Clickable map CGI

HIX0215672
HIT000596450 ( ENST00000492990 )
  (Conserved hypothetical protein.)
  genome : 79,561,955 - 79,639,092 (77,138)
  query : 1 - 444 (444/444)
  5 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 29
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0215672)

HIX0120064
HIT000484161 ( ENST00000401297 )
  (Non-protein coding transcript.)
  genome : 79,633,742 - 79,633,834 (93)
  query : 1 - 93 (93/93)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0120064)

HIX0204862
HIT000594113 ( ENST00000490557 )
  (High mobility group box domain containing protein.)
  genome : 80,006,716 - 80,007,292 (577)
  query : 1 - 577 (577/577)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 8, cyto 8, mito 7, cyto_nucl 7
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0204862)

HIX0204675
HIT000578515 ( ENST00000474219 )
  (RNA recognition motif domain containing protein.)
  genome : 80,265,411 - 80,266,384 (974)
  query : 1 - 974 (974/974)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 28, nucl 2
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0204675)

HIX0204952
HIT000601842_02 ( ENST00000498629 )
  (Hypothetical protein.)
  genome : 80,491,231 - 80,491,455 (225)
  query : 1 - 225 (225/225)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cysk 13, extr 8, cyto 8
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0204952)

HIX0017279
HIT000013355 ( AK056741 )
  Representative transcript
  (Conserved hypothetical protein.)
  genome : 80,620,433 - 80,622,210 (1,778)
  query : 1 - 1,777 (1,777/1,777)
  1 exon
  identity = 0.998
  3'(0.998)5'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 20, mito 9
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0017279)

HIX0024532
HIT000056991 ( BX648344 )
  Representative transcript
  (Conserved hypothetical protein.)
  genome : 80,701,776 - 80,706,121 (4,346)
  query : 1 - 4,346 (4,346/4,364)
  1 exon
  identity = 0.998
  5'(0.998)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 28, nucl 4
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0024532)

HIX0204755
HIT000585954 ( ENST00000482003 )
  (Conserved hypothetical protein.)
  genome : 80,810,193 - 80,838,114 (27,922)
  query : 1 - 403 (403/403)
  3 exons
  identity = 1.000
  3'(1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 23, cyto 4, nucl 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0204755)

HIX0204670
HIT000578246 ( ENST00000473938 )
  (Conserved hypothetical protein.)
  genome : 80,814,048 - 80,838,505 (24,458)
  query : 1 - 712 (712/712)
  5 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 14.5, cyto_nucl 12, cyto_plas 10, extr 8, pero 2,
    lyso 2
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0204670)

HIX0204354
HIT000586542 ( ENST00000482617 )
  (Hypothetical short protein.)
  genome : 81,043,019 - 81,144,798 (101,780)
  query : 1 - 596 (596/596)
  2 exons
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0204354)

HIX0215781
HIT000199813 ( NM_002941 )
  (Roundabout homolog 1; Deleted in U twenty twenty; H-Robo-1; Precursor;)
  genome : 78,646,388 - 79,817,059 (1,170,672)
  query : 1 - 6,839 (6,839/6,895)
  31 exons
  identity = 0.999
  3'(1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 12, extr_plas 11, plas 8, E.R. 4, nucl 3, cyto 3,
    cyto_nucl 3
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0215781)

HIX0215781
HIT000568994 ( ENST00000464233 )
  (Roundabout homolog 1; Deleted in U twenty twenty; H-Robo-1; Precursor;)
  genome : 78,646,391 - 79,639,112 (992,722)
  query : 64 - 6,742 (6,679/6,742)
  30 exons
  identity = 0.999
  3'(1.000)5'
  coverage = 0.991
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 12, extr_plas 11, plas 8, E.R. 4, nucl 3, cyto 3,
    cyto_nucl 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0215781)

HIX0215781
HIT000063633 ( AF040990 )
  Representative transcript
  (Roundabout homolog 1; Deleted in U twenty twenty; H-Robo-1; Precursor;)
  genome : 78,649,257 - 79,639,061 (989,805)
  query : 1 - 4,947 (4,947/4,956)
  29 exons
  identity = 0.999
  3'(1.000)5'
  coverage = 0.998
  InterPro :
    IPR003598 : Immunoglobulin subtype 2
    IPR003961 : Fibronectin type III
    IPR013098 : Immunoglobulin I-set
  GO :
    0005515 : Molecular Function : protein binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 12, extr_plas 11, plas 8, E.R. 4, nucl 3, cyto 3,
    cyto_nucl 3
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0215781)
  Ortholog candidate  ( -> Evola )
    Rattus sp. (Rat) : AF041082
    Danio sp. (Zebrafish) : AF304131
    Gallus sp. (Chicken) : BX931132
    Equus sp. (Horse) : ENSECAT00000019469
    Oryzias sp. (Medaka) : ENSORLT00000005166
    Pongo sp. (Orangutan) : ENSPPYT00000015850
    Pan sp. (Chimpanzee) : ENSPTRT00000028283
    Tetraodon sp. (Tetraodon) : GSTENT00030144001
    Takifugu sp. (Fugu) : SINFRUT00000166214
    Monodelphis sp. (Opossum) : XM_001377717
    Canis sp. (Dog) : XM_544814
    Bos sp. (Cow) : XM_616959
    Macaca sp. (Macaque) : XR_014817
    Mus sp. (Mouse) : Y17793

HIX0215781
HIT000492105 ( AK297481 )
  (Roundabout homolog 2; Precursor;)
  genome : 78,655,986 - 79,816,715 (1,160,730)
  query : 2 - 1,108 (1,107/1,108)
  7 exons
  identity = 1.000
  3'(1.000;1.000)5'
  coverage = 0.999
  InterPro :
    IPR003598 : Immunoglobulin subtype 2
    IPR013098 : Immunoglobulin I-set
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 25, mito 3, lyso 2
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0215781)

bases per tick : kb first site :
main : All Human Genes JIGSAW prediction ESTs assembly
homology : UCSC CCDS Pseudogene.org Conserved regions ( Segmental duplication P.troglodytes P.abelii M.mulatta M.musculus R.norvegicus C.familiaris E.caballus B.taurus M.domestica G.gallus D.rerio O.latipes T.nigroviridis T.rubripes )
gene prediction : FGENESH GenScan HMMgene tRNA
show... : SNPs ESTs(summary) ESTs(detail) CAGE tag(summary) CAGE tag(detail)
sequence viewer : = ( , )