bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0017935
HIT000597403 (
ENST00000493990
)
(ADP-ribosylation factor-like protein 6; Bardet-Biedl syndrome 3 protein;)
genome : 97,483,365 - 97,519,953 (36,589)
query : 1 - 1,705 (1,705/1,705)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, extr 8, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017935)
HIX0017935
HIT000568526 (
ENST00000463745
)
(ADP-ribosylation factor-like protein 6; Bardet-Biedl syndrome 3 protein;)
genome : 97,483,372 - 97,517,373 (34,002)
query : 1 - 1,518 (1,518/1,518)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, extr 8, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017935)
HIX0017935
HIT000567249 (
ENST00000462412
)
(ADP-ribosylation factor-like protein 6; Bardet-Biedl syndrome 3 protein;)
genome : 97,483,377 - 97,503,897 (20,521)
query : 1 - 884 (884/894)
6 exons
identity = 0.999
5'(0.990)3'
coverage = 0.989
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 8, cyto_pero 8, mito 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017935)
HIX0017935
HIT000039785
(
BC024239
)
Representative transcript
(ADP-ribosylation factor-like protein 6; Bardet-Biedl syndrome 3 protein;)
genome : 97,483,595 - 97,519,952 (36,358)
query : 1 - 1,472 (1,472/1,487)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.995)3'
coverage = 1.000
InterPro :
IPR005225 : Small GTP-binding protein domain
IPR006689 : Small GTPase superfamily, ARF/SAR type
IPR024156 : Small GTPase superfamily, ARF type
GO :
0005525 : Molecular Function : GTP binding
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, extr 8, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017935)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB170608
Mus
sp. (Mouse) : AK003778
Danio
sp. (Zebrafish) : BC086734
Bos
sp. (Cow) : BC122575
Tetraodon
sp. (Tetraodon) : CR683928
Pongo
sp. (Orangutan) : CR861460
Monodelphis
sp. (Opossum) : ENSMODT00000039608
Oryzias
sp. (Medaka) : ENSORLT00000006381
Oryzias
sp. (Medaka) : ENSORLT00000019517
Tetraodon
sp. (Tetraodon) : GSTENT00017902001
Takifugu
sp. (Fugu) : SINFRUT00000143142
Rattus
sp. (Rat) : XM_001056633
Pan
sp. (Chimpanzee) : XM_001139194
Equus
sp. (Horse) : XM_001504416
Canis
sp. (Dog) : XM_844805
HIX0017935
HIT000210428 (
NM_032146
)
(ADP-ribosylation factor-like protein 6; Bardet-Biedl syndrome 3 protein;)
genome : 97,483,595 - 97,517,372 (33,778)
query : 1 - 1,393 (1,393/1,408)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, extr 8, nucl 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017935)
HIX0017935
HIT000215523 (
NM_177976
)
(ADP-ribosylation factor-like protein 6; Bardet-Biedl syndrome 3 protein;)
genome : 97,483,595 - 97,517,372 (33,778)
query : 1 - 1,353 (1,353/1,368)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, extr 8, nucl 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017935)
HIX0017935
HIT000129882 (
ENST00000335979
)
(ADP-ribosylation factor-like protein 6; Bardet-Biedl syndrome 3 protein;)
genome : 97,483,595 - 97,517,369 (33,775)
query : 1 - 1,390 (1,390/1,390)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, extr 8, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017935)
HIX0017935
HIT000477624 (
ENST00000394206
)
(ADP-ribosylation factor-like protein 6; Bardet-Biedl syndrome 3 protein;)
genome : 97,483,595 - 97,517,369 (33,775)
query : 1 - 1,350 (1,350/1,350)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, extr 8, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017935)
HIX0017935
HIT000425755
(
AK292958
)
(ADP-ribosylation factor-like protein 6; Bardet-Biedl syndrome 3 protein;)
genome : 97,483,602 - 97,517,088 (33,487)
query : 1 - 1,003 (1,003/1,003)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR005225 : Small GTP-binding protein domain
IPR006689 : Small GTPase superfamily, ARF/SAR type
IPR024156 : Small GTPase superfamily, ARF type
GO :
0005525 : Molecular Function : GTP binding
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, extr 8, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017935)
HIX0017935
HIT000429695
(
AK310829
)
(ADP-ribosylation factor-like protein 6; Bardet-Biedl syndrome 3 protein;)
genome : 97,483,611 - 97,510,191 (26,581)
query : 1 - 851 (851/851)
7 exons
identity = 0.999
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR005225 : Small GTP-binding protein domain
IPR006689 : Small GTPase superfamily, ARF/SAR type
IPR024156 : Small GTPase superfamily, ARF type
GO :
0005525 : Molecular Function : GTP binding
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 12, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017935)
HIX0017935
HIT000600021 (
ENST00000496713
)
(ADP-ribosylation factor-like protein 6; Bardet-Biedl syndrome 3 protein;)
genome : 97,483,611 - 97,510,191 (26,581)
query : 1 - 851 (851/851)
7 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 12, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017935)
HIX0017935
HIT000430147
(
AK311281
)
(ADP-ribosylation factor-like protein 6; Bardet-Biedl syndrome 3 protein;)
genome : 97,483,629 - 97,518,123 (34,495)
query : 1 - 810 (810/810)
3 exons
identity = 0.993
5'(0.990)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 5.5, cyto_nucl 5.5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017935)
HIX0017935
HIT000025411
(
AL136815
)
(ADP-ribosylation factor-like protein 6; Bardet-Biedl syndrome 3 protein;)
genome : 97,486,938 - 97,517,008 (30,071)
query : 1 - 690 (690/717)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR005225 : Small GTP-binding protein domain
IPR006689 : Small GTPase superfamily, ARF/SAR type
IPR024156 : Small GTPase superfamily, ARF type
GO :
0005525 : Molecular Function : GTP binding
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, extr 8, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017935)
HIX0017935
HIT000580931 (
ENST00000476753
)
(ADP-ribosylation factor-like protein 6; Bardet-Biedl syndrome 3 protein;)
genome : 97,503,861 - 97,517,379 (13,519)
query : 1 - 675 (675/675)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, mito 12, cyto_nucl 10, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017935)
HIX0017935
HIT000597762 (
ENST00000494363
)
(Conserved hypothetical protein.)
genome : 97,512,216 - 97,519,951 (7,736)
query : 1 - 553 (553/553)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 11, extr 8, nucl 3, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017935)
HIX0003488
HIT000214377 (
NM_153605
)
(Beta/gamma crystallin domain-containing protein 3;)
genome : 97,540,884 - 97,663,830 (122,947)
query : 1 - 10,752 (10,752/10,767)
22 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003488)
HIX0003488
HIT000517521 (
ENST00000419587
)
(Beta/gamma crystallin domain-containing protein 3.)
genome : 97,540,884 - 97,594,133 (53,250)
query : 1 - 4,262 (4,262/4,262)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003488)
HIX0003488
HIT000491590
(
AK296966
)
(Beta/gamma crystallin domain-containing protein 3.)
genome : 97,540,884 - 97,594,132 (53,249)
query : 1 - 4,261 (4,261/4,261)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003488)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : CR407575
Rattus
sp. (Rat) : XM_001057435
Equus
sp. (Horse) : XM_001502524
Canis
sp. (Dog) : XM_535710
Bos
sp. (Cow) : XM_594681
HIX0003489
HIT000050178
(
AK130907
)
(Hypothetical protein.)
genome : 97,594,157 - 97,663,801 (69,645)
query : 1 - 1,735 (1,735/1,735)
2 exons
identity = 0.996
3'(0.999;0.994)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003489)
HIX0003488
HIT000057000
(
BX648353
)
Representative transcript
(Beta/gamma crystallin domain-containing protein 3;)
genome : 97,595,819 - 97,663,802 (67,984)
query : 1 - 4,775 (4,775/4,793)
19 exons
identity = 0.997
5'(0.996;1.000;1.000;1.000;0.993;1.000;1.000;
0.993;1.000;1.000;1.000;1.000;0.991;1.000;
1.000;1.000;0.994;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR000772 : Ricin B lectin domain
IPR001064 : Beta/gamma crystallin
IPR011024 : Gamma-crystallin-related
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003488)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB056765
Mus
sp. (Mouse) : BC043118
Gallus
sp. (Chicken) : CR407575
Oryzias
sp. (Medaka) : ENSORLT00000016033
Rattus
sp. (Rat) : XM_001057435
Monodelphis
sp. (Opossum) : XM_001380476
Equus
sp. (Horse) : XM_001917475
Pan
sp. (Chimpanzee) : XM_526496
Canis
sp. (Dog) : XM_535710
Bos
sp. (Cow) : XM_594681
HIX0003488
HIT000102580 (
ENST00000182096
)
(Beta/gamma crystallin domain-containing protein 3;)
genome : 97,595,819 - 97,663,807 (67,989)
query : 1 - 4,782 (4,782/4,782)
19 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003488)
HIX0003488
HIT000306352
(
CR749313
)
(Beta/gamma crystallin domain-containing protein 3.)
genome : 97,596,748 - 97,663,810 (67,063)
query : 1 - 3,861 (3,861/3,878)
19 exons
identity = 0.998
5'(0.993;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.991;1.000;
1.000;1.000;0.994;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR000772 : Ricin B lectin domain
IPR001064 : Beta/gamma crystallin
IPR011024 : Gamma-crystallin-related
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 15.5, nucl 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003488)
HIX0003488
HIT000055726
(
BX647079
)
(Beta/gamma crystallin domain-containing protein 3.)
genome : 97,607,241 - 97,663,826 (56,586)
query : 1 - 3,238 (3,238/3,380)
14 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.994;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR000772 : Ricin B lectin domain
IPR001064 : Beta/gamma crystallin
IPR011024 : Gamma-crystallin-related
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, nucl 8, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003488)
HIX0003488
HIT000016066
(
AK091199
)
(Beta/gamma crystallin domain-containing protein 3.)
genome : 97,607,258 - 97,663,809 (56,552)
query : 1 - 3,202 (3,202/3,202)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR000772 : Ricin B lectin domain
IPR001064 : Beta/gamma crystallin
IPR011024 : Gamma-crystallin-related
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, nucl 8, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003488)
HIX0003488
HIT000243106
(
AF451988
)
(Beta/gamma crystallin domain-containing protein 3.)
genome : 97,617,730 - 97,663,807 (46,078)
query : 1 - 2,846 (2,846/2,863)
10 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;1.000;0.914;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000772 : Ricin B lectin domain
IPR001064 : Beta/gamma crystallin
IPR011024 : Gamma-crystallin-related
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, cysk 12, cyto_nucl 10, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003488)
HIX0003488
HIT000026839
(
AL831927
)
(Beta/gamma crystallin domain-containing protein 3.)
genome : 97,617,836 - 97,663,806 (45,971)
query : 1 - 2,754 (2,754/2,775)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.994;1.000;0.998)3'
coverage = 0.999
InterPro :
IPR000772 : Ricin B lectin domain
IPR001064 : Beta/gamma crystallin
IPR011024 : Gamma-crystallin-related
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 13, cyto 11, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003488)
HIX0003488
HIT000099179
(
BC050394
)
(Beta/gamma crystallin domain-containing protein 3.)
genome : 97,631,057 - 97,663,807 (32,751)
query : 1 - 2,515 (2,515/2,544)
7 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.994;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR000772 : Ricin B lectin domain
IPR001064 : Beta/gamma crystallin
IPR011024 : Gamma-crystallin-related
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 8, mito 7, extr 5, nucl 3.5,
E.R._mito 3.5, mito_pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003488)
HIX0003488
HIT000023399
(
AK098569
)
(Beta/gamma crystallin domain-containing protein 3.)
genome : 97,643,056 - 97,663,801 (20,746)
query : 1 - 1,252 (1,252/1,252)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;0.994;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000772 : Ricin B lectin domain
IPR001064 : Beta/gamma crystallin
IPR011024 : Gamma-crystallin-related
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 21, cyto 5.5, cyto_nucl 4, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003488)
HIX0003488
HIT000589069 (
ENST00000485253
)
(Beta/gamma crystallin domain-containing protein 3.)
genome : 97,643,056 - 97,663,801 (20,746)
query : 1 - 1,252 (1,252/1,252)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 21, cyto 5.5, cyto_nucl 4, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003488)
HIX0003488
HIT000598768 (
ENST00000495403
)
(Beta/gamma crystallin domain-containing protein 3.)
genome : 97,643,056 - 97,660,105 (17,050)
query : 1 - 578 (578/578)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 12, cyto 10.5, cyto_nucl 6.5, extr 6,
cysk_plas 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003488)
HIX0003488
HIT000396530 (
ENST00000389622
)
(Beta/gamma crystallin domain-containing protein 3.)
genome : 97,652,533 - 97,663,810 (11,278)
query : 14 - 2,342 (2,329/2,342)
5 exons
identity = 0.999
5'(0.986;1.000;1.000;1.000;1.000)3'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 11.5, mito 5, extr 2, nucl 2,
golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003488)
HIX0003488
HIT000094315
(
BC036247
)
(Beta/gamma crystallin domain-containing protein 3.)
genome : 97,652,587 - 97,663,807 (11,221)
query : 1 - 2,276 (2,276/2,308)
5 exons
identity = 0.996
5'(0.989;1.000;0.987;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR000772 : Ricin B lectin domain
IPR001064 : Beta/gamma crystallin
IPR011024 : Gamma-crystallin-related
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 11.5, extr 6, pero 3, extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003488)
HIX0003489
HIT000210873 (
NM_032778
)
(Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA; EC=1.14.11.-; 60S ribosomal protein L27a histidine hydroxylase; Histone lysine demethylase MINA; MYC-induced nuclear antigen; Mineral dust-induced gene protein; Nucleolar protein 52; Ribosomal oxygenase MINA; ROX;)
genome : 97,660,661 - 97,691,295 (30,635)
query : 1 - 5,339 (5,339/5,339)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.11.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, nucl 14.5, cyto 13.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003489)
HIX0003489
HIT000317868 (
NM_153182
)
(Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA; EC=1.14.11.-; 60S ribosomal protein L27a histidine hydroxylase; Histone lysine demethylase MINA; MYC-induced nuclear antigen; Mineral dust-induced gene protein; Nucleolar protein 52; Ribosomal oxygenase MINA; ROX;)
genome : 97,660,661 - 97,691,295 (30,635)
query : 1 - 4,875 (4,875/4,875)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.11.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, nucl 14.5, cyto 13.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003489)
HIX0003489
HIT000397576 (
NM_001042533
)
(Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA; EC=1.14.11.-; 60S ribosomal protein L27a histidine hydroxylase; Histone lysine demethylase MINA; MYC-induced nuclear antigen; Mineral dust-induced gene protein; Nucleolar protein 52; Ribosomal oxygenase MINA; ROX;)
genome : 97,660,661 - 97,691,295 (30,635)
query : 1 - 5,342 (5,342/5,342)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.11.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, nucl 14.5, cyto 13.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003489)
HIX0003489
HIT000724434 (
NM_001261829
)
(Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA; EC=1.14.11.-; 60S ribosomal protein L27a histidine hydroxylase; Histone lysine demethylase MINA; MYC-induced nuclear antigen; Mineral dust-induced gene protein; Nucleolar protein 52; Ribosomal oxygenase MINA; ROX;)
genome : 97,660,661 - 97,691,295 (30,635)
query : 1 - 4,872 (4,872/4,872)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.11.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, nucl 14.5, cyto 13.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003489)
HIX0003489
HIT000306241
(
CR627479
)
(Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA isoform b.)
genome : 97,663,096 - 97,686,300 (23,205)
query : 1 - 2,186 (2,186/2,210)
9 exons
identity = 0.996
3'(0.992;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003347 : JmjC domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 13, mito 6, nucl 4.5, extr 3,
E.R._mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003489)
HIX0003489
HIT000128322 (
ENST00000333396
)
(Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA; EC=1.14.11.-; 60S ribosomal protein L27a histidine hydroxylase; Histone lysine demethylase MINA; MYC-induced nuclear antigen; Mineral dust-induced gene protein; Nucleolar protein 52; Ribosomal oxygenase MINA; ROX;)
genome : 97,663,086 - 97,691,301 (28,216)
query : 1 - 2,923 (2,923/2,923)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.11.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, nucl 14.5, cyto 13.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003489)
HIX0003489
HIT000477616 (
ENST00000394198
)
(Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA; EC=1.14.11.-; 60S ribosomal protein L27a histidine hydroxylase; Histone lysine demethylase MINA; MYC-induced nuclear antigen; Mineral dust-induced gene protein; Nucleolar protein 52; Ribosomal oxygenase MINA; ROX;)
genome : 97,663,195 - 97,691,295 (28,101)
query : 1 - 2,341 (2,341/2,341)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.11.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, nucl 14.5, cyto 13.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003489)
HIX0003489
HIT000343385
(
DQ453796
)
Representative transcript
(Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA; EC=1.14.11.-; 60S ribosomal protein L27a histidine hydroxylase; Histone lysine demethylase MINA; MYC-induced nuclear antigen; Mineral dust-induced gene protein; Nucleolar protein 52; Ribosomal oxygenase MINA; ROX;)
genome : 97,663,195 - 97,691,259 (28,065)
query : 1 - 2,305 (2,305/2,305)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.11.-
InterPro :
IPR003347 : JmjC domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, nucl 14.5, cyto 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003489)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ720509
Mus
sp. (Mouse) : AK031671
Rattus
sp. (Rat) : BC087650
Bos
sp. (Cow) : BC109961
Danio
sp. (Zebrafish) : ENSDART00000022840
Equus
sp. (Horse) : ENSECAT00000008751
Monodelphis
sp. (Opossum) : ENSMODT00000021603
Pongo
sp. (Orangutan) : ENSPPYT00000015835
Macaca
sp. (Macaque) : XM_001086381
Pan
sp. (Chimpanzee) : XM_001139930
Canis
sp. (Dog) : XM_850582
HIX0003489
HIT000251520
(
AY302110
)
(Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA; EC=1.14.11.-; 60S ribosomal protein L27a histidine hydroxylase; Histone lysine demethylase MINA; MYC-induced nuclear antigen; Mineral dust-induced gene protein; Nucleolar protein 52; Ribosomal oxygenase MINA; ROX;)
genome : 97,663,195 - 97,690,998 (27,804)
query : 1 - 2,511 (2,511/2,511)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.11.-
InterPro :
IPR003347 : JmjC domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, nucl 14.5, cyto 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003489)
HIX0003489
HIT000606737 (
ENST00000506682
)
(Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA isoform a.)
genome : 97,663,250 - 97,668,868 (5,619)
query : 1 - 1,297 (1,297/1,297)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto 9, cyto_nucl 7.5, mito_pero 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003489)
HIX0003489
HIT000061401
(
AB083189
)
(Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA; EC=1.14.11.-; 60S ribosomal protein L27a histidine hydroxylase; Histone lysine demethylase MINA; MYC-induced nuclear antigen; Mineral dust-induced gene protein; Nucleolar protein 52; Ribosomal oxygenase MINA; ROX;)
genome : 97,663,404 - 97,690,931 (27,528)
query : 1 - 2,218 (2,218/2,224)
10 exons
identity = 0.991
3'(0.974;1.000;1.000;1.000;1.000;0.990;1.000;
1.000;1.000;1.000)5'
coverage = 0.997
EC number :
EC 1.14.11.-
InterPro :
IPR003347 : JmjC domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, nucl 14.5, cyto 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003489)
HIX0003489
HIT000061402
(
AB083190
)
(Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA; EC=1.14.11.-; 60S ribosomal protein L27a histidine hydroxylase; Histone lysine demethylase MINA; MYC-induced nuclear antigen; Mineral dust-induced gene protein; Nucleolar protein 52; Ribosomal oxygenase MINA; ROX;)
genome : 97,663,404 - 97,690,931 (27,528)
query : 1 - 2,215 (2,215/2,221)
10 exons
identity = 0.991
3'(0.974;1.000;1.000;1.000;1.000;0.990;1.000;
1.000;1.000;1.000)5'
coverage = 0.997
EC number :
EC 1.14.11.-
InterPro :
IPR003347 : JmjC domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, nucl 14.5, cyto 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003489)
HIX0003489
HIT000313672 (
ENST00000360258
)
(Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA; EC=1.14.11.-; 60S ribosomal protein L27a histidine hydroxylase; Histone lysine demethylase MINA; MYC-induced nuclear antigen; Mineral dust-induced gene protein; Nucleolar protein 52; Ribosomal oxygenase MINA; ROX;)
genome : 97,663,404 - 97,690,931 (27,528)
query : 1 - 2,232 (2,232/2,232)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.11.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, nucl 14.5, cyto 13.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003489)
HIX0003489
HIT000036904
(
BC014928
)
(Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA; EC=1.14.11.-; 60S ribosomal protein L27a histidine hydroxylase; Histone lysine demethylase MINA; MYC-induced nuclear antigen; Mineral dust-induced gene protein; Nucleolar protein 52; Ribosomal oxygenase MINA; ROX;)
genome : 97,663,656 - 97,690,982 (27,327)
query : 1 - 2,034 (2,034/2,048)
10 exons
identity = 0.999
3'(1.000;0.989;1.000;1.000;1.000;0.990;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.11.-
InterPro :
IPR003347 : JmjC domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, nucl 14.5, cyto 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003489)
HIX0003489
HIT000253476
(
AY390536
)
(Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA; EC=1.14.11.-; 60S ribosomal protein L27a histidine hydroxylase; Histone lysine demethylase MINA; MYC-induced nuclear antigen; Mineral dust-induced gene protein; Nucleolar protein 52; Ribosomal oxygenase MINA; ROX;)
genome : 97,663,656 - 97,690,980 (27,325)
query : 1 - 2,032 (2,032/2,046)
10 exons
identity = 0.999
3'(1.000;0.989;1.000;1.000;1.000;0.990;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.14.11.-
InterPro :
IPR003347 : JmjC domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, nucl 14.5, cyto 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003489)
HIX0003489
HIT000010571
(
AK027299
)
(Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA; EC=1.14.11.-; 60S ribosomal protein L27a histidine hydroxylase; Histone lysine demethylase MINA; MYC-induced nuclear antigen; Mineral dust-induced gene protein; Nucleolar protein 52; Ribosomal oxygenase MINA; ROX;)
genome : 97,663,649 - 97,686,477 (22,829)
query : 21 - 1,834 (1,814/1,834)
9 exons
identity = 0.997
3'(0.996;0.989;1.000;1.000;1.000;0.990;1.000;
0.992;1.000)5'
coverage = 0.989
EC number :
EC 1.14.11.-
InterPro :
IPR003347 : JmjC domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, nucl 15.5, cyto 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003489)
HIX0003489
HIT000254786
(
AY456380
)
(Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA isoform a.)
genome : 97,663,718 - 97,690,826 (27,109)
query : 1 - 1,552 (1,552/1,552)
10 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.990;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003347 : JmjC domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 14, extr 10, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003489)
HIX0003489
HIT000603801 (
ENST00000503517
)
(Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA isoform a.)
genome : 97,664,021 - 97,670,027 (6,007)
query : 1 - 912 (912/912)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 12, extr 10, cyto 5, extr_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003489)
HIX0003489
HIT000603407 (
ENST00000503097
)
(Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA isoform b.)
genome : 97,664,182 - 97,666,245 (2,064)
query : 1 - 591 (591/591)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 9.5, cyto_nucl 9.5, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003489)
HIX0003489
HIT000061403
(
AB083191
)
(Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA isoform a.)
genome : 97,666,260 - 97,686,467 (20,208)
query : 1 - 1,225 (1,225/1,225)
8 exons
identity = 0.996
3'(1.000;1.000;1.000;0.990;0.990;0.992;1.000;
0.996)5'
coverage = 1.000
InterPro :
IPR003347 : JmjC domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 12, nucl 10.5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003489)
HIX0003489
HIT000613823 (
ENST00000514314
)
(Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA isoform a.)
genome : 97,666,260 - 97,686,467 (20,208)
query : 1 - 1,225 (1,225/1,225)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, nucl 11, mito 5, extr 3, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003489)
HIX0003489
HIT000126598 (
ENST00000330299
)
(Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA isoform b.)
genome : 97,671,039 - 97,691,224 (20,186)
query : 1 - 1,349 (1,349/1,349)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, nucl 11, mito 5, extr 3, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003489)
HIX0003489
HIT000607597 (
ENST00000507612
)
(Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA isoform b.)
genome : 97,672,851 - 97,680,522 (7,672)
query : 1 - 708 (708/708)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 12.5, extr 6, mito 4, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003489)
HIX0003489
HIT000061404
(
AB083192
)
(Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA isoform b.)
genome : 97,680,498 - 97,691,284 (10,787)
query : 1 - 586 (586/586)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003347 : JmjC domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 7, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003489)
HIX0003489
HIT000061405
(
AB083193
)
(Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA isoform b.)
genome : 97,680,498 - 97,690,974 (10,477)
query : 1 - 743 (743/743)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003347 : JmjC domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 7, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003489)
HIX0003489
HIT000606183 (
ENST00000506099
)
(Bifunctional lysine-specific demethylase and histidyl-hydroxylase MINA isoform b.)
genome : 97,686,101 - 97,690,721 (4,621)
query : 1 - 664 (664/664)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 7, cyto_nucl 4.5, nucl 4, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003489)
HIX0031270
HIT000577150 (
ENST00000472788
)
(Gamma-aminobutyric acid receptor subunit rho-3; GABA(A) receptor subunit rho-3; GABA(C) receptor; Precursor;)
genome : 97,705,517 - 97,753,833 (48,317)
query : 1 - 1,416 (1,416/1,416)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031270)
HIX0031270
HIT000485780 (
NM_001105580
)
(Gamma-aminobutyric acid receptor subunit rho-3; GABA(A) receptor subunit rho-3; GABA(C) receptor; Precursor;)
genome : 97,705,527 - 97,754,148 (48,622)
query : 1 - 1,521 (1,521/1,521)
10 exons
identity = 0.999
3'(1.000;1.000;1.000;0.993;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, golg 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031270)
HIX0031270
HIT000727080 (
NR_047685
)
(Gamma-aminobutyric acid receptor subunit rho-3; GABA(A) receptor subunit rho-3; GABA(C) receptor; Precursor;)
genome : 97,705,527 - 97,754,148 (48,622)
query : 1 - 1,521 (1,521/1,521)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031270)
HIX0031270
HIT000306303
(
CR749263
)
Representative transcript
(Gamma-aminobutyric acid receptor subunit rho-1 isoform c.)
genome : 97,716,289 - 97,754,146 (37,858)
query : 12 - 4,833 (4,822/4,850)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR006028 : Gamma-aminobutyric acid A receptor/Glycine receptor alpha
IPR006029 : Neurotransmitter-gated ion-channel transmembrane domain
IPR006201 : Neurotransmitter-gated ion-channel
GO :
0006811 : Biological Process : ion transport
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 16.5, mito 10, extr_plas 9, lyso 2, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031270)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB168790
Mus
sp. (Mouse) : AK141642
Rattus
sp. (Rat) : D50671
Danio
sp. (Zebrafish) : ENSDART00000081124
Oryzias
sp. (Medaka) : ENSORLT00000008049
Pongo
sp. (Orangutan) : ENSPPYT00000015833
Tetraodon
sp. (Tetraodon) : GSTENT00019019001
Danio
sp. (Zebrafish) : NM_001128760
Takifugu
sp. (Fugu) : SINFRUT00000159458
Monodelphis
sp. (Opossum) : XM_001380507
Equus
sp. (Horse) : XM_001502500
Gallus
sp. (Chicken) : XM_428531
Pan
sp. (Chimpanzee) : XM_526252
Bos
sp. (Cow) : XM_598401
HIX0031270
HIT000575057 (
ENST00000470589
)
(Gamma-aminobutyric acid receptor subunit rho-1 isoform c.)
genome : 97,716,287 - 97,754,148 (37,862)
query : 1 - 4,826 (4,826/4,826)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 16.5, mito 10, extr_plas 9, lyso 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031270)
HIX0205010
HIT000611706 (
ENST00000512021
)
(Conserved hypothetical protein.)
genome : 97,772,218 - 97,772,583 (366)
query : 1 - 366 (366/366)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205010)
HIX0120010
HIT000527173 (
ENST00000429239
)
(Olfactory receptor family protein.)
genome : 97,783,316 - 97,784,240 (925)
query : 1 - 925 (925/925)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 12, cyto 7, nucl 6, E.R._mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0120010)
HIX0200570
HIT000383791
(
AC133439
)
Representative transcript
(Olfactory receptor 5AC2; HSA1;)
genome : 97,803,507 - 97,807,513 (4,007)
query : 1 - 4,006 (4,006/4,006)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR000725 : Olfactory receptor
GO :
0004984 : Molecular Function : olfactory receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200570)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000015832
Rattus
sp. (Rat) : NM_001001102
Mus
sp. (Mouse) : NM_146995
Monodelphis
sp. (Opossum) : XM_001380560
Pan
sp. (Chimpanzee) : XR_023084
HIX0200570
HIT000312318 (
ENST00000358642
)
(Olfactory receptor 5AC2; HSA1;)
genome : 97,806,017 - 97,806,946 (930)
query : 1 - 930 (930/930)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200570)
HIX0200570
HIT000317739 (
NM_054106
)
(Olfactory receptor 5AC2; HSA1;)
genome : 97,806,017 - 97,806,946 (930)
query : 1 - 930 (930/930)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200570)
HIX0200570
HIT000383870
(
AF179759
)
(Olfactory receptor 5AC2; HSA1;)
genome : 97,806,391 - 97,806,877 (487)
query : 1 - 487 (487/487)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR000725 : Olfactory receptor
GO :
0004984 : Molecular Function : olfactory receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 20, extr_plas 5, plas 4.5, extr 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200570)
HIX0204992
HIT000608860 (
ENST00000508964
)
(Hypothetical short protein.)
genome : 97,818,752 - 97,866,978 (48,227)
query : 1 - 467 (467/467)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, mito 8, nucl 7, cyto 4, E.R._mito 4,
mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0204992)
HIX0204996
HIT000609178 (
ENST00000509306
)
(Conserved hypothetical protein.)
genome : 97,823,598 - 97,824,516 (919)
query : 1 - 919 (919/919)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0204996)
HIX0204990
HIT000608670 (
ENST00000508759
)
(Conserved hypothetical protein.)
genome : 97,838,051 - 97,838,558 (508)
query : 1 - 508 (508/508)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 14.5, extr 6, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0204990)
HIX0200568
HIT000308837 (
ENST00000354565
)
(Olfactory receptor 5H1; HTPCRX14;)
genome : 97,851,542 - 97,852,483 (942)
query : 1 - 942 (942/942)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200568)
HIX0200568
HIT000316130 (
NM_001005338
)
(Olfactory receptor 5H1; HTPCRX14;)
genome : 97,851,542 - 97,852,483 (942)
query : 1 - 942 (942/942)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200568)
HIX0200568
HIT000322726
(
X64988
)
Representative transcript
(Olfactory receptor 5H1; HTPCRX14;)
genome : 97,851,916 - 97,852,258 (343)
query : 1 - 343 (343/343)
1 exon
identity = 0.991
5'(0.991)3'
coverage = 1.000
InterPro :
IPR000725 : Olfactory receptor
GO :
0004984 : Molecular Function : olfactory receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200568)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : AF012752
Oryzias
sp. (Medaka) : ENSORLT00000010582
Pongo
sp. (Orangutan) : ENSPPYT00000015831
Pan
sp. (Chimpanzee) : ENSPTRT00000044406
Rattus
sp. (Rat) : ENSRNOT00000050796
Macaca
sp. (Macaque) : XM_001087273
HIX0200572
HIT000500962
(
BC136984
)
Representative transcript
(Olfactory receptor 5H14;)
genome : 97,868,170 - 97,869,249 (1,080)
query : 1 - 1,080 (1,080/1,080)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR000725 : Olfactory receptor
GO :
0004984 : Molecular Function : olfactory receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200572)
Ortholog candidate ( ->
Evola
)
Canis
sp. (Dog) : ENSCAFT00000039723
Pan
sp. (Chimpanzee) : XM_001139230
HIX0200572
HIT000535244 (
ENST00000437310
)
(Olfactory receptor 5H14;)
genome : 97,868,170 - 97,869,249 (1,080)
query : 1 - 1,080 (1,080/1,080)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200572)
HIX0200572
HIT000316210 (
NM_001005514
)
(Olfactory receptor 5H14;)
genome : 97,868,230 - 97,869,162 (933)
query : 1 - 933 (933/933)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200572)
HIX0200573
HIT000316211 (
NM_001005515
)
(Olfactory receptor family protein.)
genome : 97,887,544 - 97,888,485 (942)
query : 1 - 942 (942/942)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200573)
HIX0200573
HIT000343591 (
ENST00000356526
)
(Olfactory receptor family protein.)
genome : 97,887,544 - 97,888,485 (942)
query : 1 - 942 (942/942)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200573)
HIX0204965
HIT000603470 (
ENST00000503164
)
(Conserved hypothetical protein.)
genome : 97,916,055 - 97,916,982 (928)
query : 1 - 928 (928/928)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 17, E.R._mito 4.5, plas 4, nucl 3, mito 3,
extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0204965)
HIX0204962
HIT000603143 (
ENST00000502817
)
(Olfactory receptor family protein.)
genome : 97,926,267 - 97,927,185 (919)
query : 1 - 919 (919/919)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 11, E.R._mito 7.33333, E.R. 5.5, cyto_golg 5.5,
plas 5, extr 4, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0204962)
HIX0205007
HIT000610604 (
ENST00000510851
)
(Olfactory receptor family protein.)
genome : 97,940,888 - 97,941,810 (923)
query : 1 - 923 (923/923)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0205007)
HIX0200574
HIT000337787
(
BC104637
)
Representative transcript
(Olfactory receptor 5H2; Olfactory receptor OR3-10;)
genome : 97,952,495 - 98,176,734 (224,240)
query : 6 - 389 (384/417)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.987
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito 7, nucl 5, cyto_mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200574)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : XM_001087505
Pan
sp. (Chimpanzee) : XM_001139796
HIX0200574
HIT000608538 (
ENST00000508616
)
(Olfactory receptor 5H2; Olfactory receptor OR3-10;)
genome : 97,952,495 - 98,176,742 (224,248)
query : 1 - 392 (392/392)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito 7, nucl 5, cyto_mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200574)
HIX0200564
HIT000383170
(
AB065459
)
Representative transcript
(Olfactory receptor 5H6; Olfactory receptor OR3-11;)
genome : 97,957,113 - 97,958,325 (1,213)
query : 1 - 1,213 (1,213/1,213)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR000725 : Olfactory receptor
GO :
0004984 : Molecular Function : olfactory receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200564)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : XM_001139624
HIX0200564
HIT000613607 (
ENST00000514084
)
(Olfactory receptor 5H6; Olfactory receptor OR3-11;)
genome : 97,957,196 - 97,958,125 (930)
query : 1 - 930 (930/930)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200564)
HIX0030887
HIT000383317
(
AB065667
)
Representative transcript
(Olfactory receptor 5H6; Olfactory receptor OR3-11;)
genome : 97,982,977 - 97,984,306 (1,330)
query : 1 - 1,330 (1,330/1,330)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR000725 : Olfactory receptor
GO :
0004984 : Molecular Function : olfactory receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030887)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : NM_001000945
Pan
sp. (Chimpanzee) : XM_001139706
HIX0030887
HIT000364974 (
ENST00000383696
)
(Olfactory receptor 5H6; Olfactory receptor OR3-11;)
genome : 97,983,088 - 97,984,200 (1,113)
query : 1 - 1,113 (1,113/1,113)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030887)
HIX0030887
HIT000501413
(
BC137523
)
(Olfactory receptor 5H6; Olfactory receptor OR3-11;)
genome : 97,983,088 - 97,984,200 (1,113)
query : 1 - 1,113 (1,113/1,113)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR000725 : Olfactory receptor
GO :
0004984 : Molecular Function : olfactory receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030887)
HIX0030887
HIT000501414
(
BC137524
)
(Olfactory receptor 5H6; Olfactory receptor OR3-11;)
genome : 97,983,088 - 97,984,200 (1,113)
query : 1 - 1,113 (1,113/1,113)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR000725 : Olfactory receptor
GO :
0004984 : Molecular Function : olfactory receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030887)
HIX0030887
HIT000316184 (
NM_001005479
)
(Olfactory receptor 5H6; Olfactory receptor OR3-11;)
genome : 97,983,129 - 97,984,106 (978)
query : 1 - 978 (978/978)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030887)
HIX0030889
HIT000383316
(
AB065666
)
Representative transcript
(Olfactory receptor 5H2; Olfactory receptor OR3-10;)
genome : 98,001,532 - 98,002,876 (1,345)
query : 1 - 1,345 (1,345/1,345)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR000725 : Olfactory receptor
GO :
0004984 : Molecular Function : olfactory receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030889)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : ENSMUST00000062380
Pongo
sp. (Orangutan) : ENSPPYT00000009152
Pan
sp. (Chimpanzee) : ENSPTRT00000028331
Rattus
sp. (Rat) : NM_001000727
Takifugu
sp. (Fugu) : SINFRUT00000183431
Macaca
sp. (Macaque) : XM_001086621
Bos
sp. (Cow) : XM_001252431
Equus
sp. (Horse) : XM_001503746
HIX0030889
HIT000309438 (
ENST00000355273
)
(Olfactory receptor 5H2; Olfactory receptor OR3-10;)
genome : 98,001,732 - 98,002,676 (945)
query : 1 - 945 (945/945)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030889)
HIX0030889
HIT000316186 (
NM_001005482
)
(Olfactory receptor 5H2; Olfactory receptor OR3-10;)
genome : 98,001,732 - 98,002,676 (945)
query : 1 - 945 (945/945)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030889)
HIX0200574
HIT000477609 (
ENST00000394191
)
(Olfactory receptor 5H1; HTPCRX14;)
genome : 98,030,757 - 98,031,687 (931)
query : 1 - 931 (931/931)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200574)
HIX0200569
HIT000309146 (
ENST00000354924
)
(Olfactory receptor family protein.)
genome : 98,072,698 - 98,073,663 (966)
query : 1 - 966 (966/966)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200569)
HIX0200569
HIT000316213 (
NM_001005517
)
(Olfactory receptor family protein.)
genome : 98,072,698 - 98,073,663 (966)
query : 1 - 966 (966/966)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200569)
HIX0031321
HIT000316212 (
NM_001005516
)
(Olfactory receptor family protein.)
genome : 98,109,510 - 98,110,475 (966)
query : 1 - 966 (966/966)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031321)
HIX0031321
HIT000364973 (
ENST00000383695
)
(Olfactory receptor family protein.)
genome : 98,109,510 - 98,110,475 (966)
query : 1 - 966 (966/966)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0031321)
HIX0204662
HIT000577599 (
ENST00000473259
)
(Ubiquitin-like domain containing protein.)
genome : 98,152,878 - 98,153,691 (814)
query : 1 - 814 (814/814)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 15.5, extr 5, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0204662)
HIX0030892
HIT000383169
(
AB065458
)
(Olfactory receptor 5K1; HTPCRX10; Olfactory receptor OR3-8;)
genome : 98,188,221 - 98,189,573 (1,353)
query : 1 - 1,351 (1,351/1,351)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
InterPro :
IPR000725 : Olfactory receptor
GO :
0004984 : Molecular Function : olfactory receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030892)
HIX0030892
HIT000127911 (
ENST00000332650
)
(Olfactory receptor 5K1; HTPCRX10; Olfactory receptor OR3-8;)
genome : 98,188,324 - 98,189,420 (1,097)
query : 1 - 1,097 (1,097/1,097)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030892)
HIX0030892
HIT000500896
(
BC136918
)
Representative transcript
(Olfactory receptor 5K1; HTPCRX10; Olfactory receptor OR3-8;)
genome : 98,188,324 - 98,189,420 (1,097)
query : 1 - 1,097 (1,097/1,097)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR000725 : Olfactory receptor
GO :
0004984 : Molecular Function : olfactory receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030892)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000015829
Rattus
sp. (Rat) : NM_001000047
Macaca
sp. (Macaque) : XM_001086744
Monodelphis
sp. (Opossum) : XM_001380578
Pan
sp. (Chimpanzee) : XM_526253
HIX0030892
HIT000500897
(
BC136919
)
(Olfactory receptor 5K1; HTPCRX10; Olfactory receptor OR3-8;)
genome : 98,188,324 - 98,189,420 (1,097)
query : 1 - 1,097 (1,097/1,097)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR000725 : Olfactory receptor
GO :
0004984 : Molecular Function : olfactory receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030892)
HIX0030892
HIT000315992 (
NM_001004736
)
(Olfactory receptor 5K1; HTPCRX10; Olfactory receptor OR3-8;)
genome : 98,188,421 - 98,189,372 (952)
query : 1 - 952 (952/952)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030892)
HIX0030892
HIT000322722
(
X64984
)
(Olfactory receptor 5K1; HTPCRX10; Olfactory receptor OR3-8;)
genome : 98,188,795 - 98,189,132 (338)
query : 1 - 338 (338/338)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR000725 : Olfactory receptor
GO :
0004984 : Molecular Function : olfactory receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 11, E.R._mito 7.5, cyto 7, extr 4.5,
extr_plas 3.5, cyto_golg 3.5, nucl 3, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030892)
HIX0200571
HIT000383168
(
AB065457
)
Representative transcript
(Olfactory receptor 5K2; Olfactory receptor OR3-9;)
genome : 98,216,325 - 98,217,675 (1,351)
query : 1 - 1,351 (1,351/1,351)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR000725 : Olfactory receptor
GO :
0004984 : Molecular Function : olfactory receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200571)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC131922
Canis
sp. (Dog) : ENSCAFT00000014565
Macaca
sp. (Macaque) : ENSMMUT00000008704
Pongo
sp. (Orangutan) : ENSPPYT00000015828
Rattus
sp. (Rat) : NM_001000048
Bos
sp. (Cow) : XM_001253700
Equus
sp. (Horse) : XM_001917409
HIX0200571
HIT000500718
(
BC136724
)
(Olfactory receptor 5K2; Olfactory receptor OR3-9;)
genome : 98,216,448 - 98,217,507 (1,060)
query : 1 - 1,060 (1,060/1,060)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR000725 : Olfactory receptor
GO :
0004984 : Molecular Function : olfactory receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200571)
HIX0200571
HIT000500719
(
BC136725
)
(Olfactory receptor 5K2; Olfactory receptor OR3-9;)
genome : 98,216,448 - 98,217,496 (1,049)
query : 1 - 1,049 (1,049/1,049)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR000725 : Olfactory receptor
GO :
0004984 : Molecular Function : olfactory receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200571)
HIX0200571
HIT000525272 (
ENST00000427338
)
(Olfactory receptor 5K2; Olfactory receptor OR3-9;)
genome : 98,216,448 - 98,217,496 (1,049)
query : 1 - 1,049 (1,049/1,049)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200571)
HIX0200571
HIT000315993 (
NM_001004737
)
(Olfactory receptor 5K2; Olfactory receptor OR3-9;)
genome : 98,216,525 - 98,217,475 (951)
query : 1 - 951 (951/951)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200571)
HIX0003490
HIT000602652 (
ENST00000502288
)
(Conserved hypothetical protein.)
genome : 98,216,756 - 98,241,731 (24,976)
query : 1 - 560 (560/560)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, plas 4, nucl 4, cyto 3, mito 3,
E.R._mito 2.83333, mito_pero 2.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003490)
HIX0003490
HIT000607844 (
ENST00000507874
)
(PMP-22/EMP/MP20/Claudin superfamily protein.)
genome : 98,219,684 - 98,241,766 (22,083)
query : 1 - 1,380 (1,380/1,380)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 20, extr 6, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003490)
HIX0003490
HIT000253165
(
AY359121
)
(Claudin domain-containing protein 1 isoform a.)
genome : 98,225,321 - 98,240,287 (14,967)
query : 9 - 839 (831/841)
4 exons
identity = 0.998
3'(0.993;1.000;1.000;1.000)5'
coverage = 0.988
InterPro :
IPR004031 : PMP-22/EMP/MP20/Claudin superfamily
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003490)
HIX0003490
HIT000335234
(
BC095441
)
Representative transcript
(Claudin domain-containing protein 1; Membrane protein GENX-3745;)
genome : 98,234,327 - 98,241,725 (7,399)
query : 1 - 2,033 (2,033/2,062)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004031 : PMP-22/EMP/MP20/Claudin superfamily
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003490)
HIX0003490
HIT000024218
(
AL080097
)
(Claudin domain-containing protein 1; Membrane protein GENX-3745;)
genome : 98,234,327 - 98,240,287 (5,961)
query : 22 - 1,978 (1,957/1,998)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.989
InterPro :
IPR004031 : PMP-22/EMP/MP20/Claudin superfamily
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003490)
HIX0003490
HIT000207696 (
NM_019895
)
(PMP-22/EMP/MP20/Claudin superfamily protein.)
genome : 98,234,317 - 98,241,910 (7,594)
query : 1 - 2,235 (2,235/2,244)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003490)
HIX0003490
HIT000366710 (
NM_001040181
)
(PMP-22/EMP/MP20/Claudin superfamily protein.)
genome : 98,234,317 - 98,241,910 (7,594)
query : 1 - 2,184 (2,184/2,193)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003490)
HIX0003490
HIT000366711 (
NM_001040182
)
(PMP-22/EMP/MP20/Claudin superfamily protein.)
genome : 98,234,317 - 98,241,910 (7,594)
query : 1 - 2,228 (2,228/2,237)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003490)
HIX0003490
HIT000366712 (
NM_001040183
)
(PMP-22/EMP/MP20/Claudin superfamily protein.)
genome : 98,234,317 - 98,241,910 (7,594)
query : 1 - 2,179 (2,179/2,188)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003490)
HIX0003490
HIT000366720 (
NM_001040199
)
(PMP-22/EMP/MP20/Claudin superfamily protein.)
genome : 98,234,317 - 98,241,910 (7,594)
query : 1 - 2,491 (2,491/2,500)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003490)
HIX0003490
HIT000366721 (
NM_001040200
)
(PMP-22/EMP/MP20/Claudin superfamily protein.)
genome : 98,234,317 - 98,241,910 (7,594)
query : 1 - 1,874 (1,874/1,883)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 16, plas 4, E.R._mito 3.33333, nucl 3, mito 3,
cyto_plas 3, E.R. 2.5, cyto_nucl 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003490)
HIX0003490
HIT000039624
(
BC022551
)
(Claudin domain-containing protein 1; Membrane protein GENX-3745;)
genome : 98,234,327 - 98,241,726 (7,400)
query : 1 - 1,990 (1,990/2,005)
5 exons
identity = 0.998
3'(0.999;1.000;1.000;0.997;0.971)5'
coverage = 1.000
InterPro :
IPR004031 : PMP-22/EMP/MP20/Claudin superfamily
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003490)
HIX0003490
HIT000133811 (
ENST00000341181
)
(PMP-22/EMP/MP20/Claudin superfamily protein.)
genome : 98,234,317 - 98,241,887 (7,571)
query : 1 - 2,161 (2,161/2,161)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003490)
HIX0003490
HIT000535856 (
ENST00000437922
)
(PMP-22/EMP/MP20/Claudin superfamily protein.)
genome : 98,234,318 - 98,241,910 (7,593)
query : 1 - 2,227 (2,227/2,227)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003490)
HIX0003490
HIT000477599 (
ENST00000394180
)
(PMP-22/EMP/MP20/Claudin superfamily protein.)
genome : 98,234,324 - 98,241,910 (7,587)
query : 1 - 2,228 (2,228/2,228)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003490)
HIX0003490
HIT000246156
(
AJ270952
)
(Claudin domain-containing protein 1; Membrane protein GENX-3745;)
genome : 98,234,327 - 98,241,358 (7,032)
query : 1 - 2,818 (2,818/2,820)
5 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.997)5'
coverage = 0.999
InterPro :
IPR004031 : PMP-22/EMP/MP20/Claudin superfamily
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003490)
HIX0003490
HIT000477600 (
ENST00000394181
)
(PMP-22/EMP/MP20/Claudin superfamily protein.)
genome : 98,234,327 - 98,241,862 (7,536)
query : 1 - 2,170 (2,170/2,170)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003490)
HIX0003490
HIT000477604 (
ENST00000394185
)
(PMP-22/EMP/MP20/Claudin superfamily protein.)
genome : 98,234,327 - 98,241,829 (7,503)
query : 1 - 2,159 (2,159/2,159)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003490)
HIX0003490
HIT000603318 (
ENST00000503004
)
(PMP-22/EMP/MP20/Claudin superfamily protein.)
genome : 98,234,327 - 98,241,358 (7,032)
query : 1 - 2,818 (2,818/2,818)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003490)
HIX0003490
HIT000606923 (
ENST00000506885
)
(PMP-22/EMP/MP20/Claudin superfamily protein.)
genome : 98,234,327 - 98,240,127 (5,801)
query : 1 - 750 (750/750)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 17, mito 4, pero 4, mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003490)
HIX0003490
HIT000613412 (
ENST00000513873
)
(PMP-22/EMP/MP20/Claudin superfamily protein.)
genome : 98,234,328 - 98,236,004 (1,677)
query : 1 - 538 (538/538)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 27, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003490)
HIX0003490
HIT000610330 (
ENST00000510545
)
(PMP-22/EMP/MP20/Claudin superfamily protein.)
genome : 98,234,331 - 98,241,803 (7,473)
query : 1 - 2,124 (2,124/2,124)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003490)
HIX0003490
HIT000050402
(
BC001757
)
(Claudin domain-containing protein 1; Membrane protein GENX-3745;)
genome : 98,234,354 - 98,241,717 (7,364)
query : 1 - 2,003 (2,003/2,020)
6 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004031 : PMP-22/EMP/MP20/Claudin superfamily
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003490)
HIX0003490
HIT000082402
(
AK075367
)
(Claudin domain-containing protein 1; Membrane protein GENX-3745;)
genome : 98,234,355 - 98,241,769 (7,415)
query : 1 - 2,001 (2,001/2,001)
5 exons
identity = 0.997
3'(0.995;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004031 : PMP-22/EMP/MP20/Claudin superfamily
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003490)
HIX0003490
HIT000002121
(
AF161522
)
(Claudin domain-containing protein 1; Membrane protein GENX-3745;)
genome : 98,234,744 - 98,241,738 (6,995)
query : 1 - 1,592 (1,592/1,592)
5 exons
identity = 0.993
3'(0.990;0.993;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003490)
HIX0003490
HIT000036304
(
BC013610
)
(Claudin domain-containing protein 1; Membrane protein GENX-3745;)
genome : 98,234,916 - 98,241,755 (6,840)
query : 1 - 1,430 (1,430/1,444)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004031 : PMP-22/EMP/MP20/Claudin superfamily
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003490)
HIX0003490
HIT000610820 (
ENST00000511081
)
(PMP-22/EMP/MP20/Claudin superfamily protein.)
genome : 98,235,388 - 98,241,749 (6,362)
query : 1 - 642 (642/642)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 16, plas 4, E.R._mito 3.33333, nucl 3, mito 3,
cyto_plas 3, E.R. 2.5, cyto_nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003490)
HIX0003490
HIT000612871 (
ENST00000513287
)
(PMP-22/EMP/MP20/Claudin superfamily protein.)
genome : 98,235,497 - 98,241,598 (6,102)
query : 1 - 999 (999/999)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003490)
HIX0003490
HIT000606962 (
ENST00000506927
)
(PMP-22/EMP/MP20/Claudin superfamily protein.)
genome : 98,235,498 - 98,236,189 (692)
query : 1 - 520 (520/520)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, cyto 2, mito 2, pero 2, lyso 2, cyto_mito 2,
mito_pero 2, cyto_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003490)
HIX0003490
HIT000611370 (
ENST00000511667
)
(PMP-22/EMP/MP20/Claudin superfamily protein.)
genome : 98,235,529 - 98,241,808 (6,280)
query : 1 - 871 (871/871)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 9, plas 7, nucl 6, mito 6, mito_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003490)
HIX0003490
HIT000613021 (
ENST00000513452
)
(PMP-22/EMP/MP20/Claudin superfamily protein.)
genome : 98,235,531 - 98,241,449 (5,919)
query : 1 - 862 (862/862)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003490)
HIX0003490
HIT000602663 (
ENST00000502299
)
(PMP-22/EMP/MP20/Claudin superfamily protein.)
genome : 98,235,547 - 98,241,775 (6,229)
query : 1 - 865 (865/865)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003490)
HIX0003490
HIT000608804 (
ENST00000508902
)
(PMP-22/EMP/MP20/Claudin superfamily protein.)
genome : 98,235,555 - 98,241,885 (6,331)
query : 1 - 916 (916/916)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003490)
HIX0003490
HIT000611826 (
ENST00000512147
)
(PMP-22/EMP/MP20/Claudin superfamily protein.)
genome : 98,235,555 - 98,241,743 (6,189)
query : 1 - 582 (582/582)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 17, plas 4, extr 4, extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003490)
HIX0003490
HIT000610326 (
ENST00000510541
)
(PMP-22/EMP/MP20/Claudin superfamily protein.)
genome : 98,235,618 - 98,241,746 (6,129)
query : 1 - 573 (573/573)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 18, plas 4, extr 3, nucl 2, mito 2, E.R. 2,
E.R._mito 2, cysk_plas 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003490)
HIX0003490
HIT000608430 (
ENST00000508503
)
(Conserved hypothetical protein.)
genome : 98,235,621 - 98,241,799 (6,179)
query : 1 - 707 (707/707)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, cyto 4, mito 4, cyto_mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003490)
HIX0003490
HIT000614025 (
ENST00000514537
)
(PMP-22/EMP/MP20/Claudin superfamily protein.)
genome : 98,235,626 - 98,241,690 (6,065)
query : 1 - 1,013 (1,013/1,013)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003490)
HIX0003490
HIT000607407 (
ENST00000507411
)
(PMP-22/EMP/MP20/Claudin superfamily protein.)
genome : 98,235,667 - 98,241,719 (6,053)
query : 1 - 815 (815/815)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003490)
HIX0003490
HIT000615037 (
ENST00000515620
)
(PMP-22/EMP/MP20/Claudin superfamily protein.)
genome : 98,235,896 - 98,241,450 (5,555)
query : 1 - 663 (663/663)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003490)
HIX0003490
HIT000607908 (
ENST00000507944
)
(PMP-22/EMP/MP20/Claudin superfamily protein.)
genome : 98,235,906 - 98,241,695 (5,790)
query : 1 - 903 (903/903)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003490)
HIX0003490
HIT000608577 (
ENST00000508659
)
(PMP-22/EMP/MP20/Claudin superfamily protein.)
genome : 98,235,920 - 98,241,799 (5,880)
query : 1 - 681 (681/681)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003490)
HIX0003490
HIT000603897 (
ENST00000503621
)
(Conserved hypothetical protein.)
genome : 98,235,956 - 98,241,746 (5,791)
query : 1 - 539 (539/539)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 8, mito 7, cyto_plas 7, cyto 6, mito_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003490)
HIX0003490
HIT000604065 (
ENST00000503799
)
(Conserved hypothetical protein.)
genome : 98,235,983 - 98,241,719 (5,737)
query : 1 - 569 (569/569)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003490)
HIX0003490
HIT000608025 (
ENST00000508071
)
(Conserved hypothetical protein.)
genome : 98,236,002 - 98,241,690 (5,689)
query : 1 - 556 (556/556)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003490)
HIX0003490
HIT000613517 (
ENST00000513988
)
(Conserved hypothetical protein.)
genome : 98,237,579 - 98,241,719 (4,141)
query : 1 - 598 (598/598)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 27, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003490)
HIX0003490
HIT000603294 (
ENST00000502980
)
(Conserved hypothetical protein.)
genome : 98,239,563 - 98,241,746 (2,184)
query : 1 - 778 (778/778)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, extr 6, E.R. 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003490)
HIX0003490
HIT000606636 (
ENST00000506575
)
(Conserved hypothetical protein.)
genome : 98,240,000 - 98,241,446 (1,447)
query : 1 - 414 (414/414)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003490)
HIX0204963
HIT000603313 (
ENST00000502999
)
(Hypothetical short protein.)
genome : 98,241,414 - 98,244,178 (2,765)
query : 1 - 388 (388/388)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0204963)
HIX0204960
HIT000602734 (
ENST00000502376
)
(Ribosomal protein L38e family protein.)
genome : 98,243,905 - 98,244,118 (214)
query : 1 - 214 (214/214)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12, nucl 10, cyto 10, extr 6, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0204960)
HIX0030843
HIT000201992 (
NM_005290
)
(G-protein coupled receptor 15; Brother of Bonzo; BoB;)
genome : 98,250,743 - 98,251,994 (1,252)
query : 1 - 1,252 (1,252/1,252)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030843)
HIX0030843
HIT000112475 (
ENST00000284311
)
(G-protein coupled receptor 15; Brother of Bonzo; BoB;)
genome : 98,250,743 - 98,251,960 (1,218)
query : 1 - 1,218 (1,218/1,218)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030843)
HIX0030843
HIT000432241
(
AK313375
)
(G-protein coupled receptor 15; Brother of Bonzo; BoB;)
genome : 98,250,743 - 98,251,960 (1,218)
query : 1 - 1,218 (1,218/1,218)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030843)
HIX0030843
HIT000398695
(
U34806
)
Representative transcript
(G-protein coupled receptor 15; Brother of Bonzo; BoB;)
genome : 98,250,796 - 98,252,026 (1,231)
query : 1 - 1,231 (1,231/1,232)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030843)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : AF084228
Macaca
sp. (Macaque) : AF291670
Oryzias
sp. (Medaka) : ENSORLT00000018574
Rattus
sp. (Rat) : XM_001059659
Equus
sp. (Horse) : XM_001503565
Gallus
sp. (Chicken) : XM_425528
Canis
sp. (Dog) : XM_545069
Bos
sp. (Cow) : XM_582381
HIX0030843
HIT000337127
(
BC101779
)
(G-protein coupled receptor 15; Brother of Bonzo; BoB;)
genome : 98,250,852 - 98,251,994 (1,143)
query : 1 - 1,143 (1,143/1,143)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030843)
HIX0030843
HIT000337129
(
BC101781
)
(G-protein coupled receptor 15; Brother of Bonzo; BoB;)
genome : 98,250,855 - 98,251,994 (1,140)
query : 1 - 1,140 (1,140/1,140)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030843)
HIX0030843
HIT000263588
(
BC069437
)
(G-protein coupled receptor 15; Brother of Bonzo; BoB;)
genome : 98,250,878 - 98,251,960 (1,083)
query : 1 - 1,083 (1,083/1,083)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030843)
HIX0215343
HIT000197148 (
NM_000097
)
(Coproporphyrinogen-III oxidase, mitochondrial; COX; Coprogen oxidase; Coproporphyrinogenase; EC=1.3.3.3; Precursor;)
genome : 98,298,291 - 98,312,455 (14,165)
query : 1 - 2,708 (2,708/2,728)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.3.3.3
KEGG pathway :
00860 : Porphyrin and chlorophyll metabolism (72)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 11, nucl 9.5, cyto_nucl 7.5, plas 5, cyto 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215343)
HIX0215343
HIT000050822
(
BC023551
)
Representative transcript
(Coproporphyrinogen-III oxidase, mitochondrial; COX; Coprogen oxidase; Coproporphyrinogenase; EC=1.3.3.3; Precursor;)
genome : 98,298,291 - 98,312,441 (14,151)
query : 1 - 2,700 (2,700/2,720)
7 exons
identity = 0.997
3'(0.994;1.000;0.995;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.3.3.3
KEGG pathway :
00860 : Porphyrin and chlorophyll metabolism (72)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR001260 : Coproporphyrinogen III oxidase, aerobic
IPR018375 : Coproporphyrinogen III oxidase, conserved site
GO :
0004109 : Molecular Function : coproporphyrinogen oxidase activity
0006779 : Biological Process : porphyrin-containing compound biosynthetic process
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 11, nucl 9.5, cyto_nucl 7.5, plas 5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215343)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : BC107664
Danio
sp. (Zebrafish) : BC124459
Gallus
sp. (Chicken) : CR354187
Mus
sp. (Mouse) : D16333
Oryzias
sp. (Medaka) : ENSORLT00000007039
Pongo
sp. (Orangutan) : ENSPPYT00000015824
Tetraodon
sp. (Tetraodon) : GSTENT00028915001
Takifugu
sp. (Fugu) : SINFRUT00000133100
Macaca
sp. (Macaque) : XM_001088605
Monodelphis
sp. (Opossum) : XM_001380593
Equus
sp. (Horse) : XM_001502304
Canis
sp. (Dog) : XM_545070
Bos
sp. (Cow) : XM_592923
HIX0215343
HIT000037878
(
BC017210
)
(Coproporphyrinogen-III oxidase, mitochondrial; COX; Coprogen oxidase; Coproporphyrinogenase; EC=1.3.3.3; Precursor;)
genome : 98,298,294 - 98,312,406 (14,113)
query : 1 - 2,663 (2,663/2,682)
7 exons
identity = 0.997
3'(0.995;1.000;0.995;0.993;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.3.3.3
KEGG pathway :
00860 : Porphyrin and chlorophyll metabolism (72)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR001260 : Coproporphyrinogen III oxidase, aerobic
IPR018375 : Coproporphyrinogen III oxidase, conserved site
GO :
0004109 : Molecular Function : coproporphyrinogen oxidase activity
0006779 : Biological Process : porphyrin-containing compound biosynthetic process
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 11, nucl 9.5, cyto_nucl 7.5, plas 5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215343)
HIX0215343
HIT000050825
(
BC023554
)
(Coproporphyrinogen-III oxidase, mitochondrial; COX; Coprogen oxidase; Coproporphyrinogenase; EC=1.3.3.3; Precursor;)
genome : 98,298,294 - 98,312,402 (14,109)
query : 1 - 2,658 (2,658/2,675)
7 exons
identity = 0.997
3'(0.994;1.000;1.000;0.993;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.3.3.3
KEGG pathway :
00860 : Porphyrin and chlorophyll metabolism (72)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR001260 : Coproporphyrinogen III oxidase, aerobic
IPR018375 : Coproporphyrinogen III oxidase, conserved site
GO :
0004109 : Molecular Function : coproporphyrinogen oxidase activity
0006779 : Biological Process : porphyrin-containing compound biosynthetic process
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 11, nucl 9.5, cyto_nucl 7.5, plas 5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215343)
HIX0215343
HIT000057621
(
BX648974
)
(Coproporphyrinogen-III oxidase, mitochondrial; COX; Coprogen oxidase; Coproporphyrinogenase; EC=1.3.3.3; Precursor;)
genome : 98,298,297 - 98,301,039 (2,743)
query : 1 - 2,106 (2,106/2,123)
2 exons
identity = 0.998
3'(0.997;1.000)5'
coverage = 1.000
EC number :
EC 1.3.3.3
KEGG pathway :
00860 : Porphyrin and chlorophyll metabolism (72)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR001260 : Coproporphyrinogen III oxidase, aerobic
GO :
0004109 : Molecular Function : coproporphyrinogen oxidase activity
0006779 : Biological Process : porphyrin-containing compound biosynthetic process
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, nucl 12.5, cyto 11.5, extr 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215343)
HIX0215343
HIT000109219 (
ENST00000264193
)
(Coproporphyrinogen-III oxidase, mitochondrial; COX; Coprogen oxidase; Coproporphyrinogenase; EC=1.3.3.3; Precursor;)
genome : 98,298,286 - 98,312,567 (14,282)
query : 1 - 2,825 (2,825/2,825)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.3.3.3
KEGG pathway :
00860 : Porphyrin and chlorophyll metabolism (72)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 11, nucl 9.5, cyto_nucl 7.5, plas 5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215343)
HIX0215343
HIT000326841
(
Z28409
)
(Coproporphyrinogen-III oxidase, mitochondrial; COX; Coprogen oxidase; Coproporphyrinogenase; EC=1.3.3.3; Precursor;)
genome : 98,298,287 - 98,312,048 (13,762)
query : 1 - 2,307 (2,307/2,307)
7 exons
identity = 0.990
3'(0.984;1.000;0.995;0.993;0.991;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.3.3.3
KEGG pathway :
00860 : Porphyrin and chlorophyll metabolism (72)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR001260 : Coproporphyrinogen III oxidase, aerobic
IPR018375 : Coproporphyrinogen III oxidase, conserved site
GO :
0004109 : Molecular Function : coproporphyrinogen oxidase activity
0006779 : Biological Process : porphyrin-containing compound biosynthetic process
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215343)
HIX0215343
HIT000100609
(
D16611
)
(Coproporphyrinogen-III oxidase, mitochondrial; COX; Coprogen oxidase; Coproporphyrinogenase; EC=1.3.3.3; Precursor;)
genome : 98,298,355 - 98,312,132 (13,778)
query : 10 - 2,332 (2,323/2,333)
7 exons
identity = 0.991
3'(0.983;1.000;0.995;1.000;1.000;1.000;1.000)5'
coverage = 0.996
EC number :
EC 1.3.3.3
KEGG pathway :
00860 : Porphyrin and chlorophyll metabolism (72)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR001260 : Coproporphyrinogen III oxidase, aerobic
IPR018375 : Coproporphyrinogen III oxidase, conserved site
GO :
0004109 : Molecular Function : coproporphyrinogen oxidase activity
0006779 : Biological Process : porphyrin-containing compound biosynthetic process
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10, E.R. 6, extr_plas 6, cyto_pero 4.5,
mito_pero 4.33333, pero 4, E.R._golg 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215343)
HIX0215343
HIT000331261
(
AK223481
)
(Coproporphyrinogen-III oxidase, mitochondrial; COX; Coprogen oxidase; Coproporphyrinogenase; EC=1.3.3.3; Precursor;)
genome : 98,299,214 - 98,312,385 (13,172)
query : 1 - 1,715 (1,715/1,715)
7 exons
identity = 0.999
3'(1.000;1.000;1.000;0.993;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.3.3.3
KEGG pathway :
00860 : Porphyrin and chlorophyll metabolism (72)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR001260 : Coproporphyrinogen III oxidase, aerobic
IPR018375 : Coproporphyrinogen III oxidase, conserved site
GO :
0004109 : Molecular Function : coproporphyrinogen oxidase activity
0006779 : Biological Process : porphyrin-containing compound biosynthetic process
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 11, nucl 9.5, cyto_nucl 7.5, plas 5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215343)
HIX0215343
HIT000422937
(
AK290140
)
(Coproporphyrinogen-III oxidase, mitochondrial; COX; Coprogen oxidase; Coproporphyrinogenase; EC=1.3.3.3; Precursor;)
genome : 98,299,215 - 98,312,455 (13,241)
query : 1 - 1,784 (1,784/1,784)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.3.3.3
KEGG pathway :
00860 : Porphyrin and chlorophyll metabolism (72)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR001260 : Coproporphyrinogen III oxidase, aerobic
IPR018375 : Coproporphyrinogen III oxidase, conserved site
GO :
0004109 : Molecular Function : coproporphyrinogen oxidase activity
0006779 : Biological Process : porphyrin-containing compound biosynthetic process
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 11, nucl 9.5, cyto_nucl 7.5, plas 5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215343)
HIX0215343
HIT000610277 (
ENST00000510489
)
(Coproporphyrinogen-III oxidase; COX; Coprogen oxidase; Coproporphyrinogenase; EC=1.3.3.3;)
genome : 98,300,252 - 98,304,706 (4,455)
query : 1 - 526 (526/526)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.3.3.3
KEGG pathway :
00860 : Porphyrin and chlorophyll metabolism (72)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 12, cyto_nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215343)
HIX0200582
HIT000005429
(
AK022155
)
Representative transcript
(Hypothetical short protein.)
genome : 98,301,355 - 98,303,174 (1,820)
query : 1 - 1,820 (1,820/1,820)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 9, mito 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200582)
HIX0215343
HIT000613228 (
ENST00000513674
)
(Coproporphyrinogen-III oxidase, mitochondrial; COX; Coprogen oxidase; Coproporphyrinogenase; EC=1.3.3.3; Precursor;)
genome : 98,308,506 - 98,312,492 (3,987)
query : 1 - 826 (826/826)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.3.3.3
KEGG pathway :
00860 : Porphyrin and chlorophyll metabolism (72)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 16, plas 5, nucl 4, cyto 4, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215343)
HIX0215343
HIT000494316
(
AK299692
)
(Coproporphyrinogen-III oxidase, mitochondrial; COX; Coprogen oxidase; Coproporphyrinogenase; EC=1.3.3.3; Precursor;)
genome : 98,309,363 - 98,312,454 (3,092)
query : 4 - 1,033 (1,030/1,033)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.997
EC number :
EC 1.3.3.3
KEGG pathway :
00860 : Porphyrin and chlorophyll metabolism (72)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR001260 : Coproporphyrinogen III oxidase, aerobic
GO :
0004109 : Molecular Function : coproporphyrinogen oxidase activity
0006779 : Biological Process : porphyrin-containing compound biosynthetic process
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 12, nucl 8.5, cyto_nucl 7.5, cyto 5.5, plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215343)
HIX0215343
HIT000614501 (
ENST00000515041
)
(Coproporphyrinogen-III oxidase, mitochondrial; COX; Coprogen oxidase; Coproporphyrinogenase; EC=1.3.3.3; Precursor;)
genome : 98,309,363 - 98,312,454 (3,092)
query : 1 - 1,030 (1,030/1,030)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.3.3.3
KEGG pathway :
00860 : Porphyrin and chlorophyll metabolism (72)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 12, nucl 8.5, cyto_nucl 7.5, cyto 5.5, plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215343)
HIX0204566
HIT000569720 (
ENST00000465006
)
(Ribosomal protein L19/L19e, domain 3 containing protein.)
genome : 98,338,909 - 98,339,462 (554)
query : 1 - 554 (554/554)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0204566)
HIX0204353
HIT000571253_01 (
ENST00000466609
)
(HECT domain containing protein.)
genome : 98,376,646 - 98,379,414 (2,769)
query : 1 - 2,769 (2,769/2,769)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14, nucl 7, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0204353)
HIX0204353
HIT000621305_01 (
ENST00000521997
)
(HECT domain containing protein.)
genome : 98,378,321 - 98,378,941 (621)
query : 21 - 641 (621/641)
1 exon
identity = 0.971
5'(0.971)3'
coverage = 0.969
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 14, mito 5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0204353)
HIX0204342
HIT000591792 (
ENST00000488132
)
(Conserved hypothetical protein.)
genome : 98,433,174 - 98,451,492 (18,319)
query : 1 - 769 (769/769)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 10.5, cyto_plas 10, mito 7, extr 4,
mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0204342)
HIX0204342
HIT000580039 (
ENST00000475816
)
(Hypothetical short protein.)
genome : 98,433,176 - 98,451,352 (18,177)
query : 1 - 524 (524/524)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 10.5, cyto_plas 10, mito 7, extr 4,
mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0204342)
HIX0204342
HIT000726819 (
NR_046683
)
(Hypothetical short protein.)
genome : 98,433,177 - 98,451,495 (18,319)
query : 1 - 769 (769/769)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 10.5, cyto_plas 10, mito 7, extr 4,
mito_pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0204342)
HIX0204342
HIT000566792 (
ENST00000461931
)
(Hypothetical short protein.)
genome : 98,434,149 - 98,451,495 (17,347)
query : 1 - 669 (669/669)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 10.5, cyto_plas 10, mito 7, extr 4,
mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0204342)
HIX0003493
HIT000724906 (
NM_001271142
)
(Type 2 lactosamine alpha-2,3-sialyltransferase isoform 2.)
genome : 98,451,080 - 98,514,689 (63,610)
query : 1 - 3,458 (3,458/3,458)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.99.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 16.5, mito 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003493)
HIX0003493
HIT000724908 (
NM_001271146
)
(Type 2 lactosamine alpha-2,3-sialyltransferase; EC=2.4.99.-; CMP-NeuAc:beta-galactoside alpha-2,3-sialyltransferase VI; ST3Gal VI; ST3GalVI; Sialyltransferase 10;)
genome : 98,451,080 - 98,514,689 (63,610)
query : 1 - 3,388 (3,388/3,388)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.99.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 14.5, E.R._golg 10.5, extr 10, golg 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003493)
HIX0003493
HIT000724909 (
NM_001271147
)
(Type 2 lactosamine alpha-2,3-sialyltransferase isoform 4.)
genome : 98,451,080 - 98,514,689 (63,610)
query : 1 - 3,362 (3,362/3,362)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.99.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 16.5, mito 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003493)
HIX0003493
HIT000724910 (
NM_001271148
)
(Type 2 lactosamine alpha-2,3-sialyltransferase isoform 5.)
genome : 98,451,080 - 98,514,689 (63,610)
query : 1 - 3,146 (3,146/3,146)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.99.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27.5, cyto_nucl 14.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003493)
HIX0003493
HIT000592727 (
ENST00000489112
)
(Type 2 lactosamine alpha-2,3-sialyltransferase; EC=2.4.99.-; CMP-NeuAc:beta-galactoside alpha-2,3-sialyltransferase VI; ST3Gal VI; ST3GalVI; Sialyltransferase 10;)
genome : 98,451,080 - 98,491,813 (40,734)
query : 1 - 804 (804/804)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.99.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003493)
HIX0003493
HIT000587780 (
ENST00000483910
)
(Type 2 lactosamine alpha-2,3-sialyltransferase; EC=2.4.99.-; CMP-NeuAc:beta-galactoside alpha-2,3-sialyltransferase VI; ST3Gal VI; ST3GalVI; Sialyltransferase 10;)
genome : 98,451,099 - 98,513,206 (62,108)
query : 1 - 1,886 (1,886/1,886)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.99.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 14.5, E.R._golg 10.5, extr 10, golg 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003493)
HIX0003493
HIT000565690 (
ENST00000460774
)
(Type 2 lactosamine alpha-2,3-sialyltransferase; EC=2.4.99.-; CMP-NeuAc:beta-galactoside alpha-2,3-sialyltransferase VI; ST3Gal VI; ST3GalVI; Sialyltransferase 10;)
genome : 98,451,109 - 98,503,820 (52,712)
query : 1 - 582 (582/582)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.99.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003493)
HIX0003493
HIT000573641 (
ENST00000469105
)
(Type 2 lactosamine alpha-2,3-sialyltransferase isoform 2.)
genome : 98,451,110 - 98,514,098 (62,989)
query : 1 - 2,837 (2,837/2,837)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.99.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 16.5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003493)
HIX0003493
HIT000058758
(
AB022918
)
(Type 2 lactosamine alpha-2,3-sialyltransferase; EC=2.4.99.-; CMP-NeuAc:beta-galactoside alpha-2,3-sialyltransferase VI; ST3Gal VI; ST3GalVI; Sialyltransferase 10;)
genome : 98,451,130 - 98,512,806 (61,677)
query : 1 - 1,454 (1,454/1,469)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.997)3'
coverage = 1.000
EC number :
EC 2.4.99.-
InterPro :
IPR001675 : Glycosyl transferase, family 29
GO :
0006486 : Biological Process : protein glycosylation
0008373 : Molecular Function : sialyltransferase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 14.5, E.R._golg 10.5, extr 10, golg 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003493)
HIX0003493
HIT000085979
(
BC001266
)
Representative transcript
(Type 2 lactosamine alpha-2,3-sialyltransferase isoform 2.)
genome : 98,451,152 - 98,513,337 (62,186)
query : 1 - 2,033 (2,033/2,047)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.998)3'
coverage = 1.000
EC number :
EC 2.4.99.-
InterPro :
IPR001675 : Glycosyl transferase, family 29
GO :
0006486 : Biological Process : protein glycosylation
0008373 : Molecular Function : sialyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 16.5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003493)
HIX0003493
HIT000571132 (
ENST00000466482
)
(Type 2 lactosamine alpha-2,3-sialyltransferase; EC=2.4.99.-; CMP-NeuAc:beta-galactoside alpha-2,3-sialyltransferase VI; ST3Gal VI; ST3GalVI; Sialyltransferase 10;)
genome : 98,451,213 - 98,501,761 (50,549)
query : 1 - 540 (540/540)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.99.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, nucl 7.5, cyto_nucl 7.5, E.R._mito 7.5,
mito_pero 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003493)
HIX0003493
HIT000567001 (
ENST00000462152
)
(Type 2 lactosamine alpha-2,3-sialyltransferase isoform 5.)
genome : 98,451,223 - 98,512,788 (61,566)
query : 1 - 1,102 (1,102/1,102)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.99.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27.5, cyto_nucl 14.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003493)
HIX0003493
HIT000004396
(
AK001922
)
(Type 2 lactosamine alpha-2,3-sialyltransferase; EC=2.4.99.-; CMP-NeuAc:beta-galactoside alpha-2,3-sialyltransferase VI; ST3Gal VI; ST3GalVI; Sialyltransferase 10;)
genome : 98,451,294 - 98,514,689 (63,396)
query : 2 - 3,149 (3,148/3,149)
10 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.993;0.998)3'
coverage = 1.000
EC number :
EC 2.4.99.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31.5, extr_plas 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003493)
HIX0003493
HIT000109623 (
ENST00000265261
)
(Type 2 lactosamine alpha-2,3-sialyltransferase isoform 4.)
genome : 98,451,294 - 98,514,689 (63,396)
query : 1 - 3,148 (3,148/3,148)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.99.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 16.5, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003493)
HIX0003493
HIT000590011 (
ENST00000486249
)
(Type 2 lactosamine alpha-2,3-sialyltransferase isoform 4.)
genome : 98,451,294 - 98,514,689 (63,396)
query : 1 - 3,148 (3,148/3,148)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.99.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 16.5, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003493)
HIX0003493
HIT000600303 (
ENST00000497008
)
(Type 2 lactosamine alpha-2,3-sialyltransferase isoform 4.)
genome : 98,451,319 - 98,507,039 (55,721)
query : 1 - 564 (564/564)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.99.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003493)
HIX0003493
HIT000087783
(
BC012092
)
(Type 2 lactosamine alpha-2,3-sialyltransferase isoform 3.)
genome : 98,451,339 - 98,514,095 (62,757)
query : 1 - 2,606 (2,606/2,650)
11 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.984;1.000;1.000;0.995)3'
coverage = 1.000
EC number :
EC 2.4.99.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31.5, extr_plas 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003493)
HIX0003493
HIT000590094 (
ENST00000486334
)
(Type 2 lactosamine alpha-2,3-sialyltransferase; EC=2.4.99.-; CMP-NeuAc:beta-galactoside alpha-2,3-sialyltransferase VI; ST3Gal VI; ST3GalVI; Sialyltransferase 10;)
genome : 98,451,535 - 98,507,246 (55,712)
query : 1 - 750 (750/750)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.4.99.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, E.R. 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003493)
HIX0003493
HIT000202723 (
NM_006100
)
(Type 2 lactosamine alpha-2,3-sialyltransferase; EC=2.4.99.-; CMP-NeuAc:beta-galactoside alpha-2,3-sialyltransferase VI; ST3Gal VI; ST3GalVI; Sialyltransferase 10;)
genome : 98,451,548 - 98,514,689 (63,142)
query : 1 - 3,571 (3,571/3,571)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.99.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 14.5, E.R._golg 10.5, extr 10, golg 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003493)
HIX0003493
HIT000724907 (
NM_001271145
)
(Type 2 lactosamine alpha-2,3-sialyltransferase; EC=2.4.99.-; CMP-NeuAc:beta-galactoside alpha-2,3-sialyltransferase VI; ST3Gal VI; ST3GalVI; Sialyltransferase 10;)
genome : 98,451,548 - 98,514,689 (63,142)
query : 1 - 3,399 (3,399/3,399)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.99.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 13, cyto_nucl 9, plas 6, mito 5.5, mito_pero 4,
nucl 3, extr_plas 3, cysk_plas 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003493)
HIX0003493
HIT000600886 (
ENST00000497621
)
(Type 2 lactosamine alpha-2,3-sialyltransferase; EC=2.4.99.-; CMP-NeuAc:beta-galactoside alpha-2,3-sialyltransferase VI; ST3Gal VI; ST3GalVI; Sialyltransferase 10;)
genome : 98,451,558 - 98,513,237 (61,680)
query : 1 - 2,109 (2,109/2,109)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.99.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 14.5, E.R._golg 10.5, extr 10, golg 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003493)
HIX0003493
HIT000433977
(
AK315111
)
(Type 2 lactosamine alpha-2,3-sialyltransferase; EC=2.4.99.-; CMP-NeuAc:beta-galactoside alpha-2,3-sialyltransferase VI; ST3Gal VI; ST3GalVI; Sialyltransferase 10;)
genome : 98,451,558 - 98,512,605 (61,048)
query : 1 - 1,478 (1,478/1,478)
11 exons
identity = 0.998
5'(0.993;1.000;1.000;1.000;1.000;1.000;1.000;
0.995;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.99.-
InterPro :
IPR001675 : Glycosyl transferase, family 29
GO :
0006486 : Biological Process : protein glycosylation
0008373 : Molecular Function : sialyltransferase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 14.5, E.R._golg 10.5, extr 10, golg 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003493)
HIX0003493
HIT000584166 (
ENST00000480133
)
(Type 2 lactosamine alpha-2,3-sialyltransferase isoform 3.)
genome : 98,451,558 - 98,489,784 (38,227)
query : 1 - 360 (360/360)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.99.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, extr 11, nucl 11, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003493)
HIX0003493
HIT000070204
(
AF119391
)
(Type 2 lactosamine alpha-2,3-sialyltransferase; EC=2.4.99.-; CMP-NeuAc:beta-galactoside alpha-2,3-sialyltransferase VI; ST3Gal VI; ST3GalVI; Sialyltransferase 10;)
genome : 98,451,565 - 98,512,833 (61,269)
query : 1 - 1,525 (1,525/1,556)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.994)3'
coverage = 1.000
EC number :
EC 2.4.99.-
InterPro :
IPR001675 : Glycosyl transferase, family 29
GO :
0006486 : Biological Process : protein glycosylation
0008373 : Molecular Function : sialyltransferase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 13, cyto_nucl 9, plas 6, mito 5.5, mito_pero 4,
nucl 3, extr_plas 3, cysk_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003493)
HIX0003493
HIT000050795
(
BC023312
)
(Type 2 lactosamine alpha-2,3-sialyltransferase; EC=2.4.99.-; CMP-NeuAc:beta-galactoside alpha-2,3-sialyltransferase VI; ST3Gal VI; ST3GalVI; Sialyltransferase 10;)
genome : 98,451,572 - 98,513,235 (61,664)
query : 1 - 2,093 (2,093/2,107)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 2.4.99.-
InterPro :
IPR001675 : Glycosyl transferase, family 29
GO :
0006486 : Biological Process : protein glycosylation
0008373 : Molecular Function : sialyltransferase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 14.5, E.R._golg 10.5, extr 10, golg 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003493)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ585767
Pan
sp. (Chimpanzee) : AJ744808
Oryzias
sp. (Medaka) : AJ871411
Mus
sp. (Mouse) : AK162619
Rattus
sp. (Rat) : BC092560
Danio
sp. (Zebrafish) : BC124750
Bos
sp. (Cow) : BC133294
Pongo
sp. (Orangutan) : CR857649
Monodelphis
sp. (Opossum) : ENSMODT00000002949
Macaca
sp. (Macaque) : XM_001089741
Equus
sp. (Horse) : XM_001503556
Canis
sp. (Dog) : XM_843258
HIX0003493
HIT000477581 (
ENST00000394162
)
(Type 2 lactosamine alpha-2,3-sialyltransferase; EC=2.4.99.-; CMP-NeuAc:beta-galactoside alpha-2,3-sialyltransferase VI; ST3Gal VI; ST3GalVI; Sialyltransferase 10;)
genome : 98,451,572 - 98,513,234 (61,663)
query : 1 - 2,092 (2,092/2,092)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.99.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 14.5, E.R._golg 10.5, extr 10, golg 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003493)
HIX0003493
HIT000569719 (
ENST00000465004
)
(Hypothetical short protein.)
genome : 98,452,300 - 98,475,390 (23,091)
query : 1 - 314 (314/314)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 9.5, cyto_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003493)
HIX0003493
HIT000581008 (
ENST00000476833
)
(Type 2 lactosamine alpha-2,3-sialyltransferase; EC=2.4.99.-; CMP-NeuAc:beta-galactoside alpha-2,3-sialyltransferase VI; ST3Gal VI; ST3GalVI; Sialyltransferase 10;)
genome : 98,482,153 - 98,501,344 (19,192)
query : 1 - 833 (833/833)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.99.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003493)
HIX0003493
HIT000573114 (
ENST00000468553
)
(Type 2 lactosamine alpha-2,3-sialyltransferase; EC=2.4.99.-; CMP-NeuAc:beta-galactoside alpha-2,3-sialyltransferase VI; ST3Gal VI; ST3GalVI; Sialyltransferase 10;)
genome : 98,482,161 - 98,501,304 (19,144)
query : 1 - 715 (715/715)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.99.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 23, nucl 3, E.R. 2, cyto_mito 2, cyto 1.5,
mito 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003493)
HIX0003493
HIT000594231 (
ENST00000490684
)
(Type 2 lactosamine alpha-2,3-sialyltransferase; EC=2.4.99.-; CMP-NeuAc:beta-galactoside alpha-2,3-sialyltransferase VI; ST3Gal VI; ST3GalVI; Sialyltransferase 10;)
genome : 98,482,165 - 98,491,949 (9,785)
query : 1 - 582 (582/582)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.99.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 21, extr 3, cyto 2.5, cyto_mito 2.5, nucl 2,
E.R. 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003493)
HIX0003493
HIT000589197 (
ENST00000485391
)
(Type 2 lactosamine alpha-2,3-sialyltransferase isoform 4.)
genome : 98,482,184 - 98,507,303 (25,120)
query : 1 - 767 (767/767)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.99.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, E.R. 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003493)
HIX0003493
HIT000598743 (
ENST00000495376
)
(Type 2 lactosamine alpha-2,3-sialyltransferase; EC=2.4.99.-; CMP-NeuAc:beta-galactoside alpha-2,3-sialyltransferase VI; ST3Gal VI; ST3GalVI; Sialyltransferase 10;)
genome : 98,482,192 - 98,502,583 (20,392)
query : 1 - 685 (685/685)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.99.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31.5, extr_plas 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003493)
HIX0003493
HIT000595745 (
ENST00000492254
)
(Type 2 lactosamine alpha-2,3-sialyltransferase; EC=2.4.99.-; CMP-NeuAc:beta-galactoside alpha-2,3-sialyltransferase VI; ST3Gal VI; ST3GalVI; Sialyltransferase 10;)
genome : 98,482,197 - 98,507,270 (25,074)
query : 1 - 809 (809/809)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.4.99.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, nucl 3, cyto 2.5, cyto_mito 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003493)
HIX0003493
HIT000581716 (
ENST00000477574
)
(Type 2 lactosamine alpha-2,3-sialyltransferase isoform 2.)
genome : 98,489,233 - 98,506,916 (17,684)
query : 1 - 489 (489/489)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.99.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003493)
HIX0003493
HIT000588968 (
ENST00000485145
)
(Type 2 lactosamine alpha-2,3-sialyltransferase isoform 2.)
genome : 98,489,899 - 98,507,282 (17,384)
query : 1 - 700 (700/700)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.99.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 14.5, mito 8, nucl 4.5,
mito_pero 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003493)
HIX0003493
HIT000578876 (
ENST00000474595
)
(Type 2 lactosamine alpha-2,3-sialyltransferase; EC=2.4.99.-; CMP-NeuAc:beta-galactoside alpha-2,3-sialyltransferase VI; ST3Gal VI; ST3GalVI; Sialyltransferase 10;)
genome : 98,491,086 - 98,512,609 (21,524)
query : 1 - 525 (525/525)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.99.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 11, cysk 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003493)
HIX0003493
HIT000604554 (
ENST00000504327
)
(Conserved hypothetical protein.)
genome : 98,501,032 - 98,502,037 (1,006)
query : 1 - 1,006 (1,006/1,006)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, mito_nucl 13.6667, cyto_nucl 5.66667, nucl 5,
cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003493)
HIX0003493
HIT000582023 (
ENST00000477899
)
(Type 2 lactosamine alpha-2,3-sialyltransferase; EC=2.4.99.-; CMP-NeuAc:beta-galactoside alpha-2,3-sialyltransferase VI; ST3Gal VI; ST3GalVI; Sialyltransferase 10;)
genome : 98,502,355 - 98,510,837 (8,483)
query : 1 - 803 (803/803)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.99.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27.5, cyto_nucl 14.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003493)
HIX0003493
HIT000597370 (
ENST00000493953
)
(Type 2 lactosamine alpha-2,3-sialyltransferase isoform 5.)
genome : 98,503,274 - 98,510,841 (7,568)
query : 1 - 697 (697/697)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.99.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, mito 10, cyto_pero 10, cyto_plas 10,
cyto_golg 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003493)
HIX0003493
HIT000595423 (
ENST00000491912
)
(Type 2 lactosamine alpha-2,3-sialyltransferase; EC=2.4.99.-; CMP-NeuAc:beta-galactoside alpha-2,3-sialyltransferase VI; ST3Gal VI; ST3GalVI; Sialyltransferase 10;)
genome : 98,510,703 - 98,539,826 (29,124)
query : 1 - 644 (644/659)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.99.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 12, mito 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003493)
HIX0003494
HIT000124743 (
ENST00000326840
)
(Discoidin, CUB and LCCL domain-containing protein 2; CUB, LCCL and coagulation factor V/VIII-homology domains protein 1; Endothelial and smooth muscle cell-derived neuropilin-like protein; Precursor;)
genome : 98,514,785 - 98,620,533 (105,749)
query : 1 - 6,122 (6,122/6,122)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 19, extr 3, golg 3, E.R. 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003494)
HIX0003494
HIT000089078
(
BC016815
)
(Hypothetical short protein.)
genome : 98,514,828 - 98,515,629 (802)
query : 4 - 809 (806/840)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto_nucl 4, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003494)
HIX0003494
HIT000069419
(
AF104313
)
(Conserved hypothetical protein.)
genome : 98,514,821 - 98,517,451 (2,631)
query : 1 - 2,632 (2,632/2,652)
1 exon
identity = 0.991
3'(0.991)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 5, nucl 3, cyto_mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003494)
HIX0003494
HIT000061214
(
AB073146
)
(Discoidin, CUB and LCCL domain-containing protein 2; CUB, LCCL and coagulation factor V/VIII-homology domains protein 1; Endothelial and smooth muscle cell-derived neuropilin-like protein; Precursor;)
genome : 98,514,814 - 98,620,533 (105,720)
query : 1 - 6,093 (6,093/6,093)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.998)5'
coverage = 1.000
InterPro :
IPR000421 : Coagulation factor 5/8 C-terminal type domain
IPR000859 : CUB domain
IPR004043 : LCCL domain
IPR008979 : Galactose-binding domain-like
GO :
0007155 : Biological Process : cell adhesion
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 19, nucl 3, golg 3, extr 2, mito 2, E.R._golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003494)
HIX0003494
HIT000212008 (
NM_080927
)
(Discoidin, CUB and LCCL domain-containing protein 2; CUB, LCCL and coagulation factor V/VIII-homology domains protein 1; Endothelial and smooth muscle cell-derived neuropilin-like protein; Precursor;)
genome : 98,514,814 - 98,620,533 (105,720)
query : 1 - 6,093 (6,093/6,093)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 19, extr 3, golg 3, E.R. 2, pero 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003494)
HIX0057251
HIT000003836
(
AK001362
)
Representative transcript
(Hypothetical protein.)
genome : 98,514,822 - 98,517,908 (3,087)
query : 1 - 3,086 (3,086/3,086)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057251)
HIX0003494
HIT000040856
(
BC029658
)
(Discoidin, CUB and LCCL domain-containing protein 2 precursor.)
genome : 98,516,627 - 98,620,044 (103,418)
query : 7 - 3,843 (3,837/3,858)
16 exons
identity = 0.998
3'(0.999;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.938)5'
coverage = 0.998
InterPro :
IPR000421 : Coagulation factor 5/8 C-terminal type domain
IPR000859 : CUB domain
IPR004043 : LCCL domain
IPR008979 : Galactose-binding domain-like
GO :
0007155 : Biological Process : cell adhesion
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 14, E.R. 13, extr_plas 10, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003494)
HIX0003494
HIT000124751 (
ENST00000326857
)
(Discoidin, CUB and LCCL domain-containing protein 2; CUB, LCCL and coagulation factor V/VIII-homology domains protein 1; Endothelial and smooth muscle cell-derived neuropilin-like protein; Precursor;)
genome : 98,516,627 - 98,620,170 (103,544)
query : 1 - 3,959 (3,959/3,959)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 18, extr 3, golg 3, mito 2, E.R. 2, pero 2,
E.R._mito 2, mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003494)
HIX0003494
HIT000078760
(
AF387547
)
Representative transcript
(Discoidin, CUB and LCCL domain-containing protein 2; CUB, LCCL and coagulation factor V/VIII-homology domains protein 1; Endothelial and smooth muscle cell-derived neuropilin-like protein; Precursor;)
genome : 98,517,616 - 98,620,181 (102,566)
query : 1 - 2,939 (2,939/2,939)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.993;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000421 : Coagulation factor 5/8 C-terminal type domain
IPR000859 : CUB domain
IPR004043 : LCCL domain
IPR008979 : Galactose-binding domain-like
GO :
0007155 : Biological Process : cell adhesion
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 19, extr 3, golg 3, E.R. 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003494)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AF387549
Gallus
sp. (Chicken) : AJ851696
Mus
sp. (Mouse) : BC066097
Pongo
sp. (Orangutan) : ENSPPYT00000015822
Pan
sp. (Chimpanzee) : ENSPTRT00000028340
Tetraodon
sp. (Tetraodon) : GSTENT00004082001
Takifugu
sp. (Fugu) : SINFRUT00000166749
Monodelphis
sp. (Opossum) : XM_001371195
Equus
sp. (Horse) : XM_001917380
Canis
sp. (Dog) : XM_545071
Bos
sp. (Cow) : XM_602937
Macaca
sp. (Macaque) : XR_010687
HIX0003494
HIT000497273
(
AK302649
)
(Discoidin, CUB and LCCL domain-containing protein 2 precursor.)
genome : 98,518,161 - 98,620,012 (101,852)
query : 2 - 2,226 (2,225/2,226)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.993;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000421 : Coagulation factor 5/8 C-terminal type domain
IPR000859 : CUB domain
IPR004043 : LCCL domain
IPR008979 : Galactose-binding domain-like
GO :
0007155 : Biological Process : cell adhesion
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 11, cyto 5.5, E.R._golg 5.5, extr 5,
cyto_pero 4.83333, mito_pero 3.33333, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003494)
HIX0003494
HIT000600044 (
ENST00000496736
)
(Discoidin, CUB and LCCL domain-containing protein 2 precursor.)
genome : 98,519,420 - 98,520,815 (1,396)
query : 1 - 514 (514/516)
2 exons
identity = 0.998
3'(0.993;1.000)5'
coverage = 0.996
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 10, mito 9, nucl 4.5,
E.R._mito 4.5, mito_pero 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003494)
HIX0003493
HIT000598863 (
ENST00000495502
)
(Hypothetical protein.)
genome : 98,520,149 - 98,540,045 (19,897)
query : 1 - 634 (634/634)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, mito_nucl 13.5, nucl 9.5, cyto_nucl 7.66667,
E.R._mito 7.66667, mito_pero 7.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003493)
HIX0003494
HIT000598009 (
ENST00000494614
)
(Discoidin, CUB and LCCL domain-containing protein 2 precursor.)
genome : 98,520,227 - 98,531,328 (11,102)
query : 1 - 727 (727/727)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 13, E.R._mito 6.33333, mito 6, cyto_mito 6,
cyto 4.5, E.R. 3.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003494)
HIX0003494
HIT000055787
(
BX647140
)
(Discoidin, CUB and LCCL domain-containing protein 2 precursor.)
genome : 98,526,755 - 98,535,133 (8,379)
query : 1 - 4,436 (4,436/4,457)
4 exons
identity = 0.998
3'(1.000;1.000;1.000;0.998)5'
coverage = 1.000
InterPro :
IPR000421 : Coagulation factor 5/8 C-terminal type domain
IPR008979 : Galactose-binding domain-like
GO :
0007155 : Biological Process : cell adhesion
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 18, pero 7, mito_pero 6.83333, E.R._mito 5.16667,
mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003494)
HIX0003494
HIT000583223 (
ENST00000479144
)
(Discoidin, CUB and LCCL domain-containing protein 2 precursor.)
genome : 98,526,751 - 98,536,672 (9,922)
query : 1 - 692 (692/692)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 11, cyto 10, mito 7, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003494)
HIX0003494
HIT000574870 (
ENST00000470393
)
(Discoidin, CUB and LCCL domain-containing protein 2 precursor.)
genome : 98,526,755 - 98,535,133 (8,379)
query : 1 - 4,435 (4,435/4,435)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 18, pero 7, mito_pero 6.83333, E.R._mito 5.16667,
mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003494)
HIX0003494
HIT000012964
(
AK056350
)
(Discoidin, CUB and LCCL domain-containing protein 2 precursor.)
genome : 98,526,931 - 98,620,526 (93,596)
query : 1 - 2,020 (2,020/2,020)
13 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.992;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.996)5'
coverage = 1.000
InterPro :
IPR000421 : Coagulation factor 5/8 C-terminal type domain
IPR000859 : CUB domain
IPR004043 : LCCL domain
IPR008979 : Galactose-binding domain-like
GO :
0007155 : Biological Process : cell adhesion
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003494)
HIX0003494
HIT000101321
(
D29810
)
(Discoidin, CUB and LCCL domain-containing protein 2 precursor.)
genome : 98,530,038 - 98,600,611 (70,574)
query : 1 - 1,384 (1,384/1,388)
11 exons
identity = 0.981
3'(0.977;0.956;0.974;0.984;0.977;0.932;0.993;
0.986;0.981;0.986;1.000)5'
coverage = 0.997
InterPro :
IPR000421 : Coagulation factor 5/8 C-terminal type domain
IPR000859 : CUB domain
IPR004043 : LCCL domain
IPR008979 : Galactose-binding domain-like
GO :
0007155 : Biological Process : cell adhesion
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, nucl 7, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003494)
HIX0003494
HIT000564954 (
ENST00000460008
)
(Discoidin, CUB and LCCL domain-containing protein 2 precursor.)
genome : 98,531,175 - 98,538,186 (7,012)
query : 1 - 418 (418/418)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10.5, nucl 10, cyto 9, extr 6, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003494)
HIX0003494
HIT000574162 (
ENST00000469648
)
(Discoidin, CUB and LCCL domain-containing protein 2 precursor.)
genome : 98,541,153 - 98,619,833 (78,681)
query : 1 - 584 (584/584)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto_nucl 11, nucl 10, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003494)
HIX0003494
HIT000589781 (
ENST00000486004
)
(Discoidin, CUB and LCCL domain-containing protein 2 precursor.)
genome : 98,544,178 - 98,614,256 (70,079)
query : 1 - 582 (582/582)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto 10.5, cyto_nucl 8, nucl 4.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003494)
HIX0030933
HIT000070034
(
AF116699
)
Representative transcript
(Conserved hypothetical protein.)
genome : 98,549,626 - 98,589,539 (39,914)
query : 126 - 1,481 (1,356/1,481)
2 exons
identity = 0.961
5'(0.750;0.997)3'
coverage = 0.916
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030933)
HIX0003494
HIT000086746
(
BC007117
)
(Discoidin, CUB and LCCL domain-containing protein 2 precursor.)
genome : 98,568,232 - 98,620,015 (51,784)
query : 1 - 554 (554/586)
4 exons
identity = 0.998
3'(1.000;1.000;1.000;0.980)5'
coverage = 0.996
InterPro :
IPR000859 : CUB domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 14, nucl 11.5, mito 2, cysk 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003494)
HIX0003494
HIT000547416 (
ENST00000449482
)
(Discoidin, CUB and LCCL domain-containing protein 2; Endothelial and smooth muscle cell-derived neuropilin-like protein; Precursor;)
genome : 98,568,232 - 98,620,015 (51,784)
query : 1 - 554 (554/554)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18, cyto 17, nucl 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0003494)
HIX0204685
HIT000579075 (
ENST00000474798
)
(Hypothetical short protein.)
genome : 98,621,268 - 98,737,406 (116,139)
query : 1 - 395 (395/395)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 7, nucl 6, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0204685)
HIX0204666
HIT000578073 (
ENST00000473756
)
(Conserved hypothetical protein.)
genome : 98,699,902 - 98,701,940 (2,039)
query : 1 - 962 (962/962)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0204666)
HIX0204819
HIT000590709 (
ENST00000486987
)
(Conserved hypothetical protein.)
genome : 98,934,068 - 98,935,110 (1,043)
query : 1 - 1,043 (1,043/1,043)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 12, nucl 7.5, extr 5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0204819)
HIX0204504
HIT000564937 (
ENST00000459991
)
(Conserved hypothetical protein.)
genome : 99,045,221 - 99,045,396 (176)
query : 1 - 176 (176/176)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.1667, cyto 14.5, cyto_plas 9.5, nucl 8.5,
extr 4, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0204504)
HIX0215822
HIT000612522 (
ENST00000512905
)
(Conserved hypothetical protein.)
genome : 98,239,976 - 98,304,342 (64,367)
query : 1 - 593 (593/593)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215822)
AC110491.5
97500001-97663947 F -
NCBI
AC026100.19
97663948-97775848 F -
NCBI
AC024892.14
97775849-97805528 F -
NCBI
AC133439.2
97805529-97807513 F +
NCBI
AC117460.7
97807514-97989103 F -
NCBI
AC117473.3
97989104-98072732 F +
NCBI
AC108730.7
98072733-98155966 F -
NCBI
AC074274.15
98155967-98198501 F -
NCBI
AC021660.16
98198502-98361062 F -
NCBI
AC108737.6
98361063-98375732 F -
NCBI
AC016962.38
98375733-98423256 F -
NCBI
AC106728.6
98423257-98614875 F -
NCBI
AC026303.25
98614876-98647889 F -
NCBI
AC106704.7
98647890-98685174 F +
NCBI
AC091212.17
98685175-98762168 F +
NCBI
AC108678.3
98762169-98817778 F +
NCBI
AC092181.9
98817779-98998946 F -
NCBI
AC068767.16
98998947-99010050 F -
NCBI
AC107297.7
99010051-99062904 F +
NCBI
AC078828.12
99062905-99100000 F -
NCBI