bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0004664
HIT000038022
(
BC017472
)
(RWD domain-containing protein 4; Protein FAM28A;)
genome : 184,560,792 - 184,580,307 (19,516)
query : 1 - 2,565 (2,565/2,579)
7 exons
identity = 0.998
3'(0.999;0.943;0.992;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR006575 : RWD domain
IPR016135 : Ubiquitin-conjugating enzyme/RWD-like
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 7, cysk 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004664)
HIX0004664
HIT000124571 (
ENST00000326397
)
(RWD domain-containing protein 4; Protein FAM28A;)
genome : 184,560,788 - 184,580,378 (19,591)
query : 1 - 2,641 (2,641/2,641)
7 exons
identity = 0.999
3'(1.000;0.943;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 8, cysk 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004664)
HIX0004664
HIT000125063 (
ENST00000327570
)
(RWD domain-containing protein 4; Protein FAM28A;)
genome : 184,560,789 - 184,580,331 (19,543)
query : 1 - 2,590 (2,590/2,590)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 8, cysk 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004664)
HIX0004664
HIT000213937 (
NM_152682
)
(RWD domain-containing protein 4; Protein FAM28A;)
genome : 184,560,789 - 184,580,331 (19,543)
query : 1 - 2,593 (2,593/2,593)
7 exons
identity = 0.999
3'(1.000;0.943;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 8, cysk 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004664)
HIX0004664
HIT000004976
(
AK021702
)
(RWD domain-containing protein 4.)
genome : 184,561,075 - 184,580,295 (19,221)
query : 1 - 2,273 (2,273/2,273)
7 exons
identity = 0.997
3'(0.999;0.943;0.992;0.993;0.991;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 8, cysk 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004664)
HIX0004664
HIT000487898
(
AK293274
)
(RWD domain-containing protein 4.)
genome : 184,561,613 - 184,580,304 (18,692)
query : 1 - 1,551 (1,551/1,551)
5 exons
identity = 0.995
3'(0.996;0.943;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, nucl 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004664)
HIX0004664
HIT000610710_01 (
ENST00000510968
)
(RWD domain-containing protein 4.)
genome : 184,561,613 - 184,580,304 (18,692)
query : 1 - 1,551 (1,551/1,551)
5 exons
identity = 0.998
3'(1.000;0.943;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, nucl 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004664)
HIX0004664
HIT000338754
(
BC107432
)
Representative transcript
(RWD domain-containing protein 4; Protein FAM28A;)
genome : 184,561,769 - 184,580,149 (18,381)
query : 5 - 1,435 (1,431/1,460)
7 exons
identity = 0.996
3'(0.998;0.943;1.000;0.993;1.000;1.000;1.000)5'
coverage = 0.997
InterPro :
IPR006575 : RWD domain
IPR016135 : Ubiquitin-conjugating enzyme/RWD-like
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 8, cysk 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004664)
Ortholog candidate ( ->
Evola
)
Canis
sp. (Dog) : AJ388553
Mus
sp. (Mouse) : AK004597
Danio
sp. (Zebrafish) : BC083422
Rattus
sp. (Rat) : BC092581
Bos
sp. (Cow) : BC123494
Gallus
sp. (Chicken) : BX932210
Tetraodon
sp. (Tetraodon) : CR646041
Monodelphis
sp. (Opossum) : ENSMODT00000005314
Oryzias
sp. (Medaka) : ENSORLT00000015361
Pongo
sp. (Orangutan) : ENSPPYT00000017703
Takifugu
sp. (Fugu) : SINFRUT00000179679
Macaca
sp. (Macaque) : XM_001097379
Equus
sp. (Horse) : XM_001492050
Pan
sp. (Chimpanzee) : XM_526746
HIX0004664
HIT000610463_01 (
ENST00000510702
)
(RWD domain-containing protein 4.)
genome : 184,561,781 - 184,580,354 (18,574)
query : 1 - 1,620 (1,620/1,620)
7 exons
identity = 0.998
3'(1.000;0.943;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, mito 9, extr 5, cyto 3, extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004664)
HIX0004664
HIT000612368_01 (
ENST00000512740
)
(RWD domain-containing protein 4.)
genome : 184,561,882 - 184,580,309 (18,428)
query : 1 - 1,393 (1,393/1,393)
6 exons
identity = 0.998
3'(1.000;0.943;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, mito 9, extr 5, cyto 3, extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004664)
HIX0004664
HIT000262720
(
BC067752
)
(RWD domain-containing protein 4; Protein FAM28A;)
genome : 184,562,374 - 184,580,331 (17,958)
query : 1 - 1,008 (1,008/1,025)
7 exons
identity = 0.997
3'(1.000;0.943;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR006575 : RWD domain
IPR016135 : Ubiquitin-conjugating enzyme/RWD-like
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 8, cysk 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004664)
HIX0004664
HIT000613830_01 (
ENST00000514322
)
(RWD domain-containing protein 4; Protein FAM28A;)
genome : 184,562,492 - 184,580,356 (17,865)
query : 1 - 805 (805/805)
6 exons
identity = 0.996
3'(1.000;0.943;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, cyto 13.5, nucl 11.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004664)
HIX0004664
HIT000434381
(
AK315515
)
(RWD domain-containing protein 4; Protein FAM28A;)
genome : 184,562,589 - 184,580,306 (17,718)
query : 1 - 768 (768/768)
7 exons
identity = 0.996
3'(1.000;0.943;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR006575 : RWD domain
IPR016135 : Ubiquitin-conjugating enzyme/RWD-like
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 8, cysk 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004664)
HIX0004664
HIT000606531 (
ENST00000506467
)
(RWD domain-containing protein 4.)
genome : 184,572,433 - 184,577,249 (4,817)
query : 1 - 264 (264/264)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 12, extr 9, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004664)
HIX0206099
HIT000615751 (
ENST00000516348
)
(Non-protein coding transcript.)
genome : 184,574,725 - 184,574,829 (105)
query : 1 - 105 (105/105)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206099)
HIX0004658
HIT000055774_03
(
BX647127
)
Representative transcript
(Trafficking protein particle complex subunit 11;)
genome : 184,580,449 - 184,634,740 (54,292)
query : 1 - 4,518 (4,518/4,578)
30 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.985;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR012880 : Domain of unknown function DUF1683, C-terminal
IPR021773 : Foie gras liver health family 1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, mito 6, pero 5, mito_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004658)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB169329
Gallus
sp. (Chicken) : AJ720895
Mus
sp. (Mouse) : AK083445
Danio
sp. (Zebrafish) : AY648743
Bos
sp. (Cow) : BC147917
Oryzias
sp. (Medaka) : ENSORLT00000013565
Pongo
sp. (Orangutan) : ENSPPYT00000017704
Pan
sp. (Chimpanzee) : ENSPTRT00000049995
Tetraodon
sp. (Tetraodon) : GSTENT00012055001
Takifugu
sp. (Fugu) : SINFRUT00000135459
Rattus
sp. (Rat) : XM_001059837
Monodelphis
sp. (Opossum) : XM_001364010
Equus
sp. (Horse) : XM_001491998
Canis
sp. (Dog) : XM_540029
HIX0004658
HIT000099376_03
(
BC051724
)
(Trafficking protein particle complex subunit 11;)
genome : 184,580,476 - 184,634,741 (54,266)
query : 1 - 4,373 (4,373/4,442)
30 exons
identity = 0.996
5'(0.992;1.000;0.994;1.000;1.000;0.990;1.000;
1.000;0.985;1.000;1.000;1.000;1.000;0.982;
1.000;1.000;1.000;1.000;0.994;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.940;
0.939;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 6, cyto_nucl 5.5, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004658)
HIX0004658
HIT000604735 (
ENST00000504526
)
(Trafficking protein particle complex subunit 11;)
genome : 184,580,476 - 184,587,531 (7,056)
query : 1 - 503 (503/503)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004658)
HIX0004658
HIT000613158 (
ENST00000513600
)
(Trafficking protein particle complex subunit 11;)
genome : 184,588,046 - 184,596,398 (8,353)
query : 1 - 533 (533/545)
4 exons
identity = 0.996
5'(1.000;1.000;1.000;0.976)3'
coverage = 0.978
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto_mito 13.5, extr 6, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004658)
HIX0004658
HIT000611131 (
ENST00000511409
)
(Trafficking protein particle complex subunit 11;)
genome : 184,588,109 - 184,598,691 (10,583)
query : 1 - 568 (568/568)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 13, extr 7, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004658)
HIX0004658
HIT000016013
(
AK091146
)
(Trafficking protein particle complex subunit 11;)
genome : 184,595,880 - 184,634,740 (38,861)
query : 1 - 3,652 (3,652/3,652)
25 exons
identity = 0.995
5'(1.000;1.000;1.000;0.993;1.000;1.000;1.000;
1.000;0.982;0.986;1.000;1.000;0.992;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.940;0.939;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 6, cyto_nucl 5.5, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004658)
HIX0004658
HIT000433923
(
AK315057
)
(Conserved hypothetical protein.)
genome : 184,595,898 - 184,633,797 (37,900)
query : 1 - 2,810 (2,810/2,810)
25 exons
identity = 0.999
5'(1.000;1.000;1.000;0.993;1.000;0.989;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.993;1.000;1.000;1.000;0.994;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 6, cyto_nucl 5.5, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004658)
HIX0004658
HIT000025348
(
AL136752
)
(Trafficking protein particle complex subunit 11;)
genome : 184,600,564 - 184,634,741 (34,178)
query : 1 - 3,457 (3,457/3,522)
22 exons
identity = 0.999
5'(0.987;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.993;0.992;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR012880 : Domain of unknown function DUF1683, C-terminal
IPR021773 : Foie gras liver health family 1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 7, pero 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004658)
HIX0004658
HIT000268401
(
CR533553
)
(Trafficking protein particle complex subunit 11;)
genome : 184,601,273 - 184,633,814 (32,542)
query : 12 - 2,465 (2,454/2,465)
21 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.995;0.993;0.992;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.996
InterPro :
IPR012880 : Domain of unknown function DUF1683, C-terminal
IPR021773 : Foie gras liver health family 1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, nucl 7, pero 4, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004658)
HIX0004658
HIT000039406
(
BC022185
)
(Conserved hypothetical protein.)
genome : 184,605,002 - 184,634,014 (29,013)
query : 1 - 2,538 (2,538/2,552)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 6, cyto_nucl 5.5, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004658)
HIX0004658
HIT000612127 (
ENST00000512476
)
(Trafficking protein particle complex subunit 11 isoform b.)
genome : 184,605,002 - 184,634,022 (29,021)
query : 1 - 2,546 (2,546/2,546)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto_nucl 12.5, cyto 10, pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004658)
HIX0004658
HIT000010266
(
AK026992
)
(Trafficking protein particle complex subunit 11;)
genome : 184,605,842 - 184,634,006 (28,165)
query : 9 - 2,205 (2,197/2,228)
16 exons
identity = 0.996
5'(0.993;1.000;0.992;1.000;0.994;1.000;1.000;
1.000;0.992;1.000;1.000;0.991;1.000;0.993;
1.000;0.992)3'
coverage = 0.996
InterPro :
IPR012880 : Domain of unknown function DUF1683, C-terminal
IPR021773 : Foie gras liver health family 1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 11, pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004658)
HIX0004658
HIT000006664
(
AK023390
)
(Conserved hypothetical protein.)
genome : 184,614,108 - 184,634,231 (20,124)
query : 2 - 1,727 (1,726/1,727)
11 exons
identity = 0.993
5'(0.992;0.945;1.000;0.992;1.000;1.000;1.000;
1.000;0.993;1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 6, cyto_nucl 5.5, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004658)
HIX0004658
HIT000006052
(
AK022778
)
(Conserved hypothetical protein.)
genome : 184,615,081 - 184,634,740 (19,660)
query : 4 - 1,951 (1,948/1,951)
9 exons
identity = 0.998
5'(1.000;0.992;1.000;1.000;1.000;0.989;1.000;
1.000;0.998)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 6, cyto_nucl 5.5, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004658)
HIX0004658
HIT000015356
(
AK090489
)
(Trafficking protein particle complex subunit 11;)
genome : 184,622,006 - 184,634,744 (12,739)
query : 1 - 2,342 (2,342/2,342)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR012880 : Domain of unknown function DUF1683, C-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 16, cyto_nucl 5.5, extr 5, cyto 5, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004658)
HIX0004658
HIT000611643 (
ENST00000511955
)
(Trafficking protein particle complex subunit 11;)
genome : 184,622,006 - 184,634,744 (12,739)
query : 1 - 2,342 (2,342/2,342)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 16, cyto_nucl 5.5, extr 5, cyto 5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004658)
HIX0004658
HIT000606490 (
ENST00000506426
)
(Trafficking protein particle complex subunit 11;)
genome : 184,622,813 - 184,628,093 (5,281)
query : 1 - 395 (395/395)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 10, cyto 3.5, cyto_pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004658)
HIX0004665
HIT000015589
(
AK090722
)
Representative transcript
(Conserved hypothetical protein.)
genome : 184,623,726 - 184,625,671 (1,946)
query : 1 - 1,946 (1,946/1,946)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, extr 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004665)
HIX0004658
HIT000024978
(
AL133076
)
(Trafficking protein particle complex subunit 11;)
genome : 184,629,578 - 184,634,745 (5,168)
query : 40 - 1,186 (1,147/1,261)
2 exons
identity = 0.982
5'(0.865;1.000)3'
coverage = 0.921
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 13, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004658)
HIX0031723
HIT000096689
(
BC041419
)
Representative transcript
(Conserved hypothetical protein.)
genome : 184,653,375 - 184,658,726 (5,352)
query : 1 - 1,928 (1,928/1,942)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 12, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031723)
HIX0004666
pHIT000008917 ( pHIT000008917 )
(Conserved hypothetical protein.)
genome : 184,719,031 - 184,780,613 (61,583)
query : 1 - 1,389 (1,389/1,389)
7 exons
SOSUI :
MEMBRANE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004666)
CAGE tag :
H28BB05O1304
HIX0004666
HIT000610976 (
ENST00000511250
)
(Conserved hypothetical protein.)
genome : 184,774,584 - 184,922,560 (147,977)
query : 1 - 496 (496/496)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004666)
HIX0004666
HIT000118003 (
ENST00000308497
)
(Storkhead-box protein, winged-helix domain containing protein.)
genome : 184,826,509 - 184,944,679 (118,171)
query : 1 - 10,458 (10,458/10,458)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004666)
HIX0004666
HIT000435546
(
BC146754
)
(Storkhead-box protein, winged-helix domain containing protein.)
genome : 184,826,509 - 184,938,842 (112,334)
query : 1 - 4,621 (4,621/4,673)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR019391 : Storkhead-box protein, winged-helix domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004666)
HIX0004666
HIT000001107
(
AB037813
)
Representative transcript
(Conserved hypothetical protein.)
genome : 184,826,509 - 184,938,875 (112,367)
query : 1 - 4,654 (4,654/4,654)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004666)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB066526
Rattus
sp. (Rat) : AF548355
Mus
sp. (Mouse) : BC100572
Monodelphis
sp. (Opossum) : ENSMODT00000005419
Oryzias
sp. (Medaka) : ENSORLT00000010064
Tetraodon
sp. (Tetraodon) : GSTENT00013717001
Takifugu
sp. (Fugu) : SINFRUT00000160400
Gallus
sp. (Chicken) : XM_001232531
Equus
sp. (Horse) : XM_001491926
Danio
sp. (Zebrafish) : XM_001919406
Danio
sp. (Zebrafish) : XM_001922863
Pan
sp. (Chimpanzee) : XM_526749
Canis
sp. (Dog) : XM_540027
Bos
sp. (Cow) : XR_027815
HIX0004666
HIT000317400 (
NM_020225
)
(Storkhead-box protein, winged-helix domain containing protein.)
genome : 184,826,509 - 184,938,875 (112,367)
query : 1 - 4,654 (4,654/4,654)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004666)
HIX0004666
HIT000536203 (
ENST00000438269
)
(Storkhead-box protein, winged-helix domain containing protein.)
genome : 184,826,509 - 184,932,577 (106,069)
query : 1 - 4,021 (4,021/4,027)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004666)
HIX0004666
HIT000422637
(
AK289840
)
(Storkhead-box protein, winged-helix domain containing protein.)
genome : 184,827,832 - 184,938,535 (110,704)
query : 3 - 2,993 (2,991/2,993)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR019391 : Storkhead-box protein, winged-helix domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004666)
HIX0004666
HIT000612168 (
ENST00000512520
)
(Storkhead-box protein, winged-helix domain containing protein.)
genome : 184,881,412 - 184,930,643 (49,232)
query : 1 - 518 (518/518)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 8, cyto 7.5, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004666)
HIX0205506
HIT000605185 (
ENST00000505025
)
(Hypothetical short protein.)
genome : 184,908,831 - 184,909,903 (1,073)
query : 1 - 622 (622/622)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 9.16667, nucl 6.5, cyto 6.5,
cyto_pero 5.16667, mito_nucl 5.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205506)
HIX0004666
HIT000612636 (
ENST00000513034
)
(Storkhead-box protein, winged-helix domain containing protein.)
genome : 184,922,478 - 184,938,531 (16,054)
query : 1 - 443 (443/443)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 6.83333, nucl 6.5, cyto 4,
cyto_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004666)
HIX0004666
HIT000026431
(
AL390216
)
(Conserved hypothetical protein.)
genome : 184,931,926 - 184,938,581 (6,656)
query : 1 - 1,040 (1,040/1,058)
3 exons
identity = 0.999
5'(0.998;1.000;1.000)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 15, cyto 9, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004666)
HIX0004666
HIT000606591 (
ENST00000506529
)
(Conserved hypothetical protein.)
genome : 184,931,926 - 184,938,596 (6,671)
query : 1 - 1,055 (1,055/1,055)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 15, cyto 9, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004666)
HIX0023192
HIT000022968
(
AK098131
)
Representative transcript
(Conserved hypothetical protein.)
genome : 184,935,188 - 184,937,535 (2,348)
query : 1 - 2,338 (2,338/2,338)
1 exon
identity = 0.992
5'(0.992)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, mito 5, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023192)
HIX0031612
HIT000021474
(
AK096619
)
Representative transcript
(Hypothetical protein.)
genome : 184,940,456 - 184,942,597 (2,142)
query : 1 - 2,139 (2,139/2,139)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 13, extr 5, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031612)
HIX0004666
HIT000026488
(
AL512713
)
(Hypothetical protein.)
genome : 184,941,321 - 184,944,677 (3,357)
query : 1 - 3,359 (3,359/3,378)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, mito 10, cyto_nucl 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004666)
HIX0004666
HIT000003868
(
AK001394
)
(Conserved hypothetical protein.)
genome : 184,942,307 - 184,944,676 (2,370)
query : 1 - 2,372 (2,372/2,372)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, mito 9, cyto_pero 9, cyto_plas 9,
cyto_golg 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004666)
HIX0205824
HIT000610647 (
ENST00000510899
)
(Complement Clr-like EGF domain containing protein.)
genome : 184,993,556 - 184,994,192 (637)
query : 1 - 637 (637/637)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 13, extr 9, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205824)
HIX0004669
HIT000051313
(
BC035035
)
Representative transcript
(Ectonucleotide pyrophosphatase/phosphodiesterase family member 6; E-NPP 6; NPP-6; EC=3.1.4.-; EC=3.1.4.38; Choline-specific glycerophosphodiester phosphodiesterase; Glycerophosphocholine cholinephosphodiesterase; GPC-Cpde; Precursor;)
genome : 185,009,859 - 185,139,019 (129,161)
query : 1 - 3,841 (3,841/3,856)
8 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.38
InterPro :
IPR002591 : Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase
IPR017849 : Alkaline phosphatase-like, alpha/beta/alpha
IPR017850 : Alkaline-phosphatase-like, core domain
IPR024873 : Ectonucleotide pyrophosphatase/phosphodiesterase family
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 10, E.R. 10, extr 7, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004669)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK046797
Danio
sp. (Zebrafish) : BC090903
Pongo
sp. (Orangutan) : CR858810
Bos
sp. (Cow) : ENSBTAT00000015375
Equus
sp. (Horse) : ENSECAT00000012066
Monodelphis
sp. (Opossum) : ENSMODT00000038398
Rattus
sp. (Rat) : ENSRNOT00000013005
Takifugu
sp. (Fugu) : SINFRUT00000182713
Macaca
sp. (Macaque) : XM_001082274
Gallus
sp. (Chicken) : XM_420512
Pan
sp. (Chimpanzee) : XM_517551
Canis
sp. (Dog) : XM_532849
HIX0004669
HIT000114606 (
ENST00000296741
)
(Ectonucleotide pyrophosphatase/phosphodiesterase family member 6; E-NPP 6; NPP-6; EC=3.1.4.-; EC=3.1.4.38; Choline-specific glycerophosphodiester phosphodiesterase; Glycerophosphocholine cholinephosphodiesterase; GPC-Cpde; Precursor;)
genome : 185,009,859 - 185,139,114 (129,256)
query : 1 - 3,936 (3,936/3,936)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.38
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 10, E.R. 10, extr 7, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004669)
HIX0004669
HIT000214303 (
NM_153343
)
(Ectonucleotide pyrophosphatase/phosphodiesterase family member 6; E-NPP 6; NPP-6; EC=3.1.4.-; EC=3.1.4.38; Choline-specific glycerophosphodiester phosphodiesterase; Glycerophosphocholine cholinephosphodiesterase; GPC-Cpde; Precursor;)
genome : 185,009,859 - 185,139,114 (129,256)
query : 1 - 3,936 (3,936/3,936)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.38
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 10, E.R. 10, extr 7, pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004669)
HIX0031599
HIT000005217
(
AK021943
)
Representative transcript
(Conserved hypothetical protein.)
genome : 185,009,860 - 185,011,720 (1,861)
query : 1 - 1,860 (1,860/1,860)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, cyto_nucl 6.83333, nucl 6, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031599)
HIX0004669
HIT000013984
(
AK057370
)
(Ectonucleotide pyrophosphatase/phosphodiesterase family member 6; E-NPP 6; NPP-6; EC=3.1.4.-; EC=3.1.4.38; Choline-specific glycerophosphodiester phosphodiesterase; Glycerophosphocholine cholinephosphodiesterase; GPC-Cpde; Precursor;)
genome : 185,011,736 - 185,139,059 (127,324)
query : 1 - 2,004 (2,004/2,004)
8 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.38
InterPro :
IPR002591 : Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase
IPR017849 : Alkaline phosphatase-like, alpha/beta/alpha
IPR017850 : Alkaline-phosphatase-like, core domain
IPR024873 : Ectonucleotide pyrophosphatase/phosphodiesterase family
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 10, E.R. 10, extr 7, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004669)
HIX0004669
HIT000252720
(
AY358676
)
(Ectonucleotide pyrophosphatase/phosphodiesterase family member 6; E-NPP 6; NPP-6; EC=3.1.4.-; EC=3.1.4.38; Choline-specific glycerophosphodiester phosphodiesterase; Glycerophosphocholine cholinephosphodiesterase; GPC-Cpde; Precursor;)
genome : 185,012,157 - 185,139,055 (126,899)
query : 1 - 1,579 (1,579/1,579)
8 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.38
InterPro :
IPR002591 : Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase
IPR017849 : Alkaline phosphatase-like, alpha/beta/alpha
IPR017850 : Alkaline-phosphatase-like, core domain
IPR024873 : Ectonucleotide pyrophosphatase/phosphodiesterase family
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 9, E.R. 9, extr 8, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004669)
HIX0004669
HIT000609881 (
ENST00000510054
)
(Ectonucleotide pyrophosphatase/phosphodiesterase family member 6 precursor.)
genome : 185,033,745 - 185,038,974 (5,230)
query : 1 - 461 (461/461)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.38
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, cyto_nucl 15.5, cyto_plas 15
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004669)
HIX0004669
HIT000612018 (
ENST00000512353
)
(Ectonucleotide pyrophosphatase/phosphodiesterase family member 6 precursor.)
genome : 185,038,016 - 185,142,383 (104,368)
query : 1 - 852 (852/852)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.38
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 17, cyto_plas 13.3333, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004669)
HIX0004669
HIT000427451
(
AK308585
)
(Ectonucleotide pyrophosphatase/phosphodiesterase family member 6 precursor.)
genome : 185,137,026 - 185,138,855 (1,830)
query : 1 - 1,255 (1,255/1,255)
2 exons
identity = 0.997
3'(0.996;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.38
InterPro :
IPR002591 : Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase
IPR017849 : Alkaline phosphatase-like, alpha/beta/alpha
IPR017850 : Alkaline-phosphatase-like, core domain
IPR024873 : Ectonucleotide pyrophosphatase/phosphodiesterase family
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 10.5, cyto_nucl 10, cyto 6.5,
extr_plas 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004669)
HIX0004669
HIT000605760 (
ENST00000505644
)
(Ectonucleotide pyrophosphatase/phosphodiesterase family member 6 precursor.)
genome : 185,137,715 - 185,138,855 (1,141)
query : 1 - 566 (566/566)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.38
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 10.5, cyto_nucl 10, cyto 6.5,
extr_plas 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004669)
HIX0205317
HIT000583885 (
ENST00000479841
)
(Conserved hypothetical protein.)
genome : 185,175,662 - 185,176,483 (822)
query : 1 - 822 (822/822)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto 4, mito 4, cyto_mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205317)
HIX0164088
HIT000506683 (
ENST00000408596
)
(Non-protein coding transcript.)
genome : 185,188,510 - 185,188,584 (75)
query : 1 - 75 (75/75)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164088)
HIX0164162
HIT000527939 (
ENST00000430005
)
(EF-hand domain pair containing protein.)
genome : 185,220,282 - 185,220,800 (519)
query : 1 - 519 (519/519)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 11.5, mito 9, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164162)
HIX0164162
HIT000604207 (
ENST00000503948
)
(EF-hand domain pair containing protein.)
genome : 185,220,282 - 185,220,793 (512)
query : 1 - 512 (512/512)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 10.5, mito 9, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0164162)
HIX0004670
HIT000013294
(
AK056680
)
Representative transcript
(Conserved hypothetical protein.)
genome : 185,233,217 - 185,236,128 (2,912)
query : 1 - 2,912 (2,912/2,912)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, extr 9, cyto 3.5, cyto_nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004670)
HIX0019191
HIT000021965
(
AK097110
)
Representative transcript
(Conserved hypothetical protein.)
genome : 185,261,909 - 185,275,130 (13,222)
query : 1 - 2,153 (2,153/2,153)
3 exons
identity = 0.995
3'(0.992;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, cyto_nucl 2, nucl 1.5, cyto 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019191)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000017709
Pan
sp. (Chimpanzee) : XM_001161729
HIX0019191
HIT000121359 (
ENST00000317596
)
(Conserved hypothetical protein.)
genome : 185,261,909 - 185,275,130 (13,222)
query : 1 - 2,153 (2,153/2,153)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, cyto_nucl 2, nucl 1.5, cyto 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019191)
HIX0019191
HIT000726168 (
NR_040108
)
(Conserved hypothetical protein.)
genome : 185,262,184 - 185,275,130 (12,947)
query : 1 - 1,878 (1,878/1,878)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, cyto_nucl 2, nucl 1.5, cyto 1.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019191)
HIX0019191
HIT000611182 (
ENST00000511465
)
(Conserved hypothetical protein.)
genome : 185,262,843 - 185,269,065 (6,223)
query : 1 - 564 (564/564)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 14, cyto 5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019191)
HIX0019191
HIT000039021
(
BC020886
)
(Conserved hypothetical protein.)
genome : 185,262,928 - 185,275,029 (12,102)
query : 1 - 1,033 (1,033/1,059)
3 exons
identity = 0.999
3'(0.996;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, cyto_nucl 2, nucl 1.5, cyto 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019191)
HIX0024666
HIT000046126
(
AK126253
)
Representative transcript
(Conserved hypothetical protein.)
genome : 185,286,341 - 185,291,024 (4,684)
query : 14 - 2,052 (2,039/2,052)
3 exons
identity = 0.998
3'(0.998;0.992;0.998)5'
coverage = 0.994
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024666)
HIX0024666
HIT000612310 (
ENST00000512674
)
(Conserved hypothetical protein.)
genome : 185,286,341 - 185,291,024 (4,684)
query : 1 - 2,040 (2,040/2,040)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 13.5, mito 12, extr_plas 7.5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024666)
HIX0004671
HIT000057581_03
(
BX648934
)
(Interferon regulatory factor 2; IRF-2;)
genome : 185,308,870 - 185,315,734 (6,865)
query : 1 - 6,861 (6,861/6,881)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, mito 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004671)
HIX0004671
HIT000199116 (
NM_002199
)
(Interferon regulatory factor 2; IRF-2;)
genome : 185,308,877 - 185,395,726 (86,850)
query : 1 - 2,285 (2,285/2,302)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004671)
HIX0004671
HIT000477037 (
ENST00000393593
)
(Interferon regulatory factor 2; IRF-2;)
genome : 185,308,867 - 185,395,734 (86,868)
query : 1 - 2,303 (2,303/2,303)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004671)
HIX0004671
HIT000037335
(
BC015803
)
(Interferon regulatory factor 2; IRF-2;)
genome : 185,308,889 - 185,350,225 (41,337)
query : 1 - 2,074 (2,074/2,088)
8 exons
identity = 0.997
3'(0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR001346 : Interferon regulatory factor DNA-binding domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR019817 : Interferon regulatory factor, conserved site
GO :
0000975 : Molecular Function : regulatory region DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004671)
HIX0004671
HIT000321531
(
X15949
)
(Interferon regulatory factor 2; IRF-2;)
genome : 185,308,915 - 185,395,624 (86,710)
query : 1 - 2,144 (2,144/2,144)
9 exons
identity = 0.997
3'(0.997;1.000;1.000;1.000;1.000;1.000;0.990;
1.000;0.989)5'
coverage = 1.000
InterPro :
IPR001346 : Interferon regulatory factor DNA-binding domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR019817 : Interferon regulatory factor, conserved site
GO :
0000975 : Molecular Function : regulatory region DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004671)
HIX0004671
HIT000431819
(
AK312953
)
Representative transcript
(Interferon regulatory factor 2; IRF-2;)
genome : 185,309,912 - 185,395,704 (85,793)
query : 1 - 1,228 (1,228/1,228)
9 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994)5'
coverage = 1.000
InterPro :
IPR001346 : Interferon regulatory factor DNA-binding domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR019817 : Interferon regulatory factor, conserved site
GO :
0000975 : Molecular Function : regulatory region DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004671)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : AJ490936
Mus
sp. (Mouse) : AK036652
Gallus
sp. (Chicken) : BX934799
Pongo
sp. (Orangutan) : CR859739
Rattus
sp. (Rat) : DQ674266
Oryzias
sp. (Medaka) : ENSORLT00000010762
Takifugu
sp. (Fugu) : SINFRUT00000182987
Macaca
sp. (Macaque) : XM_001082794
Pan
sp. (Chimpanzee) : XM_001161882
Monodelphis
sp. (Opossum) : XM_001363845
Equus
sp. (Horse) : XM_001491798
Danio
sp. (Zebrafish) : XM_001920395
Canis
sp. (Dog) : XM_852409
HIX0004671
HIT000100184
(
BT007264
)
(Interferon regulatory factor 2; IRF-2;)
genome : 185,309,913 - 185,350,218 (40,306)
query : 1 - 1,049 (1,049/1,050)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.999
InterPro :
IPR001346 : Interferon regulatory factor DNA-binding domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR019817 : Interferon regulatory factor, conserved site
GO :
0000975 : Molecular Function : regulatory region DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004671)
HIX0004671
HIT000267927
(
CR457077
)
(Interferon regulatory factor 2; IRF-2;)
genome : 185,309,912 - 185,350,218 (40,307)
query : 1 - 1,050 (1,050/1,050)
8 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR001346 : Interferon regulatory factor DNA-binding domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR019817 : Interferon regulatory factor, conserved site
GO :
0000975 : Molecular Function : regulatory region DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004671)
HIX0004671
HIT000605224 (
ENST00000505067
)
(Conserved hypothetical protein.)
genome : 185,310,176 - 185,339,744 (29,569)
query : 1 - 586 (586/586)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 4, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004671)
HIX0004671
HIT000603081 (
ENST00000502750
)
(Interferon regulatory factor 2; IRF-2;)
genome : 185,310,194 - 185,339,785 (29,592)
query : 1 - 339 (339/339)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 11, nucl 5.5, mito 5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004671)
HIX0004671
HIT000607511 (
ENST00000507523
)
(Interferon regulatory factor 2; IRF-2;)
genome : 185,329,312 - 185,395,203 (65,892)
query : 1 - 595 (595/595)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004671)
HIX0004671
HIT000611705 (
ENST00000512020
)
(Interferon regulatory factor 2; IRF-2;)
genome : 185,329,313 - 185,395,702 (66,390)
query : 1 - 731 (731/731)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004671)
HIX0004671
HIT000610569 (
ENST00000510814
)
(Interferon regulatory factor 2; IRF-2;)
genome : 185,329,359 - 185,395,202 (65,844)
query : 1 - 568 (568/568)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004671)
HIX0004671
HIT000606306 (
ENST00000506230
)
(Interferon regulatory factor 2; IRF-2;)
genome : 185,339,321 - 185,395,340 (56,020)
query : 1 - 498 (498/498)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004671)
HIX0004671
HIT000609148 (
ENST00000509274
)
(Interferon regulatory factor 2; IRF-2;)
genome : 185,339,329 - 185,395,201 (55,873)
query : 1 - 591 (591/591)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004671)
HIX0206092
HIT000615472 (
ENST00000516069
)
(Non-protein coding transcript.)
genome : 185,353,120 - 185,353,203 (84)
query : 1 - 84 (84/84)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206092)
HIX0004671
HIT000604567 (
ENST00000504340
)
(Hypothetical protein.)
genome : 185,369,810 - 185,395,702 (25,893)
query : 1 - 565 (565/565)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004671)
HIX0031545
HIT000066070
(
AF075048
)
Representative transcript
(Conserved hypothetical protein.)
genome : 185,377,248 - 185,377,762 (515)
query : 1 - 515 (515/515)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031545)
HIX0183471
pHIT000102972 ( pHIT000102972 )
Representative transcript
(Hypothetical protein.)
genome : 185,378,855 - 185,396,691 (17,837)
query : 1 - 255 (255/255)
2 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0183471)
CAGE tag :
T04R0B119B1F
HIX0216027
HIT000343126
(
DQ409328
)
Representative transcript
(Hypothetical protein.)
genome : 185,395,532 - 185,395,703 (172)
query : 6 - 177 (172/177)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 0.972
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 8, cyto_nucl 7.83333, nucl 6.5,
cyto_pero 4.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216027)
HIX0031836
HIT000307087
(
CR936814
)
Representative transcript
(Conserved hypothetical protein.)
genome : 185,427,282 - 185,436,808 (9,527)
query : 1 - 9,047 (9,047/9,067)
2 exons
identity = 0.998
3'(0.998;0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17.5, mito_nucl 11.5, extr 6, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031836)
HIX0205952
HIT000613048 (
ENST00000513481
)
(H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 family protein.)
genome : 185,480,329 - 185,480,937 (609)
query : 1 - 609 (609/609)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto 13, extr 2, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205952)
HIX0205207
HIT000621847 (
ENST00000522554
)
(Hypothetical short protein.)
genome : 185,505,247 - 185,546,184 (40,938)
query : 1 - 802 (802/802)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 3, mito 3, cyto_mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205207)
HIX0205207
HIT000619621 (
ENST00000520280
)
(Hypothetical short protein.)
genome : 185,540,043 - 185,546,033 (5,991)
query : 1 - 607 (607/607)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205207)
HIX0205207
HIT000618536 (
ENST00000519173
)
(Hypothetical short protein.)
genome : 185,540,200 - 185,546,096 (5,897)
query : 1 - 473 (473/473)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto 2, mito 2, cyto_mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205207)
HIX0004672
HIT000056256
(
BX647609
)
(Caspase-3; CASP-3; EC=3.4.22.56; Apopain; Cysteine protease CPP32; CPP-32; Protein Yama; SREBP cleavage activity 1; SCA-1; Contains: Caspase-3 subunit p17; Contains: Caspase-3 subunit p12; Precursor;)
genome : 185,548,850 - 185,569,746 (20,897)
query : 1 - 2,626 (2,626/2,644)
7 exons
identity = 0.998
3'(0.999;0.994;0.992;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.22.56
InterPro :
IPR001309 : Peptidase C14, ICE, catalytic subunit p20
IPR011600 : Peptidase C14, caspase domain
IPR015470 : Caspase-3
IPR015917 : Peptidase C14A, caspase precursor p45, core
IPR016129 : Peptidase C14, ICE, catalytic subunit p20, active site
IPR029030 : Caspase-like domain
GO :
0004197 : Molecular Function : cysteine-type endopeptidase activity
0005737 : Cellular Component : cytoplasm
0006508 : Biological Process : proteolysis
0006915 : Biological Process : apoptotic process
0008234 : Molecular Function : cysteine-type peptidase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 19, cyto 16.5, nucl 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004672)
HIX0004672
HIT000201098 (
NM_004346
)
(Caspase-3; CASP-3; EC=3.4.22.56; Apopain; Cysteine protease CPP32; CPP-32; Protein Yama; SREBP cleavage activity 1; SCA-1; Contains: Caspase-3 subunit p17; Contains: Caspase-3 subunit p12; Precursor;)
genome : 185,548,850 - 185,570,629 (21,780)
query : 1 - 2,673 (2,673/2,689)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.4.22.56
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, extr 6, E.R. 3, extr_plas 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004672)
HIX0004672
HIT000211053 (
NM_032991
)
(Caspase-3; CASP-3; EC=3.4.22.56; Apopain; Cysteine protease CPP32; CPP-32; Protein Yama; SREBP cleavage activity 1; SCA-1; Contains: Caspase-3 subunit p17; Contains: Caspase-3 subunit p12; Precursor;)
genome : 185,548,850 - 185,570,629 (21,780)
query : 1 - 2,506 (2,506/2,522)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.22.56
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, extr 6, E.R. 3, extr_plas 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004672)
HIX0004672
HIT000037751
(
BC016926
)
Representative transcript
(Caspase-3; CASP-3; EC=3.4.22.56; Apopain; Cysteine protease CPP32; CPP-32; Protein Yama; SREBP cleavage activity 1; SCA-1; Contains: Caspase-3 subunit p17; Contains: Caspase-3 subunit p12; Precursor;)
genome : 185,548,850 - 185,570,581 (21,732)
query : 1 - 2,625 (2,625/2,640)
8 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
0.970)5'
coverage = 1.000
EC number :
EC 3.4.22.56
InterPro :
IPR001309 : Peptidase C14, ICE, catalytic subunit p20
IPR002138 : Peptidase C14, caspase non-catalytic subunit p10
IPR011600 : Peptidase C14, caspase domain
IPR015470 : Caspase-3
IPR015917 : Peptidase C14A, caspase precursor p45, core
IPR016129 : Peptidase C14, ICE, catalytic subunit p20, active site
IPR029030 : Caspase-like domain
GO :
0004197 : Molecular Function : cysteine-type endopeptidase activity
0005737 : Cellular Component : cytoplasm
0006508 : Biological Process : proteolysis
0006915 : Biological Process : apoptotic process
0008234 : Molecular Function : cysteine-type peptidase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, extr 6, E.R. 3, extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004672)
Ortholog candidate ( ->
Evola
)
Oryzias
sp. (Medaka) : AB032608
Canis
sp. (Dog) : AB085580
Macaca
sp. (Macaque) : AB220485
Gallus
sp. (Chicken) : AF083029
Mus
sp. (Mouse) : AK146226
Takifugu
sp. (Fugu) : AY102865
Pan
sp. (Chimpanzee) : AY665274
Danio
sp. (Zebrafish) : BC078310
Rattus
sp. (Rat) : BC081854
Bos
sp. (Cow) : BC123503
Tetraodon
sp. (Tetraodon) : CR731428
Equus
sp. (Horse) : DQ174688
Monodelphis
sp. (Opossum) : DQ296557
Monodelphis
sp. (Opossum) : DQ296558
Danio
sp. (Zebrafish) : DQ812120
Pongo
sp. (Orangutan) : ENSPPYT00000017711
HIX0004672
HIT000623183 (
ENST00000523916
)
(Caspase-3; CASP-3; EC=3.4.22.56; Apopain; Cysteine protease CPP32; CPP-32; Protein Yama; SREBP cleavage activity 1; SCA-1; Contains: Caspase-3 subunit p17; Contains: Caspase-3 subunit p12; Precursor;)
genome : 185,548,850 - 185,570,663 (21,814)
query : 1 - 2,540 (2,540/2,540)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.22.56
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, extr 6, E.R. 3, extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004672)
HIX0004672
HIT000117971 (
ENST00000308394
)
(Caspase-3; CASP-3; EC=3.4.22.56; Apopain; Cysteine protease CPP32; CPP-32; Protein Yama; SREBP cleavage activity 1; SCA-1; Contains: Caspase-3 subunit p17; Contains: Caspase-3 subunit p12; Precursor;)
genome : 185,548,850 - 185,570,629 (21,780)
query : 1 - 2,673 (2,673/2,673)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.4.22.56
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, extr 6, E.R. 3, extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004672)
HIX0004672
HIT000477029 (
ENST00000393585
)
(Caspase-3; CASP-3; EC=3.4.22.56; Apopain; Cysteine protease CPP32; CPP-32; Protein Yama; SREBP cleavage activity 1; SCA-1; Contains: Caspase-3 subunit p17; Contains: Caspase-3 subunit p12; Precursor;)
genome : 185,548,850 - 185,569,746 (20,897)
query : 1 - 2,624 (2,624/2,624)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.22.56
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 19, cyto 16.5, nucl 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004672)
HIX0004672
HIT000218149
(
U13737
)
(Caspase-3; CASP-3; EC=3.4.22.56; Apopain; Cysteine protease CPP32; CPP-32; Protein Yama; SREBP cleavage activity 1; SCA-1; Contains: Caspase-3 subunit p17; Contains: Caspase-3 subunit p12; Precursor;)
genome : 185,548,851 - 185,570,579 (21,729)
query : 12 - 2,635 (2,624/2,635)
8 exons
identity = 0.997
3'(0.997;0.992;1.000;1.000;1.000;1.000;1.000;
0.968)5'
coverage = 0.996
EC number :
EC 3.4.22.56
InterPro :
IPR001309 : Peptidase C14, ICE, catalytic subunit p20
IPR002138 : Peptidase C14, caspase non-catalytic subunit p10
IPR011600 : Peptidase C14, caspase domain
IPR015470 : Caspase-3
IPR015917 : Peptidase C14A, caspase precursor p45, core
IPR016129 : Peptidase C14, ICE, catalytic subunit p20, active site
IPR029030 : Caspase-like domain
GO :
0004197 : Molecular Function : cysteine-type endopeptidase activity
0005737 : Cellular Component : cytoplasm
0006508 : Biological Process : proteolysis
0006915 : Biological Process : apoptotic process
0008234 : Molecular Function : cysteine-type peptidase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, extr 6, E.R. 3, extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004672)
HIX0004672
HIT000424134
(
AK291337
)
(Caspase-3; CASP-3; EC=3.4.22.56; Apopain; Cysteine protease CPP32; CPP-32; Protein Yama; SREBP cleavage activity 1; SCA-1; Contains: Caspase-3 subunit p17; Contains: Caspase-3 subunit p12; Precursor;)
genome : 185,549,935 - 185,570,600 (20,666)
query : 1 - 1,559 (1,559/1,559)
8 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
0.981)5'
coverage = 1.000
EC number :
EC 3.4.22.56
InterPro :
IPR001309 : Peptidase C14, ICE, catalytic subunit p20
IPR002138 : Peptidase C14, caspase non-catalytic subunit p10
IPR011600 : Peptidase C14, caspase domain
IPR015470 : Caspase-3
IPR015917 : Peptidase C14A, caspase precursor p45, core
IPR016129 : Peptidase C14, ICE, catalytic subunit p20, active site
IPR029030 : Caspase-like domain
GO :
0004197 : Molecular Function : cysteine-type endopeptidase activity
0005737 : Cellular Component : cytoplasm
0006508 : Biological Process : proteolysis
0006915 : Biological Process : apoptotic process
0008234 : Molecular Function : cysteine-type peptidase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, extr 6, E.R. 3, extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004672)
HIX0004672
HIT000218150
(
U13738
)
(Caspase-3; CASP-3; EC=3.4.22.56; Apopain; Cysteine protease CPP32; CPP-32; Protein Yama; SREBP cleavage activity 1; SCA-1; Contains: Caspase-3 subunit p17; Contains: Caspase-3 subunit p12; Precursor;)
genome : 185,550,322 - 185,570,579 (20,258)
query : 18 - 1,001 (984/1,001)
7 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;0.992;1.000;0.968)5'
coverage = 0.983
EC number :
EC 3.4.22.56
InterPro :
IPR001309 : Peptidase C14, ICE, catalytic subunit p20
IPR002138 : Peptidase C14, caspase non-catalytic subunit p10
IPR011600 : Peptidase C14, caspase domain
IPR015470 : Caspase-3
IPR015917 : Peptidase C14A, caspase precursor p45, core
IPR016129 : Peptidase C14, ICE, catalytic subunit p20, active site
IPR029030 : Caspase-like domain
GO :
0004197 : Molecular Function : cysteine-type endopeptidase activity
0005737 : Cellular Component : cytoplasm
0006508 : Biological Process : proteolysis
0006915 : Biological Process : apoptotic process
0008234 : Molecular Function : cysteine-type peptidase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, extr 6, E.R. 3, extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004672)
HIX0004672
HIT000616910 (
ENST00000517513
)
(Caspase-3; CASP-3; EC=3.4.22.56; Apopain; Cysteine protease CPP32; CPP-32; Protein Yama; SREBP cleavage activity 1; SCA-1; Contains: Caspase-3 subunit p17; Contains: Caspase-3 subunit p12; Precursor;)
genome : 185,550,410 - 185,570,601 (20,192)
query : 1 - 964 (964/964)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.22.56
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, extr 4, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004672)
HIX0004672
HIT000218828
(
U26943
)
(Caspase-3; CASP-3; EC=3.4.22.56; Apopain; Cysteine protease CPP32; CPP-32; Protein Yama; SREBP cleavage activity 1; SCA-1; Contains: Caspase-3 subunit p17; Contains: Caspase-3 subunit p12; Precursor;)
genome : 185,550,426 - 185,559,607 (9,182)
query : 1 - 834 (834/834)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.22.56
InterPro :
IPR001309 : Peptidase C14, ICE, catalytic subunit p20
IPR002138 : Peptidase C14, caspase non-catalytic subunit p10
IPR011600 : Peptidase C14, caspase domain
IPR015470 : Caspase-3
IPR015917 : Peptidase C14A, caspase precursor p45, core
IPR016129 : Peptidase C14, ICE, catalytic subunit p20, active site
IPR029030 : Caspase-like domain
GO :
0004197 : Molecular Function : cysteine-type endopeptidase activity
0005737 : Cellular Component : cytoplasm
0006508 : Biological Process : proteolysis
0006915 : Biological Process : apoptotic process
0008234 : Molecular Function : cysteine-type peptidase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, extr 6, E.R. 3, extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004672)
HIX0004672
HIT000247616
(
AJ413269
)
(Caspase-3; CASP-3; EC=3.4.22.56; Apopain; Cysteine protease CPP32; CPP-32; Protein Yama; SREBP cleavage activity 1; SCA-1; Contains: Caspase-3 subunit p17; Contains: Caspase-3 subunit p12; Precursor;)
genome : 185,550,426 - 185,559,607 (9,182)
query : 1 - 834 (834/834)
6 exons
identity = 0.993
3'(1.000;0.992;1.000;1.000;0.960;1.000)5'
coverage = 1.000
EC number :
EC 3.4.22.56
InterPro :
IPR001309 : Peptidase C14, ICE, catalytic subunit p20
IPR002138 : Peptidase C14, caspase non-catalytic subunit p10
IPR011600 : Peptidase C14, caspase domain
IPR015470 : Caspase-3
IPR015917 : Peptidase C14A, caspase precursor p45, core
IPR016129 : Peptidase C14, ICE, catalytic subunit p20, active site
IPR029030 : Caspase-like domain
GO :
0004197 : Molecular Function : cysteine-type endopeptidase activity
0005737 : Cellular Component : cytoplasm
0006508 : Biological Process : proteolysis
0006915 : Biological Process : apoptotic process
0008234 : Molecular Function : cysteine-type peptidase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, extr 5, E.R. 3, nucl 2, mito 2, mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004672)
HIX0004672
HIT000477032 (
ENST00000393588
)
(Caspase-3; CASP-3; EC=3.4.22.56; Apopain; Cysteine protease CPP32; CPP-32; Protein Yama; SREBP cleavage activity 1; SCA-1; Contains: Caspase-3 subunit p17; Contains: Caspase-3 subunit p12; Precursor;)
genome : 185,550,538 - 185,570,609 (20,072)
query : 1 - 677 (677/677)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.22.56
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, extr 4, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004672)
HIX0004672
HIT000545055 (
ENST00000447121
)
(Caspase-3; CASP-3; EC=3.4.22.56; Apopain; Cysteine protease CPP32; CPP-32; Protein Yama; SREBP cleavage activity 1; SCA-1; Contains: Caspase-3 subunit p17; Contains: Caspase-3 subunit p12; Precursor;)
genome : 185,553,050 - 185,570,601 (17,552)
query : 1 - 549 (549/549)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.22.56
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 14, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004672)
HIX0004673
HIT000213938 (
NM_152683
)
(DNA primase, small subunit family protein.)
genome : 185,570,767 - 185,616,112 (45,346)
query : 1 - 2,295 (2,295/2,295)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;0.993;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 15.5, cyto 14.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004673)
HIX0004673
HIT000120345 (
ENST00000314970
)
(DNA primase, small subunit family protein.)
genome : 185,570,767 - 185,616,106 (45,340)
query : 1 - 2,289 (2,289/2,289)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 15.5, cyto 14.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004673)
HIX0004673
HIT000098604
(
BC047467
)
(Conserved hypothetical protein.)
genome : 185,570,821 - 185,616,113 (45,293)
query : 1 - 2,003 (2,003/2,018)
13 exons
identity = 0.995
5'(0.996;0.987;1.000;1.000;0.986;1.000;0.994;
1.000;1.000;1.000;1.000;1.000;0.989)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 12.6667, cyto_plas 10.8333, extr 6,
nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004673)
HIX0004673
HIT000615183 (
ENST00000515774
)
(DNA primase, UL52/UL70 type, Herpesviridae family protein.)
genome : 185,570,821 - 185,616,117 (45,297)
query : 1 - 2,007 (2,007/2,007)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, nucl 7, mito 6, lyso 3, golg 3, E.R._mito 3,
mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004673)
HIX0004673
HIT000604018 (
ENST00000503752
)
(DNA primase, small subunit family protein.)
genome : 185,570,849 - 185,616,070 (45,222)
query : 1 - 2,168 (2,168/2,168)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 15.5, cyto 14.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004673)
HIX0004673
HIT000056222
(
BX647575
)
Representative transcript
(Coiled-coil domain-containing protein 111;)
genome : 185,570,879 - 185,616,104 (45,226)
query : 1 - 2,172 (2,172/2,190)
14 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.993;1.000;
0.994;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002755 : DNA primase, small subunit
IPR004340 : DNA primase, UL52/UL70 type, Herpesviridae
GO :
0003896 : Molecular Function : DNA primase activity
0006260 : Biological Process : DNA replication
0006269 : Biological Process : DNA replication, synthesis of RNA primer
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 15.5, cyto 14.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004673)
HIX0004673
HIT000612454 (
ENST00000512834
)
(DNA primase, small subunit family protein.)
genome : 185,570,879 - 185,616,106 (45,228)
query : 1 - 2,174 (2,174/2,174)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 15.5, cyto 14.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004673)
HIX0004673
HIT000089813
(
BC018930
)
(Coiled-coil domain-containing protein 111.)
genome : 185,570,892 - 185,616,104 (45,213)
query : 1 - 1,629 (1,629/1,664)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 11.5, cyto_nucl 8.5, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004673)
HIX0004673
HIT000608894 (
ENST00000509002
)
(Conserved hypothetical protein.)
genome : 185,570,892 - 185,616,106 (45,215)
query : 1 - 1,631 (1,631/1,631)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 11.5, cyto_nucl 8.5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004673)
HIX0004673
HIT000014336
(
AK057729
)
(Coiled-coil domain-containing protein 111;)
genome : 185,570,902 - 185,616,112 (45,211)
query : 1 - 2,078 (2,078/2,078)
14 exons
identity = 0.998
5'(0.975;0.987;1.000;1.000;1.000;0.993;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002755 : DNA primase, small subunit
IPR004340 : DNA primase, UL52/UL70 type, Herpesviridae
GO :
0003896 : Molecular Function : DNA primase activity
0006260 : Biological Process : DNA replication
0006269 : Biological Process : DNA replication, synthesis of RNA primer
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 15.5, cyto 14.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004673)
HIX0004673
HIT000609398 (
ENST00000509538
)
(Conserved hypothetical protein.)
genome : 185,570,910 - 185,578,808 (7,899)
query : 1 - 804 (804/804)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 14.5, nucl 9, extr 3, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004673)
HIX0004673
HIT000261519
(
BC064600
)
(Coiled-coil domain-containing protein 111;)
genome : 185,570,926 - 185,616,104 (45,179)
query : 1 - 2,128 (2,128/2,167)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;0.993;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002755 : DNA primase, small subunit
IPR004340 : DNA primase, UL52/UL70 type, Herpesviridae
GO :
0003896 : Molecular Function : DNA primase activity
0006260 : Biological Process : DNA replication
0006269 : Biological Process : DNA replication, synthesis of RNA primer
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 15.5, cyto 14.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004673)
HIX0004673
HIT000426183
(
AK307317
)
(Conserved hypothetical protein.)
genome : 185,570,931 - 185,599,540 (28,610)
query : 1 - 1,138 (1,138/1,138)
7 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.993;0.997;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 8, cyto_nucl 7, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004673)
HIX0004673
HIT000606350 (
ENST00000506278
)
(Conserved hypothetical protein.)
genome : 185,570,931 - 185,599,540 (28,610)
query : 1 - 1,138 (1,138/1,138)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 8, cyto_nucl 7, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004673)
HIX0004673
HIT000614602 (
ENST00000515152
)
(Conserved hypothetical protein.)
genome : 185,570,935 - 185,593,422 (22,488)
query : 1 - 784 (784/784)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 8, cyto_nucl 7, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004673)
HIX0004673
HIT000607961 (
ENST00000508001
)
(DNA primase, UL52/UL70 type, Herpesviridae family protein.)
genome : 185,599,431 - 185,615,746 (16,316)
query : 1 - 518 (518/518)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 11.5, nucl 5.5, extr 5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004673)
HIX0004673
HIT000612296 (
ENST00000512658
)
(DNA primase, UL52/UL70 type, Herpesviridae family protein.)
genome : 185,612,522 - 185,615,912 (3,391)
query : 1 - 498 (498/498)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 11.5, cyto 10, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004673)
HIX0200633
HIT000243633
(
AF516710
)
Representative transcript
(Centromere protein U; CENP-U; Interphase centromere complex protein 24; KSHV latent nuclear antigen-interacting protein 1; MLF1-interacting protein; Polo-box-interacting protein 1; centromere protein of 50 kDa; CENP-50;)
genome : 185,615,234 - 185,667,209 (51,976)
query : 1 - 2,951 (2,951/2,973)
14 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR025214 : Centromere protein U
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200633)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AB233421
Mus
sp. (Mouse) : BC094675
Rattus
sp. (Rat) : BC097399
Macaca
sp. (Macaque) : ENSMMUT00000017053
Pongo
sp. (Orangutan) : ENSPPYT00000017714
Pan
sp. (Chimpanzee) : XM_001162336
Equus
sp. (Horse) : XM_001491142
Canis
sp. (Dog) : XM_844599
Bos
sp. (Cow) : XM_870192
HIX0200633
HIT000209335 (
NM_024629
)
(Centromere protein U; CENP-U; Interphase centromere complex protein 24; KSHV latent nuclear antigen-interacting protein 1; MLF1-interacting protein; Polo-box-interacting protein 1; centromere protein of 50 kDa; CENP-50;)
genome : 185,615,219 - 185,655,286 (40,068)
query : 1 - 2,550 (2,550/2,554)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200633)
HIX0004673
HIT000610617 (
ENST00000510864
)
(Conserved hypothetical protein.)
genome : 185,615,447 - 185,616,106 (660)
query : 1 - 509 (509/509)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 13, extr 7, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004673)
HIX0200633
HIT000112092 (
ENST00000281453
)
(Centromere protein U; CENP-U; Interphase centromere complex protein 24; KSHV latent nuclear antigen-interacting protein 1; MLF1-interacting protein; Polo-box-interacting protein 1; centromere protein of 50 kDa; CENP-50;)
genome : 185,615,772 - 185,655,287 (39,516)
query : 1 - 1,998 (1,998/1,998)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200633)
HIX0200633
HIT000390519
(
BC131556
)
(Centromere protein U; CENP-U; Interphase centromere complex protein 24; KSHV latent nuclear antigen-interacting protein 1; MLF1-interacting protein; Polo-box-interacting protein 1; centromere protein of 50 kDa; CENP-50;)
genome : 185,615,772 - 185,655,286 (39,515)
query : 1 - 1,997 (1,997/1,997)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR025214 : Centromere protein U
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200633)
HIX0200633
HIT000010395
(
AK027121
)
(Centromere protein U.)
genome : 185,616,157 - 185,650,164 (34,008)
query : 2 - 1,422 (1,421/1,482)
11 exons
identity = 0.999
3'(1.000;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR025214 : Centromere protein U
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200633)
HIX0200633
HIT000338874
(
BC107744
)
(Centromere protein U.)
genome : 185,616,148 - 185,637,680 (21,533)
query : 4 - 1,066 (1,063/1,097)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.995
InterPro :
IPR025214 : Centromere protein U
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 5, extr 4, mito 2, cysk 2, extr_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200633)
HIX0200633
HIT000041302
(
BC031520
)
(Centromere protein U.)
genome : 185,616,157 - 185,637,586 (21,430)
query : 1 - 960 (960/989)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR025214 : Centromere protein U
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 16, nucl 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200633)
HIX0200633
HIT000435209
(
BC141854
)
(Centromere protein U.)
genome : 185,616,156 - 185,655,284 (39,129)
query : 1 - 1,549 (1,549/1,570)
12 exons
identity = 0.996
3'(0.998;1.000;1.000;1.000;1.000;0.986;0.996;
1.000;0.991;0.992;1.000;0.991)5'
coverage = 0.995
InterPro :
IPR025214 : Centromere protein U
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200633)
HIX0200633
HIT000262770
(
BC067802
)
(Centromere protein U.)
genome : 185,616,157 - 185,655,226 (39,070)
query : 1 - 1,490 (1,490/1,504)
12 exons
identity = 0.996
3'(0.995;1.000;1.000;1.000;1.000;0.986;0.996;
1.000;1.000;0.992;1.000;0.982)5'
coverage = 1.000
InterPro :
IPR025214 : Centromere protein U
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200633)
HIX0200633
HIT000609962 (
ENST00000510146
)
(Centromere protein U; CENP-U; Interphase centromere complex protein 24; KSHV latent nuclear antigen-interacting protein 1; MLF1-interacting protein; Polo-box-interacting protein 1; centromere protein of 50 kDa; CENP-50;)
genome : 185,616,156 - 185,655,284 (39,129)
query : 1 - 1,549 (1,549/1,549)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200633)
HIX0200633
HIT000243163
(
AF469667
)
(Centromere protein U; CENP-U; Interphase centromere complex protein 24; KSHV latent nuclear antigen-interacting protein 1; MLF1-interacting protein; Polo-box-interacting protein 1; centromere protein of 50 kDa; CENP-50;)
genome : 185,616,159 - 185,655,286 (39,128)
query : 4 - 1,613 (1,610/1,613)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR025214 : Centromere protein U
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200633)
HIX0200633
HIT000602816 (
ENST00000502461
)
(Centromere protein U.)
genome : 185,616,283 - 185,619,250 (2,968)
query : 1 - 723 (723/723)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200633)
HIX0200633
HIT000425094
(
AK292297
)
(Centromere protein U; CENP-U; Interphase centromere complex protein 24; KSHV latent nuclear antigen-interacting protein 1; MLF1-interacting protein; Polo-box-interacting protein 1; centromere protein of 50 kDa; CENP-50;)
genome : 185,616,352 - 185,655,232 (38,881)
query : 1 - 1,363 (1,363/1,363)
13 exons
identity = 0.996
3'(0.995;0.994;1.000;1.000;1.000;1.000;1.000;
0.996;1.000;1.000;1.000;1.000;0.968)5'
coverage = 1.000
InterPro :
IPR025214 : Centromere protein U
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200633)
HIX0200633
HIT000268226
(
CR457376
)
(Centromere protein U.)
genome : 185,616,446 - 185,631,296 (14,851)
query : 1 - 527 (527/531)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.992
InterPro :
IPR025214 : Centromere protein U
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 16, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200633)
HIX0200633
HIT000608046 (
ENST00000508095
)
(Centromere protein U.)
genome : 185,616,503 - 185,623,635 (7,133)
query : 1 - 665 (665/665)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, extr 1, cyto 1, mito 1, cysk 1, cyto_mito 1
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200633)
HIX0200633
HIT000394001
(
DQ907911
)
(Centromere protein U.)
genome : 185,618,919 - 185,655,216 (36,298)
query : 1 - 963 (963/963)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR025214 : Centromere protein U
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200633)
HIX0200633
HIT000606597 (
ENST00000506535
)
(Centromere protein U.)
genome : 185,619,348 - 185,635,095 (15,748)
query : 1 - 585 (585/585)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 16.1667, cyto_plas 11.6667, extr 5,
nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200633)
HIX0200633
HIT000394000
(
DQ907910
)
(Centromere protein U.)
genome : 185,620,729 - 185,655,216 (34,488)
query : 1 - 1,014 (1,014/1,014)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR025214 : Centromere protein U
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200633)
HIX0200633
HIT000641016 (
ENST00000541971
)
(Centromere protein U.)
genome : 185,620,729 - 185,655,216 (34,488)
query : 1 - 1,014 (1,014/1,014)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200633)
HIX0200633
HIT000614251 (
ENST00000514781
)
(Centromere protein U.)
genome : 185,637,551 - 185,654,568 (17,018)
query : 1 - 688 (688/688)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16, nucl 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200633)
HIX0004674
HIT000093101
(
BC033479
)
(Long-chain-fatty-acid--CoA ligase 5; EC=6.2.1.3; Long-chain acyl-CoA synthetase 5; LACS 5;)
genome : 185,676,754 - 185,680,030 (3,277)
query : 1 - 2,796 (2,796/2,891)
3 exons
identity = 0.998
3'(0.998;1.000;0.998)5'
coverage = 1.000
EC number :
EC 6.2.1.3
KEGG pathway :
00071 : Fatty acid metabolism (28)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 9.5, cyto 8, mito 8, extr_plas 7,
E.R._mito 5.33333, mito_pero 5.33333, extr 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004674)
HIX0004674
HIT000091250
(
BC026290
)
(Long-chain-fatty-acid--CoA ligase 1; EC=6.2.1.3; Acyl-CoA synthetase 1; ACS1; Long-chain acyl-CoA synthetase 1; LACS 1; Long-chain acyl-CoA synthetase 2; LACS 2; Long-chain fatty acid-CoA ligase 2; Palmitoyl-CoA ligase 1; Palmitoyl-CoA ligase 2;)
genome : 185,676,755 - 185,698,139 (21,385)
query : 1 - 3,147 (3,147/3,178)
16 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000;1.000;0.986;
1.000;0.993;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.999
EC number :
EC 6.2.1.3
KEGG pathway :
00071 : Fatty acid metabolism (28)
01100 : Metabolic pathways (1346)
InterPro :
IPR000873 : AMP-dependent synthetase/ligase
IPR020845 : AMP-binding, conserved site
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10, E.R._mito 7.66667, E.R. 7.5, mito 6.5,
cyto_nucl 6.5, mito_pero 4.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004674)
HIX0004674
HIT000198923 (
NM_001995
)
(Long-chain-fatty-acid--CoA ligase 1; EC=6.2.1.3; Acyl-CoA synthetase 1; ACS1; Long-chain acyl-CoA synthetase 1; LACS 1; Long-chain acyl-CoA synthetase 2; LACS 2; Long-chain fatty acid-CoA ligase 2; Palmitoyl-CoA ligase 1; Palmitoyl-CoA ligase 2;)
genome : 185,676,749 - 185,747,215 (70,467)
query : 1 - 3,805 (3,805/3,822)
21 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.2.1.3
KEGG pathway :
00071 : Fatty acid metabolism (28)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_mito 11, mito_pero 4.83333, pero 4.5,
nucl 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004674)
HIX0004674
HIT000552637 (
ENST00000454703
)
(Long-chain-fatty-acid--CoA ligase 1; EC=6.2.1.3; Acyl-CoA synthetase 1; ACS1; Long-chain acyl-CoA synthetase 1; LACS 1; Long-chain acyl-CoA synthetase 2; LACS 2; Long-chain fatty acid-CoA ligase 2; Palmitoyl-CoA ligase 1; Palmitoyl-CoA ligase 2;)
genome : 185,676,749 - 185,747,273 (70,525)
query : 1 - 3,636 (3,636/3,636)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.2.1.3
KEGG pathway :
00071 : Fatty acid metabolism (28)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 9.5, nucl 8.5, cyto_nucl 8.5, cyto 7.5,
mito_pero 6, plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004674)
HIX0004674
HIT000614491 (
ENST00000515030
)
(Long-chain-fatty-acid--CoA ligase 1; EC=6.2.1.3; Acyl-CoA synthetase 1; ACS1; Long-chain acyl-CoA synthetase 1; LACS 1; Long-chain acyl-CoA synthetase 2; LACS 2; Long-chain fatty acid-CoA ligase 2; Palmitoyl-CoA ligase 1; Palmitoyl-CoA ligase 2;)
genome : 185,676,754 - 185,747,972 (71,219)
query : 1 - 3,948 (3,948/3,948)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.2.1.3
KEGG pathway :
00071 : Fatty acid metabolism (28)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_mito 11, mito_pero 4.83333, pero 4.5,
nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004674)
HIX0004674
HIT000612605 (
ENST00000513001
)
(Long-chain-fatty-acid--CoA ligase 1; EC=6.2.1.3; Acyl-CoA synthetase 1; ACS1; Long-chain acyl-CoA synthetase 1; LACS 1; Long-chain acyl-CoA synthetase 2; LACS 2; Long-chain fatty acid-CoA ligase 2; Palmitoyl-CoA ligase 1; Palmitoyl-CoA ligase 2;)
genome : 185,676,754 - 185,680,030 (3,277)
query : 1 - 2,796 (2,796/2,796)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.2.1.3
KEGG pathway :
00071 : Fatty acid metabolism (28)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 9.5, cyto 8, mito 8, extr_plas 7,
E.R._mito 5.33333, mito_pero 5.33333, extr 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004674)
HIX0004674
HIT000112093 (
ENST00000281455
)
(Long-chain-fatty-acid--CoA ligase 1; EC=6.2.1.3; Acyl-CoA synthetase 1; ACS1; Long-chain acyl-CoA synthetase 1; LACS 1; Long-chain acyl-CoA synthetase 2; LACS 2; Long-chain fatty acid-CoA ligase 2; Palmitoyl-CoA ligase 1; Palmitoyl-CoA ligase 2;)
genome : 185,676,755 - 185,747,248 (70,494)
query : 1 - 3,832 (3,832/3,832)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.2.1.3
KEGG pathway :
00071 : Fatty acid metabolism (28)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_mito 11, mito_pero 4.83333, pero 4.5,
nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004674)
HIX0004674
HIT000100416
(
D10040
)
(Long-chain-fatty-acid--CoA ligase 1; EC=6.2.1.3; Acyl-CoA synthetase 1; ACS1; Long-chain acyl-CoA synthetase 1; LACS 1; Long-chain acyl-CoA synthetase 2; LACS 2; Long-chain fatty acid-CoA ligase 2; Palmitoyl-CoA ligase 1; Palmitoyl-CoA ligase 2;)
genome : 185,676,755 - 185,724,681 (47,927)
query : 1 - 3,634 (3,634/3,634)
20 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;0.986;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.2.1.3
KEGG pathway :
00071 : Fatty acid metabolism (28)
01100 : Metabolic pathways (1346)
InterPro :
IPR000873 : AMP-dependent synthetase/ligase
IPR020845 : AMP-binding, conserved site
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_mito 11, mito_pero 4.83333, pero 4.5,
nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004674)
HIX0004674
HIT000020972
(
AK096117
)
(Long-chain-fatty-acid--CoA ligase 1; EC=6.2.1.3; Acyl-CoA synthetase 1; ACS1; Long-chain acyl-CoA synthetase 1; LACS 1; Long-chain acyl-CoA synthetase 2; LACS 2; Long-chain fatty acid-CoA ligase 2; Palmitoyl-CoA ligase 1; Palmitoyl-CoA ligase 2;)
genome : 185,676,755 - 185,687,856 (11,102)
query : 1 - 2,409 (2,409/2,409)
9 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.2.1.3
KEGG pathway :
00071 : Fatty acid metabolism (28)
01100 : Metabolic pathways (1346)
InterPro :
IPR000873 : AMP-dependent synthetase/ligase
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, plas 8, extr 3, mito 3, mito_pero 3, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004674)
HIX0004674
HIT000603697 (
ENST00000503407
)
(Long-chain-fatty-acid--CoA ligase 1; EC=6.2.1.3; Acyl-CoA synthetase 1; ACS1; Long-chain acyl-CoA synthetase 1; LACS 1; Long-chain acyl-CoA synthetase 2; LACS 2; Long-chain fatty acid-CoA ligase 2; Palmitoyl-CoA ligase 1; Palmitoyl-CoA ligase 2;)
genome : 185,676,755 - 185,687,856 (11,102)
query : 1 - 2,409 (2,409/2,409)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.2.1.3
KEGG pathway :
00071 : Fatty acid metabolism (28)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, plas 8, extr 3, mito 3, mito_pero 3, E.R. 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004674)
HIX0004674
HIT000191970
(
L09229
)
(Long-chain-fatty-acid--CoA ligase 1; EC=6.2.1.3; Acyl-CoA synthetase 1; ACS1; Long-chain acyl-CoA synthetase 1; LACS 1; Long-chain acyl-CoA synthetase 2; LACS 2; Long-chain fatty acid-CoA ligase 2; Palmitoyl-CoA ligase 1; Palmitoyl-CoA ligase 2;)
genome : 185,677,263 - 185,724,702 (47,440)
query : 41 - 3,185 (3,145/3,188)
20 exons
identity = 0.980
3'(0.978;1.000;1.000;1.000;0.991;0.924;0.973;
1.000;0.970;1.000;1.000;1.000;1.000;1.000;
0.983;1.000;1.000;1.000;0.974;0.927)5'
coverage = 0.987
EC number :
EC 6.2.1.3
KEGG pathway :
00071 : Fatty acid metabolism (28)
01100 : Metabolic pathways (1346)
InterPro :
IPR000873 : AMP-dependent synthetase/ligase
IPR020845 : AMP-binding, conserved site
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 12.5, pero 4.5, mito_pero 4.5,
nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004674)
HIX0004674
HIT000425595
(
AK292798
)
(Long-chain-fatty-acid--CoA ligase 1; EC=6.2.1.3; Acyl-CoA synthetase 1; ACS1; Long-chain acyl-CoA synthetase 1; LACS 1; Long-chain acyl-CoA synthetase 2; LACS 2; Long-chain fatty acid-CoA ligase 2; Palmitoyl-CoA ligase 1; Palmitoyl-CoA ligase 2;)
genome : 185,677,801 - 185,747,122 (69,322)
query : 1 - 2,660 (2,660/2,660)
21 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.994;1.000;0.990;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.2.1.3
KEGG pathway :
00071 : Fatty acid metabolism (28)
01100 : Metabolic pathways (1346)
InterPro :
IPR000873 : AMP-dependent synthetase/ligase
IPR020845 : AMP-binding, conserved site
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_mito 11, mito_pero 4.83333, pero 4.5,
nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004674)
HIX0004674
HIT000498110
(
AK303486
)
(Long-chain-fatty-acid--CoA ligase 1; EC=6.2.1.3; Acyl-CoA synthetase 1; ACS1; Long-chain acyl-CoA synthetase 1; LACS 1; Long-chain acyl-CoA synthetase 2; LACS 2; Long-chain fatty acid-CoA ligase 2; Palmitoyl-CoA ligase 1; Palmitoyl-CoA ligase 2;)
genome : 185,677,935 - 185,747,188 (69,254)
query : 1 - 2,490 (2,490/2,490)
20 exons
identity = 0.997
3'(0.994;1.000;1.000;1.000;1.000;1.000;0.973;
1.000;0.993;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.992)5'
coverage = 1.000
EC number :
EC 6.2.1.3
KEGG pathway :
00071 : Fatty acid metabolism (28)
01100 : Metabolic pathways (1346)
InterPro :
IPR000873 : AMP-dependent synthetase/ligase
IPR020845 : AMP-binding, conserved site
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_mito 10.5, mito_pero 4.83333,
pero 4.5, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004674)
HIX0004674
HIT000607294 (
ENST00000507295
)
(Long-chain-fatty-acid--CoA ligase 1; EC=6.2.1.3; Acyl-CoA synthetase 1; ACS1; Long-chain acyl-CoA synthetase 1; LACS 1; Long-chain acyl-CoA synthetase 2; LACS 2; Long-chain fatty acid-CoA ligase 2; Palmitoyl-CoA ligase 1; Palmitoyl-CoA ligase 2;)
genome : 185,677,935 - 185,747,188 (69,254)
query : 1 - 2,490 (2,490/2,490)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.2.1.3
KEGG pathway :
00071 : Fatty acid metabolism (28)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_mito 10.5, mito_pero 4.83333,
pero 4.5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004674)
HIX0004674
HIT000491174
(
AK296550
)
(Long-chain-fatty-acid--CoA ligase 1; EC=6.2.1.3; Acyl-CoA synthetase 1; ACS1; Long-chain acyl-CoA synthetase 1; LACS 1; Long-chain acyl-CoA synthetase 2; LACS 2; Long-chain fatty acid-CoA ligase 2; Palmitoyl-CoA ligase 1; Palmitoyl-CoA ligase 2;)
genome : 185,678,057 - 185,729,605 (51,549)
query : 1 - 2,646 (2,646/2,646)
22 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000;1.000;0.986;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.990;1.000;1.000;1.000;0.996;
1.000)5'
coverage = 1.000
EC number :
EC 6.2.1.3
KEGG pathway :
00071 : Fatty acid metabolism (28)
01100 : Metabolic pathways (1346)
InterPro :
IPR000873 : AMP-dependent synthetase/ligase
IPR020845 : AMP-binding, conserved site
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, E.R._mito 7.66667, E.R. 7.5, mito 6.5,
cyto_plas 6.5, cyto_golg 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004674)
HIX0004674
HIT000535599 (
ENST00000437665
)
(Long-chain-fatty-acid--CoA ligase 1; EC=6.2.1.3; Acyl-CoA synthetase 1; ACS1; Long-chain acyl-CoA synthetase 1; LACS 1; Long-chain acyl-CoA synthetase 2; LACS 2; Long-chain fatty acid-CoA ligase 2; Palmitoyl-CoA ligase 1; Palmitoyl-CoA ligase 2;)
genome : 185,678,057 - 185,729,605 (51,549)
query : 1 - 2,646 (2,646/2,646)
22 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 6.2.1.3
KEGG pathway :
00071 : Fatty acid metabolism (28)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, E.R._mito 7.66667, E.R. 7.5, mito 6.5,
cyto_plas 6.5, cyto_golg 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004674)
HIX0004674
HIT000606783 (
ENST00000506733
)
(Long-chain-fatty-acid--CoA ligase 1; EC=6.2.1.3; Acyl-CoA synthetase 1; ACS1; Long-chain acyl-CoA synthetase 1; LACS 1; Long-chain acyl-CoA synthetase 2; LACS 2; Long-chain fatty acid-CoA ligase 2; Palmitoyl-CoA ligase 1; Palmitoyl-CoA ligase 2;)
genome : 185,678,057 - 185,729,605 (51,549)
query : 1 - 2,646 (2,646/2,646)
22 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 6.2.1.3
KEGG pathway :
00071 : Fatty acid metabolism (28)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, E.R._mito 7.66667, E.R. 7.5, mito 6.5,
cyto_plas 6.5, cyto_golg 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004674)
HIX0004674
HIT000053393
(
BC050073
)
Representative transcript
(Long-chain-fatty-acid--CoA ligase 1; EC=6.2.1.3; Acyl-CoA synthetase 1; ACS1; Long-chain acyl-CoA synthetase 1; LACS 1; Long-chain acyl-CoA synthetase 2; LACS 2; Long-chain fatty acid-CoA ligase 2; Palmitoyl-CoA ligase 1; Palmitoyl-CoA ligase 2;)
genome : 185,678,176 - 185,733,413 (55,238)
query : 1 - 2,332 (2,332/2,347)
21 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.986;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.996;1.000)5'
coverage = 1.000
EC number :
EC 6.2.1.3
KEGG pathway :
00071 : Fatty acid metabolism (28)
01100 : Metabolic pathways (1346)
InterPro :
IPR000873 : AMP-dependent synthetase/ligase
IPR020845 : AMP-binding, conserved site
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_mito 11, mito_pero 4.83333, pero 4.5,
nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004674)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB172929
Gallus
sp. (Chicken) : AJ851480
Mus
sp. (Mouse) : AK145900
Danio
sp. (Zebrafish) : BC100000
Bos
sp. (Cow) : BC119914
Tetraodon
sp. (Tetraodon) : CR653305
Pongo
sp. (Orangutan) : CR858879
Rattus
sp. (Rat) : D90109
Equus
sp. (Horse) : ENSECAT00000010549
Monodelphis
sp. (Opossum) : ENSMODT00000013106
Oryzias
sp. (Medaka) : ENSORLT00000010862
Oryzias
sp. (Medaka) : ENSORLT00000013844
Takifugu
sp. (Fugu) : SINFRUT00000147949
Pan
sp. (Chimpanzee) : XM_517555
Canis
sp. (Dog) : XM_843745
HIX0004674
HIT000604569 (
ENST00000504342
)
(Long-chain-fatty-acid--CoA ligase 1; EC=6.2.1.3; Acyl-CoA synthetase 1; ACS1; Long-chain acyl-CoA synthetase 1; LACS 1; Long-chain acyl-CoA synthetase 2; LACS 2; Long-chain fatty acid-CoA ligase 2; Palmitoyl-CoA ligase 1; Palmitoyl-CoA ligase 2;)
genome : 185,678,175 - 185,733,413 (55,239)
query : 1 - 2,333 (2,333/2,333)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.2.1.3
KEGG pathway :
00071 : Fatty acid metabolism (28)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_mito 11, mito_pero 4.83333, pero 4.5,
nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004674)
HIX0004674
HIT000491450
(
AK296826
)
(Long-chain-fatty-acid--CoA ligase 1; EC=6.2.1.3; Acyl-CoA synthetase 1; ACS1; Long-chain acyl-CoA synthetase 1; LACS 1; Long-chain acyl-CoA synthetase 2; LACS 2; Long-chain fatty acid-CoA ligase 2; Palmitoyl-CoA ligase 1; Palmitoyl-CoA ligase 2;)
genome : 185,678,201 - 185,726,942 (48,742)
query : 1 - 2,469 (2,469/2,469)
21 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.986;
1.000;0.993;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.2.1.3
KEGG pathway :
00071 : Fatty acid metabolism (28)
01100 : Metabolic pathways (1346)
InterPro :
IPR000873 : AMP-dependent synthetase/ligase
IPR020845 : AMP-binding, conserved site
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_mito 11.5, mito_pero 4.33333,
pero 3.5, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004674)
HIX0004674
HIT000612897 (
ENST00000513317
)
(Long-chain-fatty-acid--CoA ligase 1; EC=6.2.1.3; Acyl-CoA synthetase 1; ACS1; Long-chain acyl-CoA synthetase 1; LACS 1; Long-chain acyl-CoA synthetase 2; LACS 2; Long-chain fatty acid-CoA ligase 2; Palmitoyl-CoA ligase 1; Palmitoyl-CoA ligase 2;)
genome : 185,678,201 - 185,726,942 (48,742)
query : 1 - 2,469 (2,469/2,469)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.2.1.3
KEGG pathway :
00071 : Fatty acid metabolism (28)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_mito 11.5, mito_pero 4.33333,
pero 3.5, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004674)
HIX0004674
HIT000605067 (
ENST00000504900
)
(Long-chain-fatty-acid--CoA ligase 1; EC=6.2.1.3; Acyl-CoA synthetase 1; ACS1; Long-chain acyl-CoA synthetase 1; LACS 1; Long-chain acyl-CoA synthetase 2; LACS 2; Long-chain fatty acid-CoA ligase 2; Palmitoyl-CoA ligase 1; Palmitoyl-CoA ligase 2;)
genome : 185,689,184 - 185,747,206 (58,023)
query : 1 - 1,583 (1,583/1,583)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.2.1.3
KEGG pathway :
00071 : Fatty acid metabolism (28)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 16.5, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004674)
HIX0004674
HIT000391723
(
DQ083029
)
(Long-chain-fatty-acid--CoA ligase 1; EC=6.2.1.3; Acyl-CoA synthetase 1; ACS1; Long-chain acyl-CoA synthetase 1; LACS 1; Long-chain acyl-CoA synthetase 2; LACS 2; Long-chain fatty acid-CoA ligase 2; Palmitoyl-CoA ligase 1; Palmitoyl-CoA ligase 2;)
genome : 185,689,478 - 185,724,702 (35,225)
query : 1 - 1,154 (1,154/1,154)
11 exons
identity = 0.997
3'(0.984;1.000;1.000;1.000;1.000;1.000;1.000;
0.990;1.000;0.991;1.000)5'
coverage = 1.000
EC number :
EC 6.2.1.3
KEGG pathway :
00071 : Fatty acid metabolism (28)
01100 : Metabolic pathways (1346)
InterPro :
IPR000873 : AMP-dependent synthetase/ligase
IPR020845 : AMP-binding, conserved site
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, cyto_nucl 17, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004674)
HIX0004674
HIT000391722
(
DQ083028
)
(Long-chain-fatty-acid--CoA ligase 1; EC=6.2.1.3; Acyl-CoA synthetase 1; ACS1; Long-chain acyl-CoA synthetase 1; LACS 1; Long-chain acyl-CoA synthetase 2; LACS 2; Long-chain fatty acid-CoA ligase 2; Palmitoyl-CoA ligase 1; Palmitoyl-CoA ligase 2;)
genome : 185,689,482 - 185,695,027 (5,546)
query : 1 - 280 (280/280)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.2.1.3
KEGG pathway :
00071 : Fatty acid metabolism (28)
01100 : Metabolic pathways (1346)
InterPro :
IPR000873 : AMP-dependent synthetase/ligase
IPR020459 : AMP-binding
IPR020845 : AMP-binding, conserved site
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 11, cyto_mito 10.5, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004674)
HIX0004674
HIT000605621 (
ENST00000505492
)
(Long-chain-fatty-acid--CoA ligase 1; EC=6.2.1.3; Acyl-CoA synthetase 1; ACS1; Long-chain acyl-CoA synthetase 1; LACS 1; Long-chain acyl-CoA synthetase 2; LACS 2; Long-chain fatty acid-CoA ligase 2; Palmitoyl-CoA ligase 1; Palmitoyl-CoA ligase 2;)
genome : 185,689,482 - 185,695,027 (5,546)
query : 1 - 280 (280/280)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.2.1.3
KEGG pathway :
00071 : Fatty acid metabolism (28)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 11, cyto_mito 10.5, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004674)
HIX0031629
HIT000252268
(
AY358224
)
Representative transcript
(Proteoglycan 3; Eosinophil major basic protein 2; Precursor;)
genome : 185,719,454 - 185,720,200 (747)
query : 1 - 747 (747/778)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR001304 : C-type lectin
IPR002352 : Eosinophil major basic protein
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
GO :
0006955 : Biological Process : immune response
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10, extr 6.5, cyto_nucl 6.5, extr_plas 6.5,
plas 5.5, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031629)
Ortholog candidate ( ->
Evola
)
Equus
sp. (Horse) : ENSECAT00000004424
Monodelphis
sp. (Opossum) : ENSMODT00000039932
Pan
sp. (Chimpanzee) : XM_001162715
HIX0031629
HIT000486307 (
NR_003542
)
(Proteoglycan 3; Eosinophil major basic protein 2; Precursor;)
genome : 185,719,450 - 185,720,200 (751)
query : 1 - 751 (751/751)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10, extr 6.5, cyto_nucl 6.5, extr_plas 6.5,
plas 5.5, pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031629)
HIX0031629
HIT000606789 (
ENST00000506741
)
(Proteoglycan 3; Eosinophil major basic protein 2; Precursor;)
genome : 185,719,450 - 185,720,200 (751)
query : 1 - 751 (751/751)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10, extr 6.5, cyto_nucl 6.5, extr_plas 6.5,
plas 5.5, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031629)
HIX0031629
HIT000611734 (
ENST00000512051
)
(Proteoglycan 3; Eosinophil major basic protein 2; Precursor;)
genome : 185,719,666 - 185,720,045 (380)
query : 1 - 380 (380/380)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12, extr 6.5, cyto_mito 6.5, extr_plas 6,
cyto_golg 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031629)
HIX0205669
HIT000607979 (
ENST00000508020
)
(Conserved hypothetical protein.)
genome : 185,734,773 - 185,742,443 (7,671)
query : 1 - 617 (617/617)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 12.5, cyto 6.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205669)
HIX0004676
HIT000660026 (
NR_037867
)
(Conserved hypothetical protein.)
genome : 185,764,450 - 185,768,200 (3,751)
query : 1 - 3,390 (3,390/3,390)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 5, cyto 2, mito 2, cyto_mito 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004676)
HIX0004676
HIT000088970
(
BC016366
)
Representative transcript
(Conserved hypothetical protein.)
genome : 185,765,737 - 185,776,806 (11,070)
query : 5 - 637 (633/667)
3 exons
identity = 0.994
3'(0.997;1.000;0.984)5'
coverage = 0.992
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004676)
HIX0004676
HIT000014042
(
AK057428
)
(Conserved hypothetical protein.)
genome : 185,765,735 - 185,768,200 (2,466)
query : 1 - 2,101 (2,101/2,101)
2 exons
identity = 0.993
3'(0.993;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 13.5, nucl 8, extr 3, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004676)
HIX0004676
HIT000611403 (
ENST00000511703
)
(Conserved hypothetical protein.)
genome : 185,765,739 - 185,776,905 (11,167)
query : 1 - 729 (729/729)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004676)
HIX0004676
HIT000610093 (
ENST00000510284
)
(Hypothetical short protein.)
genome : 185,767,432 - 185,776,836 (9,405)
query : 1 - 576 (576/576)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto_nucl 9, cyto 8.5, nucl 4.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004676)
HIX0206144
HIT000659869 (
NR_037510
)
(Non-protein coding transcript.)
genome : 185,772,167 - 185,772,264 (98)
query : 1 - 98 (98/98)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206144)
HIX0206144
HIT000693753 (
ENST00000581853
)
(Non-protein coding transcript.)
genome : 185,772,167 - 185,772,264 (98)
query : 1 - 98 (98/98)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0206144)
HIX0004677
HIT000726038 (
NR_039975
)
(Hypothetical short protein.)
genome : 185,814,154 - 185,820,615 (6,462)
query : 1 - 1,529 (1,529/1,529)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 6.83333, nucl 6.5, cyto 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004677)
HIX0004677
HIT000726039 (
NR_039976
)
(Hypothetical short protein.)
genome : 185,814,154 - 185,820,615 (6,462)
query : 1 - 1,516 (1,516/1,516)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 6.83333, nucl 6.5, cyto 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004677)
HIX0004677
HIT000726040 (
NR_039977
)
(Hypothetical short protein.)
genome : 185,814,154 - 185,820,615 (6,462)
query : 1 - 1,296 (1,296/1,296)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 6.83333, nucl 6.5, cyto 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004677)
HIX0004677
HIT000020989
(
AK096134
)
Representative transcript
(Conserved hypothetical protein.)
genome : 185,814,154 - 185,820,506 (6,353)
query : 1 - 3,049 (3,049/3,049)
3 exons
identity = 1.000
3'(1.000;0.999;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, nucl 4, cyto 4, cyto_nucl 4, pero 4,
cyto_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004677)
HIX0004677
HIT000254659
(
AY429594
)
(Hypothetical short protein.)
genome : 185,814,924 - 185,820,615 (5,692)
query : 1 - 759 (759/759)
3 exons
identity = 0.997
3'(0.997;0.996;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 6.83333, nucl 6.5, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004677)
HIX0004677
HIT000254660
(
AY429595
)
(Hypothetical short protein.)
genome : 185,814,924 - 185,820,615 (5,692)
query : 1 - 526 (526/526)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 6.83333, nucl 6.5, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004677)
HIX0004677
HIT000606543 (
ENST00000506479
)
(Hypothetical short protein.)
genome : 185,815,025 - 185,819,918 (4,894)
query : 1 - 634 (634/634)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, nucl 3.5, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004677)
HIX0004677
HIT000607189 (
ENST00000507183
)
(Hypothetical short protein.)
genome : 185,815,055 - 185,820,608 (5,554)
query : 1 - 621 (621/621)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 6.83333, nucl 6.5, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004677)
HIX0004677
HIT000615269 (
ENST00000515864
)
(Hypothetical short protein.)
genome : 185,815,059 - 185,820,605 (5,547)
query : 1 - 601 (601/601)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto_nucl 10.5, cyto 10, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004677)
HIX0205418
HIT000603650 (
ENST00000503355
)
(Conserved hypothetical protein.)
genome : 185,832,043 - 185,832,506 (464)
query : 1 - 464 (464/464)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 13, nucl 10.5, cyto_nucl 10, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205418)
HIX0215995
HIT000692746 (
ENST00000580836
)
(Non-protein coding transcript.)
genome : 185,859,537 - 185,859,594 (58)
query : 1 - 58 (58/58)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215995)
HIX0215995
HIT000725723 (
NR_039660
)
(Non-protein coding transcript.)
genome : 185,859,537 - 185,859,594 (58)
query : 1 - 58 (58/58)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215995)
HIX0024693
HIT000047956
(
AK128083
)
Representative transcript
(Conserved hypothetical protein.)
genome : 185,905,431 - 185,909,281 (3,851)
query : 1 - 3,861 (3,861/3,861)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto_nucl 7.66667, cyto 7, nucl 6,
cyto_pero 5.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024693)
HIX0205509
HIT000605212 (
ENST00000505053
)
(Hypothetical protein.)
genome : 185,910,151 - 185,926,340 (16,190)
query : 1 - 911 (911/911)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 11, mito 5, cyto 4.5, extr 3,
mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205509)
HIX0031888
HIT000501546
(
BC140795
)
Representative transcript
(Hairy and enhancer of split-related protein HELT.)
genome : 185,939,995 - 185,941,958 (1,964)
query : 1 - 846 (846/846)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR003650 : Orange
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
GO :
0003677 : Molecular Function : DNA binding
0006355 : Biological Process : regulation of transcription, DNA-templated
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031888)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AB120968
Danio
sp. (Zebrafish) : BC092667
Bos
sp. (Cow) : ENSBTAT00000019570
Canis
sp. (Dog) : ENSCAFT00000012153
Monodelphis
sp. (Opossum) : ENSMODT00000005825
Pongo
sp. (Orangutan) : ENSPPYT00000017718
Tetraodon
sp. (Tetraodon) : GSTENT00033507001
Takifugu
sp. (Fugu) : SINFRUT00000161533
Rattus
sp. (Rat) : XM_001060882
Macaca
sp. (Macaque) : XM_001084425
Pan
sp. (Chimpanzee) : XM_001162841
Gallus
sp. (Chicken) : XM_001232414
Equus
sp. (Horse) : XM_001491283
HIX0031888
HIT000502975
(
BC144569
)
(Hairy and enhancer of split-related protein HELT.)
genome : 185,939,995 - 185,941,958 (1,964)
query : 1 - 846 (846/846)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR003650 : Orange
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
GO :
0003677 : Molecular Function : DNA binding
0006355 : Biological Process : regulation of transcription, DNA-templated
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031888)
HIX0031888
HIT000605728 (
ENST00000505610
)
(Hairy and enhancer of split-related protein HELT.)
genome : 185,939,995 - 185,941,958 (1,964)
query : 1 - 846 (846/846)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031888)
HIX0031888
HIT000502974
(
BC144568
)
(Hairy and enhancer of split-related protein HELT.)
genome : 185,939,995 - 185,941,956 (1,962)
query : 1 - 1,099 (1,099/1,099)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR003650 : Orange
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
GO :
0003677 : Molecular Function : DNA binding
0006355 : Biological Process : regulation of transcription, DNA-templated
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031888)
HIX0031888
HIT000613157 (
ENST00000513599
)
(Hairy and enhancer of split-related protein HELT.)
genome : 185,939,995 - 185,941,956 (1,962)
query : 1 - 1,099 (1,099/1,099)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031888)
HIX0031888
HIT000502973
(
BC144567
)
(Hairy and enhancer of split-related protein HELT.)
genome : 185,939,995 - 185,941,950 (1,956)
query : 1 - 841 (841/841)
4 exons
identity = 0.999
5'(0.991;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR003650 : Orange
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
GO :
0003677 : Molecular Function : DNA binding
0006355 : Biological Process : regulation of transcription, DNA-templated
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031888)
HIX0031888
HIT000615186 (
ENST00000515777
)
(Hairy and enhancer of split-related protein HELT.)
genome : 185,939,995 - 185,941,950 (1,956)
query : 1 - 841 (841/841)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031888)
HIX0031888
HIT000131505 (
ENST00000338875
)
(Hairy and enhancer of split-related protein HELT.)
genome : 185,940,083 - 185,941,926 (1,844)
query : 1 - 984 (984/984)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031888)
HIX0031888
HIT000365900 (
NM_001029887
)
(Hairy and enhancer of split-related protein HELT.)
genome : 185,940,083 - 185,941,926 (1,844)
query : 1 - 984 (984/984)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031888)
HIX0031419
HIT000097598
(
BC043280
)
Representative transcript
(Conserved hypothetical protein.)
genome : 185,973,050 - 186,028,402 (55,353)
query : 1 - 2,186 (2,186/2,202)
9 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.994;
0.993;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 7.5, extr_plas 7.5, nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031419)
HIX0031419
HIT000608909 (
ENST00000509017
)
(Conserved hypothetical protein.)
genome : 185,973,050 - 186,028,402 (55,353)
query : 1 - 2,186 (2,186/2,186)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 7.5, extr_plas 7.5, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031419)
HIX0031419
HIT000254933
(
AY494057
)
(Hypothetical short protein.)
genome : 185,973,050 - 185,983,970 (10,921)
query : 1 - 848 (848/848)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 5.5, cyto_nucl 4.5, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031419)
HIX0031419
HIT000606407 (
ENST00000506338
)
(Hypothetical short protein.)
genome : 185,973,050 - 185,983,970 (10,921)
query : 1 - 848 (848/848)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 5.5, cyto_nucl 4.5, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031419)
HIX0031419
HIT000254934
(
AY494058
)
(Conserved hypothetical protein.)
genome : 185,983,611 - 185,993,227 (9,617)
query : 1 - 1,192 (1,192/1,192)
5 exons
identity = 0.999
5'(1.000;1.000;0.992;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 7.5, extr_plas 7.5, nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031419)
HIX0031419
HIT000611444 (
ENST00000511746
)
(Conserved hypothetical protein.)
genome : 185,983,611 - 185,993,227 (9,617)
query : 1 - 1,192 (1,192/1,192)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 7.5, extr_plas 7.5, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031419)
HIX0205716
HIT000608706 (
ENST00000508796
)
(Ribosomal protein L22e family protein.)
genome : 185,986,135 - 185,986,477 (343)
query : 1 - 343 (343/343)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, mito 5, nucl 3, cyto_mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205716)
HIX0022119
HIT000020391
(
AK095536
)
Representative transcript
(Conserved hypothetical protein.)
genome : 186,050,448 - 186,052,994 (2,547)
query : 1 - 2,547 (2,547/2,547)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 7, cyto_nucl 5.5, nucl 2, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022119)
HIX0004678
HIT000112094 (
ENST00000281456
)
(ADP/ATP translocase 1; ADP,ATP carrier protein 1; ADP,ATP carrier protein, heart/skeletal muscle isoform T1; Adenine nucleotide translocator 1; ANT 1; Solute carrier family 25 member 4;)
genome : 186,064,395 - 186,068,434 (4,040)
query : 1 - 1,338 (1,338/1,338)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto 12, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004678)
HIX0004678
HIT000260211
(
BC061589
)
(ADP/ATP translocase 1; ADP,ATP carrier protein 1; ADP,ATP carrier protein, heart/skeletal muscle isoform T1; Adenine nucleotide translocator 1; ANT 1; Solute carrier family 25 member 4;)
genome : 186,064,429 - 186,068,425 (3,997)
query : 18 - 1,313 (1,296/1,327)
4 exons
identity = 0.998
5'(0.986;1.000;1.000;1.000)3'
coverage = 0.987
InterPro :
IPR002067 : Mitochondrial carrier protein
IPR002113 : Adenine nucleotide translocator 1
IPR018108 : Mitochondrial substrate/solute carrier
IPR023395 : Mitochondrial carrier domain
GO :
0005215 : Molecular Function : transporter activity
0005743 : Cellular Component : mitochondrial inner membrane
0006810 : Biological Process : transport
0055085 : Biological Process : transmembrane transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto 12, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004678)
HIX0004678
HIT000198152 (
NM_001151
)
(ADP/ATP translocase 1; ADP,ATP carrier protein 1; ADP,ATP carrier protein, heart/skeletal muscle isoform T1; Adenine nucleotide translocator 1; ANT 1; Solute carrier family 25 member 4;)
genome : 186,064,417 - 186,071,538 (7,122)
query : 1 - 4,420 (4,420/4,420)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto 12, extr 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004678)
HIX0004678
HIT000191110
(
J02966
)
(ADP/ATP translocase 1; ADP,ATP carrier protein 1; ADP,ATP carrier protein, heart/skeletal muscle isoform T1; Adenine nucleotide translocator 1; ANT 1; Solute carrier family 25 member 4;)
genome : 186,064,422 - 186,068,426 (4,005)
query : 1 - 1,296 (1,296/1,320)
4 exons
identity = 0.992
5'(0.981;0.994;0.993;0.996)3'
coverage = 0.999
InterPro :
IPR002067 : Mitochondrial carrier protein
IPR002113 : Adenine nucleotide translocator 1
IPR018108 : Mitochondrial substrate/solute carrier
IPR023395 : Mitochondrial carrier domain
GO :
0005215 : Molecular Function : transporter activity
0005743 : Cellular Component : mitochondrial inner membrane
0006810 : Biological Process : transport
0055085 : Biological Process : transmembrane transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto 10, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004678)
HIX0004678
HIT000424699
(
AK291902
)
(ADP/ATP translocase 1; ADP,ATP carrier protein 1; ADP,ATP carrier protein, heart/skeletal muscle isoform T1; Adenine nucleotide translocator 1; ANT 1; Solute carrier family 25 member 4;)
genome : 186,064,423 - 186,068,159 (3,737)
query : 1 - 1,035 (1,035/1,035)
4 exons
identity = 0.999
5'(1.000;0.998;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002067 : Mitochondrial carrier protein
IPR002113 : Adenine nucleotide translocator 1
IPR018108 : Mitochondrial substrate/solute carrier
IPR023395 : Mitochondrial carrier domain
GO :
0005215 : Molecular Function : transporter activity
0005743 : Cellular Component : mitochondrial inner membrane
0006810 : Biological Process : transport
0055085 : Biological Process : transmembrane transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto 12, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004678)
HIX0004678
HIT000261097
(
BC063643
)
(ADP/ATP translocase 1; ADP,ATP carrier protein 1; ADP,ATP carrier protein, heart/skeletal muscle isoform T1; Adenine nucleotide translocator 1; ANT 1; Solute carrier family 25 member 4;)
genome : 186,064,428 - 186,068,425 (3,998)
query : 1 - 1,296 (1,296/1,310)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002067 : Mitochondrial carrier protein
IPR002113 : Adenine nucleotide translocator 1
IPR018108 : Mitochondrial substrate/solute carrier
IPR023395 : Mitochondrial carrier domain
GO :
0005215 : Molecular Function : transporter activity
0005743 : Cellular Component : mitochondrial inner membrane
0006810 : Biological Process : transport
0055085 : Biological Process : transmembrane transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto 12, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004678)
HIX0004678
HIT000033884
(
BC008664
)
Representative transcript
(ADP/ATP translocase 1; ADP,ATP carrier protein 1; ADP,ATP carrier protein, heart/skeletal muscle isoform T1; Adenine nucleotide translocator 1; ANT 1; Solute carrier family 25 member 4;)
genome : 186,064,429 - 186,068,434 (4,006)
query : 1 - 1,304 (1,304/1,319)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002067 : Mitochondrial carrier protein
IPR002113 : Adenine nucleotide translocator 1
IPR018108 : Mitochondrial substrate/solute carrier
IPR023395 : Mitochondrial carrier domain
GO :
0005215 : Molecular Function : transporter activity
0005743 : Cellular Component : mitochondrial inner membrane
0006810 : Biological Process : transport
0055085 : Biological Process : transmembrane transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto 12, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004678)
Ortholog candidate ( ->
Evola
)
Takifugu
sp. (Fugu) : AB183682
Gallus
sp. (Chicken) : AJ719388
Mus
sp. (Mouse) : AK078077
Danio
sp. (Zebrafish) : BC050956
Bos
sp. (Cow) : BC102994
Rattus
sp. (Rat) : D12770
Equus
sp. (Horse) : ENSECAT00000022345
Monodelphis
sp. (Opossum) : ENSMODT00000005836
Pongo
sp. (Orangutan) : ENSPPYT00000017719
Pan
sp. (Chimpanzee) : XM_517556
Canis
sp. (Dog) : XM_532844
HIX0004678
HIT000329699
(
AB209764
)
(ADP/ATP translocase 1; ADP,ATP carrier protein 1; ADP,ATP carrier protein, heart/skeletal muscle isoform T1; Adenine nucleotide translocator 1; ANT 1; Solute carrier family 25 member 4;)
genome : 186,064,430 - 186,068,424 (3,995)
query : 1 - 3,995 (3,995/3,995)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR002067 : Mitochondrial carrier protein
IPR002113 : Adenine nucleotide translocator 1
IPR018108 : Mitochondrial substrate/solute carrier
IPR023395 : Mitochondrial carrier domain
GO :
0005215 : Molecular Function : transporter activity
0005743 : Cellular Component : mitochondrial inner membrane
0006810 : Biological Process : transport
0055085 : Biological Process : transmembrane transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 9, mito 3.5, E.R._mito 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004678)
HIX0004678
HIT000595252 (
ENST00000491736
)
(ADP/ATP translocase 1; ADP,ATP carrier protein 1; ADP,ATP carrier protein, heart/skeletal muscle isoform T1; Adenine nucleotide translocator 1; ANT 1; Solute carrier family 25 member 4;)
genome : 186,064,432 - 186,068,395 (3,964)
query : 1 - 1,666 (1,666/1,666)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, cyto 12.5, cyto_nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004678)
HIX0004678
HIT000615003 (
ENST00000515584
)
(ADP/ATP translocase 1; ADP,ATP carrier protein 1; ADP,ATP carrier protein, heart/skeletal muscle isoform T1; Adenine nucleotide translocator 1; ANT 1; Solute carrier family 25 member 4;)
genome : 186,064,432 - 186,066,752 (2,321)
query : 1 - 937 (937/937)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, cyto 12.5, cyto_nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004678)
HIX0004678
HIT000191184
(
J03593
)
(Non-protein coding transcript.)
genome : 186,064,448 - 186,064,637 (190)
query : 1 - 190 (190/190)
1 exon
identity = 0.989
5'(0.989)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004678)
HIX0004678
HIT000064314
(
AF052119
)
(Conserved hypothetical protein.)
genome : 186,069,155 - 186,071,536 (2,382)
query : 1 - 2,382 (2,382/2,401)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004678)
HIX0004679
HIT000008152
(
AK024878
)
(Conserved hypothetical protein.)
genome : 186,072,877 - 186,081,581 (8,705)
query : 1 - 2,041 (2,041/2,064)
2 exons
identity = 0.995
3'(0.997;0.994)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 17.5, cyto_mito 10, pero 5, nucl 3, plas 2.5,
extr_plas 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004679)
HIX0004679
HIT000486233 (
NM_020827
)
(UPF0501 protein KIAA1430;)
genome : 186,080,820 - 186,125,182 (44,363)
query : 1 - 4,878 (4,878/4,892)
5 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 16, cyto 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004679)
HIX0004679
HIT000556319 (
ENST00000458385
)
(UPF0501 protein KIAA1430;)
genome : 186,080,819 - 186,125,155 (44,337)
query : 1 - 4,852 (4,852/4,852)
5 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 16, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004679)
HIX0004679
HIT000025082
(
AL133615
)
(UPF0501 protein KIAA1430;)
genome : 186,081,255 - 186,111,465 (30,211)
query : 1 - 3,411 (3,411/3,443)
4 exons
identity = 0.997
3'(0.997;1.000;0.996)5'
coverage = 1.000
InterPro :
IPR029488 : KIAA1430 homologue
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 16.5, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004679)
HIX0004679
HIT000001145
(
AB037851
)
(UPF0501 protein KIAA1430;)
genome : 186,081,256 - 186,112,337 (31,082)
query : 1 - 4,282 (4,282/4,282)
4 exons
identity = 0.998
3'(0.997;1.000;0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004679)
HIX0004679
HIT000049534
(
AK130263
)
(Hypothetical short protein.)
genome : 186,081,256 - 186,083,025 (1,770)
query : 1 - 1,770 (1,770/1,770)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 11, mito 3, golg 2, mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004679)
HIX0004679
HIT000016860
(
AK091993
)
Representative transcript
(UPF0501 protein KIAA1430;)
genome : 186,082,981 - 186,125,113 (42,133)
query : 1 - 2,650 (2,650/2,650)
5 exons
identity = 0.998
3'(0.995;1.000;0.996)5'
coverage = 1.000
InterPro :
IPR029488 : KIAA1430 homologue
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 16, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004679)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK129358
Danio
sp. (Zebrafish) : BC067688
Rattus
sp. (Rat) : BC082052
Bos
sp. (Cow) : BC105339
Pongo
sp. (Orangutan) : CR858041
Canis
sp. (Dog) : ENSCAFT00000012148
Macaca
sp. (Macaque) : XM_001084669
Pan
sp. (Chimpanzee) : XM_001163296
Gallus
sp. (Chicken) : XM_001232314
Monodelphis
sp. (Opossum) : XM_001369000
Equus
sp. (Horse) : XM_001491109
HIX0004679
HIT000041033
(
BC030535
)
(UPF0501 protein KIAA1430;)
genome : 186,090,180 - 186,125,182 (35,003)
query : 1 - 2,894 (2,894/2,918)
4 exons
identity = 0.998
3'(0.999;1.000)5'
coverage = 1.000
InterPro :
IPR029488 : KIAA1430 homologue
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 15.5, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004679)
HIX0004679
HIT000614267 (
ENST00000514798
)
(UPF0501 protein KIAA1430;)
genome : 186,090,180 - 186,125,182 (35,003)
query : 1 - 2,895 (2,895/2,895)
4 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 15.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004679)
HIX0004679
HIT000114611 (
ENST00000296775
)
(UPF0501 protein KIAA1430;)
genome : 186,091,453 - 186,125,182 (33,730)
query : 1 - 1,509 (1,509/1,509)
4 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 15.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004679)
HIX0004679
HIT000603306 (
ENST00000502992
)
(UPF0501 protein KIAA1430;)
genome : 186,096,954 - 186,103,673 (6,720)
query : 1 - 594 (594/594)
2 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 13, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004679)
HIX0216145
HIT000208489 (
NM_021942
)
(Foie gras liver health family 1 domain containing protein.)
genome : 184,580,420 - 184,634,747 (54,328)
query : 1 - 4,554 (4,554/4,564)
30 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, mito 6, pero 5, mito_nucl 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216145)
HIX0216145
HIT000319600 (
NM_199053
)
(Foie gras liver health family 1 domain containing protein.)
genome : 184,580,420 - 184,634,747 (54,328)
query : 1 - 4,435 (4,435/4,445)
30 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.940;
0.939;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 5, mito 5, pero 5, mito_pero 5,
mito_nucl 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216145)
HIX0216145
HIT000129115 (
ENST00000334690
)
(Foie gras liver health family 1 domain containing protein.)
genome : 184,580,420 - 184,634,745 (54,326)
query : 1 - 4,552 (4,552/4,552)
30 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, mito 6, pero 5, mito_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216145)
HIX0216145
HIT000028483
(
AL833571
)
(Trafficking protein particle complex subunit 11 isoform b.)
genome : 184,580,441 - 184,634,745 (54,305)
query : 1 - 4,472 (4,472/4,490)
30 exons
identity = 0.997
5'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.993;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.993;
0.992;1.000;1.000;1.000;0.923;0.928;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR012880 : Domain of unknown function DUF1683, C-terminal
IPR021773 : Foie gras liver health family 1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 11, nucl 6.5, mito 5, pero 5,
mito_pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216145)
HIX0216145
HIT000057146
(
BX648499
)
Representative transcript
(Trafficking protein particle complex subunit 11;)
genome : 184,580,446 - 184,633,931 (53,486)
query : 2 - 3,713 (3,712/3,883)
30 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.995;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.994
InterPro :
IPR012880 : Domain of unknown function DUF1683, C-terminal
IPR021773 : Foie gras liver health family 1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, mito 6, pero 5, mito_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216145)
HIX0216145
HIT000311083 (
ENST00000357207
)
(Foie gras liver health family 1 domain containing protein.)
genome : 184,580,446 - 184,634,744 (54,299)
query : 1 - 4,406 (4,406/4,406)
30 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.940;
0.939;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 5, mito 5, pero 5, mito_pero 5,
mito_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216145)
HIX0216145
HIT000021200
(
AK096345
)
(Conserved hypothetical protein.)
genome : 184,580,446 - 184,634,740 (54,295)
query : 1 - 4,521 (4,521/4,521)
30 exons
identity = 0.999
5'(1.000;0.996;1.000;0.986;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.991;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 6, cyto_nucl 5.5, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216145)
HIX0216145
HIT000054828
(
BX538044
)
(Conserved hypothetical protein.)
genome : 184,580,467 - 184,634,745 (54,279)
query : 2 - 4,506 (4,505/4,527)
30 exons
identity = 0.999
5'(1.000;0.996;1.000;1.000;1.000;1.000;1.000;
1.000;0.985;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.994;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 6, cyto_nucl 5.5, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216145)
HIX0216145
HIT000096204
(
BC040530
)
(Conserved hypothetical protein.)
genome : 184,580,470 - 184,634,745 (54,276)
query : 1 - 4,501 (4,501/4,516)
30 exons
identity = 0.999
5'(1.000;0.996;1.000;1.000;1.000;1.000;0.986;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.992;1.000;1.000;1.000;0.993;
1.000;1.000;1.000;0.994;1.000;1.000;1.000;
1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 6, cyto_nucl 5.5, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216145)
HIX0216145
HIT000391176
(
BC139745
)
(Trafficking protein particle complex subunit 11;)
genome : 184,580,529 - 184,634,176 (53,648)
query : 1 - 2,244 (2,244/2,244)
18 exons
identity = 0.995
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.940;0.939;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216145)
HIX0216145
HIT000605789 (
ENST00000505676
)
(Conserved hypothetical protein.)
genome : 184,580,529 - 184,634,176 (53,648)
query : 1 - 2,244 (2,244/2,244)
18 exons
identity = 0.995
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.940;0.939;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216145)
HIX0216145
HIT000028363
(
AL833451
)
(Conserved hypothetical protein.)
genome : 184,585,009 - 184,634,744 (49,736)
query : 1 - 4,357 (4,357/4,378)
29 exons
identity = 0.999
5'(0.991;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.993;
1.000;1.000;1.000;1.000;0.989;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 6, cyto_nucl 5.5, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216145)
HIX0216145
HIT000609694 (
ENST00000509857
)
(Conserved hypothetical protein.)
genome : 184,585,170 - 184,596,002 (10,833)
query : 1 - 548 (548/548)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, nucl 7, mito 7, mito_nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216145)
HIX0004666
pHIT000008917 ( pHIT000008917 )
(Conserved hypothetical protein.)
genome : 184,719,031 - 184,780,613 (61,583)
query : 1 - 1,389 (1,389/1,389)
7 exons
SOSUI :
MEMBRANE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004666)
CAGE tag :
H08BA55I1908,H10BA92A0411,H28BA08M2302
H28BA30D1608,H28BB05O1304
HIX0183471
pHIT000102972 ( pHIT000102972 )
Representative transcript
(Hypothetical protein.)
genome : 185,378,855 - 185,396,691 (17,837)
query : 1 - 255 (255/255)
2 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0183471)
CAGE tag :
T04R0B119B1F
AC107214.5
184500001-184547662 F +
NCBI
AC108477.5
184547663-184709856 F +
NCBI
AC105311.3
184709857-184792408 F +
NCBI
AC074194.6
184792409-184969681 F +
NCBI
AC107222.6
184969682-185077231 F +
NCBI
AC079080.5
185077232-185236878 F +
NCBI
AC103540.5
185236879-185306922 F +
NCBI
AC099343.3
185306923-185501138 F +
NCBI
AC073932.4
185501139-185549355 F +
NCBI
AC079257.7
185549356-185678759 F +
NCBI
AC084871.4
185678760-185880485 F +
NCBI
AC112243.5
185880486-185919418 F +
NCBI
AC093824.3
185919419-186068680 F +
NCBI
AC112237.1
186068681-186070674 F +
NCBI
AC093592.3
186070675-186100000 F +
NCBI