Heterogeneous nuclear ribonucleoprotein C; hnRNP C; hnRNP core protein C; Fragment;)
genome : 83,276,000 - 83,278,545 (2,546)
query : 1 - 735 (735/735)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 9, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200634)
HIX0200634
HIT000498176
(
AK303552
)
(Heterogeneous nuclear ribonucleoprotein C; hnRNP C; hnRNP core protein C; Fragment;)
genome : 83,276,231 - 83,295,144 (18,914)
query : 1 - 1,412 (1,412/1,412)
6 exons
identity = 0.997
3'(0.991;0.993;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200634)
HIX0200634
HIT000640105 (
ENST00000541060
)
(Heterogeneous nuclear ribonucleoprotein C; hnRNP C; hnRNP core protein C; Fragment;)
genome : 83,276,231 - 83,295,144 (18,914)
query : 1 - 1,411 (1,411/1,411)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200634)
HIX0200634
HIT000613142 (
ENST00000513584
)
(Heterogeneous nuclear ribonucleoprotein C; hnRNP C; hnRNP core protein C; Fragment;)
genome : 83,276,402 - 83,295,144 (18,743)
query : 1 - 1,240 (1,240/1,240)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200634)
HIX0200634
HIT000609138 (
ENST00000509263
)
(Heterogeneous nuclear ribonucleoprotein D0; hnRNP D0; AU-rich element RNA-binding protein 1;)
genome : 83,277,707 - 83,294,303 (16,597)
query : 1 - 782 (782/782)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200634)
HIX0200634
HIT000607034 (
ENST00000507010
)
(Heterogeneous nuclear ribonucleoprotein D0; hnRNP D0; AU-rich element RNA-binding protein 1;)
genome : 83,278,556 - 83,295,297 (16,742)
query : 1 - 748 (748/748)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200634)
HIX0200634
HIT000614867 (
ENST00000515432
)
(Heterogeneous nuclear ribonucleoprotein D0 isoform d.)
genome : 83,279,810 - 83,295,656 (15,847)
query : 1 - 539 (539/545)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.989
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200634)
HIX0200634
HIT000604087 (
ENST00000503822
)
(Heterogeneous nuclear ribonucleoprotein D0; hnRNP D0; AU-rich element RNA-binding protein 1;)
genome : 83,279,911 - 83,295,314 (15,404)
query : 1 - 607 (607/607)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200634)
HIX0200634
HIT000608991 (
ENST00000509107
)
(Heterogeneous nuclear ribonucleoprotein D0; hnRNP D0; AU-rich element RNA-binding protein 1;)
genome : 83,280,669 - 83,295,138 (14,470)
query : 1 - 583 (583/583)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 13.5, extr 7, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200634)
HIX0183355
HIT000603508 (
ENST00000503202
)
(TAP42-like protein family protein.)
genome : 83,322,731 - 83,323,609 (879)
query : 1 - 879 (879/879)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 13, extr 7, nucl 3.5,
extr_plas 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0183355)
HIX0183355
pHIT000008465 ( pHIT000008465 )
Representative transcript
(Conserved hypothetical protein.)
genome : 83,323,055 - 83,323,751 (697)
query : 1 - 663 (663/663)
2 exons
InterPro :
IPR007304 : TAP42-like protein
GO :
0009966 : Biological Process : regulation of signal transduction
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0183355)
CAGE tag :
H22BA79M0907
Ortholog candidate ( ->
Evola
)
Tetraodon
sp. (Tetraodon) : CR679357
Macaca
sp. (Macaque) : XM_001083324
Pan
sp. (Chimpanzee) : XR_022772
HIX0120191
HIT000347157 (
ENST00000365570
)
(Non-protein coding transcript.)
genome : 83,323,791 - 83,323,859 (69)
query : 1 - 69 (69/69)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0120191)
HIX0004334
HIT000210147 (
NM_031372
)
(Heterogeneous nuclear ribonucleoprotein D-like; hnRNP D-like; hnRNP DL; AU-rich element RNA-binding factor; JKT41-binding protein; Protein laAUF1;)
genome : 83,343,717 - 83,351,378 (7,662)
query : 1 - 4,140 (4,140/4,157)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004334)
HIX0004334
HIT000398498 (
NR_003249
)
(Heterogeneous nuclear ribonucleoprotein D-like; hnRNP D-like; hnRNP DL; AU-rich element RNA-binding factor; JKT41-binding protein; Protein laAUF1;)
genome : 83,343,717 - 83,351,378 (7,662)
query : 1 - 4,245 (4,245/4,262)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004334)
HIX0004334
HIT000657397 (
NM_001207000
)
(Heterogeneous nuclear ribonucleoprotein D-like isoform b.)
genome : 83,343,717 - 83,351,378 (7,662)
query : 1 - 3,969 (3,969/3,986)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004334)
HIX0004334
HIT000114175 (
ENST00000295470
)
(Heterogeneous nuclear ribonucleoprotein D-like; hnRNP D-like; hnRNP DL; AU-rich element RNA-binding factor; JKT41-binding protein; Protein laAUF1;)
genome : 83,343,717 - 83,351,019 (7,303)
query : 1 - 3,781 (3,781/3,781)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004334)
HIX0004334
HIT000102048
(
D89678
)
(Heterogeneous nuclear ribonucleoprotein D-like; hnRNP D-like; hnRNP DL; AU-rich element RNA-binding factor; JKT41-binding protein; Protein laAUF1;)
genome : 83,344,364 - 83,350,453 (6,090)
query : 1 - 2,438 (2,438/2,439)
9 exons
identity = 0.996
3'(0.992;0.998;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004334)
HIX0004334
HIT000494746
(
AK300122
)
(Heterogeneous nuclear ribonucleoprotein D-like; hnRNP D-like; hnRNP DL; AU-rich element RNA-binding factor; JKT41-binding protein; Protein laAUF1;)
genome : 83,345,747 - 83,350,464 (4,718)
query : 1 - 1,196 (1,196/1,196)
8 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.994;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004334)
HIX0004334
HIT000264751
(
BC071944
)
(Heterogeneous nuclear ribonucleoprotein D-like; hnRNP D-like; hnRNP DL; AU-rich element RNA-binding factor; JKT41-binding protein; Protein laAUF1;)
genome : 83,345,781 - 83,350,959 (5,179)
query : 1 - 1,657 (1,657/1,677)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004334)
HIX0004334
HIT000254770
(
AY453824
)
(Heterogeneous nuclear ribonucleoprotein D-like; hnRNP D-like; hnRNP DL; AU-rich element RNA-binding factor; JKT41-binding protein; Protein laAUF1;)
genome : 83,345,781 - 83,350,477 (4,697)
query : 1 - 1,175 (1,175/1,193)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004334)
HIX0004334
HIT000035397
(
BC011714
)
(Heterogeneous nuclear ribonucleoprotein D-like; hnRNP D-like; hnRNP DL; AU-rich element RNA-binding factor; JKT41-binding protein; Protein laAUF1;)
genome : 83,345,781 - 83,351,019 (5,239)
query : 1 - 1,717 (1,717/1,734)
8 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.998)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004334)
HIX0004334
HIT000089828
(
BC018961
)
(Heterogeneous nuclear ribonucleoprotein D-like; hnRNP D-like; hnRNP DL; AU-rich element RNA-binding factor; JKT41-binding protein; Protein laAUF1;)
genome : 83,345,781 - 83,351,019 (5,239)
query : 1 - 1,717 (1,717/1,734)
8 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.998)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004334)
HIX0004334
HIT000033188
(
BC007392
)
(Heterogeneous nuclear ribonucleoprotein D-like; hnRNP D-like; hnRNP DL; AU-rich element RNA-binding factor; JKT41-binding protein; Protein laAUF1;)
genome : 83,345,781 - 83,350,830 (5,050)
query : 1 - 1,528 (1,528/1,545)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004334)
HIX0004334
HIT000323535
(
X75683
)
(Non-protein coding transcript.)
genome : 83,345,781 - 83,347,223 (1,443)
query : 2 - 291 (290/301)
2 exons
identity = 0.993
3'(0.992;1.000)5'
coverage = 0.997
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004334)
HIX0004334
HIT000058500
(
AB017019
)
Representative transcript
(Heterogeneous nuclear ribonucleoprotein D-like; hnRNP D-like; hnRNP DL; AU-rich element RNA-binding factor; JKT41-binding protein; Protein laAUF1;)
genome : 83,345,782 - 83,351,378 (5,597)
query : 1 - 2,180 (2,180/2,180)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.999)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004334)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AB017020
Macaca
sp. (Macaque) : AB170759
Danio
sp. (Zebrafish) : BC048898
Danio
sp. (Zebrafish) : BC055525
Rattus
sp. (Rat) : BC104683
Bos
sp. (Cow) : BC134448
Tetraodon
sp. (Tetraodon) : CR643660
Gallus
sp. (Chicken) : ENSGALT00000038016
Monodelphis
sp. (Opossum) : ENSMODT00000015207
Oryzias
sp. (Medaka) : ENSORLT00000002283
Pongo
sp. (Orangutan) : ENSPPYT00000017298
Pan
sp. (Chimpanzee) : ENSPTRT00000030184
Canis
sp. (Dog) : XM_853073
HIX0004334
HIT000603093 (
ENST00000502762
)
(Heterogeneous nuclear ribonucleoprotein D-like; hnRNP D-like; hnRNP DL; AU-rich element RNA-binding factor; JKT41-binding protein; Protein laAUF1;)
genome : 83,345,782 - 83,351,294 (5,513)
query : 1 - 2,096 (2,096/2,096)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004334)
HIX0004334
HIT000714033 (
ENST00000602300
)
(Heterogeneous nuclear ribonucleoprotein D-like; hnRNP D-like; hnRNP DL; AU-rich element RNA-binding factor; JKT41-binding protein; Protein laAUF1;)
genome : 83,345,782 - 83,350,600 (4,819)
query : 1 - 1,402 (1,402/1,402)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004334)
HIX0004334
HIT000102035
(
D89092
)
(Heterogeneous nuclear ribonucleoprotein D-like; hnRNP D-like; hnRNP DL; AU-rich element RNA-binding factor; JKT41-binding protein; Protein laAUF1;)
genome : 83,345,782 - 83,350,594 (4,813)
query : 1 - 1,291 (1,291/1,291)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004334)
HIX0004334
HIT000307826 (
ENST00000349655
)
(Heterogeneous nuclear ribonucleoprotein D-like; hnRNP D-like; hnRNP DL; AU-rich element RNA-binding factor; JKT41-binding protein; Protein laAUF1;)
genome : 83,345,782 - 83,350,594 (4,813)
query : 1 - 1,120 (1,120/1,120)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004334)
HIX0004334
HIT000014094
(
AK057480
)
(Heterogeneous nuclear ribonucleoprotein D-like; hnRNP D-like; hnRNP DL; JKT41-binding protein;)
genome : 83,345,784 - 83,347,788 (2,005)
query : 2 - 1,673 (1,672/1,673)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 8, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004334)
HIX0004334
HIT000607700 (
ENST00000507721
)
(Heterogeneous nuclear ribonucleoprotein D-like; hnRNP D-like; hnRNP DL; JKT41-binding protein;)
genome : 83,345,784 - 83,347,788 (2,005)
query : 1 - 1,672 (1,672/1,672)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 8, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004334)
HIX0004334
HIT000060577
(
AB066484
)
(Heterogeneous nuclear ribonucleoprotein D-like; hnRNP D-like; hnRNP DL; AU-rich element RNA-binding factor; JKT41-binding protein; Protein laAUF1;)
genome : 83,345,996 - 83,350,486 (4,491)
query : 1 - 798 (798/798)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004334)
HIX0004334
HIT000489307
(
AK294683
)
(Heterogeneous nuclear ribonucleoprotein D-like; hnRNP D-like; hnRNP DL; JKT41-binding protein;)
genome : 83,346,736 - 83,350,578 (3,843)
query : 1 - 1,143 (1,143/1,143)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004334)
HIX0004334
HIT000614001 (
ENST00000514511
)
(Heterogeneous nuclear ribonucleoprotein D-like; hnRNP D-like; hnRNP DL; JKT41-binding protein;)
genome : 83,346,736 - 83,350,578 (3,843)
query : 1 - 1,143 (1,143/1,143)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004334)
HIX0004334
HIT000267120
(
CR407623
)
(Heterogeneous nuclear ribonucleoprotein D-like; hnRNP D-like; hnRNP DL; AU-rich element RNA-binding factor; JKT41-binding protein; Protein laAUF1;)
genome : 83,347,215 - 83,350,843 (3,629)
query : 1 - 1,260 (1,260/1,260)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004334)
HIX0004335
HIT000111088 (
ENST00000273920
)
(Enolase-phosphatase E1; EC=3.1.3.77; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; MASA homolog;)
genome : 83,351,715 - 83,382,244 (30,530)
query : 1 - 2,025 (2,025/2,025)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.77
KEGG pathway :
00270 : Cysteine and methionine metabolism (61)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto_mito 7.83333, mito_pero 7.33333, extr 6,
plas 5, E.R. 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004335)
HIX0004335
HIT000208310 (
NM_021204
)
(Enolase-phosphatase E1; EC=3.1.3.77; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; MASA homolog;)
genome : 83,351,726 - 83,382,244 (30,519)
query : 1 - 2,014 (2,014/2,032)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.77
KEGG pathway :
00270 : Cysteine and methionine metabolism (61)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto_mito 7.83333, mito_pero 7.33333, extr 6,
plas 5, E.R. 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004335)
HIX0004335
HIT000242627
(
AF087881
)
(Enolase-phosphatase E1.)
genome : 83,351,763 - 83,381,253 (29,491)
query : 4 - 994 (991/996)
6 exons
identity = 0.986
5'(0.987;1.000;1.000;1.000;0.984;0.937)3'
coverage = 0.995
EC number :
EC 3.1.3.77
KEGG pathway :
00270 : Cysteine and methionine metabolism (61)
01100 : Metabolic pathways (1346)
InterPro :
IPR006439 : HAD hydrolase, subfamily IA
IPR023214 : HAD-like domain
IPR023943 : Enolase-phosphatase E1
GO :
0000287 : Molecular Function : magnesium ion binding
0008152 : Biological Process : metabolic process
0016787 : Molecular Function : hydrolase activity
0019509 : Biological Process : L-methionine salvage from methylthioadenosine
0043874 : Molecular Function : acireductone synthase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto_mito 8.33333, mito_pero 8.33333, extr 5,
E.R. 5, plas 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004335)
HIX0004335
HIT000001906
(
AF113125
)
Representative transcript
(Enolase-phosphatase E1; EC=3.1.3.77; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; MASA homolog;)
genome : 83,351,763 - 83,382,240 (30,478)
query : 3 - 1,972 (1,970/1,992)
6 exons
identity = 0.998
5'(0.993;1.000;1.000;1.000;1.000;0.998)3'
coverage = 0.999
EC number :
EC 3.1.3.77
KEGG pathway :
00270 : Cysteine and methionine metabolism (61)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto_mito 7.83333, mito_pero 7.33333, extr 6,
plas 5, E.R. 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004335)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB174223
Mus
sp. (Mouse) : AK080714
Danio
sp. (Zebrafish) : BC074060
Rattus
sp. (Rat) : BC087697
Bos
sp. (Cow) : BC119871
Gallus
sp. (Chicken) : CR524276
Equus
sp. (Horse) : ENSECAT00000020874
Oryzias
sp. (Medaka) : ENSORLT00000002300
Pongo
sp. (Orangutan) : ENSPPYT00000017299
Takifugu
sp. (Fugu) : SINFRUT00000136509
Macaca
sp. (Macaque) : XM_001094685
Pan
sp. (Chimpanzee) : XM_001142974
Monodelphis
sp. (Opossum) : XM_001362337
Canis
sp. (Dog) : XM_535629
HIX0004335
HIT000005930
(
AK022656
)
(Enolase-phosphatase E1; EC=3.1.3.77; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; MASA homolog;)
genome : 83,351,770 - 83,382,240 (30,471)
query : 4 - 1,969 (1,966/1,976)
6 exons
identity = 0.998
5'(0.993;1.000;1.000;1.000;0.992;1.000)3'
coverage = 0.995
EC number :
EC 3.1.3.77
KEGG pathway :
00270 : Cysteine and methionine metabolism (61)
01100 : Metabolic pathways (1346)
InterPro :
IPR006439 : HAD hydrolase, subfamily IA
IPR023214 : HAD-like domain
IPR023943 : Enolase-phosphatase E1
GO :
0000287 : Molecular Function : magnesium ion binding
0008152 : Biological Process : metabolic process
0016787 : Molecular Function : hydrolase activity
0019509 : Biological Process : L-methionine salvage from methylthioadenosine
0043874 : Molecular Function : acireductone synthase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto_mito 7.83333, mito_pero 7.33333, extr 6,
plas 5, E.R. 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004335)
HIX0004335
HIT000262055
(
BC065815
)
(Enolase-phosphatase E1; EC=3.1.3.77; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; MASA homolog;)
genome : 83,351,795 - 83,382,240 (30,446)
query : 1 - 1,941 (1,941/1,955)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.77
KEGG pathway :
00270 : Cysteine and methionine metabolism (61)
01100 : Metabolic pathways (1346)
InterPro :
IPR006439 : HAD hydrolase, subfamily IA
IPR023214 : HAD-like domain
IPR023943 : Enolase-phosphatase E1
GO :
0000287 : Molecular Function : magnesium ion binding
0008152 : Biological Process : metabolic process
0016787 : Molecular Function : hydrolase activity
0019509 : Biological Process : L-methionine salvage from methylthioadenosine
0043874 : Molecular Function : acireductone synthase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto_mito 7.83333, mito_pero 7.33333, extr 6,
plas 5, E.R. 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004335)
HIX0004335
HIT000609490 (
ENST00000509635
)
(Enolase-phosphatase E1.)
genome : 83,351,801 - 83,382,208 (30,408)
query : 1 - 1,874 (1,874/1,874)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.77
KEGG pathway :
00270 : Cysteine and methionine metabolism (61)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16, nucl 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004335)
HIX0004335
HIT000030316
(
BC001317
)
(Enolase-phosphatase E1; EC=3.1.3.77; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase;)
genome : 83,351,815 - 83,382,240 (30,426)
query : 1 - 1,689 (1,689/1,705)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.77
KEGG pathway :
00270 : Cysteine and methionine metabolism (61)
01100 : Metabolic pathways (1346)
InterPro :
IPR006439 : HAD hydrolase, subfamily IA
IPR023214 : HAD-like domain
IPR023943 : Enolase-phosphatase E1
GO :
0000287 : Molecular Function : magnesium ion binding
0008152 : Biological Process : metabolic process
0016787 : Molecular Function : hydrolase activity
0019509 : Biological Process : L-methionine salvage from methylthioadenosine
0043874 : Molecular Function : acireductone synthase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, cyto 14, nucl 10, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004335)
HIX0004335
HIT000605949 (
ENST00000505846
)
(Enolase-phosphatase E1; EC=3.1.3.77; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase;)
genome : 83,351,815 - 83,382,240 (30,426)
query : 1 - 1,689 (1,689/1,689)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.77
KEGG pathway :
00270 : Cysteine and methionine metabolism (61)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, cyto 14, nucl 10, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004335)
HIX0004335
HIT000267991
(
CR457141
)
(Enolase-phosphatase E1; EC=3.1.3.77; 2,3-diketo-5-methylthio-1-phosphopentane phosphatase; MASA homolog;)
genome : 83,351,983 - 83,381,272 (29,290)
query : 1 - 785 (785/786)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.993)3'
coverage = 0.999
EC number :
EC 3.1.3.77
KEGG pathway :
00270 : Cysteine and methionine metabolism (61)
01100 : Metabolic pathways (1346)
InterPro :
IPR006439 : HAD hydrolase, subfamily IA
IPR023214 : HAD-like domain
IPR023943 : Enolase-phosphatase E1
GO :
0000287 : Molecular Function : magnesium ion binding
0008152 : Biological Process : metabolic process
0016787 : Molecular Function : hydrolase activity
0019509 : Biological Process : L-methionine salvage from methylthioadenosine
0043874 : Molecular Function : acireductone synthase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto_mito 7.83333, mito_pero 7.33333, extr 6,
plas 5, E.R. 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004335)
HIX0004335
HIT000242826
(
AF177286
)
(Enolase-phosphatase E1.)
genome : 83,372,223 - 83,382,244 (10,022)
query : 1 - 1,543 (1,543/1,561)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 3.1.3.77
KEGG pathway :
00270 : Cysteine and methionine metabolism (61)
01100 : Metabolic pathways (1346)
InterPro :
IPR006439 : HAD hydrolase, subfamily IA
IPR023214 : HAD-like domain
IPR023943 : Enolase-phosphatase E1
GO :
0000287 : Molecular Function : magnesium ion binding
0008152 : Biological Process : metabolic process
0016787 : Molecular Function : hydrolase activity
0019509 : Biological Process : L-methionine salvage from methylthioadenosine
0043874 : Molecular Function : acireductone synthase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16, nucl 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004335)
HIX0004335
HIT000024433
(
AL110167
)
(Enolase-phosphatase E1.)
genome : 83,378,095 - 83,382,240 (4,146)
query : 1 - 1,203 (1,203/1,219)
2 exons
identity = 0.999
5'(1.000;0.999)3'
coverage = 1.000
EC number :
EC 3.1.3.77
KEGG pathway :
00270 : Cysteine and methionine metabolism (61)
01100 : Metabolic pathways (1346)
InterPro :
IPR023214 : HAD-like domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 12, nucl 7.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004335)
HIX0004336
HIT000006329
(
AK023055
)
(Transmembrane protein 150C;)
genome : 83,404,960 - 83,411,393 (6,434)
query : 11 - 2,103 (2,093/2,103)
2 exons
identity = 0.999
3'(0.998;1.000)5'
coverage = 0.995
InterPro :
IPR019402 : Frag1/DRAM/Sfk1
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004336)
HIX0004336
HIT000398094 (
NM_001080506
)
(Transmembrane protein 150C;)
genome : 83,405,604 - 83,483,126 (77,523)
query : 1 - 1,888 (1,888/1,888)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004336)
HIX0004336
HIT000547796 (
ENST00000449862
)
(Transmembrane protein 150C;)
genome : 83,405,743 - 83,483,367 (77,625)
query : 1 - 1,990 (1,990/1,990)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004336)
HIX0004336
HIT000503265
(
BC147019
)
Representative transcript
(Transmembrane protein 150C;)
genome : 83,405,743 - 83,483,109 (77,367)
query : 1 - 1,735 (1,735/1,735)
8 exons
identity = 0.995
3'(0.992;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR019402 : Frag1/DRAM/Sfk1
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004336)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC055321
Bos
sp. (Cow) : BC140510
Takifugu
sp. (Fugu) : SINFRUT00000136512
Rattus
sp. (Rat) : XM_001067823
Macaca
sp. (Macaque) : XM_001082839
Danio
sp. (Zebrafish) : XM_001342631
Monodelphis
sp. (Opossum) : XM_001362416
Equus
sp. (Horse) : XM_001493769
Gallus
sp. (Chicken) : XM_420558
Pan
sp. (Chimpanzee) : XM_517190
Canis
sp. (Dog) : XM_845701
HIX0004336
HIT000503273
(
BC147027
)
(Transmembrane protein 150C;)
genome : 83,405,743 - 83,483,109 (77,367)
query : 1 - 1,743 (1,743/1,743)
8 exons
identity = 0.991
3'(0.987;1.000;1.000;1.000;1.000;1.000;1.000;
0.980)5'
coverage = 1.000
InterPro :
IPR019402 : Frag1/DRAM/Sfk1
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004336)
HIX0004336
HIT000615188 (
ENST00000515780
)
(Transmembrane protein 150C;)
genome : 83,405,967 - 83,483,510 (77,544)
query : 1 - 1,652 (1,652/1,652)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004336)
HIX0004336
HIT000494566
(
AK299942
)
(Transmembrane protein 150C;)
genome : 83,405,967 - 83,483,373 (77,407)
query : 1 - 1,515 (1,515/1,515)
8 exons
identity = 0.999
3'(1.000;1.000;0.992;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR019402 : Frag1/DRAM/Sfk1
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004336)
HIX0004336
HIT000492136
(
AK297512
)
(Transmembrane protein 150C;)
genome : 83,406,284 - 83,483,131 (76,848)
query : 1 - 1,006 (1,006/1,006)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR019402 : Frag1/DRAM/Sfk1
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004336)
HIX0004336
HIT000492058
(
AK297434
)
(Transmembrane protein 150C;)
genome : 83,406,393 - 83,483,510 (77,118)
query : 1 - 1,226 (1,226/1,226)
8 exons
identity = 0.999
3'(1.000;0.994;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR019402 : Frag1/DRAM/Sfk1
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004336)
HIX0004336
HIT000495740
(
AK301116
)
(Transmembrane protein 150C;)
genome : 83,406,452 - 83,483,100 (76,649)
query : 1 - 1,014 (1,014/1,014)
8 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.970;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR019402 : Frag1/DRAM/Sfk1
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004336)
HIX0004336
HIT000608617 (
ENST00000508701
)
(Transmembrane protein 150C;)
genome : 83,411,238 - 83,483,108 (71,871)
query : 1 - 566 (566/566)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004336)
HIX0205339
HIT000592184 (
ENST00000488538
)
(Ribosomal protein L7A/L8 family protein.)
genome : 83,411,976 - 83,412,788 (813)
query : 1 - 813 (813/813)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 6.5, cyto_nucl 5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205339)
HIX0004336
HIT000099538
(
BC052613
)
(40S ribosomal protein S6; Phosphoprotein NP33;)
genome : 83,415,956 - 83,417,431 (1,476)
query : 1 - 1,476 (1,476/1,493)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR001377 : Ribosomal protein S6e
GO :
0003735 : Molecular Function : structural constituent of ribosome
0005622 : Cellular Component : intracellular
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 15, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004336)
HIX0004336
HIT000591712 (
ENST00000488045
)
(40S ribosomal protein S6; Phosphoprotein NP33;)
genome : 83,415,956 - 83,417,431 (1,476)
query : 1 - 1,476 (1,476/1,493)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 15, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004336)
HIX0004336
HIT000576166 (
ENST00000471756
)
(40S ribosomal protein S6; Phosphoprotein NP33;)
genome : 83,415,990 - 83,417,046 (1,057)
query : 1 - 1,057 (1,057/1,057)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 15, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004336)
HIX0004336
HIT000552882 (
ENST00000454948
)
(Transmembrane protein 150C;)
genome : 83,423,913 - 83,483,131 (59,219)
query : 1 - 403 (403/403)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 27, plas 2, mito 1.5, E.R._mito 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004336)
HIX0205877
HIT000611710 (
ENST00000512025
)
(Conserved hypothetical protein.)
genome : 83,492,290 - 83,492,967 (678)
query : 1 - 362 (362/362)
2 exons
identity = 0.997
5'(1.000;0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 10, nucl 9, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205877)
HIX0205569
HIT000606303 (
ENST00000506227
)
(Protein-tyrosine phosphatase, receptor/non-receptor type domain containing protein.)
genome : 83,501,270 - 83,502,537 (1,268)
query : 1 - 1,268 (1,268/1,268)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 11.3333, extr 9,
cyto_plas 8.66667, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205569)
HIX0031411
HIT000251695
(
AY316301
)
Representative transcript
(Conserved hypothetical protein.)
genome : 83,534,266 - 83,542,590 (8,325)
query : 1 - 910 (910/910)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 10.5, cyto_nucl 9.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031411)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000017300
Pan
sp. (Chimpanzee) : ENSPTRT00000044465
HIX0031411
HIT000251696
(
AY316302
)
(Conserved hypothetical protein.)
genome : 83,534,266 - 83,542,590 (8,325)
query : 1 - 848 (848/848)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 10.5, cyto_nucl 9.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031411)
HIX0031411
HIT000524485 (
ENST00000426551
)
(Conserved hypothetical protein.)
genome : 83,534,266 - 83,542,590 (8,325)
query : 1 - 910 (910/910)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 10.5, cyto_nucl 9.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031411)
HIX0031411
HIT000562337 (
NR_024087
)
(Conserved hypothetical protein.)
genome : 83,534,266 - 83,542,590 (8,325)
query : 1 - 910 (910/910)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 10.5, cyto_nucl 9.5, cyto 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031411)
HIX0031411
HIT000562338 (
NR_024088
)
(Conserved hypothetical protein.)
genome : 83,534,266 - 83,542,590 (8,325)
query : 1 - 848 (848/848)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 10.5, cyto_nucl 9.5, cyto 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031411)
HIX0031411
HIT000615217 (
ENST00000515811
)
(Conserved hypothetical protein.)
genome : 83,534,266 - 83,542,590 (8,325)
query : 1 - 848 (848/848)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 10.5, cyto_nucl 9.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031411)
HIX0200630
HIT000026803
(
AL831891
)
(Stearoyl-CoA desaturase 5 isoform a.)
genome : 83,550,692 - 83,601,919 (51,228)
query : 1 - 2,271 (2,271/2,287)
3 exons
identity = 0.997
3'(0.997;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.19.1
KEGG pathway :
01040 : Biosynthesis of unsaturated fatty acids (9)
InterPro :
IPR001522 : Fatty acid desaturase, type 1, C-terminal
IPR005804 : Fatty acid desaturase, type 1
IPR015876 : Fatty acid desaturase, type 1, core
GO :
0004768 : Molecular Function : stearoyl-CoA 9-desaturase activity
0005506 : Molecular Function : iron ion binding
0005783 : Cellular Component : endoplasmic reticulum
0006629 : Biological Process : lipid metabolic process
0006633 : Biological Process : fatty acid biosynthetic process
0016020 : Cellular Component : membrane
0016717 : Molecular Function : oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15, pero 5.5, E.R._mito 5.33333,
mito_pero 5.33333, mito 3.5, E.R. 3, extr 2, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200630)
HIX0200630
HIT000099028
(
BC048971
)
(Stearoyl-CoA desaturase 5 isoform a.)
genome : 83,550,692 - 83,557,959 (7,268)
query : 1 - 2,195 (2,195/2,210)
2 exons
identity = 0.996
3'(0.997;0.991)5'
coverage = 1.000
EC number :
EC 1.14.19.1
KEGG pathway :
01040 : Biosynthesis of unsaturated fatty acids (9)
InterPro :
IPR001522 : Fatty acid desaturase, type 1, C-terminal
IPR015876 : Fatty acid desaturase, type 1, core
GO :
0004768 : Molecular Function : stearoyl-CoA 9-desaturase activity
0005506 : Molecular Function : iron ion binding
0005783 : Cellular Component : endoplasmic reticulum
0006633 : Biological Process : fatty acid biosynthetic process
0016020 : Cellular Component : membrane
0016717 : Molecular Function : oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 9.5, cyto 9, extr 8, cyto_pero 7, nucl 6.5,
mito 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200630)
HIX0200630
HIT000078811
(
AF389338
)
(Stearoyl-CoA desaturase 5; EC=1.14.19.1; Acyl-CoA-desaturase 4; HSCD5; Stearoyl-CoA 9-desaturase;)
genome : 83,550,692 - 83,719,925 (169,234)
query : 1 - 3,016 (3,016/3,030)
5 exons
identity = 0.999
3'(0.999;1.000;0.995;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.19.1
KEGG pathway :
01040 : Biosynthesis of unsaturated fatty acids (9)
InterPro :
IPR001522 : Fatty acid desaturase, type 1, C-terminal
IPR005804 : Fatty acid desaturase, type 1
IPR015876 : Fatty acid desaturase, type 1, core
GO :
0004768 : Molecular Function : stearoyl-CoA 9-desaturase activity
0005506 : Molecular Function : iron ion binding
0005783 : Cellular Component : endoplasmic reticulum
0006629 : Biological Process : lipid metabolic process
0006633 : Biological Process : fatty acid biosynthetic process
0016020 : Cellular Component : membrane
0016717 : Molecular Function : oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 26, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200630)
HIX0200630
HIT000366335 (
NM_001037582
)
(Stearoyl-CoA desaturase 5; EC=1.14.19.1; Acyl-CoA-desaturase 4; HSCD5; Stearoyl-CoA 9-desaturase;)
genome : 83,550,690 - 83,720,010 (169,321)
query : 1 - 3,103 (3,103/3,108)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
EC number :
EC 1.14.19.1
KEGG pathway :
01040 : Biosynthesis of unsaturated fatty acids (9)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 26, E.R. 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200630)
HIX0200630
HIT000122094 (
ENST00000319540
)
(Stearoyl-CoA desaturase 5; EC=1.14.19.1; Acyl-CoA-desaturase 4; HSCD5; Stearoyl-CoA 9-desaturase;)
genome : 83,550,692 - 83,720,010 (169,319)
query : 1 - 3,101 (3,101/3,101)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.19.1
KEGG pathway :
01040 : Biosynthesis of unsaturated fatty acids (9)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 26, E.R. 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200630)
HIX0200630
HIT000501331
(
BC137429
)
(Stearoyl-CoA desaturase 5; EC=1.14.19.1; Acyl-CoA-desaturase 4; HSCD5; Stearoyl-CoA 9-desaturase;)
genome : 83,552,070 - 83,719,914 (167,845)
query : 1 - 1,628 (1,628/1,628)
5 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.19.1
KEGG pathway :
01040 : Biosynthesis of unsaturated fatty acids (9)
InterPro :
IPR001522 : Fatty acid desaturase, type 1, C-terminal
IPR005804 : Fatty acid desaturase, type 1
IPR015876 : Fatty acid desaturase, type 1, core
GO :
0004768 : Molecular Function : stearoyl-CoA 9-desaturase activity
0005506 : Molecular Function : iron ion binding
0005783 : Cellular Component : endoplasmic reticulum
0006629 : Biological Process : lipid metabolic process
0006633 : Biological Process : fatty acid biosynthetic process
0016020 : Cellular Component : membrane
0016717 : Molecular Function : oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 26, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200630)
HIX0200630
HIT000501334
(
BC137432
)
Representative transcript
(Stearoyl-CoA desaturase 5; EC=1.14.19.1; Acyl-CoA-desaturase 4; HSCD5; Stearoyl-CoA 9-desaturase;)
genome : 83,552,070 - 83,719,914 (167,845)
query : 1 - 1,627 (1,627/1,627)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.19.1
KEGG pathway :
01040 : Biosynthesis of unsaturated fatty acids (9)
InterPro :
IPR001522 : Fatty acid desaturase, type 1, C-terminal
IPR005804 : Fatty acid desaturase, type 1
IPR015876 : Fatty acid desaturase, type 1, core
GO :
0004768 : Molecular Function : stearoyl-CoA 9-desaturase activity
0005506 : Molecular Function : iron ion binding
0005783 : Cellular Component : endoplasmic reticulum
0006629 : Biological Process : lipid metabolic process
0006633 : Biological Process : fatty acid biosynthetic process
0016020 : Cellular Component : membrane
0016717 : Molecular Function : oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 26, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200630)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB170811
Takifugu
sp. (Fugu) : AY741384
Danio
sp. (Zebrafish) : BC095851
Pongo
sp. (Orangutan) : CR857900
Bos
sp. (Cow) : EF014951
Danio
sp. (Zebrafish) : ENSDART00000050006
Monodelphis
sp. (Opossum) : ENSMODT00000015291
Mus
sp. (Mouse) : ENSMUST00000116539
Oryzias
sp. (Medaka) : ENSORLT00000011566
Tetraodon
sp. (Tetraodon) : GSTENT00035894001
Pan
sp. (Chimpanzee) : XM_001141318
Equus
sp. (Horse) : XM_001493064
Gallus
sp. (Chicken) : XM_420557
Canis
sp. (Dog) : XM_544953
HIX0200630
HIT000007959
(
AK024685
)
(Stearoyl-CoA desaturase 5 isoform b.)
genome : 83,581,040 - 83,719,925 (138,886)
query : 1 - 1,995 (1,995/2,021)
4 exons
identity = 0.998
3'(0.999;0.995;0.992;1.000)5'
coverage = 1.000
EC number :
EC 1.14.19.1
KEGG pathway :
01040 : Biosynthesis of unsaturated fatty acids (9)
InterPro :
IPR005804 : Fatty acid desaturase, type 1
IPR015876 : Fatty acid desaturase, type 1, core
GO :
0006629 : Biological Process : lipid metabolic process
0016717 : Molecular Function : oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, E.R. 3, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200630)
HIX0200630
HIT000209584 (
NM_024906
)
(Stearoyl-CoA desaturase 5 isoform b.)
genome : 83,581,040 - 83,720,010 (138,971)
query : 1 - 2,080 (2,080/2,080)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.19.1
KEGG pathway :
01040 : Biosynthesis of unsaturated fatty acids (9)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, E.R. 3, golg 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200630)
HIX0200630
HIT000111087 (
ENST00000273908
)
(Stearoyl-CoA desaturase 5 isoform b.)
genome : 83,581,040 - 83,719,925 (138,886)
query : 1 - 1,995 (1,995/1,995)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.19.1
KEGG pathway :
01040 : Biosynthesis of unsaturated fatty acids (9)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, E.R. 3, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200630)
HIX0200630
HIT000032097
(
BC004936
)
(Stearoyl-CoA desaturase 5 isoform b.)
genome : 83,615,839 - 83,719,909 (104,071)
query : 1 - 842 (842/865)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.19.1
KEGG pathway :
01040 : Biosynthesis of unsaturated fatty acids (9)
InterPro :
IPR015876 : Fatty acid desaturase, type 1, core
GO :
0016717 : Molecular Function : oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200630)
HIX0200630
HIT000112276 (
ENST00000282709
)
(Stearoyl-CoA desaturase 5 isoform b.)
genome : 83,615,840 - 83,719,909 (104,070)
query : 1 - 841 (841/841)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.19.1
KEGG pathway :
01040 : Biosynthesis of unsaturated fatty acids (9)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200630)
HIX0120753
HIT000470937 (
ENST00000385013
)
(Non-protein coding transcript.)
genome : 83,674,490 - 83,674,583 (94)
query : 1 - 94 (94/94)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0120753)
HIX0120753
HIT000658293 (
NR_030301
)
(Non-protein coding transcript.)
genome : 83,674,490 - 83,674,583 (94)
query : 1 - 94 (94/94)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0120753)
HIX0018866
HIT000003482
(
AK001008
)
Representative transcript
(Conserved hypothetical protein.)
genome : 83,708,480 - 83,710,764 (2,285)
query : 1 - 2,283 (2,283/2,283)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018866)
HIX0215833
HIT000072123
(
AF161393
)
(Conserved hypothetical protein.)
genome : 83,739,814 - 83,765,613 (25,800)
query : 1 - 1,562 (1,562/1,592)
8 exons
identity = 0.998
3'(0.998;1.000;1.000;0.996;1.000;1.000;1.000;
0.987)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215833)
HIX0215833
HIT000072181
(
AF161452
)
(Conserved hypothetical protein.)
genome : 83,739,814 - 83,763,567 (23,754)
query : 1 - 1,382 (1,382/1,410)
6 exons
identity = 0.996
3'(0.997;1.000;1.000;0.992;1.000;0.993)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215833)
HIX0215833
HIT000023825
(
AL049463
)
(Conserved hypothetical protein.)
genome : 83,739,814 - 83,740,384 (571)
query : 1 - 571 (571/587)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto_nucl 10, nucl 7.5, cyto 7.5, extr 3,
pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215833)
HIX0215833
HIT000604196 (
ENST00000503937
)
(Conserved hypothetical protein.)
genome : 83,739,814 - 83,765,613 (25,800)
query : 1 - 1,564 (1,564/1,564)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215833)
HIX0215833
HIT000084694
(
AY137583
)
(Conserved hypothetical protein.)
genome : 83,740,158 - 83,778,191 (38,034)
query : 1 - 1,596 (1,596/1,596)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 9.5, cyto_pero 7, E.R._mito 6, mito 5, E.R. 5,
pero 3.5, extr 3, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215833)
HIX0215833
HIT000614519 (
ENST00000515062
)
(Conserved hypothetical protein.)
genome : 83,740,174 - 83,748,765 (8,592)
query : 1 - 597 (597/597)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 14, nucl 6, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215833)
HIX0215833
HIT000045770
(
AK125897
)
Representative transcript
(WD40-repeat-containing domain containing protein.)
genome : 83,740,175 - 83,793,103 (52,929)
query : 1 - 3,447 (3,447/3,447)
20 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.994;0.990;0.998)5'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
E.R. 13.5, extr 11, E.R._golg 10, golg 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215833)
HIX0215833
HIT000109295 (
ENST00000264405
)
(WD40-repeat-containing domain containing protein.)
genome : 83,740,175 - 83,793,103 (52,929)
query : 1 - 3,447 (3,447/3,447)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, E.R. 7, golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215833)
HIX0215833
HIT000605609 (
ENST00000505479
)
(Conserved hypothetical protein.)
genome : 83,740,191 - 83,742,604 (2,414)
query : 1 - 631 (631/631)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 9.5, E.R._mito 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215833)
HIX0215833
HIT000611062 (
ENST00000511338
)
(Conserved hypothetical protein.)
genome : 83,745,751 - 83,769,996 (24,246)
query : 1 - 657 (657/657)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, nucl 13, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215833)
HIX0215833
HIT000003488
(
AK001014
)
(Conserved hypothetical protein.)
genome : 83,748,522 - 83,783,727 (35,206)
query : 18 - 1,781 (1,764/1,801)
12 exons
identity = 0.987
3'(0.920;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.989;1.000;1.000;1.000)5'
coverage = 0.979
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 9.5, cyto_nucl 9.5, nucl 8.5, pero 6,
mito_pero 4.5, E.R. 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215833)
HIX0215833
HIT000613866 (
ENST00000514362
)
(Conserved hypothetical protein.)
genome : 83,748,653 - 83,752,514 (3,862)
query : 1 - 617 (617/617)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 17.5, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215833)
HIX0215833
HIT000615160 (
ENST00000515749
)
(Conserved hypothetical protein.)
genome : 83,748,701 - 83,763,977 (15,277)
query : 1 - 829 (829/829)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 3, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215833)
HIX0215833
HIT000609543 (
ENST00000509691
)
(Conserved hypothetical protein.)
genome : 83,748,709 - 83,750,566 (1,858)
query : 1 - 491 (491/491)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14.5, nucl 8, cysk 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215833)
HIX0031560
HIT000067121
(
AF086242
)
Representative transcript
(Conserved hypothetical protein.)
genome : 83,758,497 - 83,758,960 (464)
query : 1 - 464 (464/473)
1 exon
identity = 0.994
3'(0.994)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito 13, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031560)
HIX0215833
HIT000607800 (
ENST00000507828
)
(Conserved hypothetical protein.)
genome : 83,769,979 - 83,788,084 (18,106)
query : 1 - 1,329 (1,329/1,329)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 15.5, nucl 8, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215833)
HIX0215833
HIT000612301 (
ENST00000512664
)
(Conserved hypothetical protein.)
genome : 83,772,667 - 83,785,608 (12,942)
query : 1 - 710 (710/710)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 16.5, nucl 5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215833)
HIX0215833
HIT000609982 (
ENST00000510167
)
(Conserved hypothetical protein.)
genome : 83,774,784 - 83,785,751 (10,968)
query : 1 - 857 (857/857)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 12, mito 5, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215833)
HIX0215833
HIT000603530 (
ENST00000503226
)
(Conserved hypothetical protein.)
genome : 83,776,059 - 83,779,151 (3,093)
query : 1 - 613 (613/613)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 11.5, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215833)
HIX0215833
HIT000612360 (
ENST00000512732
)
(Conserved hypothetical protein.)
genome : 83,776,103 - 83,782,999 (6,897)
query : 1 - 551 (551/551)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 14.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215833)
HIX0215904
HIT000607789 (
ENST00000507816
)
(Conserved hypothetical protein.)
genome : 83,795,851 - 83,812,358 (16,508)
query : 1 - 546 (546/546)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 11.5, nucl 6.5, extr 5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215904)
HIX0215904
HIT000613832 (
ENST00000514326
)
(WD40-repeat-containing domain containing protein.)
genome : 83,796,880 - 83,812,248 (15,369)
query : 1 - 847 (847/847)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 14.5, nucl 3, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215904)
HIX0215904
HIT000612903 (
ENST00000513323
)
(WD40-repeat-containing domain containing protein.)
genome : 83,796,884 - 83,812,171 (15,288)
query : 1 - 822 (822/822)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 14, nucl 3, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215904)
HIX0215904
HIT000611662 (
ENST00000511975
)
(WD40-repeat-containing domain containing protein.)
genome : 83,796,925 - 83,812,331 (15,407)
query : 1 - 564 (564/564)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 14, nucl 3, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215904)
HIX0215904
HIT000607337 (
ENST00000507340
)
(Conserved hypothetical protein.)
genome : 83,796,938 - 83,812,393 (15,456)
query : 1 - 587 (587/587)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 13.5, cyto 10.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215904)
HIX0215904
HIT000607837 (
ENST00000507867
)
(Conserved hypothetical protein.)
genome : 83,798,642 - 83,812,331 (13,690)
query : 1 - 682 (682/682)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 12.5, nucl 9.5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215904)
HIX0215904
HIT000606561 (
ENST00000506497
)
(WD40-repeat-containing domain containing protein.)
genome : 83,798,710 - 83,812,286 (13,577)
query : 1 - 926 (926/926)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 15.5, nucl 3, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215904)
HIX0215904
HIT000610115 (
ENST00000510310
)
(Conserved hypothetical protein.)
genome : 83,799,929 - 83,812,414 (12,486)
query : 1 - 584 (584/584)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 6.5, mito 6, cyto 5.5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215904)
HIX0215904
HIT000603515 (
ENST00000503210
)
(Conserved hypothetical protein.)
genome : 83,800,041 - 83,822,319 (22,279)
query : 1 - 553 (553/553)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, nucl 8, cyto_mito 8, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215904)
HIX0215904
HIT000605567 (
ENST00000505434
)
(Conserved hypothetical protein.)
genome : 83,801,957 - 83,812,255 (10,299)
query : 1 - 569 (569/569)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, cyto 12.5, nucl 11.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215904)
HIX0215904
HIT000607657 (
ENST00000507676
)
(Conserved hypothetical protein.)
genome : 83,801,960 - 83,821,691 (19,732)
query : 1 - 551 (551/551)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.5, nucl 11, cyto 10, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215904)
HIX0215904
HIT000606559 (
ENST00000506495
)
(Conserved hypothetical protein.)
genome : 83,803,010 - 83,821,722 (18,713)
query : 1 - 541 (541/541)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215904)
HIX0215904
HIT000607073 (
ENST00000507051
)
(Hypothetical short protein.)
genome : 83,803,055 - 83,821,722 (18,668)
query : 1 - 458 (458/458)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto_nucl 6.5, nucl 5.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215904)
HIX0215904
HIT000659212 (
NR_034075
)
(Conserved hypothetical protein.)
genome : 83,814,605 - 83,822,069 (7,465)
query : 1 - 2,308 (2,308/2,318)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 12.5, nucl 7.5, mito 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215904)
HIX0215904
HIT000659213 (
NR_034076
)
(Conserved hypothetical protein.)
genome : 83,814,605 - 83,822,069 (7,465)
query : 1 - 2,283 (2,283/2,293)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 12.5, nucl 7.5, mito 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215904)
HIX0215904
HIT000659214 (
NR_034077
)
(Conserved hypothetical protein.)
genome : 83,814,605 - 83,822,069 (7,465)
query : 1 - 2,209 (2,209/2,219)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 12.5, nucl 7.5, mito 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215904)
HIX0215904
HIT000604729 (
ENST00000504520
)
(Conserved hypothetical protein.)
genome : 83,814,639 - 83,822,113 (7,475)
query : 1 - 2,293 (2,293/2,293)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 12.5, nucl 7.5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215904)
HIX0215904
HIT000090224
(
BC020725
)
Representative transcript
(Conserved hypothetical protein.)
genome : 83,814,712 - 83,821,700 (6,989)
query : 1 - 1,805 (1,805/1,834)
5 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 12.5, cyto 10.5, mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215904)
HIX0215904
HIT000098152
(
BC045722
)
(Conserved hypothetical protein.)
genome : 83,814,703 - 83,821,661 (6,959)
query : 1 - 2,570 (2,570/2,587)
4 exons
identity = 0.998
3'(0.998;1.000;0.993;1.000)5'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, cyto 6, nucl 2, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215904)
HIX0215904
HIT000261155
(
BC063702
)
(Conserved hypothetical protein.)
genome : 83,814,701 - 83,821,632 (6,932)
query : 1 - 1,748 (1,748/1,762)
5 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 12.5, cyto 9.5, mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215904)
HIX0215904
HIT000089004
(
BC016510
)
(Conserved hypothetical protein.)
genome : 83,814,701 - 83,815,920 (1,220)
query : 1 - 1,218 (1,218/1,232)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 12.5, cyto 9.5, mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215904)
HIX0215904
HIT000604969 (
ENST00000504792
)
(Conserved hypothetical protein.)
genome : 83,814,690 - 83,821,661 (6,972)
query : 1 - 2,585 (2,585/2,585)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 12.5, nucl 7.5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215904)
HIX0215904
HIT000076026
(
AF278605
)
(Conserved hypothetical protein.)
genome : 83,814,695 - 83,816,329 (1,635)
query : 2 - 1,636 (1,635/1,641)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 12.5, cyto 9.5, mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215904)
HIX0120160
HIT000047920
(
AK128047
)
Representative transcript
(Conserved hypothetical protein.)
genome : 83,814,702 - 83,819,054 (4,353)
query : 1 - 4,351 (4,351/4,352)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.3333, cyto 11.5, nucl 11, extr 9,
cyto_pero 7.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0120160)
HIX0215904
HIT000612547 (
ENST00000512932
)
(Conserved hypothetical protein.)
genome : 83,815,403 - 83,821,712 (6,310)
query : 1 - 971 (971/971)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 12.5, nucl 7.5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215904)
HIX0215904
HIT000610997 (
ENST00000511271
)
(Hypothetical short protein.)
genome : 83,815,948 - 83,821,719 (5,772)
query : 1 - 516 (516/516)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215904)
HIX0215904
HIT000608683 (
ENST00000508772
)
(Hypothetical short protein.)
genome : 83,816,844 - 83,821,722 (4,879)
query : 1 - 566 (566/566)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215904)
HIX0120160
HIT000048466
(
AK128593
)
(Conserved hypothetical protein.)
genome : 83,817,006 - 83,820,460 (3,455)
query : 1 - 3,457 (3,457/3,457)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.3333, cyto 11.5, nucl 11, extr 9,
cyto_pero 7.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0120160)
HIX0215904
HIT000613139 (
ENST00000513581
)
(Hypothetical short protein.)
genome : 83,818,916 - 83,821,722 (2,807)
query : 1 - 683 (683/683)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215904)
HIX0215904
HIT000604899 (
ENST00000504718
)
(Hypothetical short protein.)
genome : 83,818,946 - 83,821,655 (2,710)
query : 1 - 573 (573/573)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto_nucl 6.5, nucl 5.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215904)
HIX0215904
HIT000605188 (
ENST00000505028
)
(Hypothetical short protein.)
genome : 83,819,009 - 83,821,722 (2,714)
query : 1 - 552 (552/552)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto_nucl 6.5, nucl 5.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215904)
HIX0215904
HIT000607642 (
ENST00000507660
)
(Hypothetical short protein.)
genome : 83,819,076 - 83,821,724 (2,649)
query : 1 - 550 (550/550)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215904)
HIX0215904
HIT000608899 (
ENST00000509007
)
(Hypothetical short protein.)
genome : 83,820,698 - 83,821,712 (1,015)
query : 1 - 566 (566/566)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215904)
HIX0215904
HIT000605039 (
ENST00000504869
)
(Hypothetical short protein.)
genome : 83,820,846 - 83,821,719 (874)
query : 1 - 535 (535/535)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, extr 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215904)
HIX0215904
HIT000603975 (
ENST00000503704
)
(Hypothetical short protein.)
genome : 83,820,976 - 83,821,722 (747)
query : 1 - 637 (637/637)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215904)
HIX0004338
HIT000209374 (
NM_024672
)
(DNA transposase THAP9; EC=2.7.7.-; THAP domain-containing protein 9; hTh9;)
genome : 83,821,837 - 83,841,284 (19,448)
query : 1 - 4,038 (4,038/4,038)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.7.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 14.5, cyto 5, mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004338)
HIX0004338
HIT000613935 (
ENST00000514440
)
(DNA transposase THAP9.)
genome : 83,821,837 - 83,825,977 (4,141)
query : 1 - 553 (553/553)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto_nucl 3.66667, nucl 3.5, mito 3,
cyto_pero 2.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004338)
HIX0004338
HIT000613757 (
ENST00000514244
)
(DNA transposase THAP9.)
genome : 83,821,856 - 83,829,068 (7,213)
query : 1 - 821 (821/821)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, mito 10, nucl 6.5, cyto_nucl 4.5, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004338)
HIX0004338
HIT000116094 (
ENST00000302236
)
(DNA transposase THAP9; EC=2.7.7.-; THAP domain-containing protein 9; hTh9;)
genome : 83,821,905 - 83,841,122 (19,218)
query : 1 - 3,808 (3,808/3,808)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.7.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 14.5, cyto 5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004338)
HIX0004338
HIT000016279
(
AK091412
)
Representative transcript
(DNA transposase THAP9; EC=2.7.7.-; THAP domain-containing protein 9; hTh9;)
genome : 83,821,906 - 83,841,438 (19,533)
query : 1 - 3,627 (3,627/3,627)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.998;0.997)3'
coverage = 1.000
EC number :
EC 2.7.7.-
InterPro :
IPR006612 : Zinc finger, C2CH-type
GO :
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 15, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004338)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : BC118121
Pongo
sp. (Orangutan) : ENSPPYT00000017303
Pan
sp. (Chimpanzee) : ENSPTRT00000030197
Macaca
sp. (Macaque) : XM_001086766
Equus
sp. (Horse) : XM_001915481
Gallus
sp. (Chicken) : XM_420555
Canis
sp. (Dog) : XM_544956
HIX0004338
HIT000609222 (
ENST00000509353
)
(DNA transposase THAP9.)
genome : 83,821,919 - 83,827,780 (5,862)
query : 1 - 693 (693/700)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.990
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, nucl 8.5, mito 8, cyto_nucl 6, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004338)
HIX0004338
HIT000390624
(
BC131722
)
(DNA transposase THAP9.)
genome : 83,821,922 - 83,840,613 (18,692)
query : 1 - 3,348 (3,348/3,348)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR006612 : Zinc finger, C2CH-type
GO :
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, nucl 8.5, extr 6, cyto_nucl 6, mito_pero 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004338)
HIX0004338
HIT000606002 (
ENST00000505901
)
(DNA transposase THAP9.)
genome : 83,821,922 - 83,840,613 (18,692)
query : 1 - 3,348 (3,348/3,348)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, nucl 8.5, extr 6, cyto_nucl 6, mito_pero 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004338)
HIX0004338
HIT000056781
(
BX648134
)
(DNA transposase THAP9.)
genome : 83,822,167 - 83,841,120 (18,954)
query : 1 - 4,129 (4,129/4,140)
6 exons
identity = 0.996
5'(0.988;0.980;0.997;1.000;1.000;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 6, mito 4, golg 3, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004338)
HIX0004338
HIT000606286 (
ENST00000506208
)
(DNA transposase THAP9.)
genome : 83,827,579 - 83,838,193 (10,615)
query : 1 - 565 (565/565)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, cyto_nucl 11, cyto 8, extr 5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004338)
HIX0004338
HIT000384463
(
AK225333
)
(DNA transposase THAP9.)
genome : 83,827,711 - 83,840,176 (12,466)
query : 1 - 2,301 (2,301/2,342)
3 exons
identity = 0.998
5'(1.000;1.000;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18.5, cyto 16.5, nucl 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004338)
HIX0004338
HIT000010247
(
AK026973
)
(DNA transposase THAP9.)
genome : 83,827,721 - 83,840,176 (12,456)
query : 4 - 2,294 (2,291/2,337)
3 exons
identity = 0.998
5'(1.000;1.000;0.998)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 16, nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004338)
HIX0024607
HIT000606006 (
ENST00000505905
)
(Protein lin-54 homolog isoform b.)
genome : 83,831,126 - 83,849,351 (18,226)
query : 1 - 810 (810/810)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024607)
HIX0024607
HIT000486012 (
NM_001115007
)
(Protein lin-54 homolog isoform b.)
genome : 83,845,756 - 83,934,040 (88,285)
query : 1 - 5,214 (5,214/5,214)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.992;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14.5, nucl 13.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024607)
HIX0024607
HIT000133047 (
ENST00000340417
)
(Protein lin-54 homolog; CXC domain-containing protein 1;)
genome : 83,845,756 - 83,931,982 (86,227)
query : 1 - 6,127 (6,127/6,127)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto 11, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024607)
HIX0024607
HIT000319027 (
NM_194282
)
(Protein lin-54 homolog; CXC domain-containing protein 1;)
genome : 83,845,756 - 83,931,982 (86,227)
query : 1 - 6,127 (6,127/6,127)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.992;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto 11, pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024607)
HIX0024607
HIT000486013 (
NM_001115008
)
(Protein lin-54 homolog isoform b.)
genome : 83,845,756 - 83,931,982 (86,227)
query : 1 - 5,464 (5,464/5,464)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.992;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14.5, nucl 13.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024607)
HIX0024607
HIT000478665 (
ENST00000395282
)
(Protein lin-54 homolog isoform a.)
genome : 83,845,756 - 83,905,997 (60,242)
query : 1 - 5,625 (5,625/5,625)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024607)
HIX0024607
HIT000478666 (
ENST00000395283
)
(Protein lin-54 homolog isoform a.)
genome : 83,845,756 - 83,905,997 (60,242)
query : 1 - 5,482 (5,482/5,482)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 12.5, cyto 10.5, pero 3, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024607)
HIX0024607
HIT000055510
(
BX640966
)
Representative transcript
(Protein lin-54 homolog; CXC domain-containing protein 1;)
genome : 83,846,127 - 83,931,982 (85,856)
query : 1 - 5,755 (5,755/5,772)
13 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000;1.000;0.995;
1.000;1.000;1.000;0.992;0.999;1.000)5'
coverage = 1.000
InterPro :
IPR005172 : CRC domain
IPR028307 : Lin-54 family
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 14.5, nucl 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024607)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK029288
Rattus
sp. (Rat) : BC082043
Danio
sp. (Zebrafish) : BC124175
Pongo
sp. (Orangutan) : CR858600
Macaca
sp. (Macaque) : ENSMMUT00000011900
Monodelphis
sp. (Opossum) : ENSMODT00000024534
Oryzias
sp. (Medaka) : ENSORLT00000002373
Tetraodon
sp. (Tetraodon) : GSTENT00025255001
Takifugu
sp. (Fugu) : SINFRUT00000136527
Pan
sp. (Chimpanzee) : XM_001137516
Equus
sp. (Horse) : XM_001494255
Gallus
sp. (Chicken) : XM_420554
Canis
sp. (Dog) : XM_535631
Bos
sp. (Cow) : XM_603026
HIX0024607
HIT000242331
(
AB111889
)
(Protein lin-54 homolog isoform b.)
genome : 83,846,701 - 83,931,974 (85,274)
query : 1 - 4,506 (4,506/4,506)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.992;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR028307 : Lin-54 family
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, mito 10, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024607)
HIX0024607
HIT000610628 (
ENST00000510877
)
(Protein lin-54 homolog isoform b.)
genome : 83,846,701 - 83,931,974 (85,274)
query : 1 - 4,507 (4,507/4,507)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, mito 10, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024607)
HIX0024607
HIT000054703
(
BX537919
)
(Protein lin-54 homolog isoform b.)
genome : 83,846,873 - 83,931,884 (85,012)
query : 1 - 4,244 (4,244/4,313)
13 exons
identity = 0.997
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.984;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR005172 : CRC domain
IPR028307 : Lin-54 family
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14.5, nucl 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024607)
HIX0024607
HIT000055206
(
BX640657
)
(Protein lin-54 homolog isoform b.)
genome : 83,846,873 - 83,931,976 (85,104)
query : 1 - 4,076 (4,076/4,133)
13 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.992;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR005172 : CRC domain
IPR028307 : Lin-54 family
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14.5, nucl 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024607)
HIX0024607
HIT000544785 (
ENST00000446851
)
(Protein lin-54 homolog isoform b.)
genome : 83,846,868 - 83,931,976 (85,109)
query : 1 - 4,083 (4,083/4,083)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14.5, nucl 13.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024607)
HIX0024607
HIT000540395 (
ENST00000442461
)
(Protein lin-54 homolog isoform b.)
genome : 83,846,868 - 83,931,884 (85,017)
query : 1 - 4,254 (4,254/4,254)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14.5, nucl 13.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024607)
HIX0024607
HIT000425566
(
AK292769
)
(Protein lin-54 homolog isoform b.)
genome : 83,848,713 - 83,934,040 (85,328)
query : 3 - 2,255 (2,253/2,255)
13 exons
identity = 0.997
3'(0.992;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.992;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR005172 : CRC domain
IPR028307 : Lin-54 family
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14.5, nucl 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024607)
HIX0024607
HIT000610341 (
ENST00000510557
)
(Protein lin-54 homolog isoform b.)
genome : 83,848,713 - 83,934,040 (85,328)
query : 1 - 2,257 (2,257/2,257)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14.5, nucl 13.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024607)
HIX0024607
HIT000339374
(
BC109277
)
(Protein lin-54 homolog; CXC domain-containing protein 1;)
genome : 83,848,739 - 83,931,863 (83,125)
query : 1 - 2,684 (2,684/2,684)
11 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR028307 : Lin-54 family
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024607)
HIX0024607
HIT000608118 (
ENST00000508171
)
(Protein lin-54 homolog; CXC domain-containing protein 1;)
genome : 83,848,739 - 83,931,863 (83,125)
query : 1 - 2,684 (2,684/2,684)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024607)
HIX0024607
HIT000339375
(
BC109278
)
(Protein lin-54 homolog isoform a.)
genome : 83,848,739 - 83,931,862 (83,124)
query : 1 - 2,757 (2,757/2,757)
11 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR005172 : CRC domain
IPR028307 : Lin-54 family
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 12.5, cyto 10.5, pero 3, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024607)
HIX0024607
HIT000606621 (
ENST00000506560
)
(Protein lin-54 homolog isoform a.)
genome : 83,848,739 - 83,931,862 (83,124)
query : 1 - 2,757 (2,757/2,757)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 12.5, cyto 10.5, pero 3, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024607)
HIX0024607
HIT000494411
(
AK299787
)
(Protein lin-54 homolog isoform b.)
genome : 83,848,878 - 83,867,503 (18,626)
query : 1 - 1,552 (1,552/1,552)
9 exons
identity = 0.997
3'(0.993;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR005172 : CRC domain
IPR028307 : Lin-54 family
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20.5, cyto_mito 13.5, cyto_nucl 7.33333,
nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024607)
HIX0024607
HIT000605534 (
ENST00000505397
)
(Protein lin-54 homolog; CXC domain-containing protein 1;)
genome : 83,848,930 - 83,934,079 (85,150)
query : 1 - 2,742 (2,742/2,742)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto 11, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024607)
HIX0024607
HIT000488880
(
AK294256
)
(Protein lin-54 homolog isoform a.)
genome : 83,849,378 - 83,931,916 (82,539)
query : 1 - 2,439 (2,439/2,439)
13 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.992;0.999;1.000)5'
coverage = 1.000
InterPro :
IPR005172 : CRC domain
IPR028307 : Lin-54 family
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto 12, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024607)
HIX0024607
HIT000609596 (
ENST00000509748
)
(Protein lin-54 homolog isoform a.)
genome : 83,905,315 - 83,934,064 (28,750)
query : 1 - 729 (729/729)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 13, extr 4, nucl 2, mito 2, cysk 2,
extr_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024607)
HIX0206091
HIT000615468 (
ENST00000516065
)
(Hypothetical short protein.)
genome : 83,924,565 - 83,924,670 (106)
query : 1 - 106 (106/106)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206091)
HIX0004339
HIT000019093
(
AK094238
)
(COP9 signalosome complex subunit 4; SGN4; Signalosome subunit 4; JAB1-containing signalosome subunit 4;)
genome : 83,955,600 - 83,996,942 (41,343)
query : 1 - 2,272 (2,272/2,272)
9 exons
identity = 0.999
5'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000717 : Proteasome component (PCI) domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 13.5, nucl 5.5, pero 4, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004339)
HIX0004339
HIT000608979 (
ENST00000509093
)
(COP9 signalosome complex subunit 4; SGN4; Signalosome subunit 4; JAB1-containing signalosome subunit 4;)
genome : 83,955,600 - 83,996,942 (41,343)
query : 1 - 2,273 (2,273/2,273)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 13.5, nucl 5.5, pero 4, cysk 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004339)
HIX0004339
HIT000205893 (
NM_016129
)
(COP9 signalosome complex subunit 4; SGN4; Signalosome subunit 4; JAB1-containing signalosome subunit 4;)
genome : 83,956,239 - 83,996,971 (40,733)
query : 1 - 1,748 (1,748/1,765)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 11.5, pero 5, cysk 4, nucl 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004339)
HIX0004339
HIT000724092 (
NM_001258006
)
(COP9 signalosome complex subunit 4; SGN4; Signalosome subunit 4; JAB1-containing signalosome subunit 4;)
genome : 83,956,239 - 83,996,971 (40,733)
query : 1 - 1,663 (1,663/1,680)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 13.5, nucl 5.5, pero 4, cysk 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004339)
HIX0004339
HIT000109292 (
ENST00000264389
)
(COP9 signalosome complex subunit 4; SGN4; Signalosome subunit 4; JAB1-containing signalosome subunit 4;)
genome : 83,956,243 - 83,996,971 (40,729)
query : 1 - 1,744 (1,744/1,744)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 11.5, pero 5, cysk 4, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004339)
HIX0004339
HIT000003622
(
AK001148
)
(COP9 signalosome complex subunit 4; SGN4; Signalosome subunit 4; JAB1-containing signalosome subunit 4;)
genome : 83,956,243 - 83,996,942 (40,700)
query : 1 - 1,715 (1,715/1,715)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.991;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 11.5, cyto_pero 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004339)
HIX0004339
HIT000611583 (
ENST00000511891
)
(COP9 signalosome complex subunit 4; SGN4; Signalosome subunit 4; JAB1-containing signalosome subunit 4;)
genome : 83,956,324 - 83,970,668 (14,345)
query : 1 - 558 (558/558)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 19.5, cyto 17, nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004339)
HIX0004339
HIT000609188 (
ENST00000509317
)
(COP9 signalosome complex subunit 4; SGN4; Signalosome subunit 4; JAB1-containing signalosome subunit 4;)
genome : 83,956,326 - 83,996,524 (40,199)
query : 1 - 878 (878/878)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14.1667, cyto_plas 10.5, nucl 5,
pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004339)
HIX0004339
HIT000610556 (
ENST00000510801
)
(COP9 signalosome complex subunit 4; Dch4; Signalosome subunit 4;)
genome : 83,956,327 - 83,971,137 (14,811)
query : 1 - 381 (381/381)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, cyto 15.5, nucl 8.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004339)
HIX0004339
HIT000606507 (
ENST00000506443
)
(COP9 signalosome complex subunit 4; SGN4; Signalosome subunit 4; JAB1-containing signalosome subunit 4;)
genome : 83,956,352 - 83,978,215 (21,864)
query : 1 - 578 (578/578)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 19, cyto 14.5, nucl 10.5, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004339)
HIX0004339
HIT000334498
(
BC093007
)
(COP9 signalosome complex subunit 4; SGN4; Signalosome subunit 4; JAB1-containing signalosome subunit 4;)
genome : 83,956,354 - 83,996,943 (40,590)
query : 1 - 1,605 (1,605/1,620)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR000717 : Proteasome component (PCI) domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 11.5, pero 5, cysk 4, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004339)
HIX0004339
HIT000007279
(
AK024005
)
(COP9 signalosome complex subunit 4; SGN4; Signalosome subunit 4; JAB1-containing signalosome subunit 4;)
genome : 83,956,354 - 83,996,942 (40,589)
query : 1 - 1,604 (1,604/1,604)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000717 : Proteasome component (PCI) domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 11.5, pero 5, cysk 4, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004339)
HIX0004339
HIT000607373 (
ENST00000507376
)
(COP9 signalosome complex subunit 4; SGN4; Signalosome subunit 4; JAB1-containing signalosome subunit 4;)
genome : 83,956,354 - 83,971,112 (14,759)
query : 1 - 438 (438/438)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15, cyto_nucl 15, nucl 9, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004339)
HIX0004339
HIT000603954 (
ENST00000503682
)
(COP9 signalosome complex subunit 4; SGN4; Signalosome subunit 4; JAB1-containing signalosome subunit 4;)
genome : 83,956,360 - 83,996,950 (40,591)
query : 1 - 1,702 (1,702/1,702)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 12, cysk 5, nucl 3.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004339)
HIX0004339
HIT000330958
(
AK223178
)
(COP9 signalosome complex subunit 4; SGN4; Signalosome subunit 4; JAB1-containing signalosome subunit 4;)
genome : 83,956,369 - 83,996,869 (40,501)
query : 1 - 1,516 (1,516/1,516)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.993;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000717 : Proteasome component (PCI) domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 11.5, pero 5, nucl 3.5,
mito_pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004339)
HIX0004339
HIT000001860
(
AF100757
)
(COP9 signalosome complex subunit 4; SGN4; Signalosome subunit 4; JAB1-containing signalosome subunit 4;)
genome : 83,956,372 - 83,996,943 (40,572)
query : 1 - 1,584 (1,584/1,613)
10 exons
identity = 0.998
5'(0.962;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 12.5, pero 3, nucl 2.5,
mito_pero 2.5, extr 2, mito 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004339)
HIX0004339
HIT000034261
(
BC009292
)
Representative transcript
(COP9 signalosome complex subunit 4; SGN4; Signalosome subunit 4; JAB1-containing signalosome subunit 4;)
genome : 83,956,376 - 83,996,971 (40,596)
query : 1 - 1,611 (1,611/1,628)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000717 : Proteasome component (PCI) domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 11.5, pero 5, cysk 4, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004339)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB169597
Gallus
sp. (Chicken) : AJ720334
Mus
sp. (Mouse) : AK167833
Danio
sp. (Zebrafish) : BC065617
Rattus
sp. (Rat) : BC079384
Bos
sp. (Cow) : BC103017
Pongo
sp. (Orangutan) : CR860648
Oryzias
sp. (Medaka) : ENSORLT00000002398
Tetraodon
sp. (Tetraodon) : GSTENT00025252001
Takifugu
sp. (Fugu) : SINFRUT00000136528
Pan
sp. (Chimpanzee) : XM_001137028
Monodelphis
sp. (Opossum) : XM_001366121
Equus
sp. (Horse) : XM_001494333
Canis
sp. (Dog) : XM_535632
HIX0004339
HIT000031853
(
BC004302
)
(COP9 signalosome complex subunit 4; SGN4; Signalosome subunit 4; JAB1-containing signalosome subunit 4;)
genome : 83,956,376 - 83,996,943 (40,568)
query : 1 - 1,583 (1,583/1,605)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000717 : Proteasome component (PCI) domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 11.5, pero 5, cysk 4, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004339)
HIX0004339
HIT000611357 (
ENST00000511653
)
(COP9 signalosome complex subunit 4; SGN4; Signalosome subunit 4; JAB1-containing signalosome subunit 4;)
genome : 83,956,378 - 83,996,909 (40,532)
query : 1 - 1,695 (1,695/1,695)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 12, mito 4.5, E.R._mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004339)
HIX0004339
HIT000003684
(
AK001210
)
(COP9 signalosome complex subunit 4; SGN4; Signalosome subunit 4; JAB1-containing signalosome subunit 4;)
genome : 83,956,412 - 83,996,970 (40,559)
query : 1 - 1,574 (1,574/1,574)
10 exons
identity = 0.999
5'(1.000;1.000;0.993;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 15.5, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004339)
HIX0004339
HIT000611408 (
ENST00000511708
)
(COP9 signalosome complex subunit 4; SGN4; Signalosome subunit 4; JAB1-containing signalosome subunit 4;)
genome : 83,956,583 - 83,970,460 (13,878)
query : 1 - 824 (824/824)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 13, mito 5, nucl 3, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004339)
HIX0004339
HIT000604505 (
ENST00000504274
)
(COP9 signalosome complex subunit 4; SGN4; Signalosome subunit 4; JAB1-containing signalosome subunit 4;)
genome : 83,984,128 - 83,989,659 (5,532)
query : 1 - 457 (457/457)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004339)
HIX0004340
HIT000002615
(
AK000140
)
Representative transcript
(Placenta-specific gene 8 protein; Protein C15;)
genome : 84,011,212 - 84,035,911 (24,700)
query : 1 - 1,386 (1,386/1,403)
5 exons
identity = 0.994
3'(0.991;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004340)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AJ422151
Bos
sp. (Cow) : BC102588
Pongo
sp. (Orangutan) : CR857521
Canis
sp. (Dog) : ENSCAFT00000014424
Danio
sp. (Zebrafish) : ENSDART00000101045
Equus
sp. (Horse) : ENSECAT00000015699
Macaca
sp. (Macaque) : ENSMMUT00000031386
Pan
sp. (Chimpanzee) : ENSPTRT00000030202
Rattus
sp. (Rat) : ENSRNOT00000003012
Takifugu
sp. (Fugu) : SINFRUT00000136529
Gallus
sp. (Chicken) : XM_001234102
Monodelphis
sp. (Opossum) : XM_001376884
Monodelphis
sp. (Opossum) : XM_001376909
HIX0004340
HIT000119084 (
ENST00000311507
)
(Placenta-specific gene 8 protein; Protein C15;)
genome : 84,011,212 - 84,035,955 (24,744)
query : 1 - 1,436 (1,436/1,447)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004340)
HIX0004340
HIT000206287 (
NM_016619
)
(Placenta-specific gene 8 protein; Protein C15;)
genome : 84,011,212 - 84,035,911 (24,700)
query : 1 - 1,392 (1,392/1,403)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004340)
HIX0004340
HIT000559760 (
NM_001130716
)
(Placenta-specific gene 8 protein; Protein C15;)
genome : 84,011,212 - 84,031,012 (19,801)
query : 1 - 1,431 (1,431/1,442)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004340)
HIX0004340
HIT000002242
(
AF208846
)
(Placenta-specific gene 8 protein; Protein C15;)
genome : 84,011,842 - 84,035,889 (24,048)
query : 2 - 736 (735/760)
5 exons
identity = 0.991
3'(0.975;1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004340)
HIX0004340
HIT000035734
(
BC012205
)
(Uncharacterised protein family Cys-rich protein.)
genome : 84,011,844 - 84,030,996 (19,153)
query : 1 - 777 (777/792)
5 exons
identity = 0.976
3'(0.979;0.939;0.992;0.973;0.991)5'
coverage = 1.000
InterPro :
IPR006461 : Uncharacterised protein family Cys-rich
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004340)
HIX0004340
HIT000509350 (
ENST00000411416
)
(Placenta-specific gene 8 protein; Protein C15;)
genome : 84,011,841 - 84,030,996 (19,156)
query : 1 - 786 (786/786)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004340)
HIX0004340
HIT000247913
(
AJ422147
)
(Placenta-specific gene 8 protein; Protein C15;)
genome : 84,011,851 - 84,035,893 (24,043)
query : 1 - 728 (728/728)
5 exons
identity = 0.990
3'(0.978;1.000;1.000;1.000;0.987)5'
coverage = 1.000
InterPro :
IPR006461 : Uncharacterised protein family Cys-rich
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004340)
HIX0004340
HIT000485035
(
EU570985
)
(Placenta-specific gene 8 protein.)
genome : 84,011,946 - 84,035,889 (23,944)
query : 2 - 365 (364/365)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.997
InterPro :
IPR006461 : Uncharacterised protein family Cys-rich
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 8.5, cyto 7.5, extr_plas 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004340)
HIX0004340
HIT000485036
(
EU570986
)
(Placenta-specific gene 8 protein.)
genome : 84,011,946 - 84,035,889 (23,944)
query : 2 - 490 (489/490)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR006461 : Uncharacterised protein family Cys-rich
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10, cyto 9.5, extr 9, cyto_nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004340)
HIX0004340
HIT000609801 (
ENST00000509973
)
(Placenta-specific gene 8 protein.)
genome : 84,011,946 - 84,035,889 (23,944)
query : 1 - 489 (489/489)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10, cyto 9.5, extr 9, cyto_nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004340)
HIX0004340
HIT000614825 (
ENST00000515389
)
(Placenta-specific gene 8 protein.)
genome : 84,011,946 - 84,035,889 (23,944)
query : 1 - 364 (364/364)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 4.5, cyto_nucl 4, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004340)
HIX0004340
HIT000605543 (
ENST00000505406
)
(Placenta-specific gene 8 protein; Protein C15;)
genome : 84,011,959 - 84,058,228 (46,270)
query : 1 - 1,025 (1,025/1,025)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004340)
HIX0004340
HIT000524857 (
ENST00000426923
)
(Placenta-specific gene 8 protein; Protein C15;)
genome : 84,014,014 - 84,035,868 (21,855)
query : 1 - 2,253 (2,253/2,253)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004340)
HIX0004340
HIT000559759 (
NM_001130715
)
(Placenta-specific gene 8 protein; Protein C15;)
genome : 84,015,307 - 84,035,911 (20,605)
query : 1 - 1,003 (1,003/1,003)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004340)
HIX0004340
HIT000558921
(
FJ795024
)
(Placenta-specific gene 8 protein; Protein C15;)
genome : 84,015,840 - 84,029,074 (13,235)
query : 1 - 348 (348/348)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR006461 : Uncharacterised protein family Cys-rich
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004340)
HIX0004340
HIT000558982
(
FJ882405
)
(Placenta-specific gene 8 protein; Protein C15;)
genome : 84,015,841 - 84,029,074 (13,234)
query : 1 - 347 (347/347)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR006461 : Uncharacterised protein family Cys-rich
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004340)
HIX0004337
HIT000306871
(
CR933696
)
(Protein transport protein Sec31A isoform 4.)
genome : 83,739,814 - 83,812,306 (72,493)
query : 1 - 3,687 (3,687/3,826)
24 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.993;0.994;1.000;0.993;0.993;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 14, nucl 3, E.R. 3, pero 2,
E.R._mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004337)
HIX0004337
HIT000092350
(
BC031292
)
(Protein transport protein Sec31A isoform 3.)
genome : 83,739,814 - 83,812,291 (72,478)
query : 1 - 4,127 (4,127/4,172)
27 exons
identity = 0.998
3'(0.995;1.000;0.992;1.000;1.000;1.000;0.992;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.994;1.000;1.000;
0.993;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 16, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004337)
HIX0004337
HIT000205957 (
NM_016211
)
(Protein transport protein Sec31A; ABP125; ABP130; SEC31-like protein 1; SEC31-related protein A; Web1-like protein;)
genome : 83,739,814 - 83,812,412 (72,599)
query : 1 - 4,135 (4,135/4,153)
25 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.994;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 16, cyto 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004337)
HIX0004337
HIT000655752 (
NM_001191049
)
(Protein transport protein Sec31A isoform 5.)
genome : 83,739,814 - 83,812,335 (72,522)
query : 1 - 4,047 (4,047/4,065)
26 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.994;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 15, cyto 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004337)
HIX0004337
HIT000385064
(
AK225934
)
(Protein transport protein Sec31A isoform 3.)
genome : 83,739,814 - 83,812,293 (72,480)
query : 1 - 4,132 (4,132/4,150)
27 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.994;1.000;1.000;
1.000;1.000;1.000;1.000;0.994;1.000;1.000;
1.000;0.990;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 14, nucl 3, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004337)
HIX0004337
HIT000205212 (
NM_014933
)
(Protein transport protein Sec31A; ABP125; ABP130; SEC31-like protein 1; SEC31-related protein A; Web1-like protein;)
genome : 83,739,814 - 83,812,419 (72,606)
query : 1 - 4,256 (4,256/4,273)
27 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.994;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 16.5, cyto 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004337)
HIX0004337
HIT000397759 (
NM_001077206
)
(Protein transport protein Sec31A isoform 4.)
genome : 83,739,814 - 83,812,412 (72,599)
query : 1 - 3,910 (3,910/3,927)
26 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.994;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 17.5, cyto 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004337)
HIX0004337
HIT000397760 (
NM_001077207
)
(Protein transport protein Sec31A; ABP125; ABP130; SEC31-like protein 1; SEC31-related protein A; Web1-like protein;)
genome : 83,739,814 - 83,812,412 (72,599)
query : 1 - 4,252 (4,252/4,269)
27 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.994;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 16.5, cyto 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004337)
HIX0004337
HIT000397761 (
NM_001077208
)
(Protein transport protein Sec31A; ABP125; ABP130; SEC31-like protein 1; SEC31-related protein A; Web1-like protein;)
genome : 83,739,814 - 83,812,412 (72,599)
query : 1 - 4,207 (4,207/4,224)
27 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.994;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 17, cyto 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004337)
HIX0004337
HIT000478692 (
ENST00000395310
)
(Protein transport protein Sec31A; ABP125; ABP130; SEC31-like protein 1; SEC31-related protein A; Web1-like protein;)
genome : 83,739,814 - 83,812,419 (72,606)
query : 1 - 4,259 (4,259/4,259)
27 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 16.5, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004337)
HIX0004337
HIT000613399 (
ENST00000513858
)
(Protein transport protein Sec31A isoform 4.)
genome : 83,739,814 - 83,812,306 (72,493)
query : 1 - 3,687 (3,687/3,687)
24 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 17.5, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004337)
HIX0004337
HIT000307618 (
ENST00000348405
)
(Protein transport protein Sec31A; ABP125; ABP130; SEC31-like protein 1; SEC31-related protein A; Web1-like protein;)
genome : 83,739,814 - 83,812,289 (72,476)
query : 1 - 4,012 (4,012/4,012)
25 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 16, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004337)
HIX0004337
HIT000119173 (
ENST00000311785
)
(Protein transport protein Sec31A isoform 4.)
genome : 83,739,815 - 83,812,400 (72,586)
query : 1 - 3,897 (3,897/3,897)
26 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 17.5, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004337)
HIX0004337
HIT000124783 (
ENST00000326950
)
(Protein transport protein Sec31A; ABP125; ABP130; SEC31-like protein 1; SEC31-related protein A; Web1-like protein;)
genome : 83,739,815 - 83,812,400 (72,586)
query : 1 - 4,119 (4,119/4,119)
25 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 16, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004337)
HIX0004337
HIT000530728 (
ENST00000432794
)
(Protein transport protein Sec31A; ABP125; ABP130; SEC31-like protein 1; SEC31-related protein A; Web1-like protein;)
genome : 83,739,815 - 83,812,400 (72,586)
query : 1 - 4,278 (4,278/4,278)
28 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 16.5, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004337)
HIX0004337
HIT000546257 (
ENST00000448323
)
(Protein transport protein Sec31A; ABP125; ABP130; SEC31-like protein 1; SEC31-related protein A; Web1-like protein;)
genome : 83,739,815 - 83,812,400 (72,586)
query : 1 - 4,236 (4,236/4,236)
27 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 16.5, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004337)
HIX0004337
HIT000609023 (
ENST00000509142
)
(Protein transport protein Sec31A isoform 4.)
genome : 83,739,815 - 83,812,367 (72,553)
query : 1 - 3,861 (3,861/3,861)
26 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 17.5, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004337)
HIX0004337
HIT000490434
(
AK295810
)
(Protein transport protein Sec31A; ABP125; ABP130; SEC31-like protein 1; SEC31-related protein A; Web1-like protein;)
genome : 83,739,815 - 83,812,331 (72,517)
query : 1 - 4,042 (4,042/4,042)
26 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.983;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.994;1.000;1.000;
0.993;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 15, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004337)
HIX0004337
HIT000541396 (
ENST00000443462
)
(Protein transport protein Sec31A isoform 5.)
genome : 83,739,815 - 83,812,331 (72,517)
query : 1 - 4,042 (4,042/4,042)
26 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 15, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004337)
HIX0004337
HIT000058551
(
AB018358
)
(Protein transport protein Sec31A; ABP125; ABP130; SEC31-like protein 1; SEC31-related protein A; Web1-like protein;)
genome : 83,739,815 - 83,812,289 (72,475)
query : 1 - 4,012 (4,012/4,012)
25 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;0.992;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.994;1.000;1.000;0.993;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 16, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004337)
HIX0004337
HIT000058552
(
AB018359
)
(Protein transport protein Sec31A; ABP125; ABP130; SEC31-like protein 1; SEC31-related protein A; Web1-like protein;)
genome : 83,739,815 - 83,812,289 (72,475)
query : 1 - 4,129 (4,129/4,129)
27 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;0.992;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.994;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 16, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004337)
HIX0004337
HIT000602379 (
ENST00000500777
)
(Protein transport protein Sec31A isoform 4.)
genome : 83,739,825 - 83,803,093 (63,269)
query : 1 - 3,610 (3,610/3,610)
23 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 17.5, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004337)
HIX0004337
HIT000605603 (
ENST00000505472
)
(Protein transport protein Sec31A; ABP125; ABP130; SEC31-like protein 1; SEC31-related protein A; Web1-like protein;)
genome : 83,739,825 - 83,803,090 (63,266)
query : 1 - 4,159 (4,159/4,159)
27 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 16, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004337)
HIX0004337
HIT000266091
(
BC084583
)
(Protein transport protein Sec31A isoform 4.)
genome : 83,740,174 - 83,812,272 (72,099)
query : 1 - 3,410 (3,410/3,428)
26 exons
identity = 0.999
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.994;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 17.5, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004337)
HIX0004337
HIT000000622
(
AB020712
)
Representative transcript
(Protein transport protein Sec31A; ABP125; ABP130; SEC31-like protein 1; SEC31-related protein A; Web1-like protein;)
genome : 83,740,174 - 83,821,691 (81,518)
query : 1 - 4,094 (4,094/4,110)
29 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.994;1.000;1.000;
0.993;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 16.5, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004337)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AF034582
Gallus
sp. (Chicken) : AJ851522
Mus
sp. (Mouse) : BC025831
Danio
sp. (Zebrafish) : BC054909
Pongo
sp. (Orangutan) : CR861295
Equus
sp. (Horse) : ENSECAT00000019300
Macaca
sp. (Macaque) : ENSMMUT00000011894
Monodelphis
sp. (Opossum) : ENSMODT00000015378
Oryzias
sp. (Medaka) : ENSORLT00000002336
Tetraodon
sp. (Tetraodon) : GSTENT00025256001
Takifugu
sp. (Fugu) : SINFRUT00000136524
Pan
sp. (Chimpanzee) : XM_001139030
Canis
sp. (Dog) : XM_535630
Bos
sp. (Cow) : XR_028006
HIX0004337
HIT000095911
(
BC039834
)
(Protein transport protein Sec31A; ABP125; ABP130; SEC31-like protein 1; SEC31-related protein A; Web1-like protein;)
genome : 83,740,174 - 83,812,356 (72,183)
query : 1 - 3,790 (3,790/3,805)
27 exons
identity = 0.999
3'(1.000;1.000;0.992;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.994;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 17, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004337)
HIX0004337
HIT000309373 (
ENST00000355196
)
(Protein transport protein Sec31A; ABP125; ABP130; SEC31-like protein 1; SEC31-related protein A; Web1-like protein;)
genome : 83,740,174 - 83,821,691 (81,518)
query : 1 - 4,094 (4,094/4,104)
29 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 16.5, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004337)
HIX0004337
HIT000608429 (
ENST00000508502
)
(Protein transport protein Sec31A; ABP125; ABP130; SEC31-like protein 1; SEC31-related protein A; Web1-like protein;)
genome : 83,740,174 - 83,812,356 (72,183)
query : 1 - 3,791 (3,791/3,801)
27 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 17, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004337)
HIX0004337
HIT000387511
(
BC117221
)
(Protein transport protein Sec31A; ABP125; ABP130; SEC31-like protein 1; SEC31-related protein A; Web1-like protein;)
genome : 83,740,197 - 83,812,301 (72,105)
query : 1 - 3,713 (3,713/3,713)
27 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.994;1.000;1.000;
0.993;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 17, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004337)
HIX0004337
HIT000501942
(
BC143489
)
(Protein transport protein Sec31A; ABP125; ABP130; SEC31-like protein 1; SEC31-related protein A; Web1-like protein;)
genome : 83,740,197 - 83,812,300 (72,104)
query : 2 - 3,710 (3,709/3,710)
27 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.994;1.000;1.000;
0.993;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 17, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004337)
HIX0004337
HIT000501944
(
BC143491
)
(Protein transport protein Sec31A; ABP125; ABP130; SEC31-like protein 1; SEC31-related protein A; Web1-like protein;)
genome : 83,740,197 - 83,812,301 (72,105)
query : 1 - 3,713 (3,713/3,713)
27 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.994;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 17, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004337)
HIX0004337
HIT000501945
(
BC143492
)
(Protein transport protein Sec31A; ABP125; ABP130; SEC31-like protein 1; SEC31-related protein A; Web1-like protein;)
genome : 83,740,197 - 83,812,301 (72,105)
query : 1 - 3,596 (3,596/3,596)
25 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.994;1.000;1.000;0.993;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 17, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004337)
HIX0004337
HIT000606078 (
ENST00000505984
)
(Protein transport protein Sec31A; ABP125; ABP130; SEC31-like protein 1; SEC31-related protein A; Web1-like protein;)
genome : 83,740,197 - 83,812,301 (72,105)
query : 1 - 3,596 (3,596/3,596)
25 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 17, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004337)
HIX0004337
HIT000071118
(
AF139184
)
(Protein transport protein Sec31A; ABP125; ABP130; SEC31-like protein 1; SEC31-related protein A; Web1-like protein;)
genome : 83,740,227 - 83,803,089 (62,863)
query : 1 - 3,663 (3,663/3,663)
26 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.994;1.000;1.000;
0.993;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 16.5, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004337)
HIX0004337
HIT000004635
(
AK002161
)
(Protein transport protein Sec31A; ABP125; ABP130; SEC31-like protein 1; SEC31-related protein A; Web1-like protein;)
genome : 83,764,838 - 83,812,306 (47,469)
query : 1 - 3,397 (3,397/3,397)
21 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.994;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 13.5, nucl 8.5, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004337)
HIX0004337
HIT000608407 (
ENST00000508479
)
(Protein transport protein Sec31A; ABP125; ABP130; SEC31-like protein 1; SEC31-related protein A; Web1-like protein;)
genome : 83,764,838 - 83,812,306 (47,469)
query : 1 - 3,397 (3,397/3,397)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 13.5, nucl 8.5, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004337)
HIX0004337
HIT000053268
(
BC047883
)
(Protein transport protein Sec31A isoform 2.)
genome : 83,784,365 - 83,812,337 (27,973)
query : 1 - 1,716 (1,716/1,732)
12 exons
identity = 0.999
3'(1.000;1.000;1.000;0.994;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 13, nucl 7.5, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004337)
HIX0004337
HIT000534724 (
ENST00000436790
)
(Protein transport protein Sec31A isoform 2.)
genome : 83,784,364 - 83,812,337 (27,974)
query : 1 - 1,717 (1,717/1,717)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 13, nucl 7.5, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004337)
HIX0004337
HIT000603369 (
ENST00000503058
)
(Protein transport protein Sec31A; ABP125; ABP130; SEC31-like protein 1; SEC31-related protein A; Web1-like protein;)
genome : 83,793,086 - 83,812,273 (19,188)
query : 1 - 706 (706/706)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18.5, cyto 16, nucl 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004337)
HIX0183355
pHIT000008465 ( pHIT000008465 )
Representative transcript
(Conserved hypothetical protein.)
genome : 83,323,055 - 83,323,751 (697)
query : 1 - 663 (663/663)
2 exons
InterPro :
IPR007304 : TAP42-like protein
GO :
0009966 : Biological Process : regulation of signal transduction
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0183355)
CAGE tag :
H05BA43P0207,H05BA61I2307,H05BE29A0409
H09BA89J0909,H22BA79M0907
Ortholog candidate ( ->
Evola
)
Tetraodon
sp. (Tetraodon) : CR679357
Macaca
sp. (Macaque) : XM_001083324
Pan
sp. (Chimpanzee) : XR_022772
AC093747.2
82500001-82508343 F +
NCBI
AC112238.5
82508344-82510207 F +
NCBI
AC114746.5
82510208-82645645 F +
NCBI
AC097477.2
82645646-82705498 F +
NCBI
AC021863.5
82705499-82895712 F +
NCBI
AC093754.2
82895713-83043632 F +
NCBI
AC095049.3
83043633-83127941 F +
NCBI
AC116631.6
83127942-83251076 F +
NCBI
AC124016.3
83251077-83351294 F +
NCBI
AC110787.3
83351295-83356629 F +
NCBI
AC067942.6
83356630-83542028 F +
NCBI
AC073413.6
83542029-83725720 F +
NCBI
AC108469.5
83725721-83783758 F +
NCBI
AC021105.13
83783759-83969118 F -
NCBI
AC108473.4
83969119-83971112 F +
NCBI
AC073840.8
83971113-84100000 F +
NCBI