bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0031461
HIT000095716
(
BC039450
)
Representative transcript
(Hypothetical short protein.)
genome : 145,564,074 - 145,567,174 (3,101)
query : 1 - 1,129 (1,129/1,145)
2 exons
identity = 0.999
3'(1.000;0.997)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto 6, extr 4, cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031461)
HIX0031461
HIT000659893 (
NR_037595
)
(Hypothetical short protein.)
genome : 145,564,068 - 145,567,171 (3,104)
query : 1 - 1,132 (1,132/1,132)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto 6, extr 4, cyto_nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031461)
HIX0031461
HIT000608207 (
ENST00000508269
)
(Conserved hypothetical protein.)
genome : 145,564,074 - 145,567,139 (3,066)
query : 1 - 1,094 (1,094/1,094)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto 6, extr 4, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031461)
HIX0031461
HIT000603377 (
ENST00000503066
)
(Hypothetical short protein.)
genome : 145,564,376 - 145,567,064 (2,689)
query : 1 - 897 (897/897)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, extr 12, cyto_nucl 10.5, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031461)
HIX0031461
HIT000612023 (
ENST00000512359
)
(Conserved hypothetical protein.)
genome : 145,564,524 - 145,582,509 (17,986)
query : 1 - 646 (646/646)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 12.5, extr 4, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031461)
HIX0004535
HIT000208746 (
NM_022475
)
(Folate receptor-like domain containing protein.)
genome : 145,567,148 - 145,659,881 (92,734)
query : 1 - 3,555 (3,555/3,555)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, E.R. 3, golg 3, E.R._golg 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004535)
HIX0004535
HIT000114555 (
ENST00000296575
)
(Folate receptor-like domain containing protein.)
genome : 145,567,173 - 145,666,423 (99,251)
query : 1 - 10,072 (10,072/10,072)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, E.R. 3, golg 3, E.R._golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004535)
HIX0004535
HIT000083169
(
AY009951
)
(Hedgehog-interacting protein; HHIP; HIP; Precursor;)
genome : 145,567,173 - 145,659,881 (92,709)
query : 1 - 3,531 (3,531/3,539)
13 exons
identity = 0.999
5'(1.000;0.995;1.000;1.000;1.000;0.994;1.000;
1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 0.998
InterPro :
IPR000742 : Epidermal growth factor-like domain
IPR011041 : Soluble quinoprotein glucose/sorbosone dehydrogenase
IPR011042 : Six-bladed beta-propeller, TolB-like
IPR012938 : Glucose/Sorbosone dehydrogenase
IPR013032 : EGF-like, conserved site
IPR018143 : Folate receptor-like
GO :
0003824 : Molecular Function : catalytic activity
0005515 : Molecular Function : protein binding
0005975 : Biological Process : carbohydrate metabolic process
0016901 : Molecular Function : oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor
0048038 : Molecular Function : quinone binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 21, E.R. 3, golg 3, E.R._golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004535)
HIX0004535
HIT000252791
(
AY358747
)
Representative transcript
(Hedgehog-interacting protein; HHIP; HIP; Precursor;)
genome : 145,567,302 - 145,659,771 (92,470)
query : 106 - 3,396 (3,291/3,399)
13 exons
identity = 0.999
5'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 0.968
InterPro :
IPR000742 : Epidermal growth factor-like domain
IPR011041 : Soluble quinoprotein glucose/sorbosone dehydrogenase
IPR011042 : Six-bladed beta-propeller, TolB-like
IPR012938 : Glucose/Sorbosone dehydrogenase
IPR013032 : EGF-like, conserved site
IPR018143 : Folate receptor-like
GO :
0003824 : Molecular Function : catalytic activity
0005515 : Molecular Function : protein binding
0005975 : Biological Process : carbohydrate metabolic process
0016901 : Molecular Function : oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor
0048038 : Molecular Function : quinone binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 23, cyto_nucl 3, nucl 2.5, cyto 2.5, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004535)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK031539
Danio
sp. (Zebrafish) : BC128659
Gallus
sp. (Chicken) : CR353271
Bos
sp. (Cow) : ENSBTAT00000021390
Oryzias
sp. (Medaka) : ENSORLT00000009206
Pongo
sp. (Orangutan) : ENSPPYT00000017544
Rattus
sp. (Rat) : ENSRNOT00000024616
Tetraodon
sp. (Tetraodon) : GSTENT00032860001
Takifugu
sp. (Fugu) : SINFRUT00000133748
Macaca
sp. (Macaque) : XM_001093950
Pan
sp. (Chimpanzee) : XM_001146476
Monodelphis
sp. (Opossum) : XM_001367162
Equus
sp. (Horse) : XM_001501985
Canis
sp. (Dog) : XM_532677
HIX0004535
HIT000083162
(
AY009317
)
(Hedgehog-interacting protein; HHIP; HIP; Precursor;)
genome : 145,567,308 - 145,659,770 (92,463)
query : 1 - 3,284 (3,284/3,284)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000742 : Epidermal growth factor-like domain
IPR011041 : Soluble quinoprotein glucose/sorbosone dehydrogenase
IPR011042 : Six-bladed beta-propeller, TolB-like
IPR012938 : Glucose/Sorbosone dehydrogenase
IPR013032 : EGF-like, conserved site
IPR018143 : Folate receptor-like
GO :
0003824 : Molecular Function : catalytic activity
0005515 : Molecular Function : protein binding
0005975 : Biological Process : carbohydrate metabolic process
0016901 : Molecular Function : oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor
0048038 : Molecular Function : quinone binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, E.R. 3, golg 3, E.R._golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004535)
HIX0004535
HIT000050893
(
BC025311
)
(Hedgehog-interacting protein; HHIP; HIP; Precursor;)
genome : 145,567,322 - 145,659,168 (91,847)
query : 1 - 2,668 (2,668/2,735)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000742 : Epidermal growth factor-like domain
IPR011041 : Soluble quinoprotein glucose/sorbosone dehydrogenase
IPR011042 : Six-bladed beta-propeller, TolB-like
IPR012938 : Glucose/Sorbosone dehydrogenase
IPR013032 : EGF-like, conserved site
IPR018143 : Folate receptor-like
GO :
0003824 : Molecular Function : catalytic activity
0005515 : Molecular Function : protein binding
0005975 : Biological Process : carbohydrate metabolic process
0016901 : Molecular Function : oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor
0048038 : Molecular Function : quinone binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, E.R. 3, golg 3, E.R._golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004535)
HIX0004535
HIT000532484 (
ENST00000434550
)
(Folate receptor-like domain containing protein.)
genome : 145,567,324 - 145,581,425 (14,102)
query : 1 - 1,770 (1,770/1,770)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, plas 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004535)
HIX0004535
HIT000088757
(
BC015636
)
(Hedgehog-interacting protein; HHIP; HIP; Precursor;)
genome : 145,567,324 - 145,581,009 (13,686)
query : 1 - 1,354 (1,354/1,371)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR011042 : Six-bladed beta-propeller, TolB-like
IPR018143 : Folate receptor-like
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004535)
HIX0004535
HIT000087245
(
BC009298
)
(Hedgehog-interacting protein; HHIP; HIP; Precursor;)
genome : 145,567,351 - 145,581,009 (13,659)
query : 1 - 1,327 (1,327/1,345)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR011042 : Six-bladed beta-propeller, TolB-like
IPR018143 : Folate receptor-like
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004535)
HIX0004535
HIT000081746
(
AK074711
)
(Hedgehog-interacting protein; HHIP; HIP; Precursor;)
genome : 145,567,532 - 145,581,425 (13,894)
query : 1 - 1,562 (1,562/1,562)
4 exons
identity = 0.998
5'(1.000;0.995;0.994;0.998)3'
coverage = 1.000
InterPro :
IPR011042 : Six-bladed beta-propeller, TolB-like
IPR018143 : Folate receptor-like
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, plas 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004535)
HIX0004535
HIT000424646
(
AK291849
)
(Hedgehog-interacting protein; HHIP; HIP; Precursor;)
genome : 145,567,808 - 145,659,192 (91,385)
query : 1 - 2,206 (2,206/2,206)
13 exons
identity = 0.999
5'(1.000;1.000;1.000;0.995;1.000;0.994;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000742 : Epidermal growth factor-like domain
IPR011041 : Soluble quinoprotein glucose/sorbosone dehydrogenase
IPR011042 : Six-bladed beta-propeller, TolB-like
IPR012938 : Glucose/Sorbosone dehydrogenase
IPR013032 : EGF-like, conserved site
IPR018143 : Folate receptor-like
GO :
0003824 : Molecular Function : catalytic activity
0005515 : Molecular Function : protein binding
0005975 : Biological Process : carbohydrate metabolic process
0016901 : Molecular Function : oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor
0048038 : Molecular Function : quinone binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, E.R. 3, golg 3, E.R._golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004535)
HIX0004535
HIT000605992 (
ENST00000505891
)
(Folate receptor-like domain containing protein.)
genome : 145,568,251 - 145,580,928 (12,678)
query : 1 - 547 (547/547)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 8.5, nucl 6.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004535)
HIX0004535
HIT000023355
(
AK098525
)
(Hedgehog-interacting protein; HHIP; HIP; Precursor;)
genome : 145,569,332 - 145,581,008 (11,677)
query : 1 - 1,298 (1,298/1,298)
5 exons
identity = 0.998
5'(0.997;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR011042 : Six-bladed beta-propeller, TolB-like
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 4.5, cyto_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004535)
HIX0004535
HIT000611038 (
ENST00000511314
)
(Six-bladed beta-propeller, TolB-like domain containing protein.)
genome : 145,569,332 - 145,581,008 (11,677)
query : 1 - 1,298 (1,298/1,298)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 4.5, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004535)
HIX0004535
HIT000614537 (
ENST00000515080
)
(Folate receptor-like domain containing protein.)
genome : 145,571,767 - 145,579,991 (8,225)
query : 1 - 585 (585/585)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, extr 13, cyto_nucl 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004535)
HIX0004535
HIT000609485 (
ENST00000509630
)
(Folate receptor-like domain containing protein.)
genome : 145,573,811 - 145,606,817 (33,007)
query : 1 - 563 (563/563)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 11, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004535)
HIX0004536
HIT000007963
(
AK024689
)
Representative transcript
(Conserved hypothetical protein.)
genome : 145,607,900 - 145,609,768 (1,869)
query : 1 - 1,866 (1,866/1,895)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004536)
HIX0004535
HIT000612414 (
ENST00000512791
)
(Six-bladed beta-propeller, TolB-like domain containing protein.)
genome : 145,629,283 - 145,636,775 (7,493)
query : 1 - 824 (824/824)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 15.5, cyto 8, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004535)
HIX0004535
HIT000007919
(
AK024645
)
(Six-bladed beta-propeller, TolB-like domain containing protein.)
genome : 145,633,134 - 145,659,193 (26,060)
query : 1 - 854 (854/875)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000742 : Epidermal growth factor-like domain
IPR011042 : Six-bladed beta-propeller, TolB-like
IPR013032 : EGF-like, conserved site
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, nucl 9.5, cyto_nucl 9.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004535)
HIX0004535
HIT000603401 (
ENST00000503090
)
(EGF-like domain, extracellular containing protein.)
genome : 145,656,019 - 145,660,045 (4,027)
query : 1 - 327 (327/327)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004535)
HIX0004535
HIT000044269
(
AK124396
)
(Conserved hypothetical protein.)
genome : 145,660,789 - 145,666,422 (5,634)
query : 1 - 4,785 (4,785/4,785)
2 exons
identity = 0.996
5'(0.994;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 10.5, cyto_nucl 10, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004535)
HIX0004535
HIT000090515
(
BC022055
)
(Conserved hypothetical protein.)
genome : 145,665,491 - 145,666,423 (933)
query : 4 - 936 (933/964)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 12.5, extr 10, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004535)
HIX0205841
HIT000610862 (
ENST00000511127
)
(Chaperonin Cpn60/TCP-1 family protein.)
genome : 145,766,777 - 145,768,496 (1,720)
query : 1 - 1,720 (1,720/1,720)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 13.5, nucl 7.5, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205841)
HIX0031455
HIT000095610
(
BC039339
)
Representative transcript
(Hypothetical short protein.)
genome : 145,772,724 - 145,795,939 (23,216)
query : 1 - 2,808 (2,808/2,823)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 5, mito 3, cyto_nucl 3, cyto_golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031455)
HIX0031455
HIT000097886
(
BC044611
)
(Hypothetical short protein.)
genome : 145,772,724 - 145,795,939 (23,216)
query : 1 - 2,808 (2,808/2,823)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 5, mito 3, cyto_nucl 3, cyto_golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031455)
HIX0031455
HIT000612453 (
ENST00000512833
)
(Hypothetical short protein.)
genome : 145,772,724 - 145,795,939 (23,216)
query : 1 - 2,807 (2,807/2,807)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 5, mito 3, cyto_nucl 3, cyto_golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031455)
HIX0205761
HIT000609465 (
ENST00000509609
)
(Conserved hypothetical protein.)
genome : 145,841,865 - 145,842,316 (452)
query : 1 - 452 (452/452)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11.5, extr 10, cyto_mito 8.5, nucl 5.5,
cyto_nucl 5.5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205761)
HIX0004537
HIT000606890 (
ENST00000506851
)
(Anaphase-promoting complex subunit 10 isoform 3.)
genome : 145,888,264 - 146,019,365 (131,102)
query : 1 - 471 (471/471)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 11.5, mito 7, nucl 4.5, extr 4,
mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004537)
HIX0004537
HIT000723818 (
NM_001256708
)
(Anaphase-promoting complex subunit 10; APC10; Cyclosome subunit 10;)
genome : 145,915,727 - 146,019,693 (103,967)
query : 1 - 1,674 (1,674/1,674)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14.5, nucl 4, mito 4, pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004537)
HIX0004537
HIT000205167 (
NM_014885
)
(Anaphase-promoting complex subunit 10; APC10; Cyclosome subunit 10;)
genome : 145,915,727 - 146,019,371 (103,645)
query : 1 - 1,457 (1,457/1,457)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14.5, nucl 4, mito 4, pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004537)
HIX0004537
HIT000723816 (
NM_001256706
)
(Anaphase-promoting complex subunit 10; APC10; Cyclosome subunit 10;)
genome : 145,915,727 - 146,019,371 (103,645)
query : 1 - 1,468 (1,468/1,468)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14.5, nucl 4, mito 4, pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004537)
HIX0004537
HIT000723817 (
NM_001256707
)
(Anaphase-promoting complex subunit 10; APC10; Cyclosome subunit 10;)
genome : 145,915,727 - 146,019,371 (103,645)
query : 1 - 1,541 (1,541/1,541)
6 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;0.948;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14.5, nucl 4, mito 4, pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004537)
HIX0004537
HIT000723819 (
NM_001256709
)
(Anaphase-promoting complex subunit 10; APC10; Cyclosome subunit 10;)
genome : 145,915,727 - 146,019,371 (103,645)
query : 1 - 1,609 (1,609/1,609)
7 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;0.961;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 11.5, mito 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004537)
HIX0004537
HIT000723820 (
NM_001256710
)
(Anaphase-promoting complex subunit 10 isoform 3.)
genome : 145,915,727 - 146,019,371 (103,645)
query : 1 - 1,506 (1,506/1,506)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 12.5, mito 6, nucl 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004537)
HIX0004537
HIT000723821 (
NM_001256711
)
(Anaphase-promoting complex subunit 10 isoform 3.)
genome : 145,915,727 - 146,019,371 (103,645)
query : 1 - 1,579 (1,579/1,579)
7 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;0.948;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 12.5, mito 6, nucl 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004537)
HIX0004537
HIT000723822 (
NM_001256712
)
(Anaphase-promoting complex subunit 10; APC10; Cyclosome subunit 10;)
genome : 145,915,727 - 146,019,371 (103,645)
query : 1 - 1,336 (1,336/1,336)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 13, cyto 13, extr 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004537)
HIX0004537
HIT000726636 (
NR_046345
)
(Anaphase-promoting complex subunit 10 isoform 1.)
genome : 145,915,727 - 146,019,371 (103,645)
query : 1 - 1,220 (1,220/1,220)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 13, extr 7, cyto 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004537)
HIX0004537
HIT000602985 (
ENST00000502651
)
(Anaphase-promoting complex subunit 10 isoform 1.)
genome : 145,916,077 - 146,019,368 (103,292)
query : 1 - 867 (867/867)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 13, extr 7, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004537)
HIX0004537
HIT000607639 (
ENST00000507656
)
(Anaphase-promoting complex subunit 10; APC10; Cyclosome subunit 10;)
genome : 145,916,152 - 146,019,353 (103,202)
query : 1 - 1,025 (1,025/1,025)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14.5, nucl 4, mito 4, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004537)
HIX0004537
HIT000032296
(
BC005217
)
(Anaphase-promoting complex subunit 10; APC10; Cyclosome subunit 10;)
genome : 145,916,316 - 146,019,348 (103,033)
query : 1 - 845 (845/876)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR004939 : Anaphase-promoting complex, subunit 10/DOC domain
IPR008979 : Galactose-binding domain-like
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14.5, nucl 4, mito 4, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004537)
HIX0004537
HIT000058291
(
AB012109
)
Representative transcript
(Anaphase-promoting complex subunit 10; APC10; Cyclosome subunit 10;)
genome : 145,916,314 - 146,019,365 (103,052)
query : 5 - 868 (864/890)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.995
InterPro :
IPR004939 : Anaphase-promoting complex, subunit 10/DOC domain
IPR008979 : Galactose-binding domain-like
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14.5, nucl 4, mito 4, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004537)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB174495
Gallus
sp. (Chicken) : AJ719930
Mus
sp. (Mouse) : AK041373
Bos
sp. (Cow) : BC110224
Monodelphis
sp. (Opossum) : ENSMODT00000000535
Oryzias
sp. (Medaka) : ENSORLT00000003568
Pongo
sp. (Orangutan) : ENSPPYT00000017545
Rattus
sp. (Rat) : XM_001070328
Pan
sp. (Chimpanzee) : XM_001141102
Equus
sp. (Horse) : XM_001501957
Danio
sp. (Zebrafish) : XM_001922993
Canis
sp. (Dog) : XM_532678
HIX0004537
HIT000070917
(
AF132794
)
(Anaphase-promoting complex subunit 10; APC10; Cyclosome subunit 10;)
genome : 145,916,314 - 146,019,311 (102,998)
query : 5 - 825 (821/843)
5 exons
identity = 0.999
3'(1.000;1.000;1.000;0.992;1.000)5'
coverage = 0.995
InterPro :
IPR004939 : Anaphase-promoting complex, subunit 10/DOC domain
IPR008979 : Galactose-binding domain-like
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, cyto 15.5, nucl 9.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004537)
HIX0004537
HIT000024211
(
AL080090
)
(Anaphase-promoting complex subunit 10; APC10; Cyclosome subunit 10;)
genome : 145,916,320 - 146,019,341 (103,022)
query : 5 - 922 (918/941)
6 exons
identity = 0.991
3'(0.993;0.992;1.000;1.000;0.948;1.000)5'
coverage = 0.996
InterPro :
IPR004939 : Anaphase-promoting complex, subunit 10/DOC domain
IPR008979 : Galactose-binding domain-like
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 14.5, nucl 4.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004537)
HIX0004537
HIT000118348 (
ENST00000309439
)
(Anaphase-promoting complex subunit 10; APC10; Cyclosome subunit 10;)
genome : 145,916,310 - 146,019,365 (103,056)
query : 1 - 868 (868/868)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14.5, nucl 4, mito 4, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004537)
HIX0004537
HIT000549233 (
ENST00000451299
)
(Anaphase-promoting complex subunit 10; APC10; Cyclosome subunit 10;)
genome : 145,916,310 - 146,019,341 (103,032)
query : 1 - 928 (928/928)
6 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;0.948;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14.5, nucl 4, mito 4, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004537)
HIX0004537
HIT000610079 (
ENST00000510270
)
(Anaphase-promoting complex subunit 10 isoform 2.)
genome : 145,916,313 - 146,019,341 (103,029)
query : 1 - 963 (963/963)
7 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;1.000;0.948;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 12.5, mito 6, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004537)
HIX0004537
HIT000611183 (
ENST00000511466
)
(Anaphase-promoting complex subunit 10; APC10; Cyclosome subunit 10;)
genome : 145,916,348 - 146,019,343 (102,996)
query : 1 - 687 (687/687)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 13, cyto 13, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004537)
HIX0004537
HIT000613892 (
ENST00000514390
)
(Anaphase-promoting complex subunit 10 isoform 1.)
genome : 145,916,607 - 146,019,693 (103,087)
query : 1 - 794 (794/794)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 14, mito 4, nucl 3.5,
mito_pero 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004537)
HIX0004537
HIT000612655 (
ENST00000513054
)
(Anaphase-promoting complex subunit 10 isoform 2.)
genome : 145,916,608 - 146,019,332 (102,725)
query : 1 - 689 (689/689)
7 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;1.000;0.961;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 13, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004537)
HIX0004537
HIT000602903 (
ENST00000502562
)
(Anaphase-promoting complex subunit 10 isoform 3.)
genome : 145,954,197 - 146,019,348 (65,152)
query : 1 - 743 (743/743)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 14, cyto 10, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004537)
HIX0004537
HIT000612314 (
ENST00000512680
)
(Anaphase-promoting complex subunit 10 isoform 4.)
genome : 145,974,831 - 146,018,903 (44,073)
query : 1 - 505 (505/505)
5 exons
identity = 0.992
3'(1.000;1.000;1.000;1.000;0.941)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 14.5, nucl 8.5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004537)
HIX0004537
HIT000608040 (
ENST00000508087
)
(Anaphase-promoting complex subunit 10 isoform 4.)
genome : 145,985,138 - 146,019,316 (34,179)
query : 1 - 749 (749/749)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 12.5, mito 6, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004537)
HIX0004537
HIT000604902 (
ENST00000504721
)
(Anaphase-promoting complex subunit 10 isoform 3.)
genome : 145,985,724 - 146,018,534 (32,811)
query : 1 - 477 (477/477)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto_nucl 2, nucl 1.5, cyto 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004537)
HIX0004537
HIT000614180 (
ENST00000514704
)
(Anaphase-promoting complex subunit 10 isoform 4.)
genome : 146,002,695 - 146,019,319 (16,625)
query : 1 - 815 (815/815)
3 exons
identity = 0.995
3'(1.000;1.000;0.992)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 17.5, nucl 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004537)
HIX0004537
HIT000607145 (
ENST00000507134
)
(Anaphase-promoting complex subunit 10 isoform 3.)
genome : 146,002,741 - 146,019,335 (16,595)
query : 1 - 853 (853/853)
4 exons
identity = 0.996
3'(1.000;1.000;1.000;0.994)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 11.5, mito 5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004537)
HIX0004537
HIT000603170 (
ENST00000502847
)
(Anaphase-promoting complex subunit 10 isoform 4.)
genome : 146,002,812 - 146,019,287 (16,476)
query : 1 - 608 (608/608)
5 exons
identity = 0.995
3'(1.000;1.000;1.000;0.961;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 12.5, mito 5, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004537)
HIX0004538
HIT000114556 (
ENST00000296577
)
(ATP-binding cassette sub-family E member 1; 2'-5'-oligoadenylate-binding protein; HuHP68; RNase L inhibitor; Ribonuclease 4 inhibitor; RNS4I;)
genome : 146,019,084 - 146,050,331 (31,248)
query : 1 - 3,921 (3,921/3,921)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 16.5, nucl 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004538)
HIX0004538
HIT000199812 (
NM_002940
)
(ATP-binding cassette sub-family E member 1; 2'-5'-oligoadenylate-binding protein; HuHP68; RNase L inhibitor; Ribonuclease 4 inhibitor; RNS4I;)
genome : 146,019,156 - 146,050,676 (31,521)
query : 1 - 4,194 (4,194/4,194)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 16.5, nucl 12
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004538)
HIX0004538
HIT000366825 (
NM_001040876
)
(ATP-binding cassette sub-family E member 1; 2'-5'-oligoadenylate-binding protein; HuHP68; RNase L inhibitor; Ribonuclease 4 inhibitor; RNS4I;)
genome : 146,019,156 - 146,050,676 (31,521)
query : 1 - 4,191 (4,191/4,191)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 16.5, nucl 12
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004538)
HIX0004538
HIT000602925 (
ENST00000502586
)
(ATP-binding cassette sub-family E member 1; 2'-5'-oligoadenylate-binding protein; HuHP68; RNase L inhibitor; Ribonuclease 4 inhibitor; RNS4I;)
genome : 146,019,440 - 146,031,596 (12,157)
query : 1 - 769 (769/786)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.978
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 9, cyto 7, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004538)
HIX0004538
HIT000434064
(
AK315198
)
(ATP-binding cassette sub-family E member 1; 2'-5'-oligoadenylate-binding protein; HuHP68; RNase L inhibitor; Ribonuclease 4 inhibitor; RNS4I;)
genome : 146,019,463 - 146,048,725 (29,263)
query : 1 - 2,146 (2,146/2,146)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001450 : 4Fe-4S binding domain
IPR003439 : ABC transporter-like
IPR003593 : AAA+ ATPase domain
IPR007209 : RNase L inhibitor RLI, possible metal-binding domain
IPR013283 : ABC transporter ABCE
IPR017896 : 4Fe-4S ferredoxin-type, iron-sulphur binding domain
IPR017900 : 4Fe-4S ferredoxin, iron-sulphur binding, conserved site
GO :
0000166 : Molecular Function : nucleotide binding
0005524 : Molecular Function : ATP binding
0016887 : Molecular Function : ATPase activity
0017111 : Molecular Function : nucleoside-triphosphatase activity
0051536 : Molecular Function : iron-sulfur cluster binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18, cyto 17, nucl 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004538)
HIX0004538
HIT000607198 (
ENST00000507193
)
(ATP-binding cassette sub-family E member 1; 2'-5'-oligoadenylate-binding protein; HuHP68; RNase L inhibitor; Ribonuclease 4 inhibitor; RNS4I;)
genome : 146,019,463 - 146,048,725 (29,263)
query : 1 - 2,146 (2,146/2,146)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18, cyto 17, nucl 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004538)
HIX0004538
HIT000603130 (
ENST00000502803
)
(ATP-binding cassette sub-family E member 1; 2'-5'-oligoadenylate-binding protein; HuHP68; RNase L inhibitor; Ribonuclease 4 inhibitor; RNS4I;)
genome : 146,019,463 - 146,044,457 (24,995)
query : 1 - 782 (782/782)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, cyto 11, extr 9, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004538)
HIX0004538
HIT000606569 (
ENST00000506506
)
(ATP-binding cassette sub-family E member 1; 2'-5'-oligoadenylate-binding protein; HuHP68; RNase L inhibitor; Ribonuclease 4 inhibitor; RNS4I;)
genome : 146,019,466 - 146,044,690 (25,225)
query : 1 - 421 (421/421)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 14.5, nucl 8, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004538)
HIX0004538
HIT000323582
(
X76388
)
(ATP-binding cassette sub-family E member 1; 2'-5'-oligoadenylate-binding protein; HuHP68; RNase L inhibitor; Ribonuclease 4 inhibitor; RNS4I;)
genome : 146,019,481 - 146,050,331 (30,851)
query : 3 - 3,525 (3,523/3,568)
18 exons
identity = 0.995
5'(0.934;1.000;1.000;1.000;0.992;0.986;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.972;1.000;1.000;0.998)3'
coverage = 0.999
InterPro :
IPR001450 : 4Fe-4S binding domain
IPR003439 : ABC transporter-like
IPR003593 : AAA+ ATPase domain
IPR007209 : RNase L inhibitor RLI, possible metal-binding domain
IPR013283 : ABC transporter ABCE
IPR017896 : 4Fe-4S ferredoxin-type, iron-sulphur binding domain
IPR017900 : 4Fe-4S ferredoxin, iron-sulphur binding, conserved site
GO :
0000166 : Molecular Function : nucleotide binding
0005524 : Molecular Function : ATP binding
0016887 : Molecular Function : ATPase activity
0017111 : Molecular Function : nucleoside-triphosphatase activity
0051536 : Molecular Function : iron-sulfur cluster binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 16.5, nucl 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004538)
HIX0004538
HIT000059885
(
AB062293
)
(ATP-binding cassette sub-family E member 1; 2'-5'-oligoadenylate-binding protein; HuHP68; RNase L inhibitor; Ribonuclease 4 inhibitor; RNS4I;)
genome : 146,019,482 - 146,049,667 (30,186)
query : 1 - 2,859 (2,859/2,978)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.999)3'
coverage = 0.970
InterPro :
IPR001450 : 4Fe-4S binding domain
IPR003439 : ABC transporter-like
IPR003593 : AAA+ ATPase domain
IPR007209 : RNase L inhibitor RLI, possible metal-binding domain
IPR013283 : ABC transporter ABCE
IPR017871 : ABC transporter, conserved site
IPR017896 : 4Fe-4S ferredoxin-type, iron-sulphur binding domain
IPR017900 : 4Fe-4S ferredoxin, iron-sulphur binding, conserved site
GO :
0000166 : Molecular Function : nucleotide binding
0005524 : Molecular Function : ATP binding
0016887 : Molecular Function : ATPase activity
0017111 : Molecular Function : nucleoside-triphosphatase activity
0051536 : Molecular Function : iron-sulfur cluster binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 16.5, nucl 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004538)
HIX0004538
HIT000037511
(
BC016283
)
Representative transcript
(ATP-binding cassette sub-family E member 1; 2'-5'-oligoadenylate-binding protein; HuHP68; RNase L inhibitor; Ribonuclease 4 inhibitor; RNS4I;)
genome : 146,019,494 - 146,050,312 (30,819)
query : 1 - 3,492 (3,492/3,508)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001450 : 4Fe-4S binding domain
IPR003439 : ABC transporter-like
IPR003593 : AAA+ ATPase domain
IPR007209 : RNase L inhibitor RLI, possible metal-binding domain
IPR013283 : ABC transporter ABCE
IPR017871 : ABC transporter, conserved site
IPR017896 : 4Fe-4S ferredoxin-type, iron-sulphur binding domain
IPR017900 : 4Fe-4S ferredoxin, iron-sulphur binding, conserved site
GO :
0000166 : Molecular Function : nucleotide binding
0005524 : Molecular Function : ATP binding
0016887 : Molecular Function : ATPase activity
0017111 : Molecular Function : nucleoside-triphosphatase activity
0051536 : Molecular Function : iron-sulfur cluster binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 16.5, nucl 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004538)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB168951
Gallus
sp. (Chicken) : AJ720308
Mus
sp. (Mouse) : AK049299
Danio
sp. (Zebrafish) : AY391404
Rattus
sp. (Rat) : AY724536
Bos
sp. (Cow) : BC134545
Tetraodon
sp. (Tetraodon) : CR696180
Pongo
sp. (Orangutan) : CR860497
Oryzias
sp. (Medaka) : ENSORLT00000003593
Pan
sp. (Chimpanzee) : ENSPTRT00000030635
Takifugu
sp. (Fugu) : SINFRUT00000161291
Monodelphis
sp. (Opossum) : XM_001367069
Equus
sp. (Horse) : XM_001501949
Canis
sp. (Dog) : XM_532679
HIX0004538
HIT000266341
(
BT009779
)
(ATP-binding cassette sub-family E member 1; 2'-5'-oligoadenylate-binding protein; HuHP68; RNase L inhibitor; Ribonuclease 4 inhibitor; RNS4I;)
genome : 146,025,565 - 146,048,725 (23,161)
query : 1 - 1,800 (1,800/1,800)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001450 : 4Fe-4S binding domain
IPR003439 : ABC transporter-like
IPR003593 : AAA+ ATPase domain
IPR007209 : RNase L inhibitor RLI, possible metal-binding domain
IPR013283 : ABC transporter ABCE
IPR017871 : ABC transporter, conserved site
IPR017896 : 4Fe-4S ferredoxin-type, iron-sulphur binding domain
IPR017900 : 4Fe-4S ferredoxin, iron-sulphur binding, conserved site
GO :
0000166 : Molecular Function : nucleotide binding
0005524 : Molecular Function : ATP binding
0016887 : Molecular Function : ATPase activity
0017111 : Molecular Function : nucleoside-triphosphatase activity
0051536 : Molecular Function : iron-sulfur cluster binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 16.5, nucl 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004538)
HIX0004538
HIT000604522 (
ENST00000504292
)
(ATP-binding cassette sub-family E member 1; 2'-5'-oligoadenylate-binding protein; HuHP68; RNase L inhibitor; Ribonuclease 4 inhibitor; RNS4I;)
genome : 146,029,179 - 146,038,567 (9,389)
query : 1 - 625 (625/625)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_mito 11.3333, mito 7,
E.R._mito 4.83333, plas 4, nucl 2, cysk_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004538)
HIX0004538
HIT000323504
(
X74987
)
(ATP-binding cassette sub-family E member 1; 2'-5'-oligoadenylate-binding protein; HuHP68; RNase L inhibitor; Ribonuclease 4 inhibitor; RNS4I;)
genome : 146,031,574 - 146,050,331 (18,758)
query : 1 - 2,818 (2,818/2,861)
12 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.972;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR003439 : ABC transporter-like
IPR003593 : AAA+ ATPase domain
GO :
0000166 : Molecular Function : nucleotide binding
0005524 : Molecular Function : ATP binding
0016887 : Molecular Function : ATPase activity
0017111 : Molecular Function : nucleoside-triphosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 15, nucl 7.5, cysk 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004538)
HIX0004538
HIT000089140
(
BC016988
)
(ATP-binding cassette sub-family E member 1; 2'-5'-oligoadenylate-binding protein; HuHP68; RNase L inhibitor; Ribonuclease 4 inhibitor; RNS4I;)
genome : 146,033,442 - 146,050,312 (16,871)
query : 1 - 2,626 (2,626/2,640)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR003439 : ABC transporter-like
IPR003593 : AAA+ ATPase domain
IPR017871 : ABC transporter, conserved site
GO :
0000166 : Molecular Function : nucleotide binding
0005524 : Molecular Function : ATP binding
0016887 : Molecular Function : ATPase activity
0017111 : Molecular Function : nucleoside-triphosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 8, mito 8, cyto 7, cyto_nucl 5, E.R._mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004538)
HIX0004538
HIT000529426_02 (
ENST00000431492
)
(ATP-binding cassette sub-family E member 1; 2'-5'-oligoadenylate-binding protein; HuHP68; RNase L inhibitor; Ribonuclease 4 inhibitor; RNS4I;)
genome : 146,041,181 - 146,048,723 (7,543)
query : 3 - 780 (778/780)
8 exons
identity = 0.983
5'(0.984;0.967;0.983;0.991;0.979;0.984;0.991;
0.978)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 7, extr 5, mito 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004538)
HIX0004538
HIT000615092 (
ENST00000515678
)
(ATP-binding cassette sub-family E member 1; 2'-5'-oligoadenylate-binding protein; HuHP68; RNase L inhibitor; Ribonuclease 4 inhibitor; RNS4I;)
genome : 146,042,162 - 146,044,842 (2,681)
query : 1 - 750 (750/750)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 12, mito 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004538)
HIX0004538
HIT000609449 (
ENST00000509593
)
(ATP-binding cassette sub-family E member 1; 2'-5'-oligoadenylate-binding protein; HuHP68; RNase L inhibitor; Ribonuclease 4 inhibitor; RNS4I;)
genome : 146,042,186 - 146,044,479 (2,294)
query : 1 - 582 (582/582)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 14, nucl 4.5, mito 4, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004538)
HIX0004538
HIT000043466
(
AK123593
)
(ATP-binding cassette sub-family E member 1; 2'-5'-oligoadenylate-binding protein; HuHP68; RNase L inhibitor; Ribonuclease 4 inhibitor; RNS4I;)
genome : 146,042,472 - 146,045,083 (2,612)
query : 1 - 2,530 (2,530/2,530)
2 exons
identity = 1.000
5'(1.000;0.999)3'
coverage = 1.000
InterPro :
IPR003439 : ABC transporter-like
GO :
0005524 : Molecular Function : ATP binding
0016887 : Molecular Function : ATPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, mito 13, cyto_nucl 9, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004538)
HIX0004538
HIT000610126 (
ENST00000510321
)
(ATP-binding cassette sub-family E member 1; 2'-5'-oligoadenylate-binding protein; HuHP68; RNase L inhibitor; Ribonuclease 4 inhibitor; RNS4I;)
genome : 146,042,472 - 146,045,083 (2,612)
query : 1 - 2,529 (2,529/2,529)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, mito 13, cyto_nucl 9, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004538)
HIX0004538
HIT000604871 (
ENST00000504683
)
(ATP-binding cassette sub-family E member 1; 2'-5'-oligoadenylate-binding protein; HuHP68; RNase L inhibitor; Ribonuclease 4 inhibitor; RNS4I;)
genome : 146,044,021 - 146,048,795 (4,775)
query : 1 - 759 (759/759)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 12, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004538)
HIX0004539
HIT000552431_01 (
ENST00000454497
)
(Ovarian tumour, otubain domain containing protein.)
genome : 146,054,801 - 146,100,832 (46,032)
query : 1 - 7,069 (7,069/7,069)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 16.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004539)
HIX0004539
HIT000000763
(
AB028969
)
(Conserved hypothetical protein.)
genome : 146,054,803 - 146,060,364 (5,562)
query : 1 - 5,577 (5,577/5,577)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 5.5, cyto_pero 3.5, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004539)
HIX0004539
HIT000259667
(
BC057242
)
(Conserved hypothetical protein.)
genome : 146,058,080 - 146,062,793 (4,714)
query : 12 - 2,038 (2,027/2,065)
3 exons
identity = 1.000
3'(0.999;1.000;1.000)5'
coverage = 0.993
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 12.5, cyto 7, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004539)
HIX0004539
HIT000025748
(
AL137460
)
(Conserved hypothetical protein.)
genome : 146,058,493 - 146,059,484 (992)
query : 1 - 992 (992/1,015)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto 13, cyto_nucl 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004539)
HIX0004539
HIT000104801_02 (
ENST00000237841
)
(Hypothetical protein.)
genome : 146,058,574 - 146,095,898 (37,325)
query : 1 - 3,067 (3,067/3,067)
20 exons
identity = 0.974
3'(0.975;1.000;0.969;0.993;0.988;0.911;0.980;
0.938;0.979;0.990;0.947;1.000;0.983;0.951;
0.985;0.988;0.932;0.979;0.922;0.988)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 16, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004539)
HIX0004539
HIT000090207
(
BC020682
)
(Conserved hypothetical protein.)
genome : 146,058,970 - 146,062,610 (3,641)
query : 1 - 954 (954/983)
3 exons
identity = 0.999
3'(0.999;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004539)
HIX0004539
HIT000013211
(
AK056597
)
Representative transcript
(Conserved hypothetical protein.)
genome : 146,058,963 - 146,076,585 (17,623)
query : 1 - 2,114 (2,114/2,114)
12 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 17.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004539)
HIX0004539
HIT000609378 (
ENST00000509517
)
(Conserved hypothetical protein.)
genome : 146,067,246 - 146,072,047 (4,802)
query : 1 - 617 (617/617)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 13, extr 6, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004539)
HIX0004539
HIT000614435_01 (
ENST00000514973
)
(Ovarian tumour, otubain domain containing protein.)
genome : 146,067,526 - 146,100,832 (33,307)
query : 1 - 1,255 (1,255/1,255)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 17, nucl 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004539)
HIX0004539
HIT000606070_01 (
ENST00000505976
)
(Ovarian tumour, otubain domain containing protein.)
genome : 146,076,965 - 146,101,080 (24,116)
query : 1 - 671 (671/671)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto 7.5, cyto_nucl 5.5, nucl 2.5, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004539)
HIX0004539
HIT000206429 (
NM_017493
)
(Ovarian tumour, otubain domain containing protein.)
genome : 146,080,289 - 146,095,896 (15,608)
query : 1 - 836 (836/846)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 16.5, nucl 7, extr 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004539)
HIX0004539
HIT000114558 (
ENST00000296579
)
(Ovarian tumour, otubain domain containing protein.)
genome : 146,080,289 - 146,100,832 (20,544)
query : 1 - 938 (938/938)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 16.5, nucl 7, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004539)
HIX0004539
HIT000609475 (
ENST00000509620
)
(Ovarian tumour, otubain domain containing protein.)
genome : 146,080,289 - 146,099,307 (19,019)
query : 1 - 864 (864/864)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 16.5, nucl 7, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004539)
HIX0004539
HIT000609813 (
ENST00000509985
)
(Ovarian tumour, otubain domain containing protein.)
genome : 146,080,672 - 146,100,785 (20,114)
query : 1 - 467 (467/467)
6 exons
identity = 0.994
3'(1.000;1.000;1.000;0.947;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 12.5, nucl 7.5, extr 6, mito 3,
golg 3, extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004539)
HIX0004539
HIT000604712 (
ENST00000504501
)
(Ovarian tumour, otubain domain containing protein.)
genome : 146,080,672 - 146,100,763 (20,092)
query : 1 - 543 (543/543)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, cyto 16.5, nucl 10.5, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004539)
HIX0004539
HIT000604558 (
ENST00000504331
)
(Conserved hypothetical protein.)
genome : 146,091,921 - 146,092,863 (943)
query : 1 - 591 (591/591)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, nucl 12.5, cyto 11.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004539)
HIX0205240
eHIT000018008 ( ESTsASS_4_927 )
Representative transcript
(Non-protein coding transcript.)
genome : 146,101,334 - 146,153,498 (52,165)
query : 1 - 531 (531/531)
4 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205240)
ESTs used for assembly :
AI286100,AA952934,AA918305 Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : XM_530753
HIX0205337
HIT000591587 (
ENST00000487908
)
(Conserved hypothetical protein.)
genome : 146,190,962 - 146,191,710 (749)
query : 1 - 423 (423/423)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 23, nucl 4, plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205337)
HIX0031771
HIT000202682_02 (
NM_006054
)
(Reticulon family protein.)
genome : 146,296,532 - 146,299,129 (2,598)
query : 21 - 2,587 (2,567/2,588)
1 exon
identity = 0.950
5'(0.950)3'
coverage = 0.992
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031771)
HIX0031771
HIT000637026_01 (
ENST00000537981
)
(Reticulon family protein.)
genome : 146,296,558 - 146,299,124 (2,567)
query : 1 - 2,532 (2,532/2,532)
1 exon
identity = 0.952
5'(0.952)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031771)
HIX0031771
HIT000635056_01 (
ENST00000536011
)
(Reticulon family protein.)
genome : 146,296,558 - 146,297,748 (1,191)
query : 1 - 990 (990/992)
3 exons
identity = 0.956
5'(0.959;0.982;0.946)3'
coverage = 0.998
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031771)
HIX0031771
HIT000308780_02 (
ENST00000354497
)
(Reticulon family protein.)
genome : 146,296,631 - 146,298,303 (1,673)
query : 1 - 1,407 (1,407/1,407)
2 exons
identity = 0.961
5'(0.959;0.961)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031771)
HIX0031771
HIT000635340_01 (
ENST00000536295
)
(Reticulon family protein.)
genome : 146,296,695 - 146,297,405 (711)
query : 1 - 711 (711/711)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031771)
HIX0031771
pHIT000008756 ( pHIT000008756 )
Representative transcript
(Conserved hypothetical protein.)
genome : 146,296,695 - 146,297,405 (711)
query : 1 - 711 (711/711)
1 exon
InterPro :
IPR003388 : Reticulon
SOSUI :
MEMBRANE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031771)
CAGE tag :
H08BA16N1902
HIX0205539
HIT000605716 (
ENST00000505598
)
(Cytidyltransferase-like domain containing protein.)
genome : 146,377,157 - 146,377,996 (840)
query : 1 - 840 (840/840)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 7.5, mito 7, cyto 6, extr_plas 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205539)
HIX0004540
HIT000051464
(
BC035666
)
Representative transcript
(Hypothetical protein.)
genome : 146,402,013 - 146,403,853 (1,841)
query : 1 - 1,841 (1,841/1,867)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, mito 10, cyto_nucl 9.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004540)
HIX0004540
HIT000006598
(
AK023324
)
(Hypothetical protein.)
genome : 146,402,089 - 146,403,855 (1,767)
query : 1 - 1,767 (1,767/1,767)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004540)
HIX0004541
HIT000614248 (
ENST00000514778
)
(Mothers against decapentaplegic homolog 1; MAD homolog 1; Mothers against DPP homolog 1; JV4-1; Mad-related protein 1; SMAD family member 1; SMAD 1; Smad1; hSMAD1; Transforming growth factor-beta-signaling protein 1; BSP-1;)
genome : 146,402,346 - 146,436,084 (33,739)
query : 1 - 616 (616/616)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 10, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004541)
HIX0004541
HIT000607579 (
ENST00000507594
)
(Mothers against decapentaplegic homolog 1; MAD homolog 1; Mothers against DPP homolog 1; JV4-1; Mad-related protein 1; SMAD family member 1; SMAD 1; Smad1; hSMAD1; Transforming growth factor-beta-signaling protein 1; BSP-1;)
genome : 146,402,458 - 146,436,052 (33,595)
query : 1 - 558 (558/558)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 9, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004541)
HIX0004541
HIT000614299 (
ENST00000514831
)
(Mothers against decapentaplegic homolog 1; MAD homolog 1; Mothers against DPP homolog 1; JV4-1; Mad-related protein 1; SMAD family member 1; SMAD 1; Smad1; hSMAD1; Transforming growth factor-beta-signaling protein 1; BSP-1;)
genome : 146,402,850 - 146,436,103 (33,254)
query : 1 - 569 (569/569)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 6, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004541)
HIX0004541
HIT000220586
(
U59423
)
Representative transcript
(Mothers against decapentaplegic homolog 1; MAD homolog 1; Mothers against DPP homolog 1; JV4-1; Mad-related protein 1; SMAD family member 1; SMAD 1; Smad1; hSMAD1; Transforming growth factor-beta-signaling protein 1; BSP-1;)
genome : 146,402,944 - 146,479,232 (76,289)
query : 10 - 1,975 (1,966/1,990)
7 exons
identity = 0.998
5'(0.992;1.000;1.000;1.000;1.000;1.000;0.997)3'
coverage = 0.995
InterPro :
IPR001132 : SMAD domain, Dwarfin-type
IPR003619 : MAD homology 1, Dwarfin-type
IPR008984 : SMAD/FHA domain
IPR013019 : MAD homology, MH1
IPR013790 : Dwarfin
IPR017855 : SMAD domain-like
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0005667 : Cellular Component : transcription factor complex
0006355 : Biological Process : regulation of transcription, DNA-templated
0007179 : Biological Process : transforming growth factor beta receptor signaling pathway
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 15.8333, cyto 4,
cyto_pero 3.66667, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004541)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB174721
Mus
sp. (Mouse) : AK158509
Pan
sp. (Chimpanzee) : AY369826
Gallus
sp. (Chicken) : AY953143
Rattus
sp. (Rat) : BC061757
Danio
sp. (Zebrafish) : BC086962
Bos
sp. (Cow) : DQ922947
Monodelphis
sp. (Opossum) : ENSMODT00000000610
Oryzias
sp. (Medaka) : ENSORLT00000009248
Oryzias
sp. (Medaka) : ENSORLT00000011780
Tetraodon
sp. (Tetraodon) : GSTENT00032865001
Takifugu
sp. (Fugu) : SINFRUT00000133755
Canis
sp. (Dog) : XM_862253
HIX0004541
HIT000116044 (
ENST00000302085
)
(Mothers against decapentaplegic homolog 1; MAD homolog 1; Mothers against DPP homolog 1; JV4-1; Mad-related protein 1; SMAD family member 1; SMAD 1; Smad1; hSMAD1; Transforming growth factor-beta-signaling protein 1; BSP-1;)
genome : 146,402,944 - 146,479,231 (76,288)
query : 1 - 1,966 (1,966/1,966)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 15.8333, cyto 4,
cyto_pero 3.66667, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004541)
HIX0004541
HIT000202550 (
NM_005900
)
(Mothers against decapentaplegic homolog 1; MAD homolog 1; Mothers against DPP homolog 1; JV4-1; Mad-related protein 1; SMAD family member 1; SMAD 1; Smad1; hSMAD1; Transforming growth factor-beta-signaling protein 1; BSP-1;)
genome : 146,402,951 - 146,480,328 (77,378)
query : 1 - 3,056 (3,056/3,056)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 15.8333, cyto 4,
cyto_pero 3.66667, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004541)
HIX0004541
HIT000611704 (
ENST00000512019
)
(Mothers against decapentaplegic homolog 1; MAD homolog 1; Mothers against DPP homolog 1; JV4-1; Mad-related protein 1; SMAD family member 1; SMAD 1; Smad1; hSMAD1; Transforming growth factor-beta-signaling protein 1; BSP-1;)
genome : 146,403,023 - 146,436,165 (33,143)
query : 1 - 847 (847/847)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 9, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004541)
HIX0004541
HIT000030715
(
BC001878
)
(Mothers against decapentaplegic homolog 1; MAD homolog 1; Mothers against DPP homolog 1; JV4-1; Mad-related protein 1; SMAD family member 1; SMAD 1; Smad1; hSMAD1; Transforming growth factor-beta-signaling protein 1; BSP-1;)
genome : 146,403,026 - 146,479,232 (76,207)
query : 1 - 1,885 (1,885/1,902)
7 exons
identity = 0.999
5'(0.994;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001132 : SMAD domain, Dwarfin-type
IPR003619 : MAD homology 1, Dwarfin-type
IPR008984 : SMAD/FHA domain
IPR013019 : MAD homology, MH1
IPR013790 : Dwarfin
IPR017855 : SMAD domain-like
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0005667 : Cellular Component : transcription factor complex
0006355 : Biological Process : regulation of transcription, DNA-templated
0007179 : Biological Process : transforming growth factor beta receptor signaling pathway
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 15.8333, cyto 4,
cyto_pero 3.66667, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004541)
HIX0004541
HIT000603621 (
ENST00000503324
)
(Mothers against decapentaplegic homolog 1; MAD homolog 1; Mothers against DPP homolog 1; JV4-1; Mad-related protein 1; SMAD family member 1; SMAD 1; Smad1; hSMAD1; Transforming growth factor-beta-signaling protein 1; BSP-1;)
genome : 146,403,638 - 146,435,940 (32,303)
query : 1 - 573 (573/573)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, mito 6, cyto 5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004541)
HIX0004541
HIT000614950 (
ENST00000515527
)
(Mothers against decapentaplegic homolog 1; MAD homolog 1; Mothers against DPP homolog 1; JV4-1; Mad-related protein 1; SMAD family member 1; SMAD 1; Smad1; hSMAD1; Transforming growth factor-beta-signaling protein 1; BSP-1;)
genome : 146,403,650 - 146,435,898 (32,249)
query : 1 - 632 (632/632)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004541)
HIX0004541
HIT000607364 (
ENST00000507367
)
(Conserved hypothetical protein.)
genome : 146,403,944 - 146,435,795 (31,852)
query : 1 - 421 (421/421)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004541)
HIX0004541
HIT000220607
(
U59912
)
(Mothers against decapentaplegic homolog 1; MAD homolog 1; Mothers against DPP homolog 1; JV4-1; Mad-related protein 1; SMAD family member 1; SMAD 1; Smad1; hSMAD1; Transforming growth factor-beta-signaling protein 1; BSP-1;)
genome : 146,403,956 - 146,479,240 (75,285)
query : 1 - 1,793 (1,793/1,793)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001132 : SMAD domain, Dwarfin-type
IPR003619 : MAD homology 1, Dwarfin-type
IPR008984 : SMAD/FHA domain
IPR013019 : MAD homology, MH1
IPR013790 : Dwarfin
IPR017855 : SMAD domain-like
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0005667 : Cellular Component : transcription factor complex
0006355 : Biological Process : regulation of transcription, DNA-templated
0007179 : Biological Process : transforming growth factor beta receptor signaling pathway
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 15.8333, cyto 4,
cyto_pero 3.66667, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004541)
HIX0004541
HIT000315725 (
NM_001003688
)
(Mothers against decapentaplegic homolog 1; MAD homolog 1; Mothers against DPP homolog 1; JV4-1; Mad-related protein 1; SMAD family member 1; SMAD 1; Smad1; hSMAD1; Transforming growth factor-beta-signaling protein 1; BSP-1;)
genome : 146,403,957 - 146,480,328 (76,372)
query : 1 - 2,880 (2,880/2,880)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 15.8333, cyto 4,
cyto_pero 3.66667, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004541)
HIX0004541
HIT000220327
(
U54826
)
(Mothers against decapentaplegic homolog 1; MAD homolog 1; Mothers against DPP homolog 1; JV4-1; Mad-related protein 1; SMAD family member 1; SMAD 1; Smad1; hSMAD1; Transforming growth factor-beta-signaling protein 1; BSP-1;)
genome : 146,403,957 - 146,479,106 (75,150)
query : 1 - 1,658 (1,658/1,658)
7 exons
identity = 0.999
5'(1.000;0.998;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001132 : SMAD domain, Dwarfin-type
IPR003619 : MAD homology 1, Dwarfin-type
IPR008984 : SMAD/FHA domain
IPR013019 : MAD homology, MH1
IPR013790 : Dwarfin
IPR017855 : SMAD domain-like
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0005667 : Cellular Component : transcription factor complex
0006355 : Biological Process : regulation of transcription, DNA-templated
0007179 : Biological Process : transforming growth factor beta receptor signaling pathway
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 15.8333, cyto 4,
cyto_pero 3.66667, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004541)
HIX0004541
HIT000477512 (
ENST00000394092
)
(Mothers against decapentaplegic homolog 1; MAD homolog 1; Mothers against DPP homolog 1; JV4-1; Mad-related protein 1; SMAD family member 1; SMAD 1; Smad1; hSMAD1; Transforming growth factor-beta-signaling protein 1; BSP-1;)
genome : 146,403,957 - 146,479,106 (75,150)
query : 1 - 1,658 (1,658/1,658)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 15.8333, cyto 4,
cyto_pero 3.66667, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004541)
HIX0004541
HIT000425852
(
AK293055
)
(Mothers against decapentaplegic homolog 1; MAD homolog 1; Mothers against DPP homolog 1; JV4-1; Mad-related protein 1; SMAD family member 1; SMAD 1; Smad1; hSMAD1; Transforming growth factor-beta-signaling protein 1; BSP-1;)
genome : 146,403,963 - 146,479,231 (75,269)
query : 1 - 2,085 (2,085/2,085)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR001132 : SMAD domain, Dwarfin-type
IPR003619 : MAD homology 1, Dwarfin-type
IPR008984 : SMAD/FHA domain
IPR013019 : MAD homology, MH1
IPR013790 : Dwarfin
IPR017855 : SMAD domain-like
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0005667 : Cellular Component : transcription factor complex
0006355 : Biological Process : regulation of transcription, DNA-templated
0007179 : Biological Process : transforming growth factor beta receptor signaling pathway
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 15.8333, cyto 4,
cyto_pero 3.66667, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004541)
HIX0004541
HIT000614821 (
ENST00000515385
)
(Mothers against decapentaplegic homolog 1; MAD homolog 1; Mothers against DPP homolog 1; JV4-1; Mad-related protein 1; SMAD family member 1; SMAD 1; Smad1; hSMAD1; Transforming growth factor-beta-signaling protein 1; BSP-1;)
genome : 146,403,963 - 146,479,231 (75,269)
query : 1 - 2,085 (2,085/2,085)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 15.8333, cyto 4,
cyto_pero 3.66667, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004541)
HIX0004541
HIT000613685 (
ENST00000514168
)
(Conserved hypothetical protein.)
genome : 146,403,965 - 146,435,645 (31,681)
query : 1 - 548 (548/548)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, mito 5, nucl 3, cyto 3, cyto_nucl 3,
E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004541)
HIX0004541
HIT000606685 (
ENST00000506626
)
(Mothers against decapentaplegic homolog 1; MAD homolog 1; Mothers against DPP homolog 1; JV4-1; Mad-related protein 1; SMAD family member 1; SMAD 1; Smad1; hSMAD1; Transforming growth factor-beta-signaling protein 1; BSP-1;)
genome : 146,405,665 - 146,435,855 (30,191)
query : 1 - 518 (518/518)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto_nucl 2, nucl 1.5, cyto 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004541)
HIX0031737
HIT000097204
(
BC042377
)
Representative transcript
(Hypothetical short protein.)
genome : 146,418,230 - 146,424,123 (5,894)
query : 2 - 1,086 (1,085/1,101)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 13, cyto_nucl 9, nucl 3, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031737)
HIX0031737
HIT000608833 (
ENST00000508936
)
(Hypothetical short protein.)
genome : 146,418,225 - 146,424,123 (5,899)
query : 1 - 1,090 (1,090/1,090)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 13, cyto_nucl 9, nucl 3, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031737)
HIX0004541
HIT000220489
(
U57456
)
(Mothers against decapentaplegic homolog 1; MAD homolog 1; Mothers against DPP homolog 1; JV4-1; Mad-related protein 1; SMAD family member 1; SMAD 1; Smad1; hSMAD1; Transforming growth factor-beta-signaling protein 1; BSP-1;)
genome : 146,435,626 - 146,479,231 (43,606)
query : 13 - 1,695 (1,683/1,695)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.993
InterPro :
IPR001132 : SMAD domain, Dwarfin-type
IPR003619 : MAD homology 1, Dwarfin-type
IPR008984 : SMAD/FHA domain
IPR013019 : MAD homology, MH1
IPR013790 : Dwarfin
IPR017855 : SMAD domain-like
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0005667 : Cellular Component : transcription factor complex
0006355 : Biological Process : regulation of transcription, DNA-templated
0007179 : Biological Process : transforming growth factor beta receptor signaling pathway
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 15.8333, cyto 4,
cyto_pero 3.66667, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004541)
HIX0004541
HIT000100306
(
BT007386
)
(Mothers against decapentaplegic homolog 1; MAD homolog 1; Mothers against DPP homolog 1; JV4-1; Mad-related protein 1; SMAD family member 1; SMAD 1; Smad1; hSMAD1; Transforming growth factor-beta-signaling protein 1; BSP-1;)
genome : 146,435,766 - 146,479,085 (43,320)
query : 1 - 1,397 (1,397/1,398)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR001132 : SMAD domain, Dwarfin-type
IPR003619 : MAD homology 1, Dwarfin-type
IPR008984 : SMAD/FHA domain
IPR013019 : MAD homology, MH1
IPR013790 : Dwarfin
IPR017855 : SMAD domain-like
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0005667 : Cellular Component : transcription factor complex
0006355 : Biological Process : regulation of transcription, DNA-templated
0007179 : Biological Process : transforming growth factor beta receptor signaling pathway
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 15.8333, cyto 4,
cyto_pero 3.66667, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004541)
HIX0205955
HIT000613104 (
ENST00000513542
)
(Conserved hypothetical protein.)
genome : 146,435,767 - 146,438,270 (2,504)
query : 1 - 481 (481/481)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14.5, extr 6, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205955)
HIX0004541
HIT000602702 (
ENST00000502342
)
(Mothers against decapentaplegic homolog 1; MAD homolog 1; Mothers against DPP homolog 1; JV4-1; Mad-related protein 1; SMAD family member 1; SMAD 1; Smad1; hSMAD1; Transforming growth factor-beta-signaling protein 1; BSP-1;)
genome : 146,446,872 - 146,461,121 (14,250)
query : 1 - 262 (262/262)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, extr 3, cyto_nucl 3, nucl 2.5, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004541)
HIX0004541
HIT000263932
(
BC069781
)
(Mothers against decapentaplegic homolog 1; MAD homolog 1; Mothers against DPP homolog 1; JV4-1; Mad-related protein 1; SMAD family member 1; SMAD 1; Smad1; hSMAD1; Transforming growth factor-beta-signaling protein 1; BSP-1;)
genome : 146,459,754 - 146,461,633 (1,880)
query : 1 - 1,880 (1,880/1,880)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
InterPro :
IPR013790 : Dwarfin
GO :
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004541)
HIX0004541
HIT000263862
(
BC069711
)
(Mothers against decapentaplegic homolog 1; MAD homolog 1; Mothers against DPP homolog 1; JV4-1; Mad-related protein 1; SMAD family member 1; SMAD 1; Smad1; hSMAD1; Transforming growth factor-beta-signaling protein 1; BSP-1;)
genome : 146,459,754 - 146,461,592 (1,839)
query : 1 - 1,838 (1,838/1,838)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
InterPro :
IPR013790 : Dwarfin
GO :
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004541)
HIX0004541
HIT000263955
(
BC069804
)
(Mothers against decapentaplegic homolog 1; MAD homolog 1; Mothers against DPP homolog 1; JV4-1; Mad-related protein 1; SMAD family member 1; SMAD 1; Smad1; hSMAD1; Transforming growth factor-beta-signaling protein 1; BSP-1;)
genome : 146,459,758 - 146,461,593 (1,836)
query : 2 - 1,837 (1,836/1,837)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 0.999
InterPro :
IPR013790 : Dwarfin
GO :
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004541)
HIX0004541
HIT000021479
(
AK096624
)
(Mothers against decapentaplegic homolog 1; MAD homolog 1; Mothers against DPP homolog 1; JV4-1; Mad-related protein 1; SMAD family member 1; SMAD 1; Smad1; hSMAD1; Transforming growth factor-beta-signaling protein 1; BSP-1;)
genome : 146,465,330 - 146,479,231 (13,902)
query : 2 - 3,294 (3,293/3,294)
3 exons
identity = 0.998
5'(0.998;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001132 : SMAD domain, Dwarfin-type
IPR008984 : SMAD/FHA domain
IPR013790 : Dwarfin
IPR017855 : SMAD domain-like
GO :
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 8, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004541)
HIX0004541
HIT000610860 (
ENST00000511125
)
(Mothers against decapentaplegic homolog 1; MAD homolog 1; Mothers against DPP homolog 1; JV4-1; Mad-related protein 1; SMAD family member 1; SMAD 1; Smad1; hSMAD1; Transforming growth factor-beta-signaling protein 1; BSP-1;)
genome : 146,465,330 - 146,479,231 (13,902)
query : 1 - 3,293 (3,293/3,293)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 8, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004541)
HIX0004541
HIT000610693 (
ENST00000510948
)
(Mothers against decapentaplegic homolog 1; MAD homolog 1; Mothers against DPP homolog 1; JV4-1; Mad-related protein 1; SMAD family member 1; SMAD 1; Smad1; hSMAD1; Transforming growth factor-beta-signaling protein 1; BSP-1;)
genome : 146,467,229 - 146,475,187 (7,959)
query : 1 - 569 (569/569)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 10.5, nucl 8, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004541)
HIX0004541
HIT000610981 (
ENST00000511255
)
(Mothers against decapentaplegic homolog 1; MAD homolog 1; Mothers against DPP homolog 1; JV4-1; Mad-related protein 1; SMAD family member 1; SMAD 1; Smad1; hSMAD1; Transforming growth factor-beta-signaling protein 1; BSP-1;)
genome : 146,467,672 - 146,475,069 (7,398)
query : 1 - 539 (539/539)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 4, cyto 4, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004541)
HIX0004542
HIT000027140
(
AL832228
)
Representative transcript
(Conserved hypothetical protein.)
genome : 146,502,532 - 146,509,302 (6,771)
query : 1 - 3,064 (3,064/3,080)
3 exons
identity = 0.999
3'(0.999;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto_nucl 6.5, nucl 5, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004542)
HIX0205491
HIT000604893 (
ENST00000504710
)
(Hypothetical short protein.)
genome : 146,520,261 - 146,521,704 (1,444)
query : 1 - 403 (403/403)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15, mito 11, cyto_nucl 9.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205491)
HIX0216074
HIT000606955 (
ENST00000506919
)
(ArgK protein family protein.)
genome : 146,540,137 - 146,567,774 (27,638)
query : 1 - 1,687 (1,687/1,687)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, mito 11, cyto_nucl 7, extr 3, golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216074)
HIX0205935
HIT000612794 (
ENST00000513203
)
(Nuclear coactivator family protein.)
genome : 146,545,311 - 146,547,187 (1,877)
query : 1 - 1,877 (1,877/1,877)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 12.5, extr 9, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205935)
HIX0205487
HIT000604760 (
ENST00000504555
)
(Conserved hypothetical protein.)
genome : 146,563,488 - 146,571,776 (8,289)
query : 1 - 745 (745/745)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 12, cyto_nucl 8, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205487)
HIX0216064
HIT000603999 (
ENST00000503730
)
(ArgK protein family protein.)
genome : 146,572,071 - 146,576,646 (4,576)
query : 1 - 727 (727/727)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, nucl 6, mito 5, extr 4, mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216064)
HIX0216007
HIT000019577
(
AK094722
)
Representative transcript
(Conserved hypothetical protein.)
genome : 146,578,404 - 146,581,186 (2,783)
query : 1 - 2,781 (2,781/2,781)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 8.5, cyto 8, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216007)
HIX0114515
HIT000398118 (
NM_001080531
)
(Conserved hypothetical protein.)
genome : 146,601,356 - 146,653,949 (52,594)
query : 1 - 846 (846/846)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, extr 12, cyto_nucl 10.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0114515)
HIX0114515
HIT000536665 (
ENST00000438731
)
(Conserved hypothetical protein.)
genome : 146,601,356 - 146,653,949 (52,594)
query : 1 - 846 (846/846)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, extr 12, cyto_nucl 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0114515)
HIX0114515
HIT000611653 (
ENST00000511965
)
(Conserved hypothetical protein.)
genome : 146,601,477 - 146,653,946 (52,470)
query : 1 - 722 (722/722)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0114515)
HIX0114515
HIT000608873 (
ENST00000508981
)
(Conserved hypothetical protein.)
genome : 146,653,605 - 146,675,503 (21,899)
query : 1 - 312 (312/312)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 9.5, cyto 8.5, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0114515)
HIX0114515
HIT000609920 (
ENST00000510096
)
(Conserved hypothetical protein.)
genome : 146,653,606 - 146,692,184 (38,579)
query : 1 - 211 (211/211)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 9.5, cyto_nucl 9, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0114515)
HIX0004544
HIT000608694 (
ENST00000508784
)
(Zinc finger protein 827.)
genome : 146,678,779 - 146,859,787 (181,009)
query : 1 - 7,463 (7,463/7,463)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004544)
HIX0004544
HIT000093004
(
BC033248
)
(Conserved hypothetical protein.)
genome : 146,678,802 - 146,681,729 (2,928)
query : 1 - 2,928 (2,928/2,945)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004544)
HIX0004544
HIT000024681
(
AL117519
)
(Hypothetical short protein.)
genome : 146,680,160 - 146,681,271 (1,112)
query : 3 - 1,114 (1,112/1,124)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 12, cyto_nucl 11.3333, cyto_pero 7.5,
nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004544)
HIX0004544
HIT000249718
(
AK131430
)
(Conserved hypothetical protein.)
genome : 146,680,851 - 146,684,374 (3,524)
query : 1 - 3,523 (3,523/3,523)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004544)
HIX0004544
HIT000018991
(
AK094136
)
(Zinc finger protein 827.)
genome : 146,680,852 - 146,770,536 (89,685)
query : 1 - 3,004 (3,004/3,004)
10 exons
identity = 0.999
3'(0.999;1.000;1.000;0.995;1.000;1.000;0.993;
1.000;0.983;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004544)
HIX0004544
HIT000384935
(
AK225805
)
Representative transcript
(Zinc finger protein 827.)
genome : 146,681,889 - 146,859,787 (177,899)
query : 1 - 4,353 (4,353/4,368)
15 exons
identity = 1.000
3'(1.000;0.970;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004544)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB056797
Gallus
sp. (Chicken) : CR389399
Bos
sp. (Cow) : ENSBTAT00000016933
Danio
sp. (Zebrafish) : ENSDART00000037516
Oryzias
sp. (Medaka) : ENSORLT00000009271
Pongo
sp. (Orangutan) : ENSPPYT00000017553
Pan
sp. (Chimpanzee) : ENSPTRT00000030644
Tetraodon
sp. (Tetraodon) : GSTENT00032867001
Takifugu
sp. (Fugu) : SINFRUT00000133788
Monodelphis
sp. (Opossum) : XM_001376958
Equus
sp. (Horse) : XM_001500552
Canis
sp. (Dog) : XM_862289
HIX0004544
HIT000318200 (
NM_178835
)
(Zinc finger protein 827.)
genome : 146,681,889 - 146,859,607 (177,719)
query : 1 - 4,182 (4,182/4,197)
15 exons
identity = 0.999
3'(1.000;1.000;0.984;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004544)
HIX0004544
HIT000093175
(
BC033655
)
(Zinc finger protein 827.)
genome : 146,681,889 - 146,686,319 (4,431)
query : 16 - 1,090 (1,075/1,104)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.986
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004544)
HIX0004544
HIT000243098
(
AF450485
)
(Zinc finger protein 827.)
genome : 146,681,881 - 146,859,641 (177,761)
query : 7 - 3,171 (3,165/3,171)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;0.994;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004544)
HIX0004544
HIT000612900 (
ENST00000513320
)
(Zinc finger protein 827.)
genome : 146,681,881 - 146,859,641 (177,761)
query : 1 - 3,165 (3,165/3,165)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004544)
HIX0004544
HIT000328535
(
AB074279
)
(Zinc finger protein 827.)
genome : 146,681,885 - 146,744,629 (62,745)
query : 1 - 1,769 (1,769/1,769)
7 exons
identity = 0.999
3'(1.000;0.994;0.995;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004544)
HIX0004544
HIT000360727 (
ENST00000379448
)
(Zinc finger protein 827.)
genome : 146,681,890 - 146,859,623 (177,734)
query : 1 - 4,197 (4,197/4,197)
15 exons
identity = 0.999
3'(1.000;1.000;0.984;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004544)
HIX0004544
HIT000015997
(
AK091130
)
(Zinc finger protein 827.)
genome : 146,681,890 - 146,859,582 (177,693)
query : 1 - 4,156 (4,156/4,156)
15 exons
identity = 0.998
3'(1.000;1.000;0.984;1.000;0.994;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.996;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004544)
HIX0004544
HIT000013106
(
AK056492
)
(Zinc finger protein 827.)
genome : 146,681,890 - 146,823,683 (141,794)
query : 1 - 3,396 (3,396/3,396)
14 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.994;1.000;
1.000;1.000;1.000;0.996;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004544)
HIX0004544
HIT000603750 (
ENST00000503462
)
(Conserved hypothetical protein.)
genome : 146,682,281 - 146,686,207 (3,927)
query : 1 - 538 (538/538)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004544)
HIX0004544
HIT000611362 (
ENST00000511659
)
(Zinc finger protein 827.)
genome : 146,682,434 - 146,695,819 (13,386)
query : 1 - 858 (858/858)
4 exons
identity = 0.995
3'(1.000;0.979;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004544)
HIX0004544
HIT000387697
(
BC117407
)
(Zinc finger protein 827.)
genome : 146,682,722 - 146,859,623 (176,902)
query : 1 - 3,356 (3,356/3,356)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004544)
HIX0004544
HIT000502028
(
BC143577
)
(Zinc finger protein 827.)
genome : 146,682,724 - 146,859,623 (176,900)
query : 1 - 3,354 (3,354/3,354)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004544)
HIX0004544
HIT000614822 (
ENST00000515386
)
(Zinc finger protein 827.)
genome : 146,685,841 - 146,695,714 (9,874)
query : 1 - 726 (726/726)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004544)
HIX0004544
HIT000609771 (
ENST00000509940
)
(Zinc finger protein 827.)
genome : 146,740,990 - 146,767,144 (26,155)
query : 1 - 400 (400/400)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 11, extr 6, cyto 5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004544)
HIX0024761
HIT000055641
(
BX641101
)
Representative transcript
(Conserved hypothetical protein.)
genome : 146,751,732 - 146,754,513 (2,782)
query : 1 - 2,781 (2,781/2,802)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024761)
HIX0205998
HIT000613840 (
ENST00000514334
)
(Conserved hypothetical protein.)
genome : 146,754,270 - 146,760,732 (6,463)
query : 1 - 794 (794/794)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, mito 11, nucl 5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205998)
HIX0004544
HIT000611249 (
ENST00000511534
)
(Zinc finger protein 827.)
genome : 146,770,503 - 146,791,919 (21,417)
query : 1 - 494 (494/494)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 12.5, cyto 8.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004544)
HIX0004544
HIT000608887 (
ENST00000508995
)
(Zinc finger protein 827.)
genome : 146,791,453 - 146,813,567 (22,115)
query : 1 - 477 (477/477)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004544)
HIX0004544
HIT000613382 (
ENST00000513840
)
(Zinc finger protein 827.)
genome : 146,797,648 - 146,806,900 (9,253)
query : 1 - 434 (434/434)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 10, cyto_nucl 9, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004544)
HIX0004544
HIT000093258
(
BC033879
)
(Non-protein coding transcript.)
genome : 146,859,745 - 146,859,961 (217)
query : 11 - 227 (217/227)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.956
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004544)
HIX0004545
HIT000027132
(
AL832220
)
Representative transcript
(Conserved hypothetical protein.)
genome : 146,973,758 - 146,977,914 (4,157)
query : 1 - 4,157 (4,157/4,194)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004545)
HIX0216105
HIT000683095 (
ENST00000570186
)
(Conserved hypothetical protein.)
genome : 146,973,756 - 146,977,914 (4,159)
query : 1 - 4,159 (4,159/4,159)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, mito 9, cyto_nucl 6.5, cyto 6, nucl 5,
extr_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216105)
HIX0205433
HIT000603869 (
ENST00000503593
)
(Hypothetical short protein.)
genome : 146,998,998 - 147,029,309 (30,312)
query : 1 - 522 (522/522)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, nucl 10.5, cyto_nucl 6.5, E.R. 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205433)
HIX0004546
HIT000660267 (
NR_038331
)
(Hypothetical short protein.)
genome : 147,030,608 - 147,043,065 (12,458)
query : 1 - 1,181 (1,181/1,200)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 8.5, cyto_nucl 8.5, cyto 7.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004546)
HIX0004546
HIT000093090
(
BC033400
)
(Hypothetical short protein.)
genome : 147,030,610 - 147,043,058 (12,449)
query : 1 - 1,172 (1,172/1,188)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 8.5, cyto_nucl 8.5, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004546)
HIX0004546
HIT000611746 (
ENST00000512063
)
(Hypothetical short protein.)
genome : 147,030,607 - 147,043,058 (12,452)
query : 1 - 1,175 (1,175/1,175)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 8.5, cyto_nucl 8.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004546)
HIX0004546
HIT000013847
(
AK057233
)
Representative transcript
(Conserved hypothetical protein.)
genome : 147,030,609 - 147,043,065 (12,457)
query : 1 - 1,715 (1,715/1,715)
5 exons
identity = 0.999
3'(1.000;1.000;1.000;0.998;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto_nucl 7, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004546)
HIX0004546
HIT000607705 (
ENST00000507726
)
(Conserved hypothetical protein.)
genome : 147,030,609 - 147,043,065 (12,457)
query : 1 - 1,715 (1,715/1,715)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto_nucl 7, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004546)
HIX0004546
HIT000615117 (
ENST00000515703
)
(Hypothetical short protein.)
genome : 147,031,975 - 147,032,869 (895)
query : 1 - 451 (451/451)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, mito 7, nucl 6, cyto_nucl 5.5, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004546)
HIX0004546
HIT000605951 (
ENST00000505848
)
(Hypothetical short protein.)
genome : 147,032,311 - 147,032,857 (547)
query : 1 - 420 (420/420)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, mito 7, nucl 6, cyto_nucl 5.5, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004546)
HIX0004546
HIT000612626 (
ENST00000513023
)
(Hypothetical short protein.)
genome : 147,032,582 - 147,033,362 (781)
query : 1 - 411 (411/411)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 13.5, cyto 8.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004546)
HIX0004547
HIT000203616 (
NM_007080
)
(U6 snRNA-associated Sm-like protein LSm6;)
genome : 147,096,835 - 147,111,213 (14,379)
query : 1 - 787 (787/789)
4 exons
identity = 1.000
5'(1.000)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, mito 5, nucl 3, mito_pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004547)
HIX0004547
HIT000114559 (
ENST00000296581
)
(U6 snRNA-associated Sm-like protein LSm6;)
genome : 147,096,837 - 147,111,196 (14,360)
query : 1 - 768 (768/768)
4 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, mito 5, nucl 3, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004547)
HIX0004547
HIT000614751 (
ENST00000515311
)
(U6 snRNA-associated Sm-like protein LSm6;)
genome : 147,096,855 - 147,121,152 (24,298)
query : 1 - 545 (545/545)
5 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, mito 5, nucl 3, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004547)
HIX0004547
HIT000604238 (
ENST00000503982
)
(Conserved hypothetical protein.)
genome : 147,096,879 - 147,104,798 (7,920)
query : 1 - 820 (820/820)
2 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 6.5, cyto_nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004547)
HIX0004547
HIT000089995
(
BC019894
)
Representative transcript
(U6 snRNA-associated Sm-like protein LSm6;)
genome : 147,096,881 - 147,111,197 (14,317)
query : 1 - 1,351 (1,351/1,365)
4 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR001163 : Ribonucleoprotein LSM domain
IPR006649 : Ribonucleoprotein LSM domain, eukaryotic/archaea-type
IPR010920 : Like-Sm (LSM) domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, mito 5, nucl 3, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004547)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK141884
Danio
sp. (Zebrafish) : BC072549
Bos
sp. (Cow) : BC118348
Gallus
sp. (Chicken) : CR354038
Tetraodon
sp. (Tetraodon) : CR719116
Equus
sp. (Horse) : ENSECAT00000022386
Oryzias
sp. (Medaka) : ENSORLT00000009280
Pongo
sp. (Orangutan) : ENSPPYT00000017554
Pan
sp. (Chimpanzee) : ENSPTRT00000030645
Takifugu
sp. (Fugu) : SINFRUT00000133790
Rattus
sp. (Rat) : XM_001070871
Macaca
sp. (Macaque) : XM_001097636
Monodelphis
sp. (Opossum) : XM_001376885
Canis
sp. (Dog) : XM_850069
HIX0004547
HIT000603111 (
ENST00000502781
)
(U6 snRNA-associated Sm-like protein LSm6;)
genome : 147,096,881 - 147,111,198 (14,318)
query : 1 - 1,352 (1,352/1,352)
4 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, mito 5, nucl 3, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004547)
HIX0004547
HIT000037452
(
BC016026
)
(U6 snRNA-associated Sm-like protein LSm6;)
genome : 147,096,881 - 147,111,063 (14,183)
query : 1 - 591 (591/605)
4 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR001163 : Ribonucleoprotein LSM domain
IPR006649 : Ribonucleoprotein LSM domain, eukaryotic/archaea-type
IPR010920 : Like-Sm (LSM) domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, mito 5, nucl 3, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004547)
HIX0004547
HIT000072859
(
AF182292
)
(U6 snRNA-associated Sm-like protein LSm6;)
genome : 147,096,898 - 147,111,080 (14,183)
query : 6 - 596 (591/608)
4 exons
identity = 0.998
5'(1.000)3'
coverage = 0.992
InterPro :
IPR001163 : Ribonucleoprotein LSM domain
IPR006649 : Ribonucleoprotein LSM domain, eukaryotic/archaea-type
IPR010920 : Like-Sm (LSM) domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, mito 5, nucl 3, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004547)
HIX0004547
HIT000245232
(
AJ238098
)
(U6 snRNA-associated Sm-like protein LSm6;)
genome : 147,096,893 - 147,111,063 (14,171)
query : 1 - 579 (579/596)
4 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR001163 : Ribonucleoprotein LSM domain
IPR006649 : Ribonucleoprotein LSM domain, eukaryotic/archaea-type
IPR010920 : Like-Sm (LSM) domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, mito 5, nucl 3, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004547)
HIX0004547
HIT000604420 (
ENST00000504181
)
(U6 snRNA-associated Sm-like protein LSm6;)
genome : 147,096,900 - 147,111,339 (14,440)
query : 1 - 549 (549/549)
5 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, mito 5, nucl 3, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004547)
HIX0004547
HIT000430992
(
AK312126
)
(U6 snRNA-associated Sm-like protein LSm6;)
genome : 147,096,900 - 147,110,808 (13,909)
query : 1 - 317 (317/317)
4 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR001163 : Ribonucleoprotein LSM domain
IPR006649 : Ribonucleoprotein LSM domain, eukaryotic/archaea-type
IPR010920 : Like-Sm (LSM) domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, mito 5, nucl 3, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004547)
HIX0004547
HIT000610135 (
ENST00000510331
)
(Hypothetical short protein.)
genome : 147,096,922 - 147,097,838 (917)
query : 1 - 561 (561/561)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004547)
HIX0216177
HIT000553545 (
ENST00000455611
)
(OTU domain-containing protein 4 isoform 2.)
genome : 146,031,990 - 146,100,793 (68,804)
query : 1 - 2,498 (2,498/2,498)
22 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 15.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216177)
HIX0216177
HIT000485662 (
NM_001102653
)
(OTU domain-containing protein 4 isoform 3.)
genome : 146,054,802 - 146,100,832 (46,031)
query : 1 - 7,068 (7,068/7,068)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 16.5, cyto 6.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216177)
HIX0216177
HIT000497205
(
AK302581
)
Representative transcript
(OTU domain-containing protein 4 isoform 3.)
genome : 146,058,282 - 146,100,794 (42,513)
query : 1 - 3,550 (3,550/3,550)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003323 : Ovarian tumour, otubain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 16.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216177)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB168919
Mus
sp. (Mouse) : AK122429
Rattus
sp. (Rat) : BC083886
Bos
sp. (Cow) : BC153856
Canis
sp. (Dog) : ENSCAFT00000012201
Pongo
sp. (Orangutan) : ENSPPYT00000017547
Tetraodon
sp. (Tetraodon) : GSTENT00008033001
Takifugu
sp. (Fugu) : SINFRUT00000161271
Monodelphis
sp. (Opossum) : XM_001377059
Equus
sp. (Horse) : XM_001500677
Pan
sp. (Chimpanzee) : XR_025439
HIX0216177
HIT000545840 (
ENST00000447906
)
(OTU domain-containing protein 4; HIV-1-induced protein HIN-1;)
genome : 146,058,286 - 146,101,313 (43,028)
query : 1 - 3,829 (3,829/3,829)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216177)
HIX0216177
HIT000387856
(
BC118572
)
(OTU domain-containing protein 4 isoform 3.)
genome : 146,058,395 - 146,095,892 (37,498)
query : 1 - 3,369 (3,369/3,369)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003323 : Ovarian tumour, otubain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 16.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216177)
HIX0216177
HIT000387903
(
BC118653
)
(OTU domain-containing protein 4 isoform 3.)
genome : 146,058,395 - 146,095,892 (37,498)
query : 1 - 3,369 (3,369/3,369)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003323 : Ovarian tumour, otubain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 16.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0216177)
HIX0004543
HIT000112068 (
ENST00000281317
)
(Methylmalonic aciduria type A protein, mitochondrial; EC=3.6.-.-; Precursor;)
genome : 146,539,415 - 146,581,187 (41,773)
query : 1 - 7,068 (7,068/7,068)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13.5, mito_nucl 11, cyto 8, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004543)
HIX0004543
HIT000214708 (
NM_172250
)
(Methylmalonic aciduria type A protein, mitochondrial; EC=3.6.-.-; Precursor;)
genome : 146,560,226 - 146,581,187 (20,962)
query : 20 - 5,943 (5,924/5,943)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.997
EC number :
EC 3.6.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13.5, mito_nucl 11, cyto 8, nucl 7.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004543)
HIX0004543
HIT000046535
(
AK126662
)
Representative transcript
(Methylmalonic aciduria type A protein, mitochondrial; EC=3.6.-.-; Precursor;)
genome : 146,560,226 - 146,579,843 (19,618)
query : 20 - 4,599 (4,580/4,599)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 0.996
EC number :
EC 3.6.-.-
InterPro :
IPR003593 : AAA+ ATPase domain
IPR005129 : ArgK protein
GO :
0000166 : Molecular Function : nucleotide binding
0017111 : Molecular Function : nucleoside-triphosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13.5, mito_nucl 11, cyto 8, nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004543)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK160235
Rattus
sp. (Rat) : BC079139
Bos
sp. (Cow) : BC149875
Danio
sp. (Zebrafish) : BC151912
Gallus
sp. (Chicken) : CR405828
Monodelphis
sp. (Opossum) : ENSMODT00000000621
Oryzias
sp. (Medaka) : ENSORLT00000009253
Pongo
sp. (Orangutan) : ENSPPYT00000017552
Tetraodon
sp. (Tetraodon) : GSTENT00032866001
Takifugu
sp. (Fugu) : SINFRUT00000133759
Equus
sp. (Horse) : XM_001501875
Pan
sp. (Chimpanzee) : XM_526697
Canis
sp. (Dog) : XM_539752
Macaca
sp. (Macaque) : XR_011889
HIX0004543
HIT000336586
(
BC101178
)
(Methylmalonic aciduria type A protein, mitochondrial; EC=3.6.-.-; Precursor;)
genome : 146,560,245 - 146,576,720 (16,476)
query : 1 - 1,438 (1,438/1,438)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.-.-
InterPro :
IPR003593 : AAA+ ATPase domain
IPR005129 : ArgK protein
GO :
0000166 : Molecular Function : nucleotide binding
0017111 : Molecular Function : nucleoside-triphosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13.5, mito_nucl 11, cyto 8, nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004543)
HIX0004543
HIT000336587
(
BC101179
)
(Methylmalonic aciduria type A protein, mitochondrial; EC=3.6.-.-; Precursor;)
genome : 146,560,245 - 146,576,720 (16,476)
query : 1 - 1,438 (1,438/1,438)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.-.-
InterPro :
IPR003593 : AAA+ ATPase domain
IPR005129 : ArgK protein
GO :
0000166 : Molecular Function : nucleotide binding
0017111 : Molecular Function : nucleoside-triphosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13.5, mito_nucl 11, cyto 8, nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004543)
HIX0004543
HIT000336588
(
BC101180
)
(Methylmalonic aciduria type A protein, mitochondrial; EC=3.6.-.-; Precursor;)
genome : 146,560,245 - 146,576,720 (16,476)
query : 1 - 1,352 (1,352/1,352)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.-.-
InterPro :
IPR005129 : ArgK protein
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14.5, cyto_mito 11.5, cyto 7.5, extr 3, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004543)
HIX0004543
HIT000336589
(
BC101181
)
(Methylmalonic aciduria type A protein, mitochondrial; EC=3.6.-.-; Precursor;)
genome : 146,560,245 - 146,576,720 (16,476)
query : 1 - 1,437 (1,437/1,437)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
EC number :
EC 3.6.-.-
InterPro :
IPR003593 : AAA+ ATPase domain
IPR005129 : ArgK protein
GO :
0000166 : Molecular Function : nucleotide binding
0017111 : Molecular Function : nucleoside-triphosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13.5, mito_nucl 11, cyto 8, nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004543)
HIX0004543
HIT000611656 (
ENST00000511969
)
(Methylmalonic aciduria type A protein, mitochondrial; EC=3.6.-.-; Precursor;)
genome : 146,560,245 - 146,576,720 (16,476)
query : 1 - 1,352 (1,352/1,352)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14.5, cyto_mito 11.5, cyto 7.5, extr 3, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004543)
HIX0004543
HIT000640644 (
ENST00000541599
)
(Methylmalonic aciduria type A protein, mitochondrial; EC=3.6.-.-; Precursor;)
genome : 146,560,245 - 146,576,720 (16,476)
query : 1 - 1,352 (1,352/1,352)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14.5, cyto_mito 11.5, cyto 7.5, extr 3, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0004543)
HIX0031771
pHIT000008756 ( pHIT000008756 )
Representative transcript
(Conserved hypothetical protein.)
genome : 146,296,695 - 146,297,405 (711)
query : 1 - 711 (711/711)
1 exon
InterPro :
IPR003388 : Reticulon
SOSUI :
MEMBRANE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031771)
CAGE tag :
H04BB12G1906,H08BA16N1902
HIX0205240
eHIT000018008 ( ESTsASS_4_927 )
Representative transcript
(Non-protein coding transcript.)
genome : 146,101,334 - 146,153,498 (52,165)
query : 1 - 531 (531/531)
4 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205240)
ESTs used for assembly :
AI286100,AA952934,AA918305 Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : XM_530753
AC106871.5
145500001-145542809 F +
NCBI
AC098588.3
145542810-145755754 F +
NCBI
AC107213.4
145755755-145760967 F +
NCBI
AC109811.4
145760968-145852934 F +
NCBI
AC097649.3
145852935-145954176 F +
NCBI
AC096757.3
145954177-146140640 F +
NCBI
AC114753.2
146140641-146145023 F +
NCBI
AC079228.7
146145024-146303848 F +
NCBI
AC096726.3
146303849-146339096 F +
NCBI
AC093796.3
146339097-146503025 F +
NCBI
AC093864.3
146503026-146629360 F +
NCBI
AC107212.5
146629361-146710382 F +
NCBI
AC104791.3
146710383-146868351 F +
NCBI
AC108206.3
146868352-147011851 F +
NCBI
AC097372.3
147011852-147100000 F +
NCBI