bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0205631
HIT000607406 (
ENST00000507410
)
(Conserved hypothetical protein.)
genome : 43,588,345 - 43,590,114 (1,770)
query : 1 - 1,770 (1,770/1,770)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 11, plas 2, extr 2, cysk 2, extr_plas 2,
cysk_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205631)
HIX0216059
HIT000595224 (
ENST00000491708
)
(Hypothetical short protein.)
genome : 43,865,291 - 43,865,563 (273)
query : 1 - 273 (273/273)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216059)
HIX0031841
HIT000105388 (
ENST00000244249
)
(NADH:ubiquinone oxidoreductase, subunit NDUFB4 family protein.)
genome : 43,900,992 - 43,901,368 (377)
query : 14 - 390 (377/390)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.967
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 12, mito 4, nucl 3.5, plas 2,
pero 2, E.R._mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031841)
HIX0031841
HIT000613034_02 (
ENST00000513465
)
(NADH:ubiquinone oxidoreductase, subunit NDUFB4 family protein.)
genome : 43,900,979 - 43,901,368 (390)
query : 1 - 390 (390/390)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 12.5, nucl 5.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031841)
HIX0205735
HIT000608983 (
ENST00000509098
)
(Hypothetical short protein.)
genome : 43,982,023 - 43,983,637 (1,615)
query : 1 - 449 (449/449)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205735)
HIX0120264
HIT000438600
(
DQ572069
)
Representative transcript
(Non-protein coding transcript.)
genome : 44,017,122 - 44,017,151 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0120264)
HIX0120368
HIT000445922
(
DQ579391
)
Representative transcript
(Non-protein coding transcript.)
genome : 44,018,141 - 44,018,170 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0120368)
HIX0031743
HIT000607622 (
ENST00000507639
)
(Conserved hypothetical protein.)
genome : 44,018,878 - 44,022,273 (3,396)
query : 1 - 708 (708/708)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 8, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031743)
HIX0031743
HIT000097464
(
BC042992
)
Representative transcript
(Conserved hypothetical protein.)
genome : 44,019,079 - 44,024,078 (5,000)
query : 6 - 2,625 (2,620/2,642)
2 exons
identity = 0.997
5'(0.997;0.997)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 5.5, cyto_nucl 4.5, mito 4, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031743)
HIX0031743
HIT000612313 (
ENST00000512678
)
(Conserved hypothetical protein.)
genome : 44,019,079 - 44,024,080 (5,002)
query : 1 - 2,622 (2,622/2,622)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 13, mito 11, lyso 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031743)
HIX0024622
HIT000319284 (
NM_198353
)
(BTB/POZ domain-containing protein KCTD8.)
genome : 44,175,920 - 44,450,824 (274,905)
query : 1 - 2,593 (2,593/2,593)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 17.5, cyto 11
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024622)
HIX0024622
HIT000313473 (
ENST00000360029
)
(BTB/POZ domain-containing protein KCTD8.)
genome : 44,175,926 - 44,450,824 (274,899)
query : 1 - 2,587 (2,587/2,587)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 17.5, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024622)
HIX0024622
HIT000493455
(
AK298831
)
(BTB/POZ domain-containing protein KCTD8.)
genome : 44,175,943 - 44,450,510 (274,568)
query : 1 - 2,039 (2,039/2,039)
3 exons
identity = 0.999
3'(1.000;1.000;0.995)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 15, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024622)
HIX0024622
HIT000043220
(
AK123347
)
Representative transcript
(BTB/POZ domain-containing protein KCTD8.)
genome : 44,176,273 - 44,450,824 (274,552)
query : 1 - 2,240 (2,240/2,240)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000210 : BTB/POZ-like
IPR003131 : Potassium channel tetramerisation-type BTB domain
IPR011333 : BTB/POZ fold
GO :
0005515 : Molecular Function : protein binding
0051260 : Biological Process : protein homooligomerization
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 17.5, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024622)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AY615967
Danio
sp. (Zebrafish) : AY763410
Oryzias
sp. (Medaka) : ENSORLT00000007856
Pongo
sp. (Orangutan) : ENSPPYT00000017092
Rattus
sp. (Rat) : ENSRNOT00000031329
Takifugu
sp. (Fugu) : SINFRUT00000152419
Macaca
sp. (Macaque) : XM_001099551
Gallus
sp. (Chicken) : XM_001233939
Monodelphis
sp. (Opossum) : XM_001364752
Equus
sp. (Horse) : XM_001917189
Pan
sp. (Chimpanzee) : XM_517173
Bos
sp. (Cow) : XM_590048
Canis
sp. (Dog) : XM_848248
HIX0024622
HIT000390796
(
BC132743
)
(BTB/POZ domain-containing protein KCTD8.)
genome : 44,176,707 - 44,450,598 (273,892)
query : 1 - 1,580 (1,580/1,580)
2 exons
identity = 0.999
3'(0.998;1.000)5'
coverage = 1.000
InterPro :
IPR000210 : BTB/POZ-like
IPR003131 : Potassium channel tetramerisation-type BTB domain
IPR011333 : BTB/POZ fold
GO :
0005515 : Molecular Function : protein binding
0051260 : Biological Process : protein homooligomerization
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 17.5, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024622)
HIX0024622
HIT000500782
(
BC136793
)
(BTB/POZ domain-containing protein KCTD8.)
genome : 44,176,707 - 44,450,598 (273,892)
query : 1 - 1,580 (1,580/1,580)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000210 : BTB/POZ-like
IPR003131 : Potassium channel tetramerisation-type BTB domain
IPR011333 : BTB/POZ fold
GO :
0005515 : Molecular Function : protein binding
0051260 : Biological Process : protein homooligomerization
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 17.5, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024622)
HIX0024622
HIT000614711 (
ENST00000515268
)
(BTB/POZ domain-containing protein KCTD8.)
genome : 44,176,972 - 44,449,630 (272,659)
query : 1 - 464 (464/464)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18, nucl 7, mito 3.5, E.R._mito 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024622)
HIX0216116
HIT000696621 (
ENST00000584757
)
(Non-protein coding transcript.)
genome : 44,450,022 - 44,450,127 (106)
query : 1 - 106 (106/106)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216116)
HIX0205431
HIT000603863 (
ENST00000503587
)
(Conserved hypothetical protein.)
genome : 44,535,632 - 44,535,897 (266)
query : 1 - 266 (266/266)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 6, cyto 3.5, mito_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205431)
HIX0004184
HIT000513829 (
ENST00000415895
)
(Yip1 domain containing protein.)
genome : 44,624,086 - 44,652,118 (28,033)
query : 1 - 1,117 (1,117/1,117)
5 exons
identity = 0.996
3'(1.000;1.000;1.000;0.976;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004184)
HIX0004184
HIT000128117 (
ENST00000332990
)
(Protein YIPF7.)
genome : 44,624,354 - 44,653,658 (29,305)
query : 1 - 937 (937/937)
6 exons
identity = 0.996
3'(1.000;1.000;1.000;0.976;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004184)
HIX0004184
HIT000318673 (
NM_182592
)
(Protein YIPF7.)
genome : 44,624,354 - 44,653,658 (29,305)
query : 1 - 937 (937/937)
6 exons
identity = 0.996
3'(1.000;1.000;1.000;0.976;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004184)
HIX0004184
HIT000021750
(
AK096895
)
Representative transcript
(Protein YIPF7.)
genome : 44,630,696 - 44,653,658 (22,963)
query : 1 - 1,239 (1,239/1,239)
4 exons
identity = 0.993
3'(0.997;0.976;0.983;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, nucl 12.5, cyto 10.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004184)
HIX0004184
HIT000337547
(
BC103995
)
(Protein YIPF5 isoform b.)
genome : 44,631,188 - 44,653,658 (22,471)
query : 1 - 583 (583/583)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004184)
HIX0004184
HIT000337548
(
BC103996
)
(Protein YIPF7.)
genome : 44,631,188 - 44,653,658 (22,471)
query : 1 - 752 (752/752)
4 exons
identity = 0.999
3'(1.000;0.994;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, cyto 12, nucl 11, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004184)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC089576
Danio
sp. (Zebrafish) : BC107499
Bos
sp. (Cow) : BC140593
Gallus
sp. (Chicken) : BX935861
Oryzias
sp. (Medaka) : ENSORLT00000013454
Pan
sp. (Chimpanzee) : ENSPTRT00000029874
Monodelphis
sp. (Opossum) : XM_001372795
Equus
sp. (Horse) : XM_001493980
Rattus
sp. (Rat) : XM_344236
Canis
sp. (Dog) : XM_532367
HIX0004184
HIT000603121 (
ENST00000502794
)
(Protein YIPF5 isoform b.)
genome : 44,631,188 - 44,653,658 (22,471)
query : 1 - 583 (583/583)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004184)
HIX0004184
HIT000609863 (
ENST00000510035
)
(Protein YIPF7.)
genome : 44,631,188 - 44,653,658 (22,471)
query : 1 - 752 (752/752)
4 exons
identity = 0.999
3'(1.000;0.994;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, cyto 12, nucl 11, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004184)
HIX0004184
HIT000608843 (
ENST00000508947
)
(Conserved hypothetical protein.)
genome : 44,652,001 - 44,680,573 (28,573)
query : 1 - 484 (484/484)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004184)
HIX0004185
HIT000208474 (
NM_021927
)
(Translation factor GUF1, mitochondrial; EC=3.6.5.-; Elongation factor 4 homolog; EF-4; GTPase GUF1; Ribosomal back-translocase; Precursor;)
genome : 44,680,433 - 44,702,697 (22,265)
query : 1 - 4,216 (4,216/4,230)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.5.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto 9.5, cyto_nucl 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004185)
HIX0004185
HIT000606835 (
ENST00000506793
)
(Translation factor GUF1, mitochondrial.)
genome : 44,680,444 - 44,702,776 (22,333)
query : 1 - 3,970 (3,970/3,970)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 14.5, cyto 14.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004185)
HIX0004185
HIT000112106 (
ENST00000281543
)
(Translation factor GUF1, mitochondrial; EC=3.6.5.-; Elongation factor 4 homolog; EF-4; GTPase GUF1; Ribosomal back-translocase; Precursor;)
genome : 44,680,446 - 44,702,943 (22,498)
query : 1 - 4,449 (4,449/4,449)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.5.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto 9.5, cyto_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004185)
HIX0004185
HIT000051802
(
BC036768
)
Representative transcript
(Translation factor GUF1, mitochondrial; EC=3.6.5.-; Elongation factor 4 homolog; EF-4; GTPase GUF1; Ribosomal back-translocase; Precursor;)
genome : 44,680,472 - 44,700,781 (20,310)
query : 1 - 2,261 (2,261/2,350)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.5.-
InterPro :
IPR000640 : Translation elongation factor EFG, V domain
IPR000795 : Elongation factor, GTP-binding domain
IPR004161 : Translation elongation factor EFTu/EF1A, domain 2
IPR005225 : Small GTP-binding protein domain
IPR006297 : Elongation factor 4
IPR009000 : Translation protein, beta-barrel domain
IPR009022 : Elongation factor G, III-V domain
IPR013842 : GTP-binding protein LepA, C-terminal
GO :
0003924 : Molecular Function : GTPase activity
0005525 : Molecular Function : GTP binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto 9.5, cyto_nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004185)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB179285
Gallus
sp. (Chicken) : AJ719687
Mus
sp. (Mouse) : AK084627
Bos
sp. (Cow) : BC147985
Oryzias
sp. (Medaka) : ENSORLT00000011963
Pongo
sp. (Orangutan) : ENSPPYT00000017093
Rattus
sp. (Rat) : ENSRNOT00000003017
Tetraodon
sp. (Tetraodon) : GSTENT00007053001
Takifugu
sp. (Fugu) : SINFRUT00000147119
Monodelphis
sp. (Opossum) : XM_001372735
Equus
sp. (Horse) : XM_001493955
Pan
sp. (Chimpanzee) : XM_517175
Canis
sp. (Dog) : XM_539246
Danio
sp. (Zebrafish) : XM_677591
HIX0004185
HIT000087828
(
BC012338
)
(Translation factor GUF1, mitochondrial.)
genome : 44,680,474 - 44,700,974 (20,501)
query : 1 - 2,451 (2,451/2,473)
17 exons
identity = 0.999
5'(1.000;0.991;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR000640 : Translation elongation factor EFG, V domain
IPR000795 : Elongation factor, GTP-binding domain
IPR004161 : Translation elongation factor EFTu/EF1A, domain 2
IPR005225 : Small GTP-binding protein domain
IPR006297 : Elongation factor 4
IPR009000 : Translation protein, beta-barrel domain
IPR009022 : Elongation factor G, III-V domain
IPR013842 : GTP-binding protein LepA, C-terminal
GO :
0003924 : Molecular Function : GTPase activity
0005525 : Molecular Function : GTP binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto 9.5, cyto_nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004185)
HIX0004185
HIT000384444
(
AK225314
)
(Translation factor GUF1, mitochondrial; EC=3.6.5.-; Elongation factor 4 homolog; EF-4; GTPase GUF1; Ribosomal back-translocase; Precursor;)
genome : 44,680,478 - 44,700,892 (20,415)
query : 1 - 2,366 (2,366/2,366)
17 exons
identity = 0.998
5'(1.000;0.991;1.000;0.988;1.000;1.000;1.000;
1.000;0.993;0.992;1.000;1.000;1.000;1.000;
0.992;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.5.-
InterPro :
IPR000640 : Translation elongation factor EFG, V domain
IPR000795 : Elongation factor, GTP-binding domain
IPR004161 : Translation elongation factor EFTu/EF1A, domain 2
IPR005225 : Small GTP-binding protein domain
IPR006297 : Elongation factor 4
IPR009000 : Translation protein, beta-barrel domain
IPR009022 : Elongation factor G, III-V domain
IPR013842 : GTP-binding protein LepA, C-terminal
GO :
0003924 : Molecular Function : GTPase activity
0005525 : Molecular Function : GTP binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto 9.5, cyto_nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004185)
HIX0004185
HIT000006556
(
AK023282
)
(Translation factor GUF1, mitochondrial; EC=3.6.5.-; Elongation factor 4 homolog; EF-4; GTPase GUF1; Ribosomal back-translocase; Precursor;)
genome : 44,680,483 - 44,701,202 (20,720)
query : 1 - 2,671 (2,671/2,671)
17 exons
identity = 0.997
5'(1.000;0.982;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.992;1.000;1.000;1.000;
0.992;0.973;0.997)3'
coverage = 1.000
EC number :
EC 3.6.5.-
InterPro :
IPR000640 : Translation elongation factor EFG, V domain
IPR000795 : Elongation factor, GTP-binding domain
IPR004161 : Translation elongation factor EFTu/EF1A, domain 2
IPR005225 : Small GTP-binding protein domain
IPR006297 : Elongation factor 4
IPR009000 : Translation protein, beta-barrel domain
IPR009022 : Elongation factor G, III-V domain
IPR013842 : GTP-binding protein LepA, C-terminal
GO :
0003924 : Molecular Function : GTPase activity
0005525 : Molecular Function : GTP binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto 9.5, cyto_nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004185)
HIX0004185
HIT000613320 (
ENST00000513775
)
(Translation factor GUF1 homolog, mitochondrial; EC=3.6.5.-; Elongation factor 4 homolog; EF-4; GTPase GUF1 homolog; Ribosomal back-translocase; Precursor;)
genome : 44,680,511 - 44,691,426 (10,916)
query : 1 - 1,219 (1,219/1,219)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.5.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, nucl 6, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004185)
HIX0004185
HIT000427533
(
AK308667
)
(Translation factor GUF1 homolog, mitochondrial; EC=3.6.5.-; Elongation factor 4 homolog; EF-4; GTPase GUF1 homolog; Ribosomal back-translocase; Precursor;)
genome : 44,680,511 - 44,691,398 (10,888)
query : 1 - 1,191 (1,191/1,191)
9 exons
identity = 0.998
5'(1.000;0.993;1.000;1.000;0.988;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.5.-
InterPro :
IPR004161 : Translation elongation factor EFTu/EF1A, domain 2
IPR009000 : Translation protein, beta-barrel domain
IPR009022 : Elongation factor G, III-V domain
GO :
0005525 : Molecular Function : GTP binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 16.5, cyto_plas 13.3333, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004185)
HIX0004185
HIT000306551
(
CR749539
)
(Translation factor GUF1, mitochondrial.)
genome : 44,686,029 - 44,691,086 (5,058)
query : 1 - 5,057 (5,057/5,153)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, nucl 4, extr 3, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004185)
HIX0004185
HIT000008522
(
AK025248
)
(Translation factor GUF1, mitochondrial.)
genome : 44,690,099 - 44,702,697 (12,599)
query : 1 - 2,997 (2,997/3,013)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000640 : Translation elongation factor EFG, V domain
IPR009022 : Elongation factor G, III-V domain
IPR013842 : GTP-binding protein LepA, C-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 14, nucl 5.5, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004185)
HIX0004185
HIT000004081
(
AK001607
)
(Translation factor GUF1, mitochondrial.)
genome : 44,696,426 - 44,702,696 (6,271)
query : 11 - 2,288 (2,278/2,288)
3 exons
identity = 0.998
5'(1.000;1.000;0.998)3'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 16, cyto 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004185)
HIX0004185
HIT000611208 (
ENST00000511493
)
(Translation factor GUF1, mitochondrial.)
genome : 44,696,426 - 44,702,696 (6,271)
query : 1 - 2,278 (2,278/2,278)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 15.5, cyto 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004185)
HIX0004186
HIT000212329 (
NM_138335
)
(Glucosamine-6-phosphate isomerase 2; EC=3.5.99.6; Glucosamine-6-phosphate deaminase 2; GNPDA 2; GlcN6P deaminase 2; Glucosamine-6-phosphate isomerase SB52;)
genome : 44,703,812 - 44,728,651 (24,840)
query : 1 - 2,313 (2,313/2,313)
7 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;0.994)5'
coverage = 1.000
EC number :
EC 3.5.99.6
KEGG pathway :
00520 : Amino sugar and nucleotide sugar metabolism (92)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 15, cyto_plas 12.6667, nucl 4.5,
pero 2, cysk 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004186)
HIX0004186
HIT000724829 (
NM_001270880
)
(Glucosamine-6-phosphate isomerase 2; EC=3.5.99.6; Glucosamine-6-phosphate deaminase 2; GNPDA 2; GlcN6P deaminase 2; Glucosamine-6-phosphate isomerase SB52;)
genome : 44,703,812 - 44,728,651 (24,840)
query : 1 - 2,211 (2,211/2,211)
6 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;0.994)5'
coverage = 1.000
EC number :
EC 3.5.99.6
KEGG pathway :
00520 : Amino sugar and nucleotide sugar metabolism (92)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 16, cyto_plas 12.3333, nucl 5.5,
pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004186)
HIX0004186
HIT000724830 (
NM_001270881
)
(Glucosamine-6-phosphate isomerase 2 isoform 3.)
genome : 44,703,812 - 44,728,651 (24,840)
query : 1 - 2,154 (2,154/2,154)
6 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;0.994)5'
coverage = 1.000
EC number :
EC 3.5.99.6
KEGG pathway :
00520 : Amino sugar and nucleotide sugar metabolism (92)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 15, nucl 6, extr 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004186)
HIX0004186
HIT000727459 (
NR_073094
)
(Glucosamine-6-phosphate isomerase 2; EC=3.5.99.6; Glucosamine-6-phosphate deaminase 2; GNPDA 2; GlcN6P deaminase 2; Glucosamine-6-phosphate isomerase SB52;)
genome : 44,703,812 - 44,728,651 (24,840)
query : 1 - 2,218 (2,218/2,218)
7 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;0.994)5'
coverage = 1.000
EC number :
EC 3.5.99.6
KEGG pathway :
00520 : Amino sugar and nucleotide sugar metabolism (92)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26.5, cyto_nucl 14, mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004186)
HIX0004186
HIT000727460 (
NR_073095
)
(Glucosamine-6-phosphate isomerase 2; EC=3.5.99.6; Glucosamine-6-phosphate deaminase 2; GNPDA 2; GlcN6P deaminase 2; Glucosamine-6-phosphate isomerase SB52;)
genome : 44,703,812 - 44,728,651 (24,840)
query : 1 - 1,869 (1,869/1,869)
4 exons
identity = 0.999
3'(0.999;1.000;1.000;0.994)5'
coverage = 1.000
EC number :
EC 3.5.99.6
KEGG pathway :
00520 : Amino sugar and nucleotide sugar metabolism (92)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004186)
HIX0004186
HIT000331711
(
AY173948
)
(Glucosamine-6-phosphate isomerase 2; EC=3.5.99.6; Glucosamine-6-phosphate deaminase 2; GNPDA 2; GlcN6P deaminase 2; Glucosamine-6-phosphate isomerase SB52;)
genome : 44,703,885 - 44,728,587 (24,703)
query : 2 - 2,074 (2,073/2,074)
6 exons
identity = 0.998
3'(0.998;0.994;1.000;1.000;1.000;0.990)5'
coverage = 1.000
EC number :
EC 3.5.99.6
KEGG pathway :
00520 : Amino sugar and nucleotide sugar metabolism (92)
01100 : Metabolic pathways (1346)
InterPro :
IPR004547 : Glucosamine-6-phosphate isomerase
IPR006148 : Glucosamine/galactosamine-6-phosphate isomerase
IPR018321 : Glucosamine-6-phosphate isomerase, conserved site
GO :
0004342 : Molecular Function : glucosamine-6-phosphate deaminase activity
0005975 : Biological Process : carbohydrate metabolic process
0006044 : Biological Process : N-acetylglucosamine metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 16, cyto_plas 12.3333, nucl 5.5,
pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004186)
HIX0004186
HIT000607884 (
ENST00000507917
)
(Glucosamine-6-phosphate isomerase 2; EC=3.5.99.6; Glucosamine-6-phosphate deaminase 2; GNPDA 2; GlcN6P deaminase 2; Glucosamine-6-phosphate isomerase SB52;)
genome : 44,703,885 - 44,728,587 (24,703)
query : 1 - 2,074 (2,074/2,074)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.99.6
KEGG pathway :
00520 : Amino sugar and nucleotide sugar metabolism (92)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 16, cyto_plas 12.3333, nucl 5.5,
pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004186)
HIX0004186
HIT000029236
(
AL834506
)
(Glucosamine-6-phosphate isomerase 2; EC=3.5.99.6; Glucosamine-6-phosphate deaminase 2; GNPDA 2; GlcN6P deaminase 2; Glucosamine-6-phosphate isomerase SB52;)
genome : 44,704,158 - 44,719,183 (15,026)
query : 1 - 1,416 (1,416/1,437)
4 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000)5'
coverage = 0.999
EC number :
EC 3.5.99.6
KEGG pathway :
00520 : Amino sugar and nucleotide sugar metabolism (92)
01100 : Metabolic pathways (1346)
InterPro :
IPR004547 : Glucosamine-6-phosphate isomerase
IPR006148 : Glucosamine/galactosamine-6-phosphate isomerase
IPR018321 : Glucosamine-6-phosphate isomerase, conserved site
GO :
0004342 : Molecular Function : glucosamine-6-phosphate deaminase activity
0005975 : Biological Process : carbohydrate metabolic process
0006044 : Biological Process : N-acetylglucosamine metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, mito 13, cyto_nucl 9, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004186)
HIX0004186
HIT000012253
(
AK055639
)
(Glucosamine-6-phosphate isomerase 2; EC=3.5.99.6; Glucosamine-6-phosphate deaminase 2; GNPDA 2; GlcN6P deaminase 2; Glucosamine-6-phosphate isomerase SB52;)
genome : 44,704,168 - 44,728,571 (24,404)
query : 1 - 1,877 (1,877/1,905)
7 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000;0.994;0.988)5'
coverage = 1.000
EC number :
EC 3.5.99.6
KEGG pathway :
00520 : Amino sugar and nucleotide sugar metabolism (92)
01100 : Metabolic pathways (1346)
InterPro :
IPR004547 : Glucosamine-6-phosphate isomerase
IPR006148 : Glucosamine/galactosamine-6-phosphate isomerase
IPR018321 : Glucosamine-6-phosphate isomerase, conserved site
GO :
0004342 : Molecular Function : glucosamine-6-phosphate deaminase activity
0005975 : Biological Process : carbohydrate metabolic process
0006044 : Biological Process : N-acetylglucosamine metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 15.5, cyto_plas 12.5, nucl 5,
pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004186)
HIX0004186
HIT000037170
(
BC015532
)
(Glucosamine-6-phosphate isomerase 2; EC=3.5.99.6; Glucosamine-6-phosphate deaminase 2; GNPDA 2; GlcN6P deaminase 2; Glucosamine-6-phosphate isomerase SB52;)
genome : 44,704,156 - 44,724,251 (20,096)
query : 1 - 1,797 (1,797/1,811)
6 exons
identity = 0.997
3'(0.998;0.983;0.995;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.99.6
KEGG pathway :
00520 : Amino sugar and nucleotide sugar metabolism (92)
01100 : Metabolic pathways (1346)
InterPro :
IPR004547 : Glucosamine-6-phosphate isomerase
IPR006148 : Glucosamine/galactosamine-6-phosphate isomerase
IPR018321 : Glucosamine-6-phosphate isomerase, conserved site
GO :
0004342 : Molecular Function : glucosamine-6-phosphate deaminase activity
0005975 : Biological Process : carbohydrate metabolic process
0006044 : Biological Process : N-acetylglucosamine metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 15, cyto_plas 12.6667, nucl 4.5,
pero 2, cysk 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004186)
HIX0004186
HIT000074966
(
AF247786
)
Representative transcript
(Glucosamine-6-phosphate isomerase 2; EC=3.5.99.6; Glucosamine-6-phosphate deaminase 2; GNPDA 2; GlcN6P deaminase 2; Glucosamine-6-phosphate isomerase SB52;)
genome : 44,704,168 - 44,728,612 (24,445)
query : 1 - 1,918 (1,918/1,939)
7 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000;1.000;0.992)5'
coverage = 1.000
EC number :
EC 3.5.99.6
KEGG pathway :
00520 : Amino sugar and nucleotide sugar metabolism (92)
01100 : Metabolic pathways (1346)
InterPro :
IPR004547 : Glucosamine-6-phosphate isomerase
IPR006148 : Glucosamine/galactosamine-6-phosphate isomerase
IPR018321 : Glucosamine-6-phosphate isomerase, conserved site
GO :
0004342 : Molecular Function : glucosamine-6-phosphate deaminase activity
0005975 : Biological Process : carbohydrate metabolic process
0006044 : Biological Process : N-acetylglucosamine metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 15, cyto_plas 12.6667, nucl 4.5,
pero 2, cysk 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004186)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK016785
Bos
sp. (Cow) : BC118295
Tetraodon
sp. (Tetraodon) : CR695613
Equus
sp. (Horse) : ENSECAT00000016939
Gallus
sp. (Chicken) : ENSGALT00000022980
Macaca
sp. (Macaque) : ENSMMUT00000012962
Oryzias
sp. (Medaka) : ENSORLT00000007532
Pongo
sp. (Orangutan) : ENSPPYT00000017094
Takifugu
sp. (Fugu) : SINFRUT00000152425
Pan
sp. (Chimpanzee) : XM_001143245
Monodelphis
sp. (Opossum) : XM_001364684
Rattus
sp. (Rat) : XM_214029
Danio
sp. (Zebrafish) : XM_679055
Canis
sp. (Dog) : XM_844324
HIX0004186
HIT000114165 (
ENST00000295448
)
(Glucosamine-6-phosphate isomerase 2; EC=3.5.99.6; Glucosamine-6-phosphate deaminase 2; GNPDA 2; GlcN6P deaminase 2; Glucosamine-6-phosphate isomerase SB52;)
genome : 44,704,156 - 44,728,612 (24,457)
query : 1 - 1,930 (1,930/1,930)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.99.6
KEGG pathway :
00520 : Amino sugar and nucleotide sugar metabolism (92)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 15, cyto_plas 12.6667, nucl 4.5,
pero 2, cysk 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004186)
HIX0004186
HIT000490675
(
AK296051
)
(Glucosamine-6-phosphate isomerase 2 isoform 3.)
genome : 44,704,805 - 44,728,540 (23,736)
query : 1 - 1,050 (1,050/1,050)
6 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.980)5'
coverage = 1.000
EC number :
EC 3.5.99.6
KEGG pathway :
00520 : Amino sugar and nucleotide sugar metabolism (92)
01100 : Metabolic pathways (1346)
InterPro :
IPR004547 : Glucosamine-6-phosphate isomerase
IPR006148 : Glucosamine/galactosamine-6-phosphate isomerase
IPR018321 : Glucosamine-6-phosphate isomerase, conserved site
GO :
0004342 : Molecular Function : glucosamine-6-phosphate deaminase activity
0005975 : Biological Process : carbohydrate metabolic process
0006044 : Biological Process : N-acetylglucosamine metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 15, nucl 6, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004186)
HIX0004186
HIT000607522 (
ENST00000507534
)
(Glucosamine-6-phosphate isomerase 2; EC=3.5.99.6; Glucosamine-6-phosphate deaminase 2; GNPDA 2; GlcN6P deaminase 2; Glucosamine-6-phosphate isomerase SB52;)
genome : 44,704,805 - 44,728,540 (23,736)
query : 1 - 1,050 (1,050/1,050)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.99.6
KEGG pathway :
00520 : Amino sugar and nucleotide sugar metabolism (92)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 15, nucl 6, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004186)
HIX0004186
HIT000329839
(
AB209904
)
(Glucosamine-6-phosphate isomerase 2; EC=3.5.99.6; Glucosamine-6-phosphate deaminase 2; GNPDA 2; GlcN6P deaminase 2; Glucosamine-6-phosphate isomerase SB52;)
genome : 44,705,263 - 44,728,562 (23,300)
query : 1 - 5,383 (5,383/5,383)
6 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000;0.986)5'
coverage = 1.000
EC number :
EC 3.5.99.6
KEGG pathway :
00520 : Amino sugar and nucleotide sugar metabolism (92)
01100 : Metabolic pathways (1346)
InterPro :
IPR004547 : Glucosamine-6-phosphate isomerase
IPR006148 : Glucosamine/galactosamine-6-phosphate isomerase
IPR018321 : Glucosamine-6-phosphate isomerase, conserved site
GO :
0004342 : Molecular Function : glucosamine-6-phosphate deaminase activity
0005975 : Biological Process : carbohydrate metabolic process
0006044 : Biological Process : N-acetylglucosamine metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 15, cyto_plas 12.6667, nucl 4.5,
pero 2, cysk 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004186)
HIX0004186
HIT000609604 (
ENST00000509756
)
(Glucosamine-6-phosphate isomerase 2; EC=3.5.99.6; Glucosamine-6-phosphate deaminase 2; GNPDA 2; GlcN6P deaminase 2; Glucosamine-6-phosphate isomerase SB52;)
genome : 44,705,263 - 44,728,562 (23,300)
query : 1 - 5,382 (5,382/5,382)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.99.6
KEGG pathway :
00520 : Amino sugar and nucleotide sugar metabolism (92)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 15, cyto_plas 12.6667, nucl 4.5,
pero 2, cysk 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004186)
HIX0004186
HIT000427786
(
AK308920
)
(Glucosamine-6-phosphate isomerase; EC=3.5.99.6; Glucosamine-6-phosphate deaminase; GNPDA; GlcN6P deaminase;)
genome : 44,708,429 - 44,728,605 (20,177)
query : 1 - 1,632 (1,632/1,632)
2 exons
identity = 0.996
3'(0.997;0.991)5'
coverage = 1.000
EC number :
EC 3.5.99.6
KEGG pathway :
00520 : Amino sugar and nucleotide sugar metabolism (92)
01100 : Metabolic pathways (1346)
InterPro :
IPR004547 : Glucosamine-6-phosphate isomerase
GO :
0004342 : Molecular Function : glucosamine-6-phosphate deaminase activity
0006044 : Biological Process : N-acetylglucosamine metabolic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, nucl 3.5, cyto_nucl 3.5, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004186)
HIX0004186
HIT000610918 (
ENST00000511187
)
(Glucosamine-6-phosphate isomerase; EC=3.5.99.6; Glucosamine-6-phosphate deaminase; GNPDA; GlcN6P deaminase;)
genome : 44,708,429 - 44,728,605 (20,177)
query : 1 - 1,630 (1,630/1,630)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.5.99.6
KEGG pathway :
00520 : Amino sugar and nucleotide sugar metabolism (92)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, cyto 5.5, cyto_nucl 5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004186)
HIX0205927
HIT000612558 (
ENST00000512950
)
(Conserved hypothetical protein.)
genome : 44,842,397 - 44,843,419 (1,023)
query : 1 - 1,023 (1,023/1,023)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 8, extr 6, cyto_nucl 6, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205927)
HIX0205618
HIT000607195 (
ENST00000507189
)
(Thioredoxin-like fold domain containing protein.)
genome : 44,946,032 - 44,946,978 (947)
query : 1 - 574 (574/574)
2 exons
identity = 0.988
3'(0.969;0.990)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 15, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205618)
HIX0206072
HIT000615040 (
ENST00000515623
)
(Conserved hypothetical protein.)
genome : 45,011,557 - 45,053,669 (42,113)
query : 1 - 672 (672/672)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206072)
AC098590.3
43500001-43545356 F +
NCBI
AC114774.5
43545357-43603064 F +
NCBI
AC092581.2
43603065-43763139 F +
NCBI
AC080132.6
43763140-43875459 F +
NCBI
AC110799.3
43875460-43999244 F +
NCBI
AC114757.3
43999245-44058772 F +
NCBI
AC108149.4
44058773-44143096 F +
NCBI
AC093861.3
44143097-44344816 F +
NCBI
AC131951.1
44344817-44481688 F +
NCBI
AC093852.3
44481689-44640589 F +
NCBI
AC108478.6
44640590-44643631 F +
NCBI
AC096586.3
44643632-44815149 F -
NCBI
AC110811.4
44815150-44834253 F +
NCBI
AC093755.2
44834254-44978926 F -
NCBI
AC108467.5
44978927-45069896 F +
NCBI
AC093795.3
45069897-45100000 F +
NCBI