Clickable map CGI

HIX0204366
HIT000577141_01 ( ENST00000472778 )
  (K Homology domain, type 1 containing protein.)
  genome : 96,068,212 - 96,069,043 (832)
  query : 36 - 822 (787/822)
  2 exons
  identity = 0.967
  5'(0.965;0.969)3'
  coverage = 0.957
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 13, cyto_nucl 9, extr 7, mito 7, nucl 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0204366)

HIX0204366
HIT000357561_02 ( ENST00000376281 )
  (ROK, N-terminal domain containing protein.)
  genome : 96,068,212 - 96,071,102 (2,891)
  query : 24 - 2,928 (2,905/2,928)
  1 exon
  identity = 0.960
  5'(0.960)3'
  coverage = 0.992
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 19, cyto_nucl 16, cyto 9
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0204366)

HIX0204366
HIT000313776_02 ( ENST00000360384 )
  (ROK, N-terminal domain containing protein.)
  genome : 96,068,290 - 96,070,285 (1,996)
  query : 98 - 2,038 (1,941/2,038)
  2 exons
  identity = 0.962
  5'(0.967;0.946)3'
  coverage = 0.952
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 20, cyto_nucl 16, cyto 8
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0204366)

HIX0204366
HIT000589189_01 ( ENST00000485383 )
  (Hypothetical protein.)
  genome : 96,068,398 - 96,069,783 (1,386)
  query : 1 - 1,386 (1,386/1,386)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 15, extr 12, nucl 4
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0204366)

HIX0204590
HIT000571531 ( ENST00000466902 )
  (Histone-binding protein RBBP4, N-terminal domain containing protein.)
  genome : 96,285,201 - 96,285,947 (747)
  query : 1 - 747 (747/747)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 19.5, cyto_nucl 15, extr 7, nucl 5.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0204590)

HIX0031183
HIT000655636_01 ( NM_001190470 )
  (Humanin family protein.)
  genome : 96,336,053 - 96,337,067 (1,015)
  query : 1 - 1,014 (1,014/1,036)
  1 exon
  identity = 0.965
  3'(0.965)5'
  coverage = 0.979
  SOSUI :
    SOLUBLE PROTEIN
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0031183)

HIX0031183
HIT000711958_01 ( ENST00000600213 )
  (Humanin family protein.)
  genome : 96,336,043 - 96,336,117 (75)
  query : 1 - 75 (75/75)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0031183)

HIX0031183
HIT000464013_05 ( DQ597482 )
  Representative transcript
  (Non-protein coding transcript.)
  genome : 96,336,788 - 96,336,818 (31)
  query : 1 - 31 (31/31)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0031183)

HIX0215617
HIT000472930_02 ( ENST00000387342 )
  (Non-protein coding transcript.)
  genome : 96,337,080 - 96,337,148 (69)
  query : 1 - 69 (69/69)
  1 exon
  identity = 0.957
  3'(0.957)5'
  coverage = 1.000
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0215617)

HIX0120011
HIT000589843 ( ENST00000486071 )
  (Ribosomal protein L18a/LX domain containing protein.)
  genome : 96,338,148 - 96,338,675 (528)
  query : 1 - 528 (528/528)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 25, cyto 4.5, cyto_nucl 3.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0120011)

HIX0204883
HIT000595621 ( ENST00000492126 )
  (Conserved hypothetical protein.)
  genome : 96,472,029 - 96,473,515 (1,487)
  query : 1 - 1,487 (1,487/1,487)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 22, cyto_nucl 13.5, mito 4, extr 3, nucl 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0204883)

HIX0031295
pHIT000007024 ( pHIT000007024 )
  Representative transcript
  (Conserved hypothetical protein.)
  genome : 96,495,779 - 96,496,078 (300)
  query : 1 - 300 (300/300)
  1 exon
  SOSUI :
    SOLUBLE PROTEIN
  JIGSAW prediction
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0031295)
  CAGE tag :
    H39BB43C1310
  Ortholog candidate  ( -> Evola )
    Mus sp. (Mouse) : AK042362
    Macaca sp. (Macaque) : XR_010296

HIX0031295
HIT000575835 ( ENST00000471403 )
  (Protein CDV3 family protein.)
  genome : 96,495,789 - 96,496,527 (739)
  query : 1 - 739 (739/739)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 21, extr 4, cyto 2.5, cyto_nucl 2.5, golg 2,
    extr_plas 2
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0031295)

HIX0215297
HIT000575078 ( ENST00000470610 )
  (Ephrin receptor ligand binding domain containing protein.)
  genome : 96,533,425 - 96,963,540 (430,116)
  query : 1 - 2,058 (2,058/2,058)
  5 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 11, cyto_pero 7.5, cyto 7, pero 6, mito 5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0215297)

HIX0215297
HIT000641562 ( ENST00000542517 )
  (Ephrin receptor ligand binding domain containing protein.)
  genome : 96,533,621 - 96,728,968 (195,348)
  query : 1 - 1,082 (1,082/1,082)
  4 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 20, cyto_nucl 4, nucl 3.5, cyto 3.5, mito 2,
    pero 2, mito_pero 2
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0215297)

HIX0215297
HIT000252782 ( AY358738 )
  (Ephrin type-A receptor 6; EC=2.7.10.1; EPH homology kinase 2; EHK-2; EPH-like kinase 12; EK12; Precursor;)
  genome : 96,533,635 - 96,728,971 (195,337)
  query : 12 - 1,082 (1,071/1,107)
  4 exons
  identity = 0.999
  5'(0.995;1.000;1.000;1.000)3'
  coverage = 0.990
  EC number :
    EC 2.7.10.1
  InterPro :
    IPR001090 : Ephrin receptor ligand binding domain
    IPR001426 : Tyrosine-protein kinase, receptor class V, conserved site
    IPR008979 : Galactose-binding domain-like
  GO :
    0005003 : Molecular Function : ephrin receptor activity
    0005524 : Molecular Function : ATP binding
    0006468 : Biological Process : protein phosphorylation
    0007169 : Biological Process : transmembrane receptor protein tyrosine kinase signaling pathway
    0016021 : Cellular Component : integral component of membrane
    0048013 : Biological Process : ephrin receptor signaling pathway
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 16, cyto_nucl 5.5, cyto 5, mito 5, nucl 4
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0215297)

HIX0215297
HIT000606630 ( ENST00000506569 )
  (Ephrin receptor ligand binding domain containing protein.)
  genome : 96,533,635 - 96,728,978 (195,344)
  query : 1 - 1,078 (1,078/1,078)
  4 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 17.5, cyto_nucl 13.5, extr 8, nucl 6.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0215297)

HIX0023013
HIT000020583 ( AK095728 )
  Representative transcript
  (Reverse transcriptase domain containing protein.)
  genome : 97,140,568 - 97,143,650 (3,083)
  query : 1 - 3,082 (3,082/3,082)
  1 exon
  identity = 0.999
  5'(0.999)3'
  coverage = 1.000
  InterPro :
    IPR000477 : Reverse transcriptase domain
  GO :
    0003723 : Molecular Function : RNA binding
    0003964 : Molecular Function : RNA-directed DNA polymerase activity
    0006278 : Biological Process : RNA-dependent DNA replication
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 12, mito 12, cyto_nucl 6, extr_plas 6,
    E.R._mito 6, mito_pero 6
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0023013)

HIX0003484
HIT000429115 ( AK310249 )
  (Ephrin type-A receptor 5 isoform b precursor.)
  genome : 97,158,454 - 97,466,375 (307,922)
  query : 1 - 1,690 (1,690/1,690)
  13 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  EC number :
    EC 2.7.10.1
  InterPro :
    IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
    IPR008266 : Tyrosine-protein kinase, active site
    IPR020635 : Tyrosine-protein kinase, catalytic domain
    IPR027936 : Ephrin receptor, transmembrane domain
  GO :
    0004672 : Molecular Function : protein kinase activity
    0004713 : Molecular Function : protein tyrosine kinase activity
    0006468 : Biological Process : protein phosphorylation
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    E.R. 17, extr 7, lyso 3, plas 2
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003484)

HIX0003484
HIT000581533 ( ENST00000477384 )
  (Ephrin type-A receptor 5 isoform b precursor.)
  genome : 97,158,454 - 97,466,375 (307,922)
  query : 1 - 1,690 (1,690/1,690)
  13 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  EC number :
    EC 2.7.10.1
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    E.R. 17, extr 7, lyso 3, plas 2
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003484)

HIX0003484
HIT000496664 ( AK302040 )
  Representative transcript
  (Ephrin type-A receptor 6 isoform b.)
  genome : 97,158,454 - 97,329,668 (171,215)
  query : 1 - 1,413 (1,413/1,413)
  16 exons
  identity = 0.999
  5'(1.000;1.000;0.994;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000)3'
  coverage = 1.000
  EC number :
    EC 2.7.10.1
  InterPro :
    IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
    IPR027936 : Ephrin receptor, transmembrane domain
  GO :
    0004672 : Molecular Function : protein kinase activity
    0006468 : Biological Process : protein phosphorylation
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    cyto 18, pero 6, mito 4, golg 2, E.R._mito 2
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003484)
  Ortholog candidate  ( -> Evola )
    Gallus sp. (Chicken) : AB083185
    Bos sp. (Cow) : ENSBTAT00000000668
    Oryzias sp. (Medaka) : ENSORLT00000006758
    Pongo sp. (Orangutan) : ENSPPYT00000015840
    Tetraodon sp. (Tetraodon) : GSTENT00033546001
    Takifugu sp. (Fugu) : SINFRUT00000143141
    Mus sp. (Mouse) : U58332
    Macaca sp. (Macaque) : XM_001085352
    Danio sp. (Zebrafish) : XM_001344524
    Monodelphis sp. (Opossum) : XM_001380408
    Equus sp. (Horse) : XM_001502555
    Rattus sp. (Rat) : XM_221595
    Pan sp. (Chimpanzee) : XM_516608
    Canis sp. (Dog) : XM_844794

HIX0003484
HIT000604026 ( ENST00000503760 )
  (Ephrin type-A receptor 6 isoform b.)
  genome : 97,158,454 - 97,329,668 (171,215)
  query : 1 - 1,413 (1,413/1,413)
  16 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000)3'
  coverage = 1.000
  EC number :
    EC 2.7.10.1
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    cyto 25, plas 3, nucl 2, extr_plas 2
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003484)

HIX0003484
HIT000092464 ( BC031881 )
  (Ephrin type-A receptor 6 isoform b.)
  genome : 97,158,464 - 97,455,132 (296,669)
  query : 1 - 1,726 (1,726/1,751)
  13 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  EC number :
    EC 2.7.10.1
  InterPro :
    IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
    IPR008266 : Tyrosine-protein kinase, active site
    IPR020635 : Tyrosine-protein kinase, catalytic domain
    IPR027936 : Ephrin receptor, transmembrane domain
  GO :
    0004672 : Molecular Function : protein kinase activity
    0004713 : Molecular Function : protein tyrosine kinase activity
    0006468 : Biological Process : protein phosphorylation
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    cyto 26.5, cyto_nucl 14, plas 3
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003484)

HIX0003484
HIT000262532 ( BC067287 )
  (Ephrin type-A receptor 6 isoform b.)
  genome : 97,158,474 - 97,367,416 (208,943)
  query : 1 - 1,682 (1,682/1,697)
  13 exons
  identity = 0.999
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;0.992;1.000;1.000;1.000;0.997)3'
  coverage = 1.000
  EC number :
    EC 2.7.10.1
  InterPro :
    IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
    IPR008266 : Tyrosine-protein kinase, active site
    IPR027936 : Ephrin receptor, transmembrane domain
  GO :
    0004672 : Molecular Function : protein kinase activity
    0004713 : Molecular Function : protein tyrosine kinase activity
    0006468 : Biological Process : protein phosphorylation
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    cyto 27, plas 3
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003484)

HIX0003484
HIT000613620 ( ENST00000514100 )
  (Ephrin type-A receptor 6 isoform b.)
  genome : 97,158,474 - 97,367,417 (208,944)
  query : 1 - 1,682 (1,682/1,682)
  13 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  EC number :
    EC 2.7.10.1
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    cyto 25, plas 4
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003484)

HIX0003484
HIT000496704 ( AK302080 )
  (Ephrin type-A receptor 6 isoform a.)
  genome : 97,160,258 - 97,356,907 (196,650)
  query : 18 - 1,208 (1,191/1,208)
  10 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000)3'
  coverage = 0.986
  EC number :
    EC 2.7.10.1
  InterPro :
    IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
    IPR003961 : Fibronectin type III
    IPR027936 : Ephrin receptor, transmembrane domain
  GO :
    0004672 : Molecular Function : protein kinase activity
    0005515 : Molecular Function : protein binding
    0006468 : Biological Process : protein phosphorylation
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    cyto 24, E.R._mito 4, mito 3.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003484)

HIX0003484
HIT000025133 ( AL133666 )
  (Ephrin type-A receptor 6 isoform b.)
  genome : 97,160,258 - 97,367,421 (207,164)
  query : 11 - 1,594 (1,584/1,619)
  12 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000)3'
  coverage = 0.994
  EC number :
    EC 2.7.10.1
  InterPro :
    IPR001245 : Serine-threonine/tyrosine-protein kinase catalytic domain
    IPR008266 : Tyrosine-protein kinase, active site
    IPR027936 : Ephrin receptor, transmembrane domain
  GO :
    0004672 : Molecular Function : protein kinase activity
    0004713 : Molecular Function : protein tyrosine kinase activity
    0006468 : Biological Process : protein phosphorylation
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    cyto 28, plas 3
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003484)

HIX0003484
HIT000215031 ( NM_173655 )
  (Ephrin type-A receptor 6 isoform b.)
  genome : 97,160,258 - 97,367,421 (207,164)
  query : 11 - 1,594 (1,584/1,617)
  12 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000)3'
  coverage = 0.994
  EC number :
    EC 2.7.10.1
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    cyto 28, plas 3
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003484)

HIX0003484
HIT000603028 ( ENST00000502694 )
  (Ephrin type-A receptor 6 isoform b.)
  genome : 97,160,260 - 97,367,421 (207,162)
  query : 1 - 1,582 (1,582/1,582)
  12 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  EC number :
    EC 2.7.10.1
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    cyto 28, plas 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003484)

HIX0003484
HIT000608279 ( ENST00000508345 )
  (Ephrin type-A receptor 6 isoform a.)
  genome : 97,160,260 - 97,356,907 (196,648)
  query : 1 - 1,189 (1,189/1,189)
  10 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000)3'
  coverage = 1.000
  EC number :
    EC 2.7.10.1
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    cyto 24, E.R._mito 4, mito 3.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003484)

HIX0003484
HIT000540536 ( ENST00000442602 )
  (Ephrin type-A receptor 6 isoform a.)
  genome : 97,167,400 - 97,356,907 (189,508)
  query : 1 - 1,144 (1,144/1,144)
  9 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000)3'
  coverage = 1.000
  EC number :
    EC 2.7.10.1
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    cyto 19, E.R._mito 4.83333, mito 3.5, nucl 3,
    mito_pero 2.83333, plas 2, extr 2, E.R. 2, extr_plas 2
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003484)

HIX0003485
HIT000005326 ( AK022052 )
  Representative transcript
  (Conserved hypothetical protein.)
  genome : 97,172,480 - 97,174,696 (2,217)
  query : 1 - 2,218 (2,218/2,218)
  1 exon
  identity = 0.998
  5'(0.998)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 16, nucl 8.5, E.R._mito 8.5, cyto_nucl 6.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003485)

HIX0215593
HIT000363252 ( ENST00000381974 )
  (Protein-tyrosine phosphatase-like domain containing protein.)
  genome : 97,200,021 - 97,200,350 (330)
  query : 1 - 330 (330/330)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 21, mito 5.5, cyto 3.5, E.R._mito 3.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0215593)

HIX0003484
HIT000606418 ( ENST00000506349 )
  (Ephrin type-A receptor 6 isoform a.)
  genome : 97,466,364 - 97,471,304 (4,941)
  query : 1 - 681 (681/681)
  3 exons
  identity = 1.000
  5'(1.000;1.000;1.000)3'
  coverage = 1.000
  EC number :
    EC 2.7.10.1
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cysk 21, extr 7, nucl 2
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003484)

HIX0003486
HIT000675396 ( ENST00000562191 )
  (Conserved hypothetical protein.)
  genome : 97,478,367 - 97,480,374 (2,008)
  query : 1 - 2,008 (2,008/2,008)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    cyto 11.5, cyto_nucl 9.5, extr 9, cysk 6, nucl 4.5,
    extr_plas 4.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003486)

HIX0003486
HIT000003431 ( AK000957 )
  Representative transcript
  (Conserved hypothetical protein.)
  genome : 97,478,874 - 97,480,374 (1,501)
  query : 1 - 1,501 (1,501/1,501)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    cyto 11.5, cyto_nucl 9.5, extr 9, cysk 6, nucl 4.5,
    extr_plas 4.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003486)

HIX0017935
HIT000597403 ( ENST00000493990 )
  (ADP-ribosylation factor-like protein 6; Bardet-Biedl syndrome 3 protein;)
  genome : 97,483,365 - 97,519,953 (36,589)
  query : 1 - 1,705 (1,705/1,705)
  10 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 19, extr 8, nucl 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0017935)

HIX0017935
HIT000568526 ( ENST00000463745 )
  (ADP-ribosylation factor-like protein 6; Bardet-Biedl syndrome 3 protein;)
  genome : 97,483,372 - 97,517,373 (34,002)
  query : 1 - 1,518 (1,518/1,518)
  8 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 19, extr 8, nucl 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0017935)

HIX0017935
HIT000567249 ( ENST00000462412 )
  (ADP-ribosylation factor-like protein 6; Bardet-Biedl syndrome 3 protein;)
  genome : 97,483,377 - 97,503,897 (20,521)
  query : 1 - 884 (884/894)
  6 exons
  identity = 0.999
  5'(1.000;1.000;1.000;1.000;1.000;0.990)3'
  coverage = 0.989
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 15, extr 8, cyto_pero 8, mito 4.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0017935)

HIX0017935
HIT000210428 ( NM_032146 )
  (ADP-ribosylation factor-like protein 6; Bardet-Biedl syndrome 3 protein;)
  genome : 97,483,595 - 97,517,372 (33,778)
  query : 1 - 1,393 (1,393/1,408)
  9 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 19, extr 8, nucl 3
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0017935)

HIX0017935
HIT000215523 ( NM_177976 )
  (ADP-ribosylation factor-like protein 6; Bardet-Biedl syndrome 3 protein;)
  genome : 97,483,595 - 97,517,372 (33,778)
  query : 1 - 1,353 (1,353/1,368)
  9 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 19, extr 8, nucl 3
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0017935)

HIX0017935
HIT000129882 ( ENST00000335979 )
  (ADP-ribosylation factor-like protein 6; Bardet-Biedl syndrome 3 protein;)
  genome : 97,483,595 - 97,517,369 (33,775)
  query : 1 - 1,390 (1,390/1,390)
  9 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 19, extr 8, nucl 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0017935)

HIX0017935
HIT000477624 ( ENST00000394206 )
  (ADP-ribosylation factor-like protein 6; Bardet-Biedl syndrome 3 protein;)
  genome : 97,483,595 - 97,517,369 (33,775)
  query : 1 - 1,350 (1,350/1,350)
  9 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 19, extr 8, nucl 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0017935)

HIX0017935
HIT000425755 ( AK292958 )
  (ADP-ribosylation factor-like protein 6; Bardet-Biedl syndrome 3 protein;)
  genome : 97,483,602 - 97,517,088 (33,487)
  query : 1 - 1,003 (1,003/1,003)
  8 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000)3'
  coverage = 1.000
  InterPro :
    IPR005225 : Small GTP-binding protein domain
    IPR006689 : Small GTPase superfamily, ARF/SAR type
    IPR024156 : Small GTPase superfamily, ARF type
  GO :
    0005525 : Molecular Function : GTP binding
    0005622 : Cellular Component : intracellular
    0007264 : Biological Process : small GTPase mediated signal transduction
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 19, extr 8, nucl 3
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0017935)

HIX0017935
HIT000429695 ( AK310829 )
  (ADP-ribosylation factor-like protein 6; Bardet-Biedl syndrome 3 protein;)
  genome : 97,483,611 - 97,510,191 (26,581)
  query : 1 - 851 (851/851)
  7 exons
  identity = 0.999
  5'(1.000;1.000;1.000;0.986;1.000;1.000;1.000)3'
  coverage = 1.000
  InterPro :
    IPR005225 : Small GTP-binding protein domain
    IPR006689 : Small GTPase superfamily, ARF/SAR type
    IPR024156 : Small GTPase superfamily, ARF type
  GO :
    0005525 : Molecular Function : GTP binding
    0005622 : Cellular Component : intracellular
    0007264 : Biological Process : small GTPase mediated signal transduction
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 16, extr 12, nucl 3
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0017935)

HIX0017935
HIT000600021 ( ENST00000496713 )
  (ADP-ribosylation factor-like protein 6; Bardet-Biedl syndrome 3 protein;)
  genome : 97,483,611 - 97,510,191 (26,581)
  query : 1 - 851 (851/851)
  7 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 16, extr 12, nucl 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0017935)

HIX0017935
HIT000430147 ( AK311281 )
  (ADP-ribosylation factor-like protein 6; Bardet-Biedl syndrome 3 protein;)
  genome : 97,483,629 - 97,518,123 (34,495)
  query : 1 - 810 (810/810)
  3 exons
  identity = 0.993
  5'(1.000;0.991;0.990)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 19, nucl 5.5, cyto_nucl 5.5, cyto 4.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0017935)

HIX0017935
HIT000025411 ( AL136815 )
  (ADP-ribosylation factor-like protein 6; Bardet-Biedl syndrome 3 protein;)
  genome : 97,486,938 - 97,517,008 (30,071)
  query : 1 - 690 (690/717)
  7 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  InterPro :
    IPR005225 : Small GTP-binding protein domain
    IPR006689 : Small GTPase superfamily, ARF/SAR type
    IPR024156 : Small GTPase superfamily, ARF type
  GO :
    0005525 : Molecular Function : GTP binding
    0005622 : Cellular Component : intracellular
    0007264 : Biological Process : small GTPase mediated signal transduction
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 19, extr 8, nucl 3
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0017935)

HIX0017935
HIT000580931 ( ENST00000476753 )
  (ADP-ribosylation factor-like protein 6; Bardet-Biedl syndrome 3 protein;)
  genome : 97,503,861 - 97,517,379 (13,519)
  query : 1 - 675 (675/675)
  3 exons
  identity = 1.000
  5'(1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 12.5, mito 12, cyto_nucl 10, nucl 6.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0017935)

HIX0017935
HIT000597762 ( ENST00000494363 )
  (Conserved hypothetical protein.)
  genome : 97,512,216 - 97,519,951 (7,736)
  query : 1 - 553 (553/553)
  3 exons
  identity = 1.000
  5'(1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 17, cyto_nucl 11, extr 8, nucl 3, mito 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0017935)

HIX0003488
HIT000214377 ( NM_153605 )
  (Beta/gamma crystallin domain-containing protein 3;)
  genome : 97,540,884 - 97,663,830 (122,947)
  query : 1 - 10,752 (10,752/10,767)
  22 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 27, mito 4
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003488)

HIX0003488
HIT000517521 ( ENST00000419587 )
  (Beta/gamma crystallin domain-containing protein 3.)
  genome : 97,540,884 - 97,594,133 (53,250)
  query : 1 - 4,262 (4,262/4,262)
  4 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 27, mito 4
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003488)

HIX0003488
HIT000491590 ( AK296966 )
  (Beta/gamma crystallin domain-containing protein 3.)
  genome : 97,540,884 - 97,594,132 (53,249)
  query : 1 - 4,261 (4,261/4,261)
  4 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 27, mito 4
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003488)
  Ortholog candidate  ( -> Evola )
    Gallus sp. (Chicken) : CR407575
    Rattus sp. (Rat) : XM_001057435
    Equus sp. (Horse) : XM_001502524
    Canis sp. (Dog) : XM_535710
    Bos sp. (Cow) : XM_594681

HIX0003489
HIT000050178 ( AK130907 )
  (Hypothetical protein.)
  genome : 97,594,157 - 97,663,801 (69,645)
  query : 1 - 1,735 (1,735/1,735)
  2 exons
  identity = 0.996
  3'(0.999)5'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 31
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003489)

HIX0003488
HIT000057000 ( BX648353 )
  Representative transcript
  (Beta/gamma crystallin domain-containing protein 3;)
  genome : 97,595,819 - 97,663,802 (67,984)
  query : 1 - 4,775 (4,775/4,793)
  19 exons
  identity = 0.997
  5'(0.996;1.000;1.000;1.000)3'
  coverage = 1.000
  InterPro :
    IPR000772 : Ricin B lectin domain
    IPR001064 : Beta/gamma crystallin
    IPR011024 : Gamma-crystallin-related
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 22, cyto 9
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003488)
  Ortholog candidate  ( -> Evola )
    Macaca sp. (Macaque) : AB056765
    Mus sp. (Mouse) : BC043118
    Gallus sp. (Chicken) : CR407575
    Oryzias sp. (Medaka) : ENSORLT00000016033
    Rattus sp. (Rat) : XM_001057435
    Monodelphis sp. (Opossum) : XM_001380476
    Equus sp. (Horse) : XM_001917475
    Pan sp. (Chimpanzee) : XM_526496
    Canis sp. (Dog) : XM_535710
    Bos sp. (Cow) : XM_594681

HIX0003488
HIT000102580 ( ENST00000182096 )
  (Beta/gamma crystallin domain-containing protein 3;)
  genome : 97,595,819 - 97,663,807 (67,989)
  query : 1 - 4,782 (4,782/4,782)
  19 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 22, cyto 9
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003488)

HIX0003488
HIT000306352 ( CR749313 )
  (Beta/gamma crystallin domain-containing protein 3.)
  genome : 97,596,748 - 97,663,810 (67,063)
  query : 1 - 3,861 (3,861/3,878)
  19 exons
  identity = 0.998
  5'(0.993;1.000;1.000;1.000)3'
  coverage = 1.000
  InterPro :
    IPR000772 : Ricin B lectin domain
    IPR001064 : Beta/gamma crystallin
    IPR011024 : Gamma-crystallin-related
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 16.5, cyto_nucl 15.5, nucl 11.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003488)

HIX0215797
HIT000398036 ( NM_001080448 )
  (Ephrin receptor ligand binding domain containing protein.)
  genome : 96,533,425 - 97,467,786 (934,362)
  query : 1 - 3,677 (3,677/3,677)
  18 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  EC number :
    EC 2.7.10.1
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    mito 9, nucl 6, E.R._mito 6, plas 5, cyto 5,
    cyto_plas 5
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0215797)

HIX0215797
HIT000396580 ( ENST00000389672 )
  (Ephrin receptor ligand binding domain containing protein.)
  genome : 96,533,430 - 97,468,085 (934,656)
  query : 1 - 3,971 (3,971/3,971)
  18 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    mito 9, nucl 6, E.R._mito 6, plas 5, cyto 5,
    cyto_plas 5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0215797)

HIX0031295
pHIT000007024 ( pHIT000007024 )
  Representative transcript
  (Conserved hypothetical protein.)
  genome : 96,495,779 - 96,496,078 (300)
  query : 1 - 300 (300/300)
  1 exon
  SOSUI :
    SOLUBLE PROTEIN
  JIGSAW prediction
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0031295)
  CAGE tag :
    H08BA26K2101,H09BA25A1913,H10BB14B0210
    H33BB46J1201,H39BB43C1310
  Ortholog candidate  ( -> Evola )
    Mus sp. (Mouse) : AK042362
    Macaca sp. (Macaque) : XR_010296

AC107304.5
96000001-96126023 F -
NCBI

AC108697.3
96126024-96224047 F +
NCBI

AC107015.6
96224048-96301079 F +
NCBI

AC117444.6
96301080-96403932 F +
NCBI

AC106717.7
96403933-96429862 F -
NCBI

AC109782.7
96429863-96591449 F -
NCBI

AC108714.3
96591450-96694487 F -
NCBI

AC119745.2
96694488-96766813 F -
NCBI

AC134730.2
96766814-96810398 F -
NCBI

AC107482.2
96810399-96989014 F -
NCBI

AC110717.11
96989015-97043538 F -
NCBI

AC117470.8
97043539-97232164 F +
NCBI

AC130510.3
97232165-97292564 F +
NCBI

AC117439.5
97292565-97463236 F -
NCBI

AC135369.2
97463237-97475981 F -
NCBI

AC110491.5
97475982-97600000 F -
NCBI

bases per tick : kb first site :
main : All Human Genes JIGSAW prediction ESTs assembly
homology : UCSC CCDS Pseudogene.org Conserved regions ( Segmental duplication P.troglodytes P.abelii M.mulatta M.musculus R.norvegicus C.familiaris E.caballus B.taurus M.domestica G.gallus D.rerio O.latipes T.nigroviridis T.rubripes )
gene prediction : FGENESH GenScan HMMgene tRNA
show... : SNPs ESTs(summary) ESTs(detail) CAGE tag(summary) CAGE tag(detail)
sequence viewer : = ( , )