Clickable map CGI

HIX0003478
HIT000306973 ( CR936700 )
  Representative transcript
  (Transcription cofactor vestigial-like protein 3.)
  genome : 86,989,988 - 87,039,910 (49,923)
  query : 1 - 7,187 (7,187/7,288)
  4 exons
  identity = 0.998
  3'(0.996;1.000;1.000)5'
  coverage = 1.000
  InterPro :
    IPR006627 : TDU repeat
    IPR011520 : Vestigial/tondu
  GO :
    0005634 : Cellular Component : nucleus
    0006355 : Biological Process : regulation of transcription, DNA-templated
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 22, cyto_nucl 14.5, cyto 5, extr 3
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003478)

HIX0003478
HIT000335081 ( BC094780 )
  (Transcription cofactor vestigial-like protein 3.)
  genome : 87,011,056 - 87,040,269 (29,214)
  query : 1 - 2,475 (2,475/2,491)
  4 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  InterPro :
    IPR006627 : TDU repeat
    IPR011520 : Vestigial/tondu
  GO :
    0005634 : Cellular Component : nucleus
    0006355 : Biological Process : regulation of transcription, DNA-templated
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 21, cyto_nucl 14, cyto 5, extr 4
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003478)

HIX0003478
HIT000364976 ( ENST00000383698 )
  (Vestigial/tondu family protein.)
  genome : 87,011,056 - 87,040,269 (29,214)
  query : 1 - 2,475 (2,475/2,475)
  4 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 21, cyto_nucl 14, cyto 5, extr 4
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003478)

HIX0003478
HIT000597634 ( ENST00000494229 )
  (Vestigial/tondu family protein.)
  genome : 87,017,853 - 87,039,852 (22,000)
  query : 1 - 624 (624/624)
  3 exons
  identity = 1.000
  3'(1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 18, cyto 8, extr 6
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003478)

HIX0204325
HIT000199581_02 ( NM_002703 )
  (Amidophosphoribosyl transferase family protein.)
  genome : 87,098,355 - 87,102,019 (3,665)
  query : 29 - 3,701 (3,673/3,713)
  1 exon
  identity = 0.953
  3'(0.953)5'
  coverage = 0.992
  EC number :
    EC 2.4.2.14
  KEGG pathway :
    00230 : Purine metabolism (100)
    00250 : Alanine, aspartate and glutamate metabolism (43)
    01100 : Metabolic pathways (1346)
    01110 : Biosynthesis of secondary metabolites (562)
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 14, cysk 12, nucl 4
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0204325)

HIX0204325
HIT000109229_02 ( ENST00000264220 )
  (Amidophosphoribosyl transferase family protein.)
  genome : 87,098,353 - 87,102,019 (3,667)
  query : 8 - 3,682 (3,675/3,682)
  1 exon
  identity = 0.953
  3'(0.953)5'
  coverage = 0.998
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 14, cysk 12, nucl 4
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0204325)

HIX0204325
HIT000599979_01 ( ENST00000496669 )
  (Phosphoribosyltransferase domain containing protein.)
  genome : 87,100,342 - 87,101,888 (1,547)
  query : 1 - 1,547 (1,547/1,547)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 21, cyto 5, nucl 3, cyto_pero 3, cyto_golg 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0204325)

HIX0030811
HIT000092170 ( BC030609 )
  Representative transcript
  (Conserved hypothetical protein.)
  genome : 87,138,430 - 87,147,852 (9,423)
  query : 4 - 4,303 (4,300/4,340)
  2 exons
  identity = 0.999
  5'(0.997;0.999)3'
  coverage = 0.999
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 27, mito 3
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0030811)

HIX0030811
HIT000099164 ( BC050344 )
  (Conserved hypothetical protein.)
  genome : 87,138,432 - 87,147,852 (9,421)
  query : 1 - 4,298 (4,298/4,335)
  2 exons
  identity = 0.999
  5'(0.997;0.999)3'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 27, mito 3
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0030811)

HIX0215558
HIT000696055 ( ENST00000584182 )
  (Non-protein coding transcript.)
  genome : 87,275,339 - 87,275,427 (89)
  query : 1 - 89 (89/89)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0215558)

HIX0215558
HIT000726021 ( NR_039958 )
  (Non-protein coding transcript.)
  genome : 87,275,339 - 87,275,427 (89)
  query : 1 - 89 (89/89)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0215558)

HIX0003479
HIT000204489 ( NM_014043 )
  (Charged multivesicular body protein 2b; CHMP2.5; Chromatin-modifying protein 2b; CHMP2b; Vacuolar protein sorting-associated protein 2-2; Vps2-2; hVps2-2;)
  genome : 87,276,413 - 87,304,698 (28,286)
  query : 1 - 2,628 (2,628/2,643)
  6 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 17.5, cyto_nucl 12.5, extr 7, nucl 4.5
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003479)

HIX0003479
HIT000723114 ( NM_001244644 )
  (Charged multivesicular body protein 2b isoform 2.)
  genome : 87,276,413 - 87,304,698 (28,286)
  query : 1 - 2,536 (2,536/2,551)
  5 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 21.5, cyto_nucl 13.5, nucl 4.5, extr 3
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003479)

HIX0003479
HIT000490696 ( AK296072 )
  (Charged multivesicular body protein 2b isoform 2.)
  genome : 87,276,421 - 87,303,064 (26,644)
  query : 1 - 894 (894/894)
  5 exons
  identity = 0.999
  5'(1.000;0.995;1.000;1.000;1.000)3'
  coverage = 1.000
  InterPro :
    IPR005024 : Snf7 family
  GO :
    0015031 : Biological Process : protein transport
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 21.5, cyto_nucl 13.5, nucl 4.5, extr 3
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003479)

HIX0003479
HIT000576073 ( ENST00000471660 )
  (Charged multivesicular body protein 2b isoform 2.)
  genome : 87,276,421 - 87,303,064 (26,644)
  query : 1 - 894 (894/894)
  5 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 21.5, cyto_nucl 13.5, nucl 4.5, extr 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003479)

HIX0003479
HIT000109035 ( ENST00000263780 )
  (Charged multivesicular body protein 2b; CHMP2.5; Chromatin-modifying protein 2b; CHMP2b; Vacuolar protein sorting-associated protein 2-2; Vps2-2; hVps2-2;)
  genome : 87,276,435 - 87,304,698 (28,264)
  query : 1 - 2,606 (2,606/2,606)
  6 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 17.5, cyto_nucl 12.5, extr 7, nucl 4.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003479)

HIX0003479
HIT000004654 ( AK002180 )
  (Charged multivesicular body protein 2b; CHMP2.5; Chromatin-modifying protein 2b; CHMP2b; Vacuolar protein sorting-associated protein 2-2; Vps2-2; hVps2-2;)
  genome : 87,276,435 - 87,304,066 (27,632)
  query : 1 - 1,974 (1,974/1,974)
  6 exons
  identity = 0.997
  5'(0.996;1.000;0.990;1.000;1.000;0.998)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 17.5, cyto_nucl 12.5, extr 7, nucl 4.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003479)

HIX0003479
HIT000024243 ( AL080122 )
  (Charged multivesicular body protein 2b; CHMP2.5; Chromatin-modifying protein 2b; CHMP2b; Vacuolar protein sorting-associated protein 2-2; Vps2-2; hVps2-2;)
  genome : 87,276,444 - 87,304,065 (27,622)
  query : 5 - 1,967 (1,963/1,985)
  6 exons
  identity = 0.995
  5'(0.996;1.000;0.995;1.000;1.000;0.993)3'
  coverage = 0.998
  InterPro :
    IPR005024 : Snf7 family
  GO :
    0015031 : Biological Process : protein transport
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 18, cyto_nucl 15, nucl 6, mito 3, extr 2, pero 2
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003479)

HIX0003479
HIT000434796 ( AK316585 )
  (Charged multivesicular body protein 2b; CHMP2.5; Chromatin-modifying protein 2b; CHMP2b; Vacuolar protein sorting-associated protein 2-2; Vps2-2; hVps2-2;)
  genome : 87,276,450 - 87,302,972 (26,523)
  query : 2 - 866 (865/866)
  6 exons
  identity = 0.998
  5'(0.996;1.000;0.995;1.000;1.000;1.000)3'
  coverage = 0.999
  InterPro :
    IPR005024 : Snf7 family
  GO :
    0015031 : Biological Process : protein transport
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 17.5, cyto_nucl 12.5, extr 7, nucl 4.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003479)

HIX0003479
HIT000598362 ( ENST00000494980 )
  (Charged multivesicular body protein 2b; CHMP2.5; Chromatin-modifying protein 2b; CHMP2b; Vacuolar protein sorting-associated protein 2-2; Vps2-2; hVps2-2;)
  genome : 87,276,452 - 87,303,065 (26,614)
  query : 1 - 866 (866/877)
  6 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 17.5, cyto_nucl 14.1667, cyto_plas 10.6667,
    nucl 5.5, extr 5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003479)

HIX0003479
HIT000071655 ( AF151842 )
  (Charged multivesicular body protein 2b; CHMP2.5; Chromatin-modifying protein 2b; CHMP2b; Vacuolar protein sorting-associated protein 2-2; Vps2-2; hVps2-2;)
  genome : 87,276,475 - 87,303,076 (26,602)
  query : 23 - 965 (943/975)
  6 exons
  identity = 0.998
  5'(0.996;1.000;0.995;1.000;1.000;1.000)3'
  coverage = 0.967
  InterPro :
    IPR005024 : Snf7 family
  GO :
    0015031 : Biological Process : protein transport
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 17.5, cyto_nucl 12.5, extr 7, nucl 4.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003479)

HIX0003479
HIT000330434 ( AK222654 )
  (Charged multivesicular body protein 2b; CHMP2.5; Chromatin-modifying protein 2b; CHMP2b; Vacuolar protein sorting-associated protein 2-2; Vps2-2; hVps2-2;)
  genome : 87,276,453 - 87,303,065 (26,613)
  query : 1 - 955 (955/968)
  6 exons
  identity = 0.998
  5'(1.000;1.000;0.995;0.990;1.000;1.000)3'
  coverage = 1.000
  InterPro :
    IPR005024 : Snf7 family
  GO :
    0015031 : Biological Process : protein transport
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 15.5, cyto_nucl 12.5, extr 8, nucl 6.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003479)

HIX0003479
HIT000576423 ( ENST00000472024 )
  (Charged multivesicular body protein 2b isoform 2.)
  genome : 87,276,459 - 87,302,620 (26,162)
  query : 1 - 836 (836/836)
  6 exons
  identity = 0.988
  5'(1.000;1.000;0.912;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 18.5, cyto_nucl 17.6667, cyto_plas 11.3333,
    nucl 9.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003479)

HIX0003479
HIT000030488 ( BC001553 )
  (Charged multivesicular body protein 2b; CHMP2.5; Chromatin-modifying protein 2b; CHMP2b; Vacuolar protein sorting-associated protein 2-2; Vps2-2; hVps2-2;)
  genome : 87,276,597 - 87,304,649 (28,053)
  query : 1 - 2,395 (2,395/2,410)
  6 exons
  identity = 0.999
  5'(1.000;1.000;0.995;1.000;1.000;0.999)3'
  coverage = 1.000
  InterPro :
    IPR005024 : Snf7 family
  GO :
    0015031 : Biological Process : protein transport
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 17.5, cyto_nucl 12.5, extr 7, nucl 4.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003479)

HIX0003479
HIT000268304 ( CR533456 )
  (Charged multivesicular body protein 2b; CHMP2.5; Chromatin-modifying protein 2b; CHMP2b; Vacuolar protein sorting-associated protein 2-2; Vps2-2; hVps2-2;)
  genome : 87,276,673 - 87,303,154 (26,482)
  query : 1 - 823 (823/823)
  6 exons
  identity = 0.993
  5'(0.971;1.000;0.995;1.000;1.000;0.986)3'
  coverage = 1.000
  InterPro :
    IPR005024 : Snf7 family
  GO :
    0015031 : Biological Process : protein transport
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 18, cyto_nucl 15, nucl 6, mito 3, extr 2, pero 2
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003479)

HIX0003479
HIT000571334 ( ENST00000466696 )
  (Charged multivesicular body protein 2b; CHMP2.5; Chromatin-modifying protein 2b; CHMP2b; Vacuolar protein sorting-associated protein 2-2; Vps2-2; hVps2-2;)
  genome : 87,302,199 - 87,303,063 (865)
  query : 1 - 664 (664/664)
  2 exons
  identity = 1.000
  5'(1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cysk 10, extr 9, cyto 6, nucl 3, mito 3, cyto_plas 3,
    cyto_golg 3, mito_nucl 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003479)

HIX0030861
HIT000307937 ( ENST00000350375 )
  (Pituitary-specific positive transcription factor 1; PIT-1; Growth hormone factor 1; GHF-1;)
  genome : 87,308,554 - 87,325,737 (17,184)
  query : 1 - 1,491 (1,491/1,491)
  6 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0030861)

HIX0030861
HIT000197351 ( NM_000306 )
  (Pituitary-specific positive transcription factor 1; PIT-1; Growth hormone factor 1; GHF-1;)
  genome : 87,308,783 - 87,325,737 (16,955)
  query : 1 - 1,262 (1,262/1,262)
  6 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0030861)

HIX0030861
HIT000486049 ( NM_001122757 )
  (Pituitary-specific positive transcription factor 1; PIT-1; Growth hormone factor 1; GHF-1;)
  genome : 87,308,783 - 87,325,737 (16,955)
  query : 1 - 1,340 (1,340/1,340)
  6 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0030861)

HIX0030861
HIT000136895 ( ENST00000344265 )
  (Pituitary-specific positive transcription factor 1; PIT-1; Growth hormone factor 1; GHF-1;)
  genome : 87,308,891 - 87,325,654 (16,764)
  query : 1 - 1,149 (1,149/1,149)
  6 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0030861)

HIX0030861
HIT000674394 ( ENST00000561167 )
  (Pituitary-specific positive transcription factor 1; PIT-1; Growth hormone factor 1; GHF-1;)
  genome : 87,309,045 - 87,325,612 (16,568)
  query : 1 - 650 (650/650)
  5 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0030861)

HIX0030861
HIT000673895 ( ENST00000560656 )
  (Pituitary-specific positive transcription factor 1; PIT-1; Growth hormone factor 1; GHF-1;)
  genome : 87,309,047 - 87,325,612 (16,566)
  query : 1 - 647 (647/647)
  4 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto_nucl 17, cyto 16, nucl 12
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0030861)

HIX0030861
HIT000216480 ( S73501 )
  (Non-protein coding transcript.)
  genome : 87,322,564 - 87,322,648 (85)
  query : 6 - 90 (85/90)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 0.944
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0030861)

HIX0204660
HIT000577492 ( ENST00000473150 )
  (Intermediate filament protein family protein.)
  genome : 87,372,418 - 87,373,873 (1,456)
  query : 1 - 1,456 (1,456/1,456)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 21, nucl 5, extr 2, cyto 2, pero 2, cyto_pero 2
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0204660)

HIX0204519
HIT000566439 ( ENST00000461561 )
  (Conserved hypothetical protein.)
  genome : 87,643,988 - 87,644,526 (539)
  query : 1 - 539 (539/539)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 14, mito 6, cyto 5, mito_nucl 5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0204519)

HIX0204707
HIT000581388 ( ENST00000477233 )
  (Conserved hypothetical protein.)
  genome : 87,679,451 - 87,680,769 (1,319)
  query : 1 - 1,319 (1,319/1,319)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 15, cyto_nucl 9, cyto 8.5, nucl 6.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0204707)

HIX0204539
HIT000567613 ( ENST00000462792 )
  (Hypothetical short protein.)
  genome : 87,780,552 - 87,842,779 (62,228)
  query : 1 - 766 (766/766)
  2 exons
  identity = 1.000
  3'(1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 15, cyto_nucl 8, mito 7, cyto 6, nucl 4
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0204539)

HIX0163522
HIT000506276 ( ENST00000408132 )
  (Hypothetical short protein.)
  genome : 87,959,370 - 87,959,495 (126)
  query : 1 - 126 (126/126)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    This sequence is too short.
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0163522)

HIX0030749
HIT000197876 ( NM_000866 )
  (5-hydroxytryptamine receptor 1F; 5-HT-1F; 5-HT1F; Serotonin receptor 1F;)
  genome : 88,031,726 - 88,042,919 (11,194)
  query : 1 - 3,178 (3,178/3,178)
  2 exons
  identity = 1.000
  5'(1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 32
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0030749)

HIX0030749
HIT000122117 ( ENST00000319595 )
  (5-hydroxytryptamine receptor 1F; 5-HT-1F; 5-HT1F; Serotonin receptor 1F;)
  genome : 88,039,846 - 88,042,919 (3,074)
  query : 1 - 3,074 (3,074/3,074)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 32
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0030749)

HIX0003480
HIT000656043 ( NM_001195308 )
  (CGG triplet repeat-binding protein 1; CGG-binding protein 1; 20 kDa CGG-binding protein; p20-CGGBP DNA-binding protein;)
  genome : 88,101,100 - 88,199,016 (97,917)
  query : 1 - 4,520 (4,520/4,589)
  4 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 11, nucl 10.5, extr 8, cyto_nucl 8
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003480)

HIX0003480
HIT000200472 ( NM_003663 )
  (CGG triplet repeat-binding protein 1; CGG-binding protein 1; 20 kDa CGG-binding protein; p20-CGGBP DNA-binding protein;)
  genome : 88,101,100 - 88,108,146 (7,047)
  query : 1 - 4,437 (4,437/4,506)
  3 exons
  identity = 1.000
  3'(1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 11, nucl 10.5, extr 8, cyto_nucl 8
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003480)

HIX0003480
HIT000316509 ( NM_001008390 )
  (CGG triplet repeat-binding protein 1; CGG-binding protein 1; 20 kDa CGG-binding protein; p20-CGGBP DNA-binding protein;)
  genome : 88,101,100 - 88,108,146 (7,047)
  query : 1 - 4,539 (4,539/4,608)
  4 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 11, nucl 10.5, extr 8, cyto_nucl 8
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003480)

HIX0003480
HIT000053852 ( BC052980 )
  Representative transcript
  (CGG triplet repeat-binding protein 1; CGG-binding protein 1; 20 kDa CGG-binding protein; p20-CGGBP DNA-binding protein;)
  genome : 88,101,100 - 88,108,048 (6,949)
  query : 1 - 4,334 (4,334/4,403)
  3 exons
  identity = 0.998
  3'(0.999;1.000;0.988)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 11, nucl 10.5, extr 8, cyto_nucl 8
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003480)
  Ortholog candidate  ( -> Evola )
    Macaca sp. (Macaque) : AB171616
    Mus sp. (Mouse) : BC043097
    Equus sp. (Horse) : ENSECAT00000005235
    Pongo sp. (Orangutan) : ENSPPYT00000015859
    Rattus sp. (Rat) : XM_001063614
    Gallus sp. (Chicken) : XM_001232948
    Monodelphis sp. (Opossum) : XM_001363764
    Canis sp. (Dog) : XM_535549
    Bos sp. (Cow) : XM_611424

HIX0003480
HIT000118380 ( ENST00000309534 )
  (CGG triplet repeat-binding protein 1; CGG-binding protein 1; 20 kDa CGG-binding protein; p20-CGGBP DNA-binding protein;)
  genome : 88,101,094 - 88,108,198 (7,105)
  query : 1 - 4,495 (4,495/4,495)
  3 exons
  identity = 1.000
  3'(1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 11, nucl 10.5, extr 8, cyto_nucl 8
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003480)

HIX0003480
HIT000250392 ( AL357195 )
  (Hypothetical short protein.)
  genome : 88,101,165 - 88,101,717 (553)
  query : 1 - 553 (553/617)
  1 exon
  identity = 0.998
  3'(0.998)5'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 31
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003480)

HIX0003480
HIT000097182_03 ( BC042194 )
  (CGG triplet repeat-binding protein 1; CGG-binding protein 1; 20 kDa CGG-binding protein; p20-CGGBP DNA-binding protein;)
  genome : 88,101,165 - 88,106,459 (5,295)
  query : 1 - 5,290 (5,290/5,305)
  1 exon
  identity = 0.999
  3'(0.999)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 11, nucl 10.5, extr 8, cyto_nucl 8
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003480)

HIX0003480
HIT000481584 ( ENST00000398392 )
  (CGG triplet repeat-binding protein 1; CGG-binding protein 1; 20 kDa CGG-binding protein; p20-CGGBP DNA-binding protein;)
  genome : 88,101,162 - 88,106,459 (5,298)
  query : 1 - 5,298 (5,298/5,298)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 11, nucl 10.5, extr 8, cyto_nucl 8
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003480)

HIX0003480
HIT000024554 ( AL117392 )
  (CGG triplet repeat-binding protein 1.)
  genome : 88,101,274 - 88,108,091 (6,818)
  query : 1 - 4,206 (4,206/4,279)
  3 exons
  identity = 0.996
  3'(0.996;0.990;0.992)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 11, nucl 10.5, extr 8, cyto_nucl 8
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003480)

HIX0003480
HIT000243799 ( AJ000258 )
  (CGG triplet repeat-binding protein 1; CGG-binding protein 1; 20 kDa CGG-binding protein; p20-CGGBP DNA-binding protein;)
  genome : 88,104,564 - 88,107,231 (2,668)
  query : 9 - 759 (751/779)
  3 exons
  identity = 1.000
  3'(1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 11, nucl 10.5, extr 8, cyto_nucl 8
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003480)

HIX0003480
HIT000032300 ( BC005222 )
  (CGG triplet repeat-binding protein 1; CGG-binding protein 1; 20 kDa CGG-binding protein; p20-CGGBP DNA-binding protein;)
  genome : 88,104,580 - 88,199,035 (94,456)
  query : 1 - 1,059 (1,059/1,090)
  4 exons
  identity = 0.999
  3'(0.998;1.000;1.000;1.000)5'
  coverage = 0.998
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 11, nucl 10.5, extr 8, cyto_nucl 8
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003480)

HIX0003480
HIT000585967 ( ENST00000482016 )
  (CGG triplet repeat-binding protein 1; CGG-binding protein 1; 20 kDa CGG-binding protein; p20-CGGBP DNA-binding protein;)
  genome : 88,104,564 - 88,108,218 (3,655)
  query : 1 - 1,147 (1,147/1,147)
  4 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 11, nucl 10.5, extr 8, cyto_nucl 8
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003480)

HIX0003480
HIT000567717 ( ENST00000462901 )
  (CGG triplet repeat-binding protein 1; CGG-binding protein 1; 20 kDa CGG-binding protein; p20-CGGBP DNA-binding protein;)
  genome : 88,104,576 - 88,199,035 (94,460)
  query : 1 - 1,063 (1,063/1,063)
  4 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 11, nucl 10.5, extr 8, cyto_nucl 8
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003480)

HIX0003480
HIT000267704 ( CR456854 )
  (CGG triplet repeat-binding protein 1; CGG-binding protein 1; 20 kDa CGG-binding protein; p20-CGGBP DNA-binding protein;)
  genome : 88,104,625 - 88,105,126 (502)
  query : 1 - 502 (502/504)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 0.996
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 11, nucl 10.5, extr 8, cyto_nucl 8
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003480)

HIX0003480
HIT000571948 ( ENST00000467332 )
  (CGG triplet repeat-binding protein 1.)
  genome : 88,104,808 - 88,198,965 (94,158)
  query : 1 - 556 (556/556)
  3 exons
  identity = 1.000
  3'(1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 12, mito 10, nucl 9.5, cyto_nucl 5.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003480)

HIX0003480
HIT000578732 ( ENST00000474441 )
  (Hypothetical short protein.)
  genome : 88,106,788 - 88,108,095 (1,308)
  query : 1 - 717 (717/717)
  2 exons
  identity = 1.000
  3'(1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0003480)

HIX0204369
HIT000577478 ( ENST00000473136 )
  (Conserved hypothetical protein.)
  genome : 88,108,424 - 88,184,648 (76,225)
  query : 1 - 1,377 (1,377/1,377)
  7 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    plas 15, mito 7, extr 4, E.R._mito 4, mito_pero 4
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0204369)

HIX0204611
HIT000573036 ( ENST00000468470 )
  (Chromo shadow domain containing protein.)
  genome : 88,144,558 - 88,145,118 (561)
  query : 1 - 561 (561/561)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 23, extr 4, mito 4
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0204611)

HIX0031006
HIT000250396 ( AL357201 )
  Representative transcript
  (Non-protein coding transcript.)
  genome : 88,177,247 - 88,177,870 (624)
  query : 1 - 625 (625/625)
  1 exon
  identity = 0.997
  5'(0.997)3'
  coverage = 1.000
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0031006)

HIX0204369
HIT000601680 ( ENST00000498458 )
  (Conserved hypothetical protein.)
  genome : 88,178,081 - 88,188,123 (10,043)
  query : 1 - 632 (632/632)
  4 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 19, cyto_nucl 12, extr 9
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0204369)

HIX0031043
HIT000089604 ( BC018424 )
  Representative transcript
  (Conserved hypothetical protein.)
  genome : 88,185,088 - 88,188,592 (3,505)
  query : 1 - 3,505 (3,505/3,519)
  1 exon
  identity = 0.999
  3'(0.999)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 14, cyto_nucl 10.5, nucl 8.5, cyto 7.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0031043)

HIX0200486
HIT000118366 ( ENST00000309495 )
  (Zinc finger protein 654;)
  genome : 88,188,254 - 88,193,815 (5,562)
  query : 1 - 4,966 (4,966/4,966)
  2 exons
  identity = 1.000
  5'(1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 31.5, cyto_nucl 16.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0200486)

HIX0200486
HIT000207113 ( NM_018293 )
  (Zinc finger protein 654;)
  genome : 88,188,262 - 88,193,814 (5,553)
  query : 1 - 4,957 (4,957/4,957)
  2 exons
  identity = 1.000
  5'(1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 31.5, cyto_nucl 16.5
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0200486)

HIX0200486
HIT000004333 ( AK001859 )
  (Zinc finger protein 654;)
  genome : 88,188,475 - 88,191,222 (2,748)
  query : 1 - 2,152 (2,152/2,152)
  2 exons
  identity = 0.997
  5'(0.998;0.993)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0200486)

HIX0200486
HIT000008069 ( AK024795 )
  (Zinc finger protein 654;)
  genome : 88,189,599 - 88,191,435 (1,837)
  query : 1 - 1,242 (1,242/1,258)
  2 exons
  identity = 0.998
  5'(0.998;0.997)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 17.5, cyto_nucl 13, cyto 7.5, extr 5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0200486)

HIX0019911
HIT000215103 ( NM_173824 )
  (Uncharacterized protein C3orf38;)
  genome : 88,198,893 - 88,207,114 (8,222)
  query : 1 - 2,630 (2,630/2,782)
  3 exons
  identity = 0.999
  5'(0.993;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 17.5, cyto_nucl 16, nucl 11.5
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0019911)

HIX0019911
HIT000121847 ( ENST00000318887 )
  (Uncharacterized protein C3orf38;)
  genome : 88,198,893 - 88,207,118 (8,226)
  query : 1 - 2,633 (2,633/2,633)
  3 exons
  identity = 1.000
  5'(1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 17.5, cyto_nucl 16, nucl 11.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0019911)

HIX0019911
HIT000039758 ( BC024188 )
  (Uncharacterized protein C3orf38;)
  genome : 88,199,109 - 88,206,068 (6,960)
  query : 1 - 1,368 (1,368/1,382)
  3 exons
  identity = 0.998
  5'(0.996;1.000;0.998)3'
  coverage = 1.000
  InterPro :
    IPR026698 : Uncharacterised protein C3orf38 (DUF4518)
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 17.5, cyto_nucl 16, nucl 11.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0019911)

HIX0019911
HIT000492343 ( AK297719 )
  (Uncharacterized protein C3orf38;)
  genome : 88,199,137 - 88,206,094 (6,958)
  query : 1 - 1,260 (1,260/1,260)
  3 exons
  identity = 0.998
  5'(0.995;1.000;0.998)3'
  coverage = 1.000
  InterPro :
    IPR026698 : Uncharacterised protein C3orf38 (DUF4518)
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 19.5, cyto_nucl 14.5, nucl 8.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0019911)

HIX0019911
HIT000590693 ( ENST00000486971 )
  (Uncharacterized protein C3orf38;)
  genome : 88,199,137 - 88,206,094 (6,958)
  query : 1 - 1,259 (1,259/1,259)
  3 exons
  identity = 1.000
  5'(1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 19.5, cyto_nucl 14.5, nucl 8.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0019911)

HIX0019911
HIT000432413 ( AK313547 )
  (Uncharacterized protein C3orf38;)
  genome : 88,199,152 - 88,205,785 (6,634)
  query : 1 - 1,042 (1,042/1,042)
  3 exons
  identity = 0.999
  5'(0.995;1.000;1.000)3'
  coverage = 1.000
  InterPro :
    IPR026698 : Uncharacterised protein C3orf38 (DUF4518)
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 17.5, cyto_nucl 16, nucl 11.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0019911)

HIX0019911
HIT000569639 ( ENST00000464919 )
  (Uncharacterized protein C3orf38;)
  genome : 88,199,754 - 88,202,496 (2,743)
  query : 1 - 586 (586/586)
  2 exons
  identity = 1.000
  5'(1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 24.5, mito_pero 13.5, nucl 2.5, cyto_nucl 2.5,
    extr 2
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0019911)

HIX0019911
HIT000589038 ( ENST00000485219 )
  (Hypothetical short protein.)
  genome : 88,206,039 - 88,217,879 (11,841)
  query : 1 - 433 (433/433)
  2 exons
  identity = 1.000
  5'(1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 21, nucl 6, cyto 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0019911)

HIX0031039
HIT000088897 ( BC016013 )
  Representative transcript
  (Conserved hypothetical protein.)
  genome : 88,214,246 - 88,215,617 (1,372)
  query : 1 - 1,371 (1,371/1,400)
  1 exon
  identity = 0.996
  5'(0.996)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 23.5, cyto_nucl 12.5, extr 8
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0031039)

HIX0182944
HIT000570374 ( ENST00000465687 )
  (ABC transporter-like domain containing protein.)
  genome : 88,366,306 - 88,368,172 (1,867)
  query : 1 - 1,867 (1,867/1,867)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 15, extr 13, nucl 2, mito 2, mito_nucl 2
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0182944)

HIX0182944
pHIT000101524 ( pHIT000101524 )
  Representative transcript
  (Conserved hypothetical protein.)
  genome : 88,367,909 - 88,449,012 (81,104)
  query : 1 - 447 (447/447)
  3 exons
  SOSUI :
    SOLUBLE PROTEIN
  JIGSAW prediction
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0182944)
  CAGE tag :
    T03F05457BC6
  Ortholog candidate  ( -> Evola )
    Danio sp. (Zebrafish) : BC047181
    Tetraodon sp. (Tetraodon) : CR710961
    Pongo sp. (Orangutan) : CR857409
    Takifugu sp. (Fugu) : SINFRUT00000142556
    Macaca sp. (Macaque) : XR_009811

HIX0182944
eHIT000015698 ( ESTsASS_3_1 )
  (Non-protein coding transcript.)
  genome : 88,387,617 - 88,448,934 (61,318)
  query : 1 - 480 (480/480)
  3 exons
  ESTs assembly
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0182944)
  ESTs used for assembly :
    DB081936

HIX0215796
HIT000481589 ( ENST00000398399 )
  (Vestigial/tondu family protein.)
  genome : 86,987,119 - 87,040,257 (53,139)
  query : 1 - 10,400 (10,400/10,400)
  4 exons
  identity = 1.000
  3'(1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 21, cyto_nucl 14.5, cyto 6, extr 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0215796)

HIX0215796
HIT000317313 ( NM_016206 )
  (Vestigial/tondu family protein.)
  genome : 86,987,123 - 87,040,257 (53,135)
  query : 1 - 10,396 (10,396/10,396)
  4 exons
  identity = 1.000
  3'(1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 21, cyto_nucl 14.5, cyto 6, extr 3
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0215796)

bases per tick : kb first site :
main : All Human Genes JIGSAW prediction ESTs assembly
homology : UCSC CCDS Pseudogene.org Conserved regions ( Segmental duplication P.troglodytes P.abelii M.mulatta M.musculus R.norvegicus C.familiaris E.caballus B.taurus M.domestica G.gallus D.rerio O.latipes T.nigroviridis T.rubripes )
gene prediction : FGENESH GenScan HMMgene tRNA
show... : SNPs ESTs(summary) ESTs(detail) CAGE tag(summary) CAGE tag(detail)
sequence viewer : = ( , )