bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0175745
HIT000726221 (
NR_044991
)
(Conserved hypothetical protein.)
genome : 45,002,208 - 45,021,299 (19,092)
query : 1 - 826 (826/826)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto 7, extr 5, cyto_pero 5, nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175745)
HIX0175745
HIT000541717 (
ENST00000443783
)
(Conserved hypothetical protein.)
genome : 45,002,819 - 45,021,299 (18,481)
query : 1 - 500 (500/500)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto 7, extr 5, cyto_pero 5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175745)
HIX0175429
HIT000552459 (
ENST00000454525
)
(Leucine-rich repeat containing protein.)
genome : 45,047,715 - 45,048,259 (545)
query : 1 - 545 (545/545)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 13, extr 10, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175429)
HIX0227278
HIT000257909
(
AY859540
)
Representative transcript
(Non-protein coding transcript.)
genome : 45,064,427 - 45,064,592 (166)
query : 1 - 166 (166/166)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227278)
HIX0227305
HIT000564808 (
ENST00000459857
)
(HbrB-like family protein.)
genome : 45,072,965 - 45,125,288 (52,324)
query : 1 - 560 (560/560)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 14, cyto 10, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227305)
HIX0227124
HIT000002667
(
AK000192
)
Representative transcript
(Proline-rich protein 5; Protein observed with Rictor-1; Protor-1;)
genome : 45,126,953 - 45,133,560 (6,608)
query : 1 - 1,935 (1,935/1,956)
4 exons
identity = 0.997
5'(1.000;0.993;1.000;0.996)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 15, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227124)
HIX0227124
HIT000013401
(
AK056787
)
(Proline-rich protein 5; Protein observed with Rictor-1; Protor-1;)
genome : 45,129,988 - 45,133,561 (3,574)
query : 1 - 1,964 (1,964/1,964)
2 exons
identity = 0.997
5'(0.998;0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 15.5, cyto 8, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227124)
HIX0227124
HIT000580071 (
ENST00000475850
)
(Conserved hypothetical protein.)
genome : 45,129,988 - 45,133,561 (3,574)
query : 1 - 1,965 (1,965/1,965)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 15.5, cyto 8, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227124)
HIX0027876
HIT000044713
(
AK124840
)
Representative transcript
(Conserved hypothetical protein.)
genome : 45,139,832 - 45,142,347 (2,516)
query : 1 - 2,515 (2,515/2,515)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 13, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027876)
HIX0227126
HIT000318279 (
NM_181335
)
(CRAL-TRIO domain containing protein.)
genome : 45,148,438 - 45,258,664 (110,227)
query : 1 - 1,632 (1,632/1,632)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 14, nucl 4, mito 3, pero 2, cysk 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227126)
HIX0227126
HIT000365506 (
NM_001017526
)
(CRAL-TRIO domain containing protein.)
genome : 45,148,438 - 45,258,664 (110,227)
query : 1 - 1,725 (1,725/1,725)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 18.5, nucl 8.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227126)
HIX0227126
HIT000396668 (
ENST00000389774
)
(CRAL-TRIO domain containing protein.)
genome : 45,148,438 - 45,258,664 (110,227)
query : 1 - 1,725 (1,725/1,725)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 18.5, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227126)
HIX0227126
HIT000656280 (
NM_001198726
)
(CRAL-TRIO domain containing protein.)
genome : 45,148,438 - 45,258,664 (110,227)
query : 1 - 1,528 (1,528/1,528)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 16, nucl 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227126)
HIX0227126
HIT000003780
(
AK001306
)
Representative transcript
(Rho GTPase-activating protein 8; Rho-type GTPase-activating protein 8;)
genome : 45,148,438 - 45,258,592 (110,155)
query : 1 - 1,653 (1,653/1,653)
13 exons
identity = 0.998
5'(1.000;1.000;0.989;1.000;1.000;1.000;1.000;
0.991;1.000;1.000;1.000;0.990;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 18.5, nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227126)
HIX0227126
HIT000259982
(
BC059382
)
(Rho GTPase-activating protein 8 isoform 3.)
genome : 45,148,454 - 45,246,844 (98,391)
query : 1 - 2,906 (2,906/2,921)
10 exons
identity = 0.998
5'(1.000;1.000;0.989;1.000;1.000;1.000;0.991;
1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR000198 : Rho GTPase-activating protein domain
IPR001251 : CRAL-TRIO domain
IPR008936 : Rho GTPase activation protein
GO :
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, cyto_nucl 16.3333, cyto_pero 13.5, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227126)
HIX0227126
HIT000565724 (
ENST00000460809
)
(CRAL-TRIO domain containing protein.)
genome : 45,148,454 - 45,246,843 (98,390)
query : 1 - 2,905 (2,905/2,905)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 8.5, cyto_nucl 8.5, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227126)
HIX0227126
HIT000545267 (
ENST00000447333
)
(CRAL-TRIO domain containing protein.)
genome : 45,148,466 - 45,221,471 (73,006)
query : 1 - 768 (768/768)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 15, extr 7, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227126)
HIX0227126
HIT000479472 (
ENST00000396119
)
(CRAL-TRIO domain containing protein.)
genome : 45,148,466 - 45,204,978 (56,513)
query : 1 - 573 (573/573)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 14, nucl 10, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227126)
HIX0227126
HIT000130304 (
ENST00000336963
)
(CRAL-TRIO domain containing protein.)
genome : 45,148,483 - 45,258,665 (110,183)
query : 1 - 1,484 (1,484/1,484)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 16, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227126)
HIX0227126
HIT000262792
(
BC067824
)
(Rho GTPase-activating protein 8; Rho-type GTPase-activating protein 8;)
genome : 45,148,483 - 45,258,583 (110,101)
query : 1 - 1,402 (1,402/1,417)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR000198 : Rho GTPase-activating protein domain
IPR001251 : CRAL-TRIO domain
IPR008936 : Rho GTPase activation protein
GO :
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 16, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227126)
HIX0227126
HIT000510367 (
ENST00000412433
)
(CRAL-TRIO domain containing protein.)
genome : 45,148,585 - 45,210,598 (62,014)
query : 1 - 581 (581/581)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 17, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227126)
HIX0227126
HIT000574371 (
ENST00000469872
)
(Hypothetical short protein.)
genome : 45,161,109 - 45,182,388 (21,280)
query : 1 - 548 (548/548)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 12.5, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227126)
HIX0041323
HIT000264602
(
BC071783
)
Representative transcript
(Conserved hypothetical protein.)
genome : 45,176,925 - 45,178,217 (1,293)
query : 1 - 1,292 (1,292/1,320)
1 exon
identity = 0.973
5'(0.973)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041323)
HIX0227126
HIT000098948
(
BC048280
)
(Rho GTPase-activating protein 8 isoform 3.)
genome : 45,182,334 - 45,258,616 (76,283)
query : 20 - 1,534 (1,515/1,620)
11 exons
identity = 0.995
5'(1.000;0.989;1.000;0.989;1.000;1.000;1.000;
1.000;0.992;0.990;0.994)3'
coverage = 0.987
InterPro :
IPR000198 : Rho GTPase-activating protein domain
IPR001251 : CRAL-TRIO domain
IPR008936 : Rho GTPase activation protein
GO :
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 14, nucl 4, mito 3, pero 2, cysk 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227126)
HIX0227126
HIT000310149 (
ENST00000356099
)
(CRAL-TRIO domain containing protein.)
genome : 45,182,334 - 45,258,664 (76,331)
query : 20 - 1,584 (1,565/1,584)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 0.988
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 14, nucl 4, mito 3, pero 2, cysk 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227126)
HIX0227126
HIT000005579
(
AK022305
)
(Rho GTPase-activating protein 8 isoform 3.)
genome : 45,182,334 - 45,246,843 (64,510)
query : 10 - 2,863 (2,854/2,863)
9 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.995)3'
coverage = 0.997
InterPro :
IPR000198 : Rho GTPase-activating protein domain
IPR001251 : CRAL-TRIO domain
IPR008936 : Rho GTPase activation protein
GO :
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, cyto_nucl 16.3333, cyto_pero 13.5, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227126)
HIX0227126
HIT000087495
(
BC010490
)
(Rho GTPase-activating protein 1; CDC42 GTPase-activating protein; GTPase-activating protein rhoOGAP; Rho-related small GTPase protein activator; Rho-type GTPase-activating protein 1; p50-RhoGAP;)
genome : 45,182,335 - 45,258,663 (76,329)
query : 1 - 1,475 (1,475/1,491)
10 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.992;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR000198 : Rho GTPase-activating protein domain
IPR001251 : CRAL-TRIO domain
IPR008936 : Rho GTPase activation protein
GO :
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 14.5, nucl 7.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227126)
HIX0227126
HIT000396666 (
ENST00000389772
)
(CRAL-TRIO domain containing protein.)
genome : 45,182,337 - 45,258,664 (76,328)
query : 1 - 1,474 (1,474/1,474)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 14.5, nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227126)
HIX0227126
HIT000081489
(
AF544240
)
(CRAL-TRIO domain containing protein.)
genome : 45,182,408 - 45,258,475 (76,068)
query : 1 - 1,302 (1,302/1,302)
11 exons
identity = 0.998
5'(1.000;1.000;1.000;0.989;1.000;1.000;1.000;
1.000;1.000;0.981;1.000)3'
coverage = 1.000
InterPro :
IPR000198 : Rho GTPase-activating protein domain
IPR001251 : CRAL-TRIO domain
IPR008936 : Rho GTPase activation protein
GO :
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 14.5, nucl 4.5, cysk 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227126)
HIX0227126
HIT000598588 (
ENST00000495219
)
(CRAL-TRIO domain containing protein.)
genome : 45,182,432 - 45,204,689 (22,258)
query : 1 - 646 (646/646)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 4.5, cyto_nucl 4.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227126)
HIX0227126
HIT000601536 (
ENST00000498310
)
(CRAL-TRIO domain containing protein.)
genome : 45,197,700 - 45,221,431 (23,732)
query : 1 - 732 (732/732)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, mito 10, cyto 6, extr 3, cyto_plas 3,
cyto_golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227126)
HIX0227126
HIT000573867 (
ENST00000469342
)
(Rho GTPase-activating protein domain containing protein.)
genome : 45,255,541 - 45,258,343 (2,803)
query : 1 - 363 (363/363)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 15.5, cyto 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227126)
HIX0227126
HIT000334650
(
BC093675
)
(Rho GTPase-activating protein domain containing protein.)
genome : 45,255,655 - 45,258,524 (2,870)
query : 1 - 430 (430/430)
2 exons
identity = 0.998
5'(1.000;0.997)3'
coverage = 1.000
InterPro :
IPR000198 : Rho GTPase-activating protein domain
IPR008936 : Rho GTPase activation protein
GO :
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 11, cyto_nucl 4, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227126)
HIX0227126
HIT000340082
(
BC111953
)
(Rho GTPase-activating protein domain containing protein.)
genome : 45,255,655 - 45,258,521 (2,867)
query : 1 - 427 (427/427)
2 exons
identity = 0.998
5'(1.000;0.997)3'
coverage = 1.000
InterPro :
IPR000198 : Rho GTPase-activating protein domain
IPR008936 : Rho GTPase activation protein
GO :
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 11, cyto_nucl 4, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227126)
HIX0016571
HIT000035723
(
BC012187
)
Representative transcript
(PHD finger protein 21B;)
genome : 45,277,042 - 45,405,581 (128,540)
query : 1 - 3,672 (3,672/3,694)
13 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR001965 : Zinc finger, PHD-type
IPR011011 : Zinc finger, FYVE/PHD-type
IPR019787 : Zinc finger, PHD-finger
GO :
0005515 : Molecular Function : protein binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 16, cyto 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016571)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC067021
Bos
sp. (Cow) : ENSBTAT00000009165
Macaca
sp. (Macaque) : ENSMMUT00000002234
Oryzias
sp. (Medaka) : ENSORLT00000017903
Pongo
sp. (Orangutan) : ENSPPYT00000013852
Pan
sp. (Chimpanzee) : ENSPTRT00000027083
Rattus
sp. (Rat) : ENSRNOT00000017906
Monodelphis
sp. (Opossum) : XM_001362643
Equus
sp. (Horse) : XM_001488104
Gallus
sp. (Chicken) : XM_425507
Canis
sp. (Dog) : XM_846360
HIX0016571
HIT000560213 (
NM_001135862
)
(PHD finger protein 21B;)
genome : 45,277,042 - 45,405,809 (128,768)
query : 1 - 3,500 (3,500/3,500)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 15.8333, cyto 14,
cyto_golg 7.83333
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016571)
HIX0016571
HIT000119663 (
ENST00000313237
)
(PHD finger protein 21B;)
genome : 45,277,042 - 45,405,581 (128,540)
query : 1 - 3,671 (3,671/3,671)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 16, cyto 15
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016571)
HIX0016571
HIT000212382 (
NM_138415
)
(PHD finger protein 21B;)
genome : 45,277,042 - 45,405,581 (128,540)
query : 1 - 3,671 (3,671/3,671)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 16, cyto 15
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016571)
HIX0016571
HIT000504533 (
ENST00000403565
)
(PHD finger protein 21B isoform 3.)
genome : 45,277,042 - 45,404,874 (127,833)
query : 1 - 3,586 (3,586/3,586)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 14, nucl 10.5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016571)
HIX0016571
HIT000657559 (
NM_001242450
)
(PHD finger protein 21B isoform 3.)
genome : 45,277,042 - 45,404,874 (127,833)
query : 1 - 3,540 (3,540/3,540)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 16, cyto 11
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016571)
HIX0016571
HIT000017110
(
AK092243
)
(PHD finger protein 21B;)
genome : 45,277,045 - 45,405,497 (128,453)
query : 40 - 3,498 (3,459/3,498)
13 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.997;0.989;1.000;1.000)5'
coverage = 0.989
InterPro :
IPR001965 : Zinc finger, PHD-type
IPR011011 : Zinc finger, FYVE/PHD-type
IPR019787 : Zinc finger, PHD-finger
GO :
0005515 : Molecular Function : protein binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 15.8333, cyto 14,
cyto_golg 7.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016571)
HIX0016571
HIT000479456 (
ENST00000396103
)
(PHD finger protein 21B;)
genome : 45,277,045 - 45,405,499 (128,455)
query : 1 - 3,460 (3,460/3,460)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 15.8333, cyto 14,
cyto_golg 7.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016571)
HIX0016571
HIT000016347
(
AK091480
)
(PHD finger protein 21B isoform 3.)
genome : 45,277,045 - 45,404,874 (127,830)
query : 1 - 3,584 (3,584/3,584)
14 exons
identity = 0.997
3'(0.999;1.000;1.000;0.994;1.000;1.000;1.000;
1.000;1.000;0.991;0.989;0.978;0.985;0.995)5'
coverage = 1.000
InterPro :
IPR001965 : Zinc finger, PHD-type
IPR011011 : Zinc finger, FYVE/PHD-type
IPR019787 : Zinc finger, PHD-finger
GO :
0005515 : Molecular Function : protein binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 14, nucl 10.5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016571)
HIX0016571
HIT000020632
(
AK095777
)
(PHD finger protein 21B isoform 3.)
genome : 45,277,045 - 45,289,415 (12,371)
query : 14 - 2,651 (2,638/2,651)
7 exons
identity = 0.996
3'(0.995;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.995
InterPro :
IPR001965 : Zinc finger, PHD-type
IPR011011 : Zinc finger, FYVE/PHD-type
IPR019787 : Zinc finger, PHD-finger
GO :
0005515 : Molecular Function : protein binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 6, nucl 4, cyto_mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016571)
HIX0016571
HIT000491941
(
AK297317
)
(PHD finger protein 21B isoform 3.)
genome : 45,278,761 - 45,404,867 (126,107)
query : 1 - 1,814 (1,814/1,814)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001965 : Zinc finger, PHD-type
IPR011011 : Zinc finger, FYVE/PHD-type
IPR019787 : Zinc finger, PHD-finger
GO :
0005515 : Molecular Function : protein binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 16, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016571)
HIX0016571
HIT000504713 (
ENST00000404079
)
(PHD finger protein 21B isoform 3.)
genome : 45,278,761 - 45,404,867 (126,107)
query : 1 - 1,814 (1,814/1,814)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 16, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016571)
HIX0016571
HIT000267382
(
CR456448
)
(PHD finger protein 21B;)
genome : 45,278,822 - 45,405,463 (126,642)
query : 1 - 1,647 (1,647/1,647)
13 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.997;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001965 : Zinc finger, PHD-type
IPR011011 : Zinc finger, FYVE/PHD-type
IPR019787 : Zinc finger, PHD-finger
GO :
0005515 : Molecular Function : protein binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 15.8333, cyto 14,
cyto_golg 7.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016571)
HIX0016571
HIT000494460
(
AK299836
)
(PHD finger protein 21B isoform 3.)
genome : 45,283,924 - 45,404,830 (120,907)
query : 1 - 1,069 (1,069/1,069)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016571)
HIX0016571
HIT000545758 (
ENST00000447824
)
(PHD finger protein 21B isoform 3.)
genome : 45,283,924 - 45,404,830 (120,907)
query : 1 - 1,069 (1,069/1,069)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016571)
HIX0016571
HIT000512203 (
ENST00000414269
)
(PHD finger protein 21B isoform 1.)
genome : 45,287,186 - 45,405,880 (118,695)
query : 1 - 547 (547/557)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.982
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto 13, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016571)
HIX0041300
HIT000095078
(
BC037979
)
Representative transcript
(60S ribosomal protein L6E family protein.)
genome : 45,297,427 - 45,298,345 (919)
query : 1 - 919 (919/985)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
InterPro :
IPR000915 : 60S ribosomal protein L6E
GO :
0003735 : Molecular Function : structural constituent of ribosome
0005622 : Cellular Component : intracellular
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 13, cyto 8.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041300)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : XR_013690
HIX0041300
HIT000528970 (
ENST00000431036
)
(60S ribosomal protein L6E family protein.)
genome : 45,297,427 - 45,298,351 (925)
query : 1 - 925 (925/925)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 13, cyto 8.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041300)
HIX0041300
HIT000554159 (
ENST00000456225
)
(60S ribosomal protein L6E family protein.)
genome : 45,297,472 - 45,298,310 (839)
query : 1 - 839 (839/839)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 13, cyto 8.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041300)
HIX0016571
HIT000518623 (
ENST00000420689
)
(PHD finger protein 21B isoform 3.)
genome : 45,309,796 - 45,404,867 (95,072)
query : 1 - 750 (750/750)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 9.5, nucl 9, mito 9, cyto 8, extr 5,
mito_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016571)
HIX0016571
HIT000594226 (
ENST00000490679
)
(PHD finger protein 21B isoform 3.)
genome : 45,312,201 - 45,405,202 (93,002)
query : 1 - 553 (553/553)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, nucl 4, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016571)
HIX0016571
HIT000565433 (
ENST00000460507
)
(PHD finger protein 21B isoform 2.)
genome : 45,312,335 - 45,364,963 (52,629)
query : 1 - 508 (508/508)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, nucl 15, cyto 15
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016571)
HIX0016571
HIT000578621 (
ENST00000474327
)
(PHD finger protein 21B isoform 2.)
genome : 45,312,475 - 45,405,473 (92,999)
query : 1 - 338 (338/338)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 10.5, cyto_nucl 9.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016571)
HIX0197647
pHIT000037471 ( pHIT000037471 )
Representative transcript
(Hypothetical short protein.)
genome : 45,361,711 - 45,380,755 (19,045)
query : 1 - 183 (183/183)
2 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0197647)
CAGE tag :
H40BC38F0114
HIX0016571
HIT000567456 (
ENST00000462631
)
(Conserved hypothetical protein.)
genome : 45,364,868 - 45,367,350 (2,483)
query : 1 - 749 (749/749)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, mito_nucl 13.3333, cyto_nucl 9.16667,
mito 9, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016571)
HIX0022562
HIT000001377
(
AB051448
)
Representative transcript
(Conserved hypothetical protein.)
genome : 45,373,648 - 45,380,143 (6,496)
query : 1 - 6,475 (6,475/6,475)
1 exon
identity = 0.993
5'(0.993)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 9.5, cyto_nucl 7.5, mito 6.5, nucl 4.5,
E.R._mito 4.5, extr_plas 4, plas 3.5, extr 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022562)
HIX0016571
HIT000598715 (
ENST00000495348
)
(Non-protein coding transcript.)
genome : 45,385,002 - 45,405,428 (20,427)
query : 1 - 528 (528/528)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016571)
HIX0016572
HIT000018377
(
AK093510
)
Representative transcript
(Conserved hypothetical protein.)
genome : 45,396,446 - 45,399,500 (3,055)
query : 1 - 1,633 (1,633/1,633)
3 exons
identity = 0.999
3'(0.999;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 9, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016572)
HIX0016572
HIT000522514 (
ENST00000424580
)
(Conserved hypothetical protein.)
genome : 45,396,446 - 45,399,500 (3,055)
query : 1 - 1,633 (1,633/1,633)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, extr 12, nucl 3, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016572)
HIX0016571
HIT000595045 (
ENST00000491522
)
(PHD finger protein 21B isoform 2.)
genome : 45,404,034 - 45,405,493 (1,460)
query : 1 - 575 (575/575)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016571)
HIX0041171
HIT000725623 (
NR_038956
)
(Hypothetical short protein.)
genome : 45,529,639 - 45,559,662 (30,024)
query : 1 - 1,338 (1,338/1,338)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, extr 13, cyto_nucl 9.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041171)
HIX0041171
HIT000725624 (
NR_038957
)
(Conserved hypothetical protein.)
genome : 45,529,639 - 45,548,465 (18,827)
query : 1 - 1,313 (1,313/1,313)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, mito 7, cyto 5.5, cyto_pero 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041171)
HIX0041171
HIT000524216 (
ENST00000426282
)
(Hypothetical short protein.)
genome : 45,529,710 - 45,559,662 (29,953)
query : 1 - 1,267 (1,267/1,267)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, extr 13, cyto_nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041171)
HIX0041171
HIT000097914
(
BC044653
)
Representative transcript
(Conserved hypothetical protein.)
genome : 45,530,244 - 45,548,465 (18,222)
query : 3 - 710 (708/845)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.996
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, mito 7, cyto 5.5, cyto_pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041171)
HIX0041171
HIT000530436 (
ENST00000432502
)
(Hypothetical short protein.)
genome : 45,530,171 - 45,559,540 (29,370)
query : 1 - 596 (596/596)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, mito 9, cyto_nucl 9, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041171)
HIX0016573
HIT000307498_01 (
ENST00000347635
)
(Nuclear pore complex, NUP2/50/61 domain containing protein.)
genome : 45,559,722 - 45,583,892 (24,171)
query : 1 - 5,229 (5,229/5,229)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 17, nucl 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016573)
HIX0016573
HIT000522568 (
ENST00000424634
)
(Conserved hypothetical protein.)
genome : 45,559,868 - 45,567,548 (7,681)
query : 1 - 579 (579/579)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 11, cyto_nucl 9, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016573)
HIX0016573
HIT000601207 (
ENST00000497960
)
(Nuclear pore complex, NUP2/50/61 domain containing protein.)
genome : 45,559,878 - 45,568,087 (8,210)
query : 1 - 986 (986/986)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 18, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016573)
HIX0016573
HIT000515636 (
ENST00000417702
)
(Conserved hypothetical protein.)
genome : 45,559,878 - 45,567,520 (7,643)
query : 1 - 584 (584/584)
4 exons
identity = 0.995
5'(0.993;1.000;0.994;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 7, nucl 6, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016573)
HIX0016573
HIT000523667_01 (
ENST00000425733
)
(Nuclear pore complex, NUP2/50/61 domain containing protein.)
genome : 45,559,880 - 45,581,038 (21,159)
query : 1 - 2,030 (2,030/2,030)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 16.5, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016573)
HIX0016573
HIT000566323 (
ENST00000461437
)
(Conserved hypothetical protein.)
genome : 45,559,880 - 45,566,900 (7,021)
query : 1 - 531 (531/531)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 11, cyto_nucl 9, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016573)
HIX0016573
HIT000532694 (
ENST00000434760
)
(Nuclear pore complex, NUP2/50/61 domain containing protein.)
genome : 45,559,881 - 45,571,887 (12,007)
query : 1 - 763 (763/763)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, nucl 10, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016573)
HIX0016573
HIT000543655 (
ENST00000445721
)
(Hypothetical short protein.)
genome : 45,560,489 - 45,564,088 (3,600)
query : 1 - 443 (443/443)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 8, extr 4, cyto_pero 4, cyto_plas 4,
cyto_golg 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016573)
HIX0016573
HIT000566094 (
ENST00000461194
)
(Nuclear pore complex, NUP2/50/61 domain containing protein.)
genome : 45,560,547 - 45,567,024 (6,478)
query : 1 - 550 (550/550)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016573)
HIX0016573
HIT000530274 (
ENST00000432340
)
(Hypothetical short protein.)
genome : 45,560,561 - 45,564,071 (3,511)
query : 1 - 551 (551/551)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016573)
HIX0016573
HIT000588048 (
ENST00000484186
)
(Nuclear pore complex, NUP2/50/61 domain containing protein.)
genome : 45,564,047 - 45,567,627 (3,581)
query : 14 - 431 (418/431)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.970
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016573)
HIX0016573
HIT000069960_01
(
AF116624
)
Representative transcript
(Nuclear pore complex protein Nup50; 50 kDa nucleoporin; Nuclear pore-associated protein 60 kDa-like; Nucleoporin Nup50;)
genome : 45,564,047 - 45,581,135 (17,089)
query : 6 - 2,025 (2,020/2,025)
7 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.991)3'
coverage = 0.998
InterPro :
IPR000156 : Ran binding domain
IPR015007 : Nuclear pore complex, NUP2/50/61
GO :
0005643 : Cellular Component : nuclear pore
0046907 : Biological Process : intracellular transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 17, nucl 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016573)
HIX0016573
HIT000609303_04 (
ENST00000509438
)
(Nuclear pore complex, NUP2/50/61 domain containing protein.)
genome : 45,564,047 - 45,580,554 (16,508)
query : 5 - 1,438 (1,434/1,438)
7 exons
identity = 0.985
5'(0.975;0.988;0.984;0.986;0.951;1.000;0.986)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 12.5, mito 8, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016573)
HIX0016573
HIT000602968_04 (
ENST00000502634
)
(Nuclear pore complex, NUP2/50/61 domain containing protein.)
genome : 45,564,070 - 45,580,536 (16,467)
query : 7 - 1,404 (1,398/1,404)
7 exons
identity = 0.964
5'(0.983;0.964;0.936;0.970;0.963;0.966;0.961)3'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 15.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016573)
HIX0016573
HIT000595373 (
ENST00000491860
)
(Conserved hypothetical protein.)
genome : 45,571,699 - 45,574,348 (2,650)
query : 1 - 493 (493/493)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 12, nucl 3, cyto 3, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016573)
HIX0016573
HIT000020715
(
AK095860
)
(Nuclear pore complex protein Nup50; 50 kDa nucleoporin; Nuclear pore-associated protein 60 kDa-like; Nucleoporin Nup50;)
genome : 45,573,580 - 45,581,505 (7,926)
query : 1 - 3,505 (3,505/3,505)
3 exons
identity = 0.996
5'(0.993;1.000;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 12.5, extr 5, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016573)
HIX0016573
HIT000573699 (
ENST00000469163
)
(Conserved hypothetical protein.)
genome : 45,573,580 - 45,581,505 (7,926)
query : 1 - 3,507 (3,507/3,507)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 12.5, extr 5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016573)
HIX0016573
HIT000002447
(
AF267865
)
(Hypothetical protein.)
genome : 45,581,827 - 45,583,305 (1,479)
query : 1 - 1,485 (1,485/1,485)
1 exon
identity = 0.989
5'(0.989)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016573)
HIX0016573
HIT000095732
(
BC039468
)
(Hypothetical protein.)
genome : 45,582,588 - 45,583,889 (1,302)
query : 1 - 1,299 (1,299/1,313)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016573)
HIX0016573
HIT000090051
(
BC020260
)
(Hypothetical protein.)
genome : 45,583,253 - 45,583,888 (636)
query : 1 - 636 (636/682)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 8.5, cyto 8, nucl 5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016573)
HIX0016576
HIT000129960 (
ENST00000336156
)
(Uncharacterized protein KIAA0930;)
genome : 45,588,114 - 45,636,650 (48,537)
query : 1 - 6,224 (6,224/6,224)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 14.5, cyto 9, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016576)
HIX0016576
HIT000316659 (
NM_001009880
)
(Uncharacterized protein KIAA0930;)
genome : 45,588,123 - 45,636,650 (48,528)
query : 1 - 6,215 (6,215/6,215)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 14.5, cyto 9, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016576)
HIX0016576
HIT000317241 (
NM_015264
)
(Uncharacterized protein KIAA0930;)
genome : 45,588,123 - 45,608,347 (20,225)
query : 1 - 6,287 (6,287/6,287)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, extr 6, cyto 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016576)
HIX0016576
HIT000000647
(
AB023147
)
(Uncharacterized protein KIAA0930;)
genome : 45,589,973 - 45,607,886 (17,914)
query : 1 - 4,134 (4,134/4,134)
9 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 8, plas 1, mito 1, E.R. 1, golg 1,
E.R._mito 1, E.R._golg 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016576)
HIX0016576
HIT000053933
(
BC053595
)
(Uncharacterized protein KIAA0930;)
genome : 45,591,709 - 45,622,784 (31,076)
query : 1 - 2,623 (2,623/2,740)
10 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR019141 : Protein of unknown function DUF2045
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, nucl 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016576)
HIX0016576
HIT000008882
(
AK025608
)
(Uncharacterized protein KIAA0930;)
genome : 45,591,709 - 45,601,730 (10,022)
query : 1 - 2,218 (2,218/2,234)
7 exons
identity = 0.996
3'(1.000;1.000;0.994;1.000;1.000;1.000;0.884)5'
coverage = 1.000
InterPro :
IPR019141 : Protein of unknown function DUF2045
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 13, cyto 5.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016576)
HIX0016576
HIT000089101
(
BC016882
)
(Uncharacterized protein KIAA0930;)
genome : 45,591,709 - 45,599,778 (8,070)
query : 1 - 1,959 (1,959/1,973)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR019141 : Protein of unknown function DUF2045
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 15.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016576)
HIX0016576
HIT000083043
(
AY007105
)
(Uncharacterized protein KIAA0930;)
genome : 45,591,709 - 45,595,788 (4,080)
query : 1 - 1,583 (1,583/1,590)
3 exons
identity = 0.999
3'(0.999;1.000;1.000)5'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14, extr 6, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016576)
HIX0016576
HIT000475136 (
ENST00000391627
)
(Uncharacterized protein KIAA0930;)
genome : 45,591,709 - 45,622,784 (31,076)
query : 1 - 2,623 (2,623/2,623)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, nucl 15
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016576)
HIX0016576
HIT000106224 (
ENST00000251993
)
(Uncharacterized protein KIAA0930;)
genome : 45,591,709 - 45,608,369 (16,661)
query : 1 - 2,723 (2,723/2,723)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, extr 6, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016576)
HIX0016576
HIT000521196 (
ENST00000423262
)
(Uncharacterized protein KIAA0930;)
genome : 45,591,709 - 45,601,730 (10,022)
query : 1 - 2,218 (2,218/2,218)
7 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.884)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 6, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016576)
HIX0016576
HIT000019792
(
AK094937
)
Representative transcript
(Protein of unknown function DUF2045 family protein.)
genome : 45,591,710 - 45,636,786 (45,077)
query : 1 - 2,688 (2,688/2,688)
11 exons
identity = 0.989
3'(0.982;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.991;0.953)5'
coverage = 1.000
InterPro :
IPR019141 : Protein of unknown function DUF2045
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 14.5, cyto 9, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016576)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK149782
Rattus
sp. (Rat) : BC098850
Bos
sp. (Cow) : ENSBTAT00000008911
Pongo
sp. (Orangutan) : ENSPPYT00000013854
Tetraodon
sp. (Tetraodon) : GSTENT00005040001
Takifugu
sp. (Fugu) : SINFRUT00000145204
Monodelphis
sp. (Opossum) : XM_001378385
Equus
sp. (Horse) : XM_001488167
Gallus
sp. (Chicken) : XM_416465
Canis
sp. (Dog) : XM_538331
Macaca
sp. (Macaque) : XR_013598
Pan
sp. (Chimpanzee) : XR_022988
HIX0016576
HIT000044521
(
AK124648
)
(Uncharacterized protein KIAA0930;)
genome : 45,591,710 - 45,608,355 (16,646)
query : 1 - 2,708 (2,708/2,708)
10 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR019141 : Protein of unknown function DUF2045
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, extr 6, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016576)
HIX0060084
HIT000019214
(
AK094359
)
Representative transcript
(Conserved hypothetical protein.)
genome : 45,591,710 - 45,593,863 (2,154)
query : 1 - 2,154 (2,154/2,154)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, extr 13, cyto_nucl 12, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0060084)
HIX0060084
HIT000343390
(
DQ457059
)
(Conserved hypothetical protein.)
genome : 45,591,803 - 45,592,081 (279)
query : 1 - 279 (279/279)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 13.5, cyto_nucl 11.5, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0060084)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000013855
HIX0016576
HIT000095196
(
BC038414
)
(Uncharacterized protein KIAA0930;)
genome : 45,591,919 - 45,608,265 (16,347)
query : 1 - 2,566 (2,566/2,600)
9 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.998)5'
coverage = 1.000
InterPro :
IPR019141 : Protein of unknown function DUF2045
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 15.3333, cyto 8,
cyto_golg 4.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016576)
HIX0016576
HIT000591706 (
ENST00000488038
)
(Uncharacterized protein KIAA0930;)
genome : 45,591,919 - 45,608,338 (16,420)
query : 1 - 2,639 (2,639/2,639)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 15.3333, cyto 8,
cyto_golg 4.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016576)
HIX0016576
HIT000587268 (
ENST00000483374
)
(Uncharacterized protein KIAA0930;)
genome : 45,592,583 - 45,593,914 (1,332)
query : 1 - 759 (759/759)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto_nucl 9, nucl 7.5, cyto 7.5, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016576)
HIX0016576
HIT000601641 (
ENST00000498418
)
(Uncharacterized protein KIAA0930;)
genome : 45,592,630 - 45,596,090 (3,461)
query : 1 - 964 (964/964)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, extr 10, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016576)
HIX0016576
HIT000491682
(
AK297058
)
(Uncharacterized protein KIAA0930;)
genome : 45,592,696 - 45,609,380 (16,685)
query : 4 - 1,694 (1,691/1,694)
10 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR019141 : Protein of unknown function DUF2045
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 17, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016576)
HIX0016576
HIT000578802 (
ENST00000474515
)
(Uncharacterized protein KIAA0930;)
genome : 45,592,845 - 45,598,565 (5,721)
query : 1 - 666 (666/666)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016576)
HIX0016576
HIT000427881
(
AK309015
)
(Uncharacterized protein KIAA0930;)
genome : 45,592,941 - 45,608,242 (15,302)
query : 1 - 1,521 (1,521/1,521)
9 exons
identity = 0.999
3'(1.000;1.000;0.994;1.000;1.000;1.000;1.000;
1.000;0.998)5'
coverage = 1.000
InterPro :
IPR019141 : Protein of unknown function DUF2045
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 14, cyto 4, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016576)
HIX0016576
HIT000434749
(
AK315883
)
(Uncharacterized protein KIAA0930;)
genome : 45,592,959 - 45,609,315 (16,357)
query : 1 - 1,363 (1,363/1,363)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR019141 : Protein of unknown function DUF2045
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 17, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016576)
HIX0016576
HIT000541244 (
ENST00000443310
)
(Uncharacterized protein KIAA0930;)
genome : 45,592,959 - 45,609,315 (16,357)
query : 1 - 1,363 (1,363/1,363)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 17, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016576)
HIX0016576
HIT000267336
(
CR456402
)
(Uncharacterized protein KIAA0930;)
genome : 45,592,983 - 45,636,587 (43,605)
query : 1 - 1,292 (1,292/1,292)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR019141 : Protein of unknown function DUF2045
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 14.5, cyto 9, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016576)
HIX0016576
HIT000596462 (
ENST00000493003
)
(Uncharacterized protein KIAA0930 homolog;)
genome : 45,592,987 - 45,598,596 (5,610)
query : 1 - 586 (586/586)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016576)
HIX0016576
HIT000722488
(
KC154032
)
(Uncharacterized protein KIAA0930;)
genome : 45,595,815 - 45,636,650 (40,836)
query : 1 - 1,020 (1,020/1,020)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR019141 : Protein of unknown function DUF2045
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 14.5, cyto 10, mito 2, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016576)
HIX0016576
HIT000537973 (
ENST00000440039
)
(Uncharacterized protein KIAA0930;)
genome : 45,599,012 - 45,607,962 (8,951)
query : 1 - 821 (821/821)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito_nucl 11.3333, mito 11, nucl 9.5,
cyto_nucl 9.16667, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016576)
HIX0016576
HIT000512788 (
ENST00000414854
)
(Uncharacterized protein KIAA0930;)
genome : 45,601,102 - 45,632,158 (31,057)
query : 1 - 556 (556/556)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 12.5, nucl 4.5, extr 4, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016576)
HIX0016576
HIT000522442 (
ENST00000424508
)
(Uncharacterized protein KIAA0930;)
genome : 45,601,104 - 45,609,380 (8,277)
query : 1 - 625 (625/625)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, extr 9, nucl 4, mito 4, mito_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016576)
HIX0016576
HIT000590384 (
ENST00000486640
)
(Uncharacterized protein KIAA0930;)
genome : 45,601,141 - 45,631,294 (30,154)
query : 1 - 574 (574/574)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 10, nucl 3, golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016576)
HIX0016576
HIT000515840 (
ENST00000417906
)
(Uncharacterized protein KIAA0930;)
genome : 45,601,765 - 45,636,623 (34,859)
query : 1 - 516 (516/516)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016576)
HIX0016576
HIT000599557 (
ENST00000496226
)
(Uncharacterized protein KIAA0930;)
genome : 45,607,215 - 45,608,326 (1,112)
query : 1 - 589 (589/589)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, mito 10, cyto_nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016576)
HIX0016576
HIT000595764 (
ENST00000492273
)
(Uncharacterized protein KIAA0930;)
genome : 45,607,216 - 45,608,298 (1,083)
query : 1 - 403 (403/403)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, extr 13, cyto_nucl 9.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016576)
HIX0041314
HIT000097479
(
BC043011
)
Representative transcript
(Conserved hypothetical protein.)
genome : 45,658,153 - 45,659,466 (1,314)
query : 1 - 1,314 (1,314/1,407)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 8.83333, nucl 8, extr_plas 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041314)
HIX0139472
HIT000543801 (
ENST00000445867
)
(Plectin/S10, N-terminal domain containing protein.)
genome : 45,671,480 - 45,671,966 (487)
query : 1 - 487 (487/487)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11.5, mito 8, nucl 5.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0139472)
HIX0203195
HIT000066700
(
AF085808
)
Representative transcript
(Uroplakin-3a; UP3a; Uroplakin III; UPIII; Precursor;)
genome : 45,680,863 - 45,691,755 (10,893)
query : 1 - 1,051 (1,051/1,059)
6 exons
identity = 0.997
5'(0.976;1.000;1.000;0.988;1.000;1.000)3'
coverage = 0.992
InterPro :
IPR024825 : Uroplakin-3a
IPR024831 : Uroplakin-3
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 9, lyso 5, cyto_mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203195)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AF222750
Gallus
sp. (Chicken) : BX935790
Bos
sp. (Cow) : ENSBTAT00000013081
Macaca
sp. (Macaque) : ENSMMUT00000030812
Monodelphis
sp. (Opossum) : ENSMODT00000009036
Pongo
sp. (Orangutan) : ENSPPYT00000013856
Rattus
sp. (Rat) : XM_001078189
Equus
sp. (Horse) : XM_001488250
Pan
sp. (Chimpanzee) : XM_515193
Canis
sp. (Dog) : XM_846321
Pan
sp. (Chimpanzee) : XR_021566
HIX0203195
HIT000103023 (
ENST00000216211
)
(Uroplakin-3a; UP3a; Uroplakin III; UPIII; Precursor;)
genome : 45,680,863 - 45,691,755 (10,893)
query : 1 - 1,051 (1,051/1,051)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 9, lyso 5, cyto_mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203195)
HIX0203195
HIT000263695
(
BC069544
)
(Uroplakin-3a; UP3a; Uroplakin III; UPIII; Precursor;)
genome : 45,680,863 - 45,691,650 (10,788)
query : 1 - 945 (945/945)
6 exons
identity = 0.995
5'(0.976;1.000;1.000;0.988;1.000;0.990)3'
coverage = 1.000
InterPro :
IPR024825 : Uroplakin-3a
IPR024831 : Uroplakin-3
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 9, lyso 5, cyto_mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203195)
HIX0203195
HIT000203513 (
NM_006953
)
(Uroplakin-3a; UP3a; Uroplakin III; UPIII; Precursor;)
genome : 45,680,868 - 45,691,755 (10,888)
query : 1 - 1,046 (1,046/1,056)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 9, lyso 5, cyto_mito 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203195)
HIX0203195
HIT000654404 (
NM_001167574
)
(Uroplakin-3a; UP3a; Uroplakin III; UPIII; Precursor;)
genome : 45,680,868 - 45,691,755 (10,888)
query : 1 - 683 (683/693)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, mito 9, plas 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203195)
HIX0203195
HIT000339156
(
BC108900
)
(Uroplakin-3a; UP3a; Uroplakin III; UPIII; Precursor;)
genome : 45,680,872 - 45,691,703 (10,832)
query : 1 - 627 (627/627)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR024825 : Uroplakin-3a
IPR024831 : Uroplakin-3
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, mito 9, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203195)
HIX0203195
HIT000479436 (
ENST00000396082
)
(Uroplakin-3a; UP3a; Uroplakin III; UPIII; Precursor;)
genome : 45,680,872 - 45,691,703 (10,832)
query : 1 - 627 (627/627)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, mito 9, plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203195)
HIX0203195
HIT000267542
(
CR456608
)
(Uroplakin-3a; UP3a; Uroplakin III; UPIII; Precursor;)
genome : 45,680,893 - 45,691,682 (10,790)
query : 1 - 948 (948/948)
6 exons
identity = 0.998
5'(1.000;1.000;1.000;0.988;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR024825 : Uroplakin-3a
IPR024831 : Uroplakin-3
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 9, lyso 5, cyto_mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203195)
HIX0203195
HIT000058210
(
AB010637
)
(Uroplakin-3a; UP3a; Uroplakin III; UPIII; Precursor;)
genome : 45,680,895 - 45,691,600 (10,706)
query : 1 - 864 (864/864)
6 exons
identity = 0.998
5'(1.000;1.000;0.996;1.000;1.000;0.994)3'
coverage = 1.000
InterPro :
IPR024825 : Uroplakin-3a
IPR024831 : Uroplakin-3
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 14, mito 9, lyso 5, cyto_mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203195)
HIX0203195
HIT000058200
(
AB010116
)
(Uroplakin-3a; UP3a; Uroplakin III; UPIII; Precursor;)
genome : 45,681,866 - 45,691,600 (9,735)
query : 1 - 768 (768/768)
5 exons
identity = 0.997
5'(1.000;0.996;1.000;1.000;0.994)3'
coverage = 1.000
InterPro :
IPR024825 : Uroplakin-3a
IPR024831 : Uroplakin-3
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 13, extr 7, mito 7, cyto 4, mito_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203195)
HIX0016577
HIT000595189 (
ENST00000491671
)
(Hypothetical short protein.)
genome : 45,704,849 - 45,706,054 (1,206)
query : 1 - 711 (711/711)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 2, cyto 2, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016577)
HIX0016577
HIT000103024 (
ENST00000216214
)
(Protein FAM118A;)
genome : 45,704,863 - 45,737,836 (32,974)
query : 1 - 3,458 (3,458/3,458)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 19, nucl 6, cyto 3, extr 1, mito 1, lyso 1,
golg 1
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016577)
HIX0016577
HIT000044900
(
AK125027
)
Representative transcript
(Protein FAM118A;)
genome : 45,704,863 - 45,737,834 (32,972)
query : 1 - 3,455 (3,455/3,455)
10 exons
identity = 0.996
5'(0.999;1.000;1.000;1.000;0.991;1.000;0.997;
1.000;1.000;0.993)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 19, nucl 6, cyto 3, extr 1, mito 1, lyso 1,
golg 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016577)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK143690
Bos
sp. (Cow) : BC111196
Equus
sp. (Horse) : ENSECAT00000012805
Macaca
sp. (Macaque) : ENSMMUT00000043922
Pongo
sp. (Orangutan) : ENSPPYT00000013857
Monodelphis
sp. (Opossum) : XM_001364023
Rattus
sp. (Rat) : XM_235547
Pan
sp. (Chimpanzee) : XM_515194
Canis
sp. (Dog) : XM_538329
HIX0016577
HIT000585418 (
ENST00000481447
)
(Non-protein coding transcript.)
genome : 45,704,922 - 45,705,981 (1,060)
query : 1 - 261 (261/261)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016577)
HIX0016577
HIT000485699 (
NM_001104595
)
(Protein FAM118A;)
genome : 45,705,081 - 45,737,835 (32,755)
query : 1 - 3,239 (3,239/3,255)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 19, nucl 6, cyto 3, extr 1, mito 1, lyso 1,
golg 1
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016577)
HIX0016577
HIT000539810 (
ENST00000441876
)
(Protein FAM118A;)
genome : 45,705,728 - 45,736,642 (30,915)
query : 1 - 1,776 (1,776/1,776)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 19, nucl 6, cyto 3, extr 1, mito 1, lyso 1,
golg 1
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016577)
HIX0016577
HIT000206769 (
NM_017911
)
(Protein FAM118A;)
genome : 45,705,785 - 45,737,835 (32,051)
query : 1 - 2,912 (2,912/2,928)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 19, nucl 6, cyto 3, extr 1, mito 1, lyso 1,
golg 1
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016577)
HIX0016577
HIT000003117
(
AK000642
)
(Protein FAM118A;)
genome : 45,705,815 - 45,736,643 (30,829)
query : 1 - 1,690 (1,690/1,707)
9 exons
identity = 0.998
5'(1.000;1.000;1.000;0.991;1.000;0.997;1.000;
1.000;0.997)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 19, nucl 6, cyto 3, extr 1, mito 1, lyso 1,
golg 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016577)
HIX0016577
HIT000505315 (
ENST00000405673
)
(Protein FAM118A.)
genome : 45,706,005 - 45,725,293 (19,289)
query : 1 - 1,612 (1,612/1,612)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 16, extr 4, nucl 4, cyto 4, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016577)
HIX0016577
HIT000581849 (
ENST00000477714
)
(Protein FAM118A.)
genome : 45,706,018 - 45,724,122 (18,105)
query : 1 - 756 (756/756)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 14, nucl 6, cyto 5, extr 3, cyto_mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016577)
HIX0016577
HIT000036331
(
BC013696
)
(Protein FAM118A;)
genome : 45,706,028 - 45,736,638 (30,611)
query : 1 - 1,472 (1,472/1,511)
9 exons
identity = 0.997
5'(1.000;1.000;0.996;0.991;1.000;0.997;1.000;
1.000;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 19, nucl 6, cyto 3, extr 1, mito 1, lyso 1,
golg 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016577)
HIX0016577
HIT000525711 (
ENST00000427777
)
(Protein FAM118A.)
genome : 45,714,301 - 45,723,841 (9,541)
query : 1 - 521 (521/521)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 12, cyto 8, extr 3, nucl 3, golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016577)
HIX0016577
HIT000550172 (
ENST00000452238
)
(Conserved hypothetical protein.)
genome : 45,714,361 - 45,718,307 (3,947)
query : 1 - 583 (583/583)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 15, extr_plas 11, cyto 6, extr 5, nucl 3,
cyto_pero 3, cyto_golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016577)
HIX0016577
HIT000522491 (
ENST00000424557
)
(Conserved hypothetical protein.)
genome : 45,714,672 - 45,718,096 (3,425)
query : 1 - 536 (536/549)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.976
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 15, extr_plas 11, cyto 6, extr 5, nucl 3,
cyto_pero 3, cyto_golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016577)
HIX0016577
HIT000267337
(
CR456403
)
(Protein FAM118A;)
genome : 45,718,250 - 45,736,317 (18,068)
query : 5 - 1,120 (1,116/1,120)
8 exons
identity = 0.997
5'(1.000;1.000;0.991;1.000;0.997;1.000;1.000;
1.000)3'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 19, nucl 6, cyto 3, extr 1, mito 1, lyso 1,
golg 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016577)
HIX0016577
HIT000580670 (
ENST00000476478
)
(Protein FAM118A.)
genome : 45,725,029 - 45,726,600 (1,572)
query : 1 - 354 (354/354)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 15
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016577)
HIX0016577
HIT000564800 (
ENST00000459849
)
(Protein FAM118A.)
genome : 45,725,516 - 45,728,572 (3,057)
query : 1 - 695 (695/695)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 13, cyto_nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016577)
HIX0016577
HIT000496829
(
AK302205
)
(Protein FAM118A.)
genome : 45,725,525 - 45,736,374 (10,850)
query : 1 - 930 (930/930)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016577)
HIX0016577
HIT000505270 (
ENST00000405548
)
(Protein FAM118A.)
genome : 45,725,525 - 45,736,374 (10,850)
query : 1 - 930 (930/930)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016577)
HIX0016577
HIT000580932 (
ENST00000476754
)
(Protein FAM118A.)
genome : 45,725,525 - 45,728,536 (3,012)
query : 1 - 675 (675/675)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 12.5, cyto_nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016577)
HIX0016577
HIT000591425 (
ENST00000487732
)
(Protein FAM118A.)
genome : 45,726,338 - 45,732,291 (5,954)
query : 1 - 677 (677/677)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 6.5, cyto_nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016577)
HIX0016577
HIT000587007 (
ENST00000483102
)
(Protein FAM118A.)
genome : 45,730,906 - 45,736,642 (5,737)
query : 1 - 657 (657/657)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito 13, cyto_nucl 3, nucl 2, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016577)
HIX0016577
HIT000567202 (
ENST00000462361
)
(Protein FAM118A.)
genome : 45,731,097 - 45,736,727 (5,631)
query : 1 - 712 (712/712)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 11, extr 6, mito 6, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016577)
HIX0016577
HIT000583256 (
ENST00000479180
)
(Hypothetical short protein.)
genome : 45,733,714 - 45,736,763 (3,050)
query : 17 - 649 (633/649)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.975
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 9, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016577)
HIX0016577
HIT000009513
(
AK026239
)
(Hypothetical short protein.)
genome : 45,736,853 - 45,737,835 (983)
query : 1 - 983 (983/1,006)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, extr 9, nucl 6.5, cyto_nucl 6, cyto 4.5,
extr_plas 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016577)
HIX0027884
HIT000213449 (
NM_148674
)
(Structural maintenance of chromosomes protein 1B; SMC protein 1B; SMC-1-beta; SMC-1B;)
genome : 45,739,946 - 45,809,500 (69,555)
query : 1 - 4,251 (4,251/4,266)
25 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 8, cysk 3, pero 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027884)
HIX0027884
HIT000311294 (
ENST00000357450
)
(Structural maintenance of chromosomes protein 1B; SMC protein 1B; SMC-1-beta; SMC-1B;)
genome : 45,739,944 - 45,809,448 (69,505)
query : 1 - 4,201 (4,201/4,201)
25 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 8, cysk 3, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027884)
HIX0027884
HIT000045609
(
AK125736
)
(Structural maintenance of chromosomes protein 1B.)
genome : 45,740,016 - 45,767,469 (27,454)
query : 6 - 1,940 (1,935/1,940)
12 exons
identity = 0.997
3'(0.994;1.000;1.000;0.993;0.994;1.000;1.000;
1.000;1.000;1.000;1.000;0.992)5'
coverage = 0.997
InterPro :
IPR003395 : RecF/RecN/SMC, N-terminal
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 14, nucl 11.5, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027884)
HIX0027884
HIT000504824 (
ENST00000404354
)
(Structural maintenance of chromosomes protein 1B.)
genome : 45,740,339 - 45,809,500 (69,162)
query : 1 - 3,636 (3,636/3,636)
23 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 7, cysk 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027884)
HIX0027884
HIT000388800
(
BC126208
)
(Structural maintenance of chromosomes protein 1B.)
genome : 45,740,339 - 45,809,480 (69,142)
query : 1 - 3,616 (3,616/3,616)
23 exons
identity = 0.999
3'(1.000;1.000;0.994;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003395 : RecF/RecN/SMC, N-terminal
IPR010935 : SMCs flexible hinge
GO :
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0005694 : Cellular Component : chromosome
0051276 : Biological Process : chromosome organization
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 7, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027884)
HIX0027884
HIT000248307
(
AJ504806
)
Representative transcript
(Structural maintenance of chromosomes protein 1B; SMC protein 1B; SMC-1-beta; SMC-1B;)
genome : 45,740,358 - 45,809,500 (69,143)
query : 1 - 3,839 (3,839/3,839)
25 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.984;1.000)5'
coverage = 1.000
InterPro :
IPR003395 : RecF/RecN/SMC, N-terminal
IPR010935 : SMCs flexible hinge
GO :
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0005694 : Cellular Component : chromosome
0051276 : Biological Process : chromosome organization
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 8, cysk 3, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027884)
Ortholog candidate ( ->
Evola
)
Oryzias
sp. (Medaka) : AB115699
Mus
sp. (Mouse) : AF303827
Takifugu
sp. (Fugu) : AJ534332
Gallus
sp. (Chicken) : CR388851
Tetraodon
sp. (Tetraodon) : GSTENT00025674001
Rattus
sp. (Rat) : XM_001078226
Macaca
sp. (Macaque) : XM_001109647
Pan
sp. (Chimpanzee) : XM_001135642
Danio
sp. (Zebrafish) : XM_001334221
Monodelphis
sp. (Opossum) : XM_001378427
Equus
sp. (Horse) : XM_001488372
Canis
sp. (Dog) : XM_538328
HIX0016579
HIT000135524 (
ENST00000342894
)
(RIB43A-like with coiled-coils protein 2;)
genome : 45,809,572 - 45,828,376 (18,805)
query : 1 - 1,478 (1,478/1,478)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, extr 2, cyto 2, mito 2, cyto_mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016579)
HIX0016579
HIT000205594 (
NM_015653
)
(RIB43A-like with coiled-coils protein 2;)
genome : 45,809,572 - 45,828,302 (18,731)
query : 1 - 1,405 (1,405/1,405)
7 exons
identity = 0.999
5'(1.000;0.988;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 8, cyto_golg 5.5, mito 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016579)
HIX0016579
HIT000023416
(
AK098586
)
Representative transcript
(RIB43A-like with coiled-coils protein 2;)
genome : 45,809,572 - 45,828,293 (18,722)
query : 1 - 1,396 (1,396/1,396)
7 exons
identity = 0.999
5'(1.000;0.988;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR008805 : RIB43A
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 8, cyto_golg 5.5, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016579)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB168158
Mus
sp. (Mouse) : AK006801
Rattus
sp. (Rat) : BC079434
Bos
sp. (Cow) : BC109543
Danio
sp. (Zebrafish) : BC159113
Gallus
sp. (Chicken) : BX930002
Canis
sp. (Dog) : ENSCAFT00000001267
Pongo
sp. (Orangutan) : ENSPPYT00000013859
Monodelphis
sp. (Opossum) : XM_001378443
Equus
sp. (Horse) : XM_001488386
Pan
sp. (Chimpanzee) : XM_525622
HIX0016579
HIT000637062 (
ENST00000538017
)
(RIB43A-like with coiled-coils protein 2;)
genome : 45,809,574 - 45,828,293 (18,720)
query : 1 - 1,394 (1,394/1,394)
7 exons
identity = 0.999
5'(1.000;1.000;0.997;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 8, cyto_golg 5.5, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016579)
HIX0016579
HIT000384852
(
AK225722
)
(RIB43A-like with coiled-coils protein 2;)
genome : 45,809,591 - 45,828,294 (18,704)
query : 1 - 1,378 (1,378/1,399)
7 exons
identity = 0.996
5'(0.997;0.988;1.000;1.000;0.991;0.994;1.000)3'
coverage = 1.000
InterPro :
IPR008805 : RIB43A
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 8, cyto_golg 5.5, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016579)
HIX0016579
HIT000031368
(
BC003024
)
(RIB43A-like with coiled-coils protein 2;)
genome : 45,809,610 - 45,828,294 (18,685)
query : 1 - 1,359 (1,359/1,406)
7 exons
identity = 0.999
5'(1.000;0.988;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR008805 : RIB43A
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 8, cyto_golg 5.5, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016579)
HIX0016579
HIT000034657
(
BC009904
)
(RIB43A-like with coiled-coils protein 2;)
genome : 45,809,610 - 45,828,294 (18,685)
query : 1 - 1,359 (1,359/1,405)
7 exons
identity = 0.999
5'(1.000;0.988;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR008805 : RIB43A
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 8, cyto_golg 5.5, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016579)
HIX0016579
HIT000250627
(
AL442116
)
(RIB43A-like with coiled-coils protein 2;)
genome : 45,809,620 - 45,828,302 (18,683)
query : 1 - 1,356 (1,356/1,358)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR008805 : RIB43A
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, extr 2, cyto 2, mito 2, cyto_mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016579)
HIX0016579
HIT000601493 (
ENST00000498265
)
(RIB43A-like with coiled-coils protein 2;)
genome : 45,810,204 - 45,818,386 (8,183)
query : 1 - 642 (642/642)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11, cyto 11, cyto_nucl 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016579)
HIX0016579
HIT000267372
(
CR456438
)
(RIB43A-like with coiled-coils protein 2;)
genome : 45,813,481 - 45,828,276 (14,796)
query : 1 - 973 (973/973)
5 exons
identity = 0.997
5'(1.000;1.000;0.991;0.994;1.000)3'
coverage = 1.000
InterPro :
IPR008805 : RIB43A
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, extr 4, cyto 4, mito 4, cyto_mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016579)
HIX0016579
HIT000268248
(
CR457398
)
(RIB43A-like with coiled-coils protein 2;)
genome : 45,813,490 - 45,828,242 (14,753)
query : 1 - 930 (930/930)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.987)3'
coverage = 1.000
InterPro :
IPR008805 : RIB43A
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, extr 2, cyto 2, mito 2, cyto_mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016579)
HIX0016579
HIT000570887 (
ENST00000466226
)
(RIB43A-like with coiled-coils protein 2.)
genome : 45,813,901 - 45,826,896 (12,996)
query : 15 - 702 (688/702)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 9, mito 9, cyto 8.5, cyto_nucl 7, nucl 4.5,
extr_plas 4.5, E.R._mito 4.5, mito_pero 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016579)
HIX0016579
HIT000023962
(
AL050075
)
(RIB43A-like with coiled-coils protein 2.)
genome : 45,821,849 - 45,828,294 (6,446)
query : 1 - 505 (505/524)
3 exons
identity = 0.994
5'(0.990;0.994;1.000)3'
coverage = 1.000
InterPro :
IPR008805 : RIB43A
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 13, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016579)
HIX0175818
HIT000552373 (
ENST00000454439
)
(Hypothetical short protein.)
genome : 45,831,744 - 45,844,624 (12,881)
query : 1 - 545 (545/545)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 11, cyto_nucl 10.5, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175818)
HIX0016580
HIT000509412 (
ENST00000411478
)
(Anaphylatoxin/fibulin domain containing protein.)
genome : 45,898,118 - 45,927,204 (29,087)
query : 1 - 568 (568/568)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11.5, cyto_mito 10, extr 9, cyto_nucl 7.5,
cyto 6.5, cyto_pero 5.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016580)
HIX0016580
HIT000543044 (
ENST00000445110
)
(Conserved hypothetical protein.)
genome : 45,898,157 - 45,921,558 (23,402)
query : 1 - 512 (512/512)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 3.5, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016580)
HIX0016580
HIT000553167 (
ENST00000455233
)
(Anaphylatoxin/fibulin domain containing protein.)
genome : 45,898,712 - 45,928,975 (30,264)
query : 1 - 671 (671/671)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016580)
HIX0016580
HIT000203082 (
NM_006486
)
(Anaphylatoxin/fibulin domain containing protein.)
genome : 45,898,719 - 45,997,014 (98,296)
query : 1 - 2,947 (2,947/2,947)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;0.994;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25.5, extr_plas 13.5, lyso 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016580)
HIX0016580
HIT000307659 (
ENST00000348697
)
(Anaphylatoxin/fibulin domain containing protein.)
genome : 45,898,719 - 45,997,014 (98,296)
query : 1 - 2,947 (2,947/2,947)
17 exons
identity = 0.993
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.876;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25.5, extr_plas 13.5, lyso 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016580)
HIX0016580
HIT000203081 (
NM_006485
)
(Anaphylatoxin/fibulin domain containing protein.)
genome : 45,898,719 - 45,961,581 (62,863)
query : 1 - 2,662 (2,662/2,662)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;0.994;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29.5, extr_plas 15.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016580)
HIX0016580
HIT000198924 (
NM_001996
)
(Anaphylatoxin/fibulin domain containing protein.)
genome : 45,898,719 - 45,959,242 (60,524)
query : 1 - 2,295 (2,295/2,312)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;0.994;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27.5, extr_plas 14.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016580)
HIX0016580
HIT000203083 (
NM_006487
)
(Anaphylatoxin/fibulin domain containing protein.)
genome : 45,898,719 - 45,954,591 (55,873)
query : 1 - 2,485 (2,485/2,485)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;0.994;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28.5, extr_plas 15
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016580)
HIX0016580
HIT000082599
(
AK075566
)
Representative transcript
(Fibulin-2; FIBL-2; Precursor;)
genome : 45,898,760 - 45,997,014 (98,255)
query : 1 - 2,799 (2,799/2,799)
17 exons
identity = 0.997
5'(1.000;1.000;1.000;0.943;1.000;1.000;1.000;
1.000;0.993;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000152 : EGF-type aspartate/asparagine hydroxylation site
IPR000742 : Epidermal growth factor-like domain
IPR001881 : EGF-like calcium-binding domain
IPR009030 : Insulin-like growth factor binding protein, N-terminal
IPR013032 : EGF-like, conserved site
IPR018097 : EGF-like calcium-binding, conserved site
IPR026823 : Complement Clr-like EGF domain
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 16, cyto 10.5, extr 2, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016580)
HIX0016580
HIT000039582
(
BC022497
)
(Fibulin-1 isoform C precursor.)
genome : 45,898,763 - 45,959,242 (60,480)
query : 1 - 2,251 (2,251/2,266)
15 exons
identity = 0.998
5'(0.995;1.000;1.000;0.994;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.992;1.000;
0.998)3'
coverage = 1.000
InterPro :
IPR000020 : Anaphylatoxin/fibulin
IPR000152 : EGF-type aspartate/asparagine hydroxylation site
IPR000742 : Epidermal growth factor-like domain
IPR001881 : EGF-like calcium-binding domain
IPR009030 : Insulin-like growth factor binding protein, N-terminal
IPR013032 : EGF-like, conserved site
IPR018097 : EGF-like calcium-binding, conserved site
IPR026823 : Complement Clr-like EGF domain
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0005576 : Cellular Component : extracellular region
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28.5, extr_plas 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016580)
HIX0016580
HIT000108546 (
ENST00000262722
)
(Anaphylatoxin/fibulin domain containing protein.)
genome : 45,898,763 - 45,959,242 (60,480)
query : 1 - 2,251 (2,251/2,251)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27.5, extr_plas 14.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016580)
HIX0016580
HIT000499904
(
AK316291
)
(Fibulin-1 isoform C precursor.)
genome : 45,898,763 - 45,959,237 (60,475)
query : 1 - 2,226 (2,226/2,226)
15 exons
identity = 0.989
5'(0.983;0.858;1.000;0.994;1.000;1.000;1.000;
1.000;0.993;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR000020 : Anaphylatoxin/fibulin
IPR000152 : EGF-type aspartate/asparagine hydroxylation site
IPR000742 : Epidermal growth factor-like domain
IPR001881 : EGF-like calcium-binding domain
IPR009030 : Insulin-like growth factor binding protein, N-terminal
IPR013032 : EGF-like, conserved site
IPR018097 : EGF-like calcium-binding, conserved site
IPR026823 : Complement Clr-like EGF domain
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0005576 : Cellular Component : extracellular region
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 12, extr 5, E.R. 4, lyso 4, nucl 3,
mito_pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016580)
HIX0016580
HIT000082495
(
AK075460
)
(Fibulin-1 isoform C precursor.)
genome : 45,898,763 - 45,959,235 (60,473)
query : 1 - 2,357 (2,357/2,357)
16 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.994;1.000;1.000;
1.000;1.000;0.993;1.000;1.000;1.000;0.992;
0.992;1.000)3'
coverage = 1.000
InterPro :
IPR000020 : Anaphylatoxin/fibulin
IPR000152 : EGF-type aspartate/asparagine hydroxylation site
IPR000742 : Epidermal growth factor-like domain
IPR001881 : EGF-like calcium-binding domain
IPR009030 : Insulin-like growth factor binding protein, N-terminal
IPR013032 : EGF-like, conserved site
IPR018097 : EGF-like calcium-binding, conserved site
IPR026823 : Complement Clr-like EGF domain
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0005576 : Cellular Component : extracellular region
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26.5, extr_plas 14, lyso 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016580)
HIX0016580
HIT000495430
(
AK300806
)
(Fibulin-1 isoform C precursor.)
genome : 45,898,763 - 45,959,233 (60,471)
query : 1 - 2,222 (2,222/2,222)
15 exons
identity = 0.989
5'(0.983;0.858;1.000;0.994;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR000020 : Anaphylatoxin/fibulin
IPR000152 : EGF-type aspartate/asparagine hydroxylation site
IPR000742 : Epidermal growth factor-like domain
IPR001881 : EGF-like calcium-binding domain
IPR009030 : Insulin-like growth factor binding protein, N-terminal
IPR013032 : EGF-like, conserved site
IPR018097 : EGF-like calcium-binding, conserved site
IPR026823 : Complement Clr-like EGF domain
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0005576 : Cellular Component : extracellular region
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 12, extr 5, E.R. 4, lyso 4, nucl 3,
mito_pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016580)
HIX0016580
HIT000504326 (
ENST00000402984
)
(Anaphylatoxin/fibulin domain containing protein.)
genome : 45,898,763 - 45,959,232 (60,470)
query : 1 - 2,355 (2,355/2,355)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26.5, extr_plas 14, lyso 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016580)
HIX0016580
HIT000125231 (
ENST00000327858
)
(Anaphylatoxin/fibulin domain containing protein.)
genome : 45,898,771 - 45,997,015 (98,245)
query : 1 - 2,896 (2,896/2,896)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25.5, extr_plas 13.5, lyso 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016580)
HIX0016580
HIT000074244
(
AF217999
)
(Fibulin-1 isoform A precursor.)
genome : 45,898,777 - 45,959,233 (60,457)
query : 1 - 2,231 (2,231/2,280)
15 exons
identity = 0.995
5'(1.000;1.000;1.000;0.988;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.980)3'
coverage = 0.998
InterPro :
IPR000020 : Anaphylatoxin/fibulin
IPR000152 : EGF-type aspartate/asparagine hydroxylation site
IPR000742 : Epidermal growth factor-like domain
IPR001881 : EGF-like calcium-binding domain
IPR009030 : Insulin-like growth factor binding protein, N-terminal
IPR013032 : EGF-like, conserved site
IPR018097 : EGF-like calcium-binding, conserved site
IPR026823 : Complement Clr-like EGF domain
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0005576 : Cellular Component : extracellular region
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 27.5, extr_plas 14.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016580)
HIX0016580
HIT000540104 (
ENST00000442170
)
(Anaphylatoxin/fibulin domain containing protein.)
genome : 45,898,850 - 45,961,581 (62,732)
query : 1 - 2,531 (2,531/2,531)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29.5, extr_plas 15.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016580)
HIX0016580
HIT000070531
(
AF126110
)
(Fibulin-1; FIBL-1; Precursor;)
genome : 45,898,856 - 45,997,013 (98,158)
query : 1 - 2,810 (2,810/2,810)
17 exons
identity = 0.997
5'(1.000;1.000;1.000;0.994;1.000;1.000;1.000;
1.000;0.993;1.000;1.000;1.000;1.000;0.984;
1.000;1.000;0.994)3'
coverage = 1.000
InterPro :
IPR000020 : Anaphylatoxin/fibulin
IPR000152 : EGF-type aspartate/asparagine hydroxylation site
IPR000742 : Epidermal growth factor-like domain
IPR001881 : EGF-like calcium-binding domain
IPR009030 : Insulin-like growth factor binding protein, N-terminal
IPR013032 : EGF-like, conserved site
IPR018097 : EGF-like calcium-binding, conserved site
IPR026823 : Complement Clr-like EGF domain
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0005576 : Cellular Component : extracellular region
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25.5, extr_plas 13.5, lyso 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016580)
HIX0016580
HIT000217421
(
U01244
)
(Fibulin-1; FIBL-1; Precursor;)
genome : 45,898,856 - 45,996,563 (97,708)
query : 1 - 2,359 (2,359/2,359)
17 exons
identity = 0.997
5'(1.000;1.000;1.000;0.994;1.000;1.000;1.000;
1.000;0.993;1.000;1.000;1.000;1.000;0.984;
1.000;1.000;0.989)3'
coverage = 1.000
InterPro :
IPR000020 : Anaphylatoxin/fibulin
IPR000152 : EGF-type aspartate/asparagine hydroxylation site
IPR000742 : Epidermal growth factor-like domain
IPR001881 : EGF-like calcium-binding domain
IPR009030 : Insulin-like growth factor binding protein, N-terminal
IPR013032 : EGF-like, conserved site
IPR018097 : EGF-like calcium-binding, conserved site
IPR026823 : Complement Clr-like EGF domain
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0005576 : Cellular Component : extracellular region
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25.5, extr_plas 13.5, lyso 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016580)
HIX0016580
HIT000321852
(
X53742
)
(Fibulin-1 isoform B precursor.)
genome : 45,898,856 - 45,961,581 (62,726)
query : 1 - 2,525 (2,525/2,525)
15 exons
identity = 0.998
5'(1.000;1.000;1.000;0.994;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.992;0.984;
1.000)3'
coverage = 1.000
InterPro :
IPR000020 : Anaphylatoxin/fibulin
IPR000152 : EGF-type aspartate/asparagine hydroxylation site
IPR000742 : Epidermal growth factor-like domain
IPR001881 : EGF-like calcium-binding domain
IPR009030 : Insulin-like growth factor binding protein, N-terminal
IPR013032 : EGF-like, conserved site
IPR018097 : EGF-like calcium-binding, conserved site
IPR026823 : Complement Clr-like EGF domain
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0005576 : Cellular Component : extracellular region
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29.5, extr_plas 15.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016580)
HIX0016580
HIT000321853
(
X53743
)
(Fibulin-1 isoform C precursor.)
genome : 45,898,856 - 45,959,241 (60,386)
query : 1 - 2,156 (2,156/2,156)
15 exons
identity = 0.996
5'(1.000;1.000;1.000;0.994;1.000;1.000;1.000;
1.000;0.993;1.000;1.000;1.000;1.000;0.984;
0.991)3'
coverage = 1.000
InterPro :
IPR000020 : Anaphylatoxin/fibulin
IPR000152 : EGF-type aspartate/asparagine hydroxylation site
IPR000742 : Epidermal growth factor-like domain
IPR001881 : EGF-like calcium-binding domain
IPR009030 : Insulin-like growth factor binding protein, N-terminal
IPR013032 : EGF-like, conserved site
IPR018097 : EGF-like calcium-binding, conserved site
IPR026823 : Complement Clr-like EGF domain
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0005576 : Cellular Component : extracellular region
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27.5, extr_plas 14.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016580)
HIX0016580
HIT000133553 (
ENST00000340923
)
(Anaphylatoxin/fibulin domain containing protein.)
genome : 45,898,856 - 45,954,591 (55,736)
query : 1 - 2,348 (2,348/2,348)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28.5, extr_plas 15
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016580)
HIX0016580
HIT000321851
(
X53741
)
(Fibulin-1 isoform A precursor.)
genome : 45,898,856 - 45,954,591 (55,736)
query : 1 - 2,349 (2,349/2,349)
15 exons
identity = 0.997
5'(1.000;1.000;1.000;0.994;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.992;0.984;
0.995)3'
coverage = 1.000
InterPro :
IPR000020 : Anaphylatoxin/fibulin
IPR000152 : EGF-type aspartate/asparagine hydroxylation site
IPR000742 : Epidermal growth factor-like domain
IPR001881 : EGF-like calcium-binding domain
IPR009030 : Insulin-like growth factor binding protein, N-terminal
IPR013032 : EGF-like, conserved site
IPR018097 : EGF-like calcium-binding, conserved site
IPR026823 : Complement Clr-like EGF domain
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0005576 : Cellular Component : extracellular region
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28.5, extr_plas 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016580)
HIX0016580
HIT000537769 (
ENST00000439835
)
(Non-protein coding transcript.)
genome : 45,898,926 - 45,914,668 (15,743)
query : 1 - 552 (552/572)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.965
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016580)
HIX0016580
HIT000548909 (
ENST00000450975
)
(Conserved hypothetical protein.)
genome : 45,913,225 - 45,914,666 (1,442)
query : 1 - 459 (459/459)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016580)
HIX0016580
HIT000552213 (
ENST00000454279
)
(Anaphylatoxin/fibulin domain containing protein.)
genome : 45,914,462 - 45,927,204 (12,743)
query : 1 - 565 (565/565)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 5.5, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016580)
HIX0016580
HIT000549409 (
ENST00000451475
)
(Anaphylatoxin/fibulin domain containing protein.)
genome : 45,921,420 - 45,929,778 (8,359)
query : 3 - 544 (542/544)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 9.5, cyto_nucl 9, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016580)
HIX0016580
HIT000535645 (
ENST00000437711
)
(Anaphylatoxin/fibulin domain containing protein.)
genome : 45,923,725 - 45,938,094 (14,370)
query : 3 - 753 (751/753)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 8, mito 7, cyto_pero 5.5, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016580)
HIX0097170
HIT000390567
(
BC131605
)
Representative transcript
(Fibulin-1; FIBL-1; Fragment;)
genome : 45,928,167 - 45,929,010 (844)
query : 1 - 844 (844/854)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 0.988
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0097170)
HIX0016580
HIT000565464 (
ENST00000460538
)
(EGF-like calcium-binding domain containing protein.)
genome : 45,928,773 - 45,937,159 (8,387)
query : 1 - 543 (543/543)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, extr 14, cyto_nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016580)
HIX0016580
HIT000570269 (
ENST00000465578
)
(EGF-like calcium-binding domain containing protein.)
genome : 45,929,639 - 45,931,464 (1,826)
query : 13 - 481 (469/481)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.975
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016580)
HIX0016580
HIT000588378 (
ENST00000484531
)
(EGF-like calcium-binding domain containing protein.)
genome : 45,929,661 - 45,931,311 (1,651)
query : 1 - 350 (350/350)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 8.5, cyto_nucl 8, cyto_pero 6.66667,
nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016580)
HIX0016580
HIT000580561 (
ENST00000476366
)
(EGF-like calcium-binding domain containing protein.)
genome : 45,937,109 - 45,947,009 (9,901)
query : 1 - 872 (872/872)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 11.5, cyto_nucl 11.3333, cyto 6,
cyto_pero 4.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016580)
HIX0027865
HIT000043280
(
AK123407
)
Representative transcript
(Conserved hypothetical protein.)
genome : 45,963,530 - 45,966,243 (2,714)
query : 2 - 2,500 (2,499/2,500)
2 exons
identity = 0.984
3'(0.986;0.983)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, nucl 3, E.R. 3, plas 2, cyto 2, pero 2,
lyso 2, E.R._mito 2, cyto_pero 2, cyto_plas 2, mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027865)
HIX0016580
HIT000565231 (
ENST00000460300
)
(Hypothetical short protein.)
genome : 45,972,919 - 45,974,157 (1,239)
query : 1 - 442 (442/442)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 7, nucl 3, mito 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016580)
HIX0016580
HIT000048598
(
AK128725
)
(Conserved hypothetical protein.)
genome : 45,992,869 - 45,997,014 (4,146)
query : 1 - 4,145 (4,145/4,145)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016580)
HIX0016580
HIT000018206
(
AK093339
)
(Conserved hypothetical protein.)
genome : 45,994,714 - 45,997,014 (2,301)
query : 1 - 2,301 (2,301/2,301)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, cyto_nucl 4, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016580)
HIX0041139
HIT000020843
(
AK095988
)
Representative transcript
(Activating molecule in BECN1-regulated autophagy protein 1 isoform 1.)
genome : 45,996,626 - 45,998,697 (2,072)
query : 1 - 2,076 (2,076/2,076)
1 exon
identity = 0.990
3'(0.990)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 7.5, cyto_nucl 7.33333, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041139)
HIX0041315
HIT000097999
(
BC045163
)
Representative transcript
(Conserved hypothetical protein.)
genome : 46,000,312 - 46,001,501 (1,190)
query : 1 - 548 (548/567)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 11.5, extr 11, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041315)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000013861
HIX0041315
HIT000520905 (
ENST00000422971
)
(Conserved hypothetical protein.)
genome : 46,000,312 - 46,001,501 (1,190)
query : 1 - 548 (548/548)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 11.5, extr 11, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041315)
HIX0227243
HIT000601253 (
ENST00000498009
)
(Armadillo-like helical domain containing protein.)
genome : 46,068,068 - 46,114,344 (46,277)
query : 1 - 873 (873/873)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10.1667, cyto 9.5, mito 8, nucl 7.5,
cyto_pero 6.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227243)
HIX0227243
HIT000575185 (
ENST00000470722
)
(Hypothetical protein.)
genome : 46,085,346 - 46,096,202 (10,857)
query : 1 - 391 (391/391)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 11, cyto 10, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227243)
HIX0227243
HIT000581165 (
ENST00000476998
)
(Conserved hypothetical protein.)
genome : 46,099,853 - 46,134,719 (34,867)
query : 1 - 482 (482/482)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10, extr 9, cyto_nucl 8.5, cyto 8, nucl 5,
E.R._mito 5, mito_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227243)
HIX0227243
HIT000587432 (
ENST00000483549
)
(Ataxin-10 domain containing protein.)
genome : 46,114,303 - 46,136,680 (22,378)
query : 1 - 778 (778/778)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 10, cyto_nucl 7, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227243)
HIX0227243
HIT000569229 (
ENST00000464482
)
(Hypothetical short protein.)
genome : 46,136,390 - 46,140,697 (4,308)
query : 1 - 439 (439/439)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227243)
HIX0227257
HIT000697119 (
ENST00000585261
)
(Non-protein coding transcript.)
genome : 46,156,404 - 46,156,478 (75)
query : 1 - 75 (75/75)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227257)
HIX0227257
HIT000725982 (
NR_039919
)
(Non-protein coding transcript.)
genome : 46,156,404 - 46,156,478 (75)
query : 1 - 75 (75/75)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227257)
HIX0175711
HIT000536164 (
ENST00000438230
)
(Conserved hypothetical protein.)
genome : 46,188,298 - 46,189,516 (1,219)
query : 1 - 1,219 (1,219/1,219)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, cyto_nucl 4, nucl 2.5, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175711)
HIX0227154
HIT000504096 (
ENST00000402380
)
(Ataxin-10 domain containing protein.)
genome : 46,189,476 - 46,239,677 (50,202)
query : 1 - 564 (564/564)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, extr 1, nucl 1, cyto 1, cyto_nucl 1, pero 1,
cyto_pero 1
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227154)
HIX0227154
HIT000025662
(
AL137374
)
Representative transcript
(Ataxin-10 domain containing protein.)
genome : 46,202,837 - 46,239,874 (37,038)
query : 7 - 586 (580/613)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.988
InterPro :
IPR019156 : Ataxin-10 domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, nucl 6, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227154)
HIX0175797
HIT000549052 (
ENST00000451118
)
(Conserved hypothetical protein.)
genome : 46,271,879 - 46,283,628 (11,750)
query : 1 - 805 (805/805)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175797)
HIX0028320
HIT000317744 (
NM_058238
)
(Protein Wnt-7b; Precursor;)
genome : 46,316,249 - 46,373,008 (56,760)
query : 1 - 3,911 (3,911/3,928)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, golg 3.5, lyso 3, E.R._golg 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028320)
HIX0028320
HIT000132094 (
ENST00000339464
)
(Protein Wnt-7b; Precursor;)
genome : 46,316,242 - 46,373,009 (56,768)
query : 1 - 3,919 (3,919/3,919)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, golg 3.5, lyso 3, E.R._golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028320)
HIX0028320
HIT000059929
(
AB062766
)
(Protein Wnt-7b; Precursor;)
genome : 46,317,658 - 46,372,639 (54,982)
query : 1 - 2,133 (2,133/2,160)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR005817 : Wnt
IPR013300 : Wnt-7 protein
IPR018161 : Wnt protein, conserved site
GO :
0005102 : Molecular Function : receptor binding
0005576 : Cellular Component : extracellular region
0007275 : Biological Process : multicellular organismal development
0016055 : Biological Process : Wnt signaling pathway
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, golg 3.5, lyso 3, E.R._golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028320)
HIX0028320
HIT000051254
(
BC034923
)
Representative transcript
(Protein Wnt-7b; Precursor;)
genome : 46,317,658 - 46,372,731 (55,074)
query : 1 - 2,225 (2,225/2,242)
4 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR005817 : Wnt
IPR013300 : Wnt-7 protein
IPR018161 : Wnt protein, conserved site
GO :
0005102 : Molecular Function : receptor binding
0005576 : Cellular Component : extracellular region
0007275 : Biological Process : multicellular organismal development
0016055 : Biological Process : Wnt signaling pathway
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, golg 3.5, lyso 3, E.R._golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028320)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AB197137
Gallus
sp. (Chicken) : AY753290
Mus
sp. (Mouse) : BC058398
Monodelphis
sp. (Opossum) : ENSMODT00000009270
Oryzias
sp. (Medaka) : ENSORLT00000002993
Oryzias
sp. (Medaka) : ENSORLT00000013933
Pongo
sp. (Orangutan) : ENSPPYT00000013863
Tetraodon
sp. (Tetraodon) : GSTENT00013021001
Tetraodon
sp. (Tetraodon) : GSTENT00035271001
Takifugu
sp. (Fugu) : SINFRUT00000141557
Macaca
sp. (Macaque) : XM_001110372
Equus
sp. (Horse) : XM_001488532
Danio
sp. (Zebrafish) : XM_001920184
Bos
sp. (Cow) : XM_603482
Danio
sp. (Zebrafish) : XM_686786
Canis
sp. (Dog) : XM_851822
Pan
sp. (Chimpanzee) : XR_023111
HIX0028320
HIT000042892
(
AK123019
)
(Protein Wnt-7b; Precursor;)
genome : 46,317,659 - 46,372,603 (54,945)
query : 1 - 2,096 (2,096/2,096)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR005817 : Wnt
IPR013300 : Wnt-7 protein
IPR018161 : Wnt protein, conserved site
GO :
0005102 : Molecular Function : receptor binding
0005576 : Cellular Component : extracellular region
0007275 : Biological Process : multicellular organismal development
0016055 : Biological Process : Wnt signaling pathway
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028320)
HIX0028320
HIT000508107 (
ENST00000410089
)
(Protein Wnt-7b; Precursor;)
genome : 46,317,991 - 46,371,902 (53,912)
query : 1 - 2,202 (2,202/2,202)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21.5, cyto_mito 14.5, cyto 4.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028320)
HIX0028320
HIT000507528 (
ENST00000409496
)
(Protein Wnt-7b; Precursor;)
genome : 46,317,991 - 46,368,595 (50,605)
query : 1 - 2,285 (2,285/2,285)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 9, mito 8.5, extr_plas 8.5, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028320)
HIX0028320
HIT000422323
(
AK289526
)
(Protein Wnt-7b; Precursor;)
genome : 46,318,519 - 46,368,244 (49,726)
query : 1 - 1,406 (1,406/1,406)
4 exons
identity = 0.999
3'(0.999;1.000;1.000;0.995)5'
coverage = 1.000
InterPro :
IPR005817 : Wnt
IPR013300 : Wnt-7 protein
IPR018161 : Wnt protein, conserved site
GO :
0005102 : Molecular Function : receptor binding
0005576 : Cellular Component : extracellular region
0007275 : Biological Process : multicellular organismal development
0016055 : Biological Process : Wnt signaling pathway
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 9, mito 8.5, extr_plas 8.5, extr 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028320)
HIX0028320
HIT000079311
(
AF416743
)
(Protein Wnt-7b; Precursor;)
genome : 46,318,720 - 46,373,008 (54,289)
query : 1 - 1,440 (1,440/1,440)
4 exons
identity = 0.999
3'(1.000;1.000;1.000;0.998)5'
coverage = 1.000
InterPro :
IPR005817 : Wnt
IPR013300 : Wnt-7 protein
IPR018161 : Wnt protein, conserved site
GO :
0005102 : Molecular Function : receptor binding
0005576 : Cellular Component : extracellular region
0007275 : Biological Process : multicellular organismal development
0016055 : Biological Process : Wnt signaling pathway
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, golg 3.5, lyso 3, E.R._golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028320)
HIX0028320
HIT000508078 (
ENST00000410058
)
(Protein Wnt-7b; Precursor;)
genome : 46,323,362 - 46,372,685 (49,324)
query : 1 - 714 (714/714)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, mito 1, E.R. 1, lyso 1, golg 1, E.R._mito 1,
E.R._golg 1
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028320)
HIX0028320
HIT000526474 (
ENST00000428540
)
(Protein Wnt-7b; Precursor;)
genome : 46,327,176 - 46,371,789 (44,614)
query : 1 - 521 (521/521)
3 exons
identity = 0.989
3'(1.000;1.000;0.974)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 5.5, cyto 5, nucl 4, cysk 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028320)
HIX0028320
HIT000690082 (
ENST00000578136
)
(Non-protein coding transcript.)
genome : 46,372,758 - 46,372,834 (77)
query : 1 - 77 (77/77)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028320)
HIX0197267
pHIT000123029 ( pHIT000123029 )
Representative transcript
(Hypothetical protein.)
genome : 46,374,697 - 46,457,952 (83,256)
query : 1 - 783 (783/783)
2 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0197267)
CAGE tag :
T22F02AAD3ED
HIX0028097
HIT000048364
(
AK128491
)
Representative transcript
(Conserved hypothetical protein.)
genome : 46,402,496 - 46,406,657 (4,162)
query : 1 - 4,174 (4,174/4,174)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 11.3333, extr 10, cyto 5,
extr_plas 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028097)
Ortholog candidate ( ->
Evola
)
Canis
sp. (Dog) : ENSCAFT00000037247
Pan
sp. (Chimpanzee) : ENSPTRT00000056818
HIX0028097
HIT000563344 (
NR_027240
)
(Conserved hypothetical protein.)
genome : 46,402,496 - 46,406,657 (4,162)
query : 1 - 4,162 (4,162/4,162)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, extr 12, cyto 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0028097)
HIX0027921
HIT000050251
(
AK130980
)
Representative transcript
(Hypothetical short protein.)
genome : 46,429,562 - 46,429,999 (438)
query : 1 - 438 (438/438)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 9, cyto_nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027921)
HIX0020361
HIT000563202 (
NR_027036
)
(Hypothetical protein.)
genome : 46,435,788 - 46,440,748 (4,961)
query : 1 - 1,609 (1,609/1,625)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 11.5, extr 10, cyto 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020361)
HIX0020361
HIT000025857
(
AL137569
)
(Conserved hypothetical protein.)
genome : 46,435,788 - 46,439,944 (4,157)
query : 2 - 4,147 (4,146/4,163)
1 exon
identity = 0.994
3'(0.994)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto 11, extr 7, mito_nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020361)
HIX0020361
HIT000094749
(
BC037213
)
Representative transcript
(Hypothetical protein.)
genome : 46,436,161 - 46,440,490 (4,330)
query : 1 - 2,569 (2,569/2,584)
3 exons
identity = 0.998
3'(0.997;0.997;0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 11.5, extr 10, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020361)
HIX0020361
HIT000519472 (
ENST00000421538
)
(Conserved hypothetical protein.)
genome : 46,436,161 - 46,440,490 (4,330)
query : 1 - 2,569 (2,569/2,584)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 11.5, extr 10, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020361)
HIX0020361
HIT000542824 (
ENST00000444890
)
(Hypothetical short protein.)
genome : 46,436,889 - 46,440,733 (3,845)
query : 1 - 493 (493/493)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020361)
HIX0023303
HIT000010133
(
AK026859
)
Representative transcript
(Conserved hypothetical protein.)
genome : 46,437,059 - 46,438,382 (1,324)
query : 1 - 1,325 (1,325/1,348)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 12.5, nucl 10, extr 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023303)
HIX0017597
HIT000479365 (
ENST00000396008
)
(Conserved hypothetical protein.)
genome : 46,445,358 - 46,450,024 (4,667)
query : 1 - 2,817 (2,817/2,817)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, nucl 8, extr 4, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017597)
HIX0017597
HIT000021056
(
AK096201
)
(Conserved hypothetical protein.)
genome : 46,445,358 - 46,449,676 (4,319)
query : 1 - 2,469 (2,469/2,469)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12, nucl 9.5, cyto 9.5, extr 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017597)
HIX0017597
HIT000004281
(
AK001807
)
Representative transcript
(Conserved hypothetical protein.)
genome : 46,446,339 - 46,450,024 (3,686)
query : 1 - 1,784 (1,784/1,784)
3 exons
identity = 0.997
3'(1.000;0.984;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, nucl 8, extr 4, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017597)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000013864
Pan
sp. (Chimpanzee) : ENSPTRT00000027113
HIX0017597
HIT000128539 (
ENST00000333761
)
(Conserved hypothetical protein.)
genome : 46,446,339 - 46,450,024 (3,686)
query : 1 - 1,784 (1,784/1,784)
3 exons
identity = 0.997
3'(1.000;0.987;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, nucl 8, extr 4, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017597)
HIX0017597
HIT000207100 (
NM_018280
)
(Conserved hypothetical protein.)
genome : 46,446,339 - 46,450,024 (3,686)
query : 1 - 1,836 (1,836/1,836)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, nucl 8, extr 4, cyto 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017597)
HIX0197682
pHIT000123035 ( pHIT000123035 )
Representative transcript
(Hypothetical short protein.)
genome : 46,448,933 - 46,458,695 (9,763)
query : 1 - 198 (198/198)
2 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0197682)
CAGE tag :
T22F02AC06B3
HIX0016582
HIT000514136 (
ENST00000416202
)
(Conserved hypothetical protein.)
genome : 46,449,585 - 46,453,090 (3,506)
query : 1 - 464 (464/464)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 12.5, cyto_nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016582)
HIX0016582
HIT000563200 (
NR_027034
)
(Conserved hypothetical protein.)
genome : 46,449,726 - 46,454,401 (4,676)
query : 1 - 1,634 (1,634/1,651)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 8, extr_plas 8, cyto 6.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016582)
HIX0016582
HIT000094641
(
BC036832
)
(Conserved hypothetical protein.)
genome : 46,449,741 - 46,501,900 (52,160)
query : 3 - 883 (881/920)
5 exons
identity = 0.997
5'(0.951;1.000;1.000;1.000;1.000)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto 9, cyto_nucl 9, nucl 7.5,
cyto_pero 7.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016582)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : ENSMMUT00000043919
Pongo
sp. (Orangutan) : ENSPPYT00000013865
Pan
sp. (Chimpanzee) : XM_001140302
HIX0016582
HIT000362329 (
ENST00000381051
)
(Conserved hypothetical protein.)
genome : 46,449,749 - 46,501,903 (52,155)
query : 1 - 875 (875/875)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto 9, cyto_nucl 9, nucl 7.5,
cyto_pero 7.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016582)
HIX0016582
HIT000549100 (
ENST00000451166
)
(Hypothetical short protein.)
genome : 46,450,340 - 46,453,090 (2,751)
query : 1 - 877 (877/877)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 7, nucl 6, cyto_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016582)
HIX0016582
HIT000543375 (
ENST00000445441
)
(Hypothetical short protein.)
genome : 46,450,795 - 46,453,090 (2,296)
query : 1 - 287 (287/287)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 12.5, cyto_nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016582)
HIX0019720
HIT000034327
(
BC009388
)
Representative transcript
(Hypothetical protein.)
genome : 46,451,621 - 46,454,040 (2,420)
query : 9 - 1,188 (1,180/1,206)
2 exons
identity = 0.998
3'(0.999;0.998)5'
coverage = 0.993
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, extr 5, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019720)
HIX0019720
HIT000537357 (
ENST00000439423
)
(Hypothetical protein.)
genome : 46,451,620 - 46,454,040 (2,421)
query : 1 - 1,181 (1,181/1,181)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, extr 5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019720)
HIX0027864
HIT000510577 (
ENST00000412643
)
(Hypothetical short protein.)
genome : 46,463,236 - 46,465,771 (2,536)
query : 1 - 867 (867/867)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 7, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027864)
HIX0027864
HIT000043256
(
AK123383
)
Representative transcript
(Hypothetical protein.)
genome : 46,464,601 - 46,466,898 (2,298)
query : 1 - 2,298 (2,298/2,298)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 13.3333, mito 6, cyto 3.5, extr 3,
E.R._mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027864)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : ENSPTRT00000027115
HIX0197649
pHIT000037491 ( pHIT000037491 )
Representative transcript
(Hypothetical protein.)
genome : 46,474,333 - 46,475,922 (1,590)
query : 1 - 243 (243/243)
2 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0197649)
CAGE tag :
H08BA58I0901
HIX0016582
HIT000541424 (
ENST00000443490
)
(Conserved hypothetical protein.)
genome : 46,476,192 - 46,494,438 (18,247)
query : 1 - 494 (494/494)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016582)
HIX0016582
HIT000006698
(
AK023424
)
Representative transcript
(Conserved hypothetical protein.)
genome : 46,481,877 - 46,507,355 (25,479)
query : 3 - 2,266 (2,264/2,266)
6 exons
identity = 0.999
5'(0.994;1.000;1.000;1.000;1.000;0.999)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, cyto 12.5, nucl 10.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016582)
HIX0016582
HIT000563199 (
NR_027033
)
(Conserved hypothetical protein.)
genome : 46,481,877 - 46,509,807 (27,931)
query : 1 - 4,716 (4,716/4,733)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, cyto 5.5, cyto_nucl 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016582)
HIX0016582
HIT000533373 (
ENST00000435439
)
(Conserved hypothetical protein.)
genome : 46,481,877 - 46,507,355 (25,479)
query : 1 - 2,264 (2,264/2,264)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, cyto 12.5, nucl 10.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016582)
HIX0016582
HIT000314070 (
ENST00000360737
)
(Conserved hypothetical protein.)
genome : 46,481,883 - 46,509,808 (27,926)
query : 1 - 4,560 (4,560/4,560)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 10.5, mito 10, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016582)
HIX0016582
HIT000050146
(
AK130875
)
(Conserved hypothetical protein.)
genome : 46,481,883 - 46,507,518 (25,636)
query : 1 - 2,270 (2,270/2,270)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 10.5, mito 10, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016582)
HIX0213381
HIT000659775 (
NR_037413
)
(Non-protein coding transcript.)
genome : 46,486,924 - 46,487,006 (83)
query : 1 - 83 (83/83)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213381)
HIX0213381
HIT000691591 (
ENST00000579667
)
(Non-protein coding transcript.)
genome : 46,486,924 - 46,487,006 (83)
query : 1 - 83 (83/83)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213381)
HIX0016582
HIT000343745 (
ENST00000362116
)
(Non-protein coding transcript.)
genome : 46,508,629 - 46,508,702 (74)
query : 1 - 74 (74/74)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016582)
HIX0016582
HIT000657944 (
NR_029478
)
(Non-protein coding transcript.)
genome : 46,508,629 - 46,508,702 (74)
query : 1 - 74 (74/74)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016582)
HIX0016582
HIT000693365 (
ENST00000581461
)
(Non-protein coding transcript.)
genome : 46,509,446 - 46,509,537 (92)
query : 1 - 92 (92/92)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016582)
HIX0016582
HIT000725983 (
NR_039920
)
(Non-protein coding transcript.)
genome : 46,509,446 - 46,509,537 (92)
query : 1 - 92 (92/92)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016582)
HIX0016582
HIT000471038 (
ENST00000385140
)
(Non-protein coding transcript.)
genome : 46,509,566 - 46,509,648 (83)
query : 1 - 83 (83/83)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016582)
HIX0016582
HIT000657945 (
NR_029479
)
(Non-protein coding transcript.)
genome : 46,509,566 - 46,509,648 (83)
query : 1 - 83 (83/83)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016582)
HIX0016582
HIT000046990
(
AK127117
)
(Conserved hypothetical protein.)
genome : 46,509,743 - 46,514,897 (5,155)
query : 1 - 5,153 (5,153/5,153)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 14, cyto 7.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016582)
HIX0016586
HIT000538277 (
ENST00000440343
)
(Non-protein coding transcript.)
genome : 46,546,424 - 46,594,307 (47,884)
query : 1 - 368 (368/368)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016586)
HIX0016586
HIT000513719 (
ENST00000415785
)
(Peroxisome proliferator-activated receptor alpha; PPAR-alpha; Nuclear receptor subfamily 1 group C member 1;)
genome : 46,546,455 - 46,594,488 (48,034)
query : 1 - 531 (531/531)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, cyto_nucl 10.5, extr 10, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016586)
HIX0016586
HIT000085634
(
AY258330
)
(Non-protein coding transcript.)
genome : 46,546,501 - 46,594,307 (47,807)
query : 1 - 291 (291/291)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016586)
HIX0016586
HIT000518738 (
ENST00000420804
)
(Peroxisome proliferator-activated receptor alpha; PPAR-alpha; Nuclear receptor subfamily 1 group C member 1;)
genome : 46,546,509 - 46,611,261 (64,753)
query : 1 - 572 (572/572)
4 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 10.5, nucl 9.5, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016586)
HIX0016586
HIT000085632
(
AY258328
)
(Non-protein coding transcript.)
genome : 46,546,509 - 46,594,307 (47,799)
query : 1 - 199 (199/199)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016586)
HIX0016586
HIT000422618
(
AK289821
)
Representative transcript
(Peroxisome proliferator-activated receptor alpha; PPAR-alpha; Nuclear receptor subfamily 1 group C member 1;)
genome : 46,546,731 - 46,631,638 (84,908)
query : 1 - 2,327 (2,327/2,327)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000536 : Nuclear hormone receptor, ligand-binding, core
IPR001628 : Zinc finger, nuclear hormone receptor-type
IPR001723 : Steroid hormone receptor
IPR003074 : Peroxisome proliferator-activated receptor
IPR003076 : Peroxisome proliferator-activated receptor, alpha
IPR008946 : Nuclear hormone receptor, ligand-binding
IPR013088 : Zinc finger, NHR/GATA-type
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0003707 : Molecular Function : steroid hormone receptor activity
0004879 : Molecular Function : ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0043401 : Biological Process : steroid hormone mediated signaling pathway
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016586)
Ortholog candidate ( ->
Evola
)
Takifugu
sp. (Fugu) : AB275885
Takifugu
sp. (Fugu) : AB275886
Oryzias
sp. (Medaka) : AB469412
Gallus
sp. (Chicken) : AF163809
Canis
sp. (Dog) : AF350327
Mus
sp. (Mouse) : AK035676
Bos
sp. (Cow) : BT020756
Danio
sp. (Zebrafish) : DQ017612
Macaca
sp. (Macaque) : DQ062812
Danio
sp. (Zebrafish) : DQ839548
Equus
sp. (Horse) : ENSECAT00000000699
Gallus
sp. (Chicken) : ENSGALT00000036096
Macaca
sp. (Macaque) : ENSMMUT00000043918
Monodelphis
sp. (Opossum) : ENSMODT00000009316
Pongo
sp. (Orangutan) : ENSPPYT00000013867
Pan
sp. (Chimpanzee) : ENSPTRT00000027121
Tetraodon
sp. (Tetraodon) : GSTENT00011860001
Rattus
sp. (Rat) : M88592
HIX0016586
HIT000565027 (
ENST00000460086
)
(Conserved hypothetical protein.)
genome : 46,546,731 - 46,547,873 (1,143)
query : 1 - 433 (433/433)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 17.5, nucl 9, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016586)
HIX0016586
HIT000075767
(
AF270490
)
(Conserved hypothetical protein.)
genome : 46,546,922 - 46,547,863 (942)
query : 1 - 232 (232/232)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto_nucl 6, nucl 5, extr 3, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016586)
HIX0016586
HIT000191505
(
L02932
)
(Peroxisome proliferator-activated receptor alpha; PPAR-alpha; Nuclear receptor subfamily 1 group C member 1;)
genome : 46,547,787 - 46,631,509 (83,723)
query : 4 - 1,854 (1,851/1,854)
8 exons
identity = 0.998
5'(1.000;1.000;1.000)3'
coverage = 0.998
InterPro :
IPR000536 : Nuclear hormone receptor, ligand-binding, core
IPR001628 : Zinc finger, nuclear hormone receptor-type
IPR001723 : Steroid hormone receptor
IPR003074 : Peroxisome proliferator-activated receptor
IPR003076 : Peroxisome proliferator-activated receptor, alpha
IPR008946 : Nuclear hormone receptor, ligand-binding
IPR013088 : Zinc finger, NHR/GATA-type
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0003707 : Molecular Function : steroid hormone receptor activity
0004879 : Molecular Function : ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0043401 : Biological Process : steroid hormone mediated signaling pathway
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016586)
HIX0016586
HIT000600169 (
ENST00000496865
)
(Non-protein coding transcript.)
genome : 46,547,789 - 46,552,488 (4,700)
query : 1 - 449 (449/449)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016586)
HIX0016586
HIT000085633
(
AY258329
)
(Non-protein coding transcript.)
genome : 46,567,183 - 46,594,307 (27,125)
query : 1 - 278 (278/278)
2 exons
identity = 0.996
5'(0.995;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016586)
HIX0016586
HIT000588460 (
ENST00000484619
)
(Non-protein coding transcript.)
genome : 46,567,183 - 46,594,307 (27,125)
query : 1 - 278 (278/278)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016586)
HIX0016586
HIT000085635
(
AY258331
)
(Non-protein coding transcript.)
genome : 46,567,231 - 46,594,307 (27,077)
query : 1 - 567 (567/567)
5 exons
identity = 0.998
5'(0.994;1.000;1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016586)
HIX0016586
HIT000585535 (
ENST00000481567
)
(Non-protein coding transcript.)
genome : 46,567,231 - 46,594,307 (27,077)
query : 1 - 567 (567/567)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016586)
HIX0016586
HIT000267481
(
CR456547
)
(Peroxisome proliferator-activated receptor alpha; PPAR-alpha; Nuclear receptor subfamily 1 group C member 1;)
genome : 46,572,645 - 46,631,300 (58,656)
query : 9 - 1,566 (1,558/1,566)
7 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.995
InterPro :
IPR000536 : Nuclear hormone receptor, ligand-binding, core
IPR001628 : Zinc finger, nuclear hormone receptor-type
IPR001723 : Steroid hormone receptor
IPR003074 : Peroxisome proliferator-activated receptor
IPR003076 : Peroxisome proliferator-activated receptor, alpha
IPR008946 : Nuclear hormone receptor, ligand-binding
IPR013088 : Zinc finger, NHR/GATA-type
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0003707 : Molecular Function : steroid hormone receptor activity
0004879 : Molecular Function : ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0043401 : Biological Process : steroid hormone mediated signaling pathway
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016586)
HIX0016586
HIT000503992 (
ENST00000402126
)
(Peroxisome proliferator-activated receptor alpha; PPAR-alpha; Nuclear receptor subfamily 1 group C member 1;)
genome : 46,572,645 - 46,631,300 (58,656)
query : 1 - 1,558 (1,558/1,558)
7 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016586)
HIX0016586
HIT000216534
(
S74349
)
(Peroxisome proliferator-activated receptor alpha; PPAR-alpha; Nuclear receptor subfamily 1 group C member 1;)
genome : 46,572,649 - 46,631,478 (58,830)
query : 1 - 1,731 (1,731/1,731)
7 exons
identity = 0.999
5'(1.000;0.996)3'
coverage = 1.000
InterPro :
IPR000536 : Nuclear hormone receptor, ligand-binding, core
IPR001628 : Zinc finger, nuclear hormone receptor-type
IPR001723 : Steroid hormone receptor
IPR003074 : Peroxisome proliferator-activated receptor
IPR003076 : Peroxisome proliferator-activated receptor, alpha
IPR008946 : Nuclear hormone receptor, ligand-binding
IPR013088 : Zinc finger, NHR/GATA-type
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0003707 : Molecular Function : steroid hormone receptor activity
0004879 : Molecular Function : ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0043401 : Biological Process : steroid hormone mediated signaling pathway
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016586)
HIX0016586
HIT000085631
(
AY258327
)
(Non-protein coding transcript.)
genome : 46,572,649 - 46,594,307 (21,659)
query : 1 - 151 (151/151)
2 exons
identity = 0.993
5'(0.988;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016586)
HIX0016586
HIT000029311
(
BC000052
)
(Peroxisome proliferator-activated receptor alpha; PPAR-alpha; Nuclear receptor subfamily 1 group C member 1;)
genome : 46,572,663 - 46,616,542 (43,880)
query : 1 - 1,552 (1,552/1,571)
6 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001628 : Zinc finger, nuclear hormone receptor-type
IPR003074 : Peroxisome proliferator-activated receptor
IPR003076 : Peroxisome proliferator-activated receptor, alpha
IPR008946 : Nuclear hormone receptor, ligand-binding
IPR013088 : Zinc finger, NHR/GATA-type
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0003707 : Molecular Function : steroid hormone receptor activity
0004879 : Molecular Function : ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016586)
HIX0016586
HIT000596731 (
ENST00000493286
)
(Peroxisome proliferator-activated receptor alpha; PPAR-alpha; Nuclear receptor subfamily 1 group C member 1;)
genome : 46,572,663 - 46,616,542 (43,880)
query : 1 - 1,552 (1,552/1,564)
6 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016586)
HIX0016586
HIT000085630
(
AY258326
)
(Non-protein coding transcript.)
genome : 46,594,250 - 46,594,307 (58)
query : 1 - 58 (58/58)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016586)
HIX0016586
HIT000268285
(
CR457435
)
(Peroxisome proliferator-activated receptor alpha; PPAR-alpha; Nuclear receptor subfamily 1 group C member 1;)
genome : 46,594,281 - 46,631,273 (36,993)
query : 1 - 1,403 (1,403/1,407)
6 exons
identity = 1.000
5'(1.000)3'
coverage = 0.997
InterPro :
IPR000536 : Nuclear hormone receptor, ligand-binding, core
IPR001628 : Zinc finger, nuclear hormone receptor-type
IPR001723 : Steroid hormone receptor
IPR003074 : Peroxisome proliferator-activated receptor
IPR003076 : Peroxisome proliferator-activated receptor, alpha
IPR008946 : Nuclear hormone receptor, ligand-binding
IPR013088 : Zinc finger, NHR/GATA-type
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0003707 : Molecular Function : steroid hormone receptor activity
0004879 : Molecular Function : ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0043401 : Biological Process : steroid hormone mediated signaling pathway
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016586)
HIX0016586
HIT000325350
(
Y07619
)
(Peroxisome proliferator-activated receptor alpha; PPAR-alpha; Nuclear receptor subfamily 1 group C member 1;)
genome : 46,594,281 - 46,631,277 (36,997)
query : 1 - 1,407 (1,407/1,407)
6 exons
identity = 0.997
5'(0.995)3'
coverage = 1.000
InterPro :
IPR000536 : Nuclear hormone receptor, ligand-binding, core
IPR001628 : Zinc finger, nuclear hormone receptor-type
IPR001723 : Steroid hormone receptor
IPR003074 : Peroxisome proliferator-activated receptor
IPR003076 : Peroxisome proliferator-activated receptor, alpha
IPR008946 : Nuclear hormone receptor, ligand-binding
IPR013088 : Zinc finger, NHR/GATA-type
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0003707 : Molecular Function : steroid hormone receptor activity
0004879 : Molecular Function : ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0043401 : Biological Process : steroid hormone mediated signaling pathway
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016586)
HIX0016586
HIT000484916
(
EU395809
)
(Peroxisome proliferator-activated receptor alpha; PPAR-alpha; Nuclear receptor subfamily 1 group C member 1;)
genome : 46,594,281 - 46,631,277 (36,997)
query : 1 - 1,204 (1,204/1,204)
5 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR001628 : Zinc finger, nuclear hormone receptor-type
IPR003076 : Peroxisome proliferator-activated receptor, alpha
IPR013088 : Zinc finger, NHR/GATA-type
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0004879 : Molecular Function : ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016586)
HIX0016586
HIT000486601
(
AB307690
)
(Peroxisome proliferator-activated receptor alpha; PPAR-alpha; Nuclear receptor subfamily 1 group C member 1;)
genome : 46,594,281 - 46,631,277 (36,997)
query : 1 - 1,407 (1,407/1,407)
6 exons
identity = 0.999
5'(1.000)3'
coverage = 1.000
InterPro :
IPR000536 : Nuclear hormone receptor, ligand-binding, core
IPR001628 : Zinc finger, nuclear hormone receptor-type
IPR001723 : Steroid hormone receptor
IPR003074 : Peroxisome proliferator-activated receptor
IPR003076 : Peroxisome proliferator-activated receptor, alpha
IPR008946 : Nuclear hormone receptor, ligand-binding
IPR013088 : Zinc finger, NHR/GATA-type
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0003707 : Molecular Function : steroid hormone receptor activity
0004879 : Molecular Function : ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0043401 : Biological Process : steroid hormone mediated signaling pathway
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016586)
HIX0016586
HIT000532279 (
ENST00000434345
)
(Peroxisome proliferator-activated receptor alpha; PPAR-alpha; Nuclear receptor subfamily 1 group C member 1;)
genome : 46,594,281 - 46,631,277 (36,997)
query : 1 - 1,204 (1,204/1,204)
5 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016586)
HIX0016586
HIT000557981
(
EU650667
)
(Peroxisome proliferator-activated receptor alpha; PPAR-alpha; Nuclear receptor subfamily 1 group C member 1;)
genome : 46,594,281 - 46,631,277 (36,997)
query : 1 - 1,407 (1,407/1,407)
6 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR000536 : Nuclear hormone receptor, ligand-binding, core
IPR001628 : Zinc finger, nuclear hormone receptor-type
IPR001723 : Steroid hormone receptor
IPR003074 : Peroxisome proliferator-activated receptor
IPR003076 : Peroxisome proliferator-activated receptor, alpha
IPR008946 : Nuclear hormone receptor, ligand-binding
IPR013088 : Zinc finger, NHR/GATA-type
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0003707 : Molecular Function : steroid hormone receptor activity
0004879 : Molecular Function : ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0043401 : Biological Process : steroid hormone mediated signaling pathway
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016586)
HIX0016586
HIT000653615
(
HQ692862
)
(Peroxisome proliferator-activated receptor alpha; PPAR-alpha; Nuclear receptor subfamily 1 group C member 1;)
genome : 46,594,281 - 46,631,277 (36,997)
query : 1 - 1,407 (1,407/1,407)
6 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR000536 : Nuclear hormone receptor, ligand-binding, core
IPR001628 : Zinc finger, nuclear hormone receptor-type
IPR001723 : Steroid hormone receptor
IPR003074 : Peroxisome proliferator-activated receptor
IPR003076 : Peroxisome proliferator-activated receptor, alpha
IPR008946 : Nuclear hormone receptor, ligand-binding
IPR013088 : Zinc finger, NHR/GATA-type
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0003707 : Molecular Function : steroid hormone receptor activity
0004879 : Molecular Function : ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0043401 : Biological Process : steroid hormone mediated signaling pathway
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016586)
HIX0016569
HIT000365507 (
NM_001017528
)
(HbrB-like family protein.)
genome : 45,064,427 - 45,133,561 (69,135)
query : 1 - 1,843 (1,843/1,843)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 16, cyto 6.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016569)
HIX0016569
HIT000365508 (
NM_001017529
)
(HbrB-like family protein.)
genome : 45,064,427 - 45,133,561 (69,135)
query : 1 - 1,726 (1,726/1,726)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, nucl 14, cyto 14
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016569)
HIX0016569
HIT000530120 (
ENST00000432186
)
(HbrB-like family protein.)
genome : 45,064,593 - 45,132,789 (68,197)
query : 1 - 905 (905/905)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18.5, nucl 16.5, cyto 13.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016569)
HIX0016569
HIT000656279 (
NM_001198721
)
(HbrB-like family protein.)
genome : 45,072,688 - 45,133,561 (60,874)
query : 1 - 2,556 (2,556/2,574)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.5, cyto 9.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016569)
HIX0016569
HIT000205422 (
NM_015366
)
(HbrB-like family protein.)
genome : 45,072,688 - 45,133,561 (60,874)
query : 1 - 2,017 (2,017/2,017)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 16, cyto 6.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016569)
HIX0016569
HIT000365509 (
NM_001017530
)
(HbrB-like family protein.)
genome : 45,072,688 - 45,133,561 (60,874)
query : 1 - 1,900 (1,900/1,900)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, nucl 14, cyto 14
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016569)
HIX0016569
HIT000595962 (
ENST00000492475
)
(HbrB-like family protein.)
genome : 45,072,861 - 45,132,754 (59,894)
query : 1 - 920 (920/920)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto 2.5, extr 2, cyto_nucl 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016569)
HIX0016569
HIT000016751
(
AK091884
)
(PRR5-ARHGAP8 fusion protein.)
genome : 45,072,937 - 45,133,561 (60,625)
query : 1 - 1,768 (1,768/1,768)
9 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.993;1.000)3'
coverage = 1.000
InterPro :
IPR013745 : HbrB-like
IPR016159 : Cullin repeat-like-containing domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22.5, cyto_mito 13.3333, cyto_nucl 3.33333,
extr 3, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016569)
HIX0016569
HIT000102154 (
ENST00000006251
)
(HbrB-like family protein.)
genome : 45,072,937 - 45,133,560 (60,624)
query : 1 - 1,767 (1,767/1,767)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 16, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016569)
HIX0016569
HIT000012462
(
AK055848
)
(Proline-rich protein 5 isoform 2.)
genome : 45,072,965 - 45,133,561 (60,597)
query : 1 - 2,278 (2,278/2,278)
10 exons
identity = 0.999
5'(1.000;0.998;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR013745 : HbrB-like
IPR016159 : Cullin repeat-like-containing domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.5, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016569)
HIX0016569
HIT000504537 (
ENST00000403581
)
(HbrB-like family protein.)
genome : 45,072,965 - 45,133,561 (60,597)
query : 1 - 2,279 (2,279/2,279)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.5, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016569)
HIX0016569
HIT000595778 (
ENST00000492289
)
(HbrB-like family protein.)
genome : 45,073,014 - 45,126,812 (53,799)
query : 1 - 735 (735/735)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, cyto 16, nucl 11, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016569)
HIX0016569
HIT000130317 (
ENST00000336985
)
(HbrB-like family protein.)
genome : 45,098,078 - 45,133,561 (35,484)
query : 1 - 1,878 (1,878/1,878)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto 8, nucl 4, cyto_pero 4, cyto_golg 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016569)
HIX0016569
HIT000318277 (
NM_181333
)
(HbrB-like family protein.)
genome : 45,098,078 - 45,133,561 (35,484)
query : 1 - 1,878 (1,878/1,878)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto 8, nucl 4, cyto_pero 4, cyto_golg 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016569)
HIX0016569
HIT000424361
(
AK291564
)
(Proline-rich protein 5; Protein observed with Rictor-1; Protor-1;)
genome : 45,098,092 - 45,133,316 (35,225)
query : 5 - 1,623 (1,619/1,623)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.998
InterPro :
IPR013745 : HbrB-like
IPR016159 : Cullin repeat-like-containing domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto 8, nucl 4, cyto_pero 4, cyto_golg 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016569)
HIX0016569
HIT000555894 (
ENST00000457960
)
(HbrB-like family protein.)
genome : 45,098,098 - 45,131,056 (32,959)
query : 1 - 879 (879/881)
8 exons
identity = 0.993
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.960)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18.5, cyto 17, nucl 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016569)
HIX0016569
HIT000504579 (
ENST00000403696
)
(HbrB-like family protein.)
genome : 45,098,098 - 45,128,197 (30,100)
query : 1 - 789 (789/789)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, nucl 3.5, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016569)
HIX0016569
HIT000529768 (
ENST00000431834
)
(HbrB-like family protein.)
genome : 45,098,099 - 45,133,321 (35,223)
query : 1 - 1,612 (1,612/1,612)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, cyto_nucl 3, nucl 2.5, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016569)
HIX0016569
HIT000314736 (
ENST00000361473
)
(HbrB-like family protein.)
genome : 45,098,113 - 45,258,551 (160,439)
query : 1 - 2,013 (2,013/2,013)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016569)
HIX0016569
HIT000072701
(
AF177331
)
(Proline-rich protein 5; Protein observed with Rictor-1; Protor-1;)
genome : 45,098,134 - 45,133,561 (35,428)
query : 1 - 1,822 (1,822/1,853)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.999)3'
coverage = 0.999
InterPro :
IPR013745 : HbrB-like
IPR016159 : Cullin repeat-like-containing domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto 8, nucl 4, cyto_pero 4, cyto_golg 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016569)
HIX0016569
HIT000250335
(
AL355192
)
(PRR5-ARHGAP8 fusion protein.)
genome : 45,098,355 - 45,258,586 (160,232)
query : 1 - 2,043 (2,043/2,043)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000198 : Rho GTPase-activating protein domain
IPR001251 : CRAL-TRIO domain
IPR008936 : Rho GTPase activation protein
IPR013745 : HbrB-like
GO :
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016569)
HIX0016569
HIT000308286 (
ENST00000352766
)
(HbrB-like family protein.)
genome : 45,098,355 - 45,258,586 (160,232)
query : 1 - 2,043 (2,043/2,043)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016569)
HIX0016569
HIT000616699 (
ENST00000517296
)
(HbrB-like family protein.)
genome : 45,098,355 - 45,258,586 (160,232)
query : 1 - 2,043 (2,043/2,043)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016569)
HIX0016569
HIT000530850 (
ENST00000432916
)
(HbrB-like family protein.)
genome : 45,098,366 - 45,133,542 (35,177)
query : 1 - 1,430 (1,430/1,430)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 19.5, nucl 15, cyto 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016569)
HIX0016569
HIT000318278 (
NM_181334
)
(HbrB-like family protein.)
genome : 45,098,382 - 45,258,664 (160,283)
query : 1 - 1,857 (1,857/1,857)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 13, nucl 8, pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016569)
HIX0016569
HIT000396667 (
ENST00000389773
)
(HbrB-like family protein.)
genome : 45,098,382 - 45,258,664 (160,283)
query : 1 - 1,857 (1,857/1,857)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 13, nucl 8, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016569)
HIX0016569
HIT000581482 (
ENST00000477331
)
(HbrB-like family protein.)
genome : 45,098,400 - 45,133,095 (34,696)
query : 1 - 1,041 (1,041/1,041)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, nucl 14, cyto 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016569)
HIX0016569
HIT000073663
(
AF195968
)
Representative transcript
(Proline-rich protein 5; Protein observed with Rictor-1; Protor-1;)
genome : 45,110,469 - 45,258,596 (148,128)
query : 1 - 1,684 (1,684/1,684)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000198 : Rho GTPase-activating protein domain
IPR001251 : CRAL-TRIO domain
IPR008936 : Rho GTPase activation protein
GO :
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 13.5, nucl 8, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016569)
HIX0016569
HIT000073664
(
AF195969
)
(CRAL-TRIO domain containing protein.)
genome : 45,121,126 - 45,205,681 (84,556)
query : 1 - 1,271 (1,271/1,271)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001251 : CRAL-TRIO domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 9, cyto_nucl 7.5, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016569)
HIX0016569
HIT000598619 (
ENST00000495250
)
(CRAL-TRIO domain containing protein.)
genome : 45,121,126 - 45,205,681 (84,556)
query : 1 - 1,271 (1,271/1,271)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 9, cyto_nucl 7.5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016569)
HIX0016569
HIT000615048 (
ENST00000515632
)
(CRAL-TRIO domain containing protein.)
genome : 45,121,141 - 45,258,551 (137,411)
query : 1 - 1,590 (1,590/1,590)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 13, nucl 9, extr 3, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016569)
HIX0016569
HIT000390808
(
BC132755
)
(CRAL-TRIO domain containing protein.)
genome : 45,121,141 - 45,258,525 (137,385)
query : 1 - 1,513 (1,513/1,513)
13 exons
identity = 0.999
5'(1.000;1.000;1.000;0.989;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR000198 : Rho GTPase-activating protein domain
IPR001251 : CRAL-TRIO domain
IPR008936 : Rho GTPase activation protein
GO :
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 13.5, nucl 8, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016569)
HIX0016569
HIT000390810
(
BC132757
)
(CRAL-TRIO domain containing protein.)
genome : 45,121,141 - 45,258,525 (137,385)
query : 1 - 1,513 (1,513/1,513)
13 exons
identity = 0.999
5'(1.000;1.000;1.000;0.989;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR000198 : Rho GTPase-activating protein domain
IPR001251 : CRAL-TRIO domain
IPR008936 : Rho GTPase activation protein
GO :
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 13.5, nucl 8, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016569)
HIX0016569
HIT000502794
(
BC144382
)
(CRAL-TRIO domain containing protein.)
genome : 45,121,141 - 45,258,525 (137,385)
query : 1 - 1,564 (1,564/1,564)
13 exons
identity = 0.999
5'(1.000;1.000;1.000;0.989;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR000198 : Rho GTPase-activating protein domain
IPR001251 : CRAL-TRIO domain
IPR008936 : Rho GTPase activation protein
GO :
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 13, nucl 9, extr 3, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016569)
HIX0016569
HIT000553323 (
ENST00000455389
)
(HbrB-like family protein.)
genome : 45,126,684 - 45,133,512 (6,829)
query : 1 - 1,431 (1,431/1,431)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016569)
HIX0016569
HIT000089111
(
BC016921
)
(Proline-rich protein 5; Protein observed with Rictor-1; Protor-1;)
genome : 45,126,764 - 45,133,561 (6,798)
query : 1 - 2,125 (2,125/2,140)
4 exons
identity = 0.998
5'(0.998;0.993;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR013745 : HbrB-like
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 15, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016569)
HIX0016569
HIT000598396 (
ENST00000495017
)
(HbrB-like family protein.)
genome : 45,126,764 - 45,133,561 (6,798)
query : 1 - 2,125 (2,125/2,125)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 15, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016569)
HIX0227353
HIT000203686 (
NM_007172
)
(Nuclear pore complex protein Nup50; 50 kDa nucleoporin; Nuclear pore-associated protein 60 kDa-like; Nucleoporin Nup50;)
genome : 45,559,726 - 45,583,892 (24,167)
query : 1 - 5,225 (5,225/5,225)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 17, nucl 11.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227353)
HIX0227353
HIT000264091
(
BC070133
)
(Nuclear pore complex protein Nup50; 50 kDa nucleoporin; Nuclear pore-associated protein 60 kDa-like; Nucleoporin Nup50;)
genome : 45,559,868 - 45,580,706 (20,839)
query : 3 - 1,899 (1,897/1,927)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.997)3'
coverage = 0.999
InterPro :
IPR000156 : Ran binding domain
IPR015007 : Nuclear pore complex, NUP2/50/61
GO :
0005643 : Cellular Component : nuclear pore
0046907 : Biological Process : intracellular transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 17, nucl 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227353)
HIX0227353
HIT000505821 (
ENST00000407019
)
(Nuclear pore complex protein Nup50; 50 kDa nucleoporin; Nuclear pore-associated protein 60 kDa-like; Nucleoporin Nup50;)
genome : 45,559,867 - 45,580,711 (20,845)
query : 1 - 2,059 (2,059/2,059)
9 exons
identity = 0.998
5'(1.000;1.000;1.000;0.955;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 12, nucl 8, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227353)
HIX0227353
HIT000433320
(
AK314454
)
(Nuclear pore complex protein Nup50; 50 kDa nucleoporin; Nuclear pore-associated protein 60 kDa-like; Nucleoporin Nup50;)
genome : 45,559,867 - 45,580,536 (20,670)
query : 1 - 1,728 (1,728/1,728)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.988;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR000156 : Ran binding domain
IPR015007 : Nuclear pore complex, NUP2/50/61
GO :
0005643 : Cellular Component : nuclear pore
0046907 : Biological Process : intracellular transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 17, nucl 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227353)
HIX0227353
HIT000498847
(
AK304223
)
(Nuclear pore complex protein Nup50; 50 kDa nucleoporin; Nuclear pore-associated protein 60 kDa-like; Nucleoporin Nup50;)
genome : 45,559,880 - 45,581,038 (21,159)
query : 1 - 2,024 (2,024/2,024)
7 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.987)3'
coverage = 1.000
InterPro :
IPR015007 : Nuclear pore complex, NUP2/50/61
GO :
0005643 : Cellular Component : nuclear pore
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 16.5, nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227353)
HIX0227353
HIT000528481 (
ENST00000430547
)
(Nuclear pore complex protein Nup50; 50 kDa nucleoporin; Nuclear pore-associated protein 60 kDa-like; Nucleoporin Nup50;)
genome : 45,559,881 - 45,574,195 (14,315)
query : 1 - 537 (537/537)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 22, nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227353)
HIX0227353
HIT000088916
(
BC016055
)
Representative transcript
(Nuclear pore complex protein Nup50; 50 kDa nucleoporin; Nuclear pore-associated protein 60 kDa-like; Nucleoporin Nup50;)
genome : 45,559,947 - 45,580,699 (20,753)
query : 1 - 1,961 (1,961/2,030)
9 exons
identity = 0.993
5'(1.000;1.000;1.000;0.955;0.995;1.000;1.000;
1.000;0.978)3'
coverage = 1.000
InterPro :
IPR000156 : Ran binding domain
IPR015007 : Nuclear pore complex, NUP2/50/61
GO :
0005643 : Cellular Component : nuclear pore
0046907 : Biological Process : intracellular transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 12, nucl 8, mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227353)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB168260
Gallus
sp. (Chicken) : AJ851427
Mus
sp. (Mouse) : AK133371
Danio
sp. (Zebrafish) : BC065637
Bos
sp. (Cow) : BC109804
Canis
sp. (Dog) : ENSCAFT00000001337
Equus
sp. (Horse) : ENSECAT00000017312
Monodelphis
sp. (Opossum) : ENSMODT00000009003
Pongo
sp. (Orangutan) : ENSPPYT00000013853
Tetraodon
sp. (Tetraodon) : GSTENT00000594001
Tetraodon
sp. (Tetraodon) : GSTENT00002174001
Takifugu
sp. (Fugu) : SINFRUT00000145201
Rattus
sp. (Rat) : U41845
Pan
sp. (Chimpanzee) : XM_001135221
HIX0227353
HIT000069567
(
AF107840
)
(Nuclear pore complex protein Nup50; 50 kDa nucleoporin; Nuclear pore-associated protein 60 kDa-like; Nucleoporin Nup50;)
genome : 45,560,023 - 45,580,706 (20,684)
query : 1 - 1,742 (1,742/1,757)
8 exons
identity = 0.998
5'(0.994;1.000;1.000;1.000;0.997;1.000;0.992;
1.000)3'
coverage = 1.000
InterPro :
IPR000156 : Ran binding domain
IPR015007 : Nuclear pore complex, NUP2/50/61
GO :
0005643 : Cellular Component : nuclear pore
0046907 : Biological Process : intracellular transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 17, nucl 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227353)
HIX0227353
HIT000596892 (
ENST00000493456
)
(Nuclear pore complex protein Nup50; 50 kDa nucleoporin; Nuclear pore-associated protein 60 kDa-like; Nucleoporin Nup50;)
genome : 45,560,516 - 45,580,385 (19,870)
query : 1 - 478 (478/478)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 13.5, extr 3, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227353)
HIX0227353
HIT000479449 (
ENST00000396096
)
(Nuclear pore complex protein Nup50; 50 kDa nucleoporin; Nuclear pore-associated protein 60 kDa-like; Nucleoporin Nup50;)
genome : 45,560,527 - 45,580,711 (20,185)
query : 1 - 1,895 (1,895/1,895)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 12, nucl 8, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227353)
HIX0227353
HIT000214403 (
NM_153645
)
(Nuclear pore complex protein Nup50; 50 kDa nucleoporin; Nuclear pore-associated protein 60 kDa-like; Nucleoporin Nup50;)
genome : 45,560,552 - 45,583,892 (23,341)
query : 1 - 5,051 (5,051/5,051)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 12, nucl 8, mito 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227353)
HIX0227353
HIT000040452
(
BC028125
)
(Nuclear pore complex protein Nup50; 50 kDa nucleoporin; Nuclear pore-associated protein 60 kDa-like; Nucleoporin Nup50;)
genome : 45,560,552 - 45,580,699 (20,148)
query : 1 - 1,860 (1,860/1,888)
9 exons
identity = 0.997
5'(0.989;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.989)3'
coverage = 1.000
InterPro :
IPR000156 : Ran binding domain
IPR015007 : Nuclear pore complex, NUP2/50/61
GO :
0005643 : Cellular Component : nuclear pore
0046907 : Biological Process : intracellular transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 12, nucl 8, mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227353)
HIX0227353
HIT000250583
(
AL389949
)
(Nuclear pore complex protein Nup50; 50 kDa nucleoporin; Nuclear pore-associated protein 60 kDa-like; Nucleoporin Nup50;)
genome : 45,564,047 - 45,574,316 (10,270)
query : 14 - 563 (550/563)
4 exons
identity = 0.998
5'(1.000;1.000;1.000;0.995)3'
coverage = 0.977
InterPro :
IPR015007 : Nuclear pore complex, NUP2/50/61
GO :
0005643 : Cellular Component : nuclear pore
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, cyto 14, nucl 13, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227353)
HIX0227353
HIT000250584
(
AL389950
)
(Nuclear pore complex protein Nup50; 50 kDa nucleoporin; Nuclear pore-associated protein 60 kDa-like; Nucleoporin Nup50;)
genome : 45,564,047 - 45,574,312 (10,266)
query : 14 - 559 (546/559)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.977
InterPro :
IPR015007 : Nuclear pore complex, NUP2/50/61
GO :
0005643 : Cellular Component : nuclear pore
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 13, cyto 13, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227353)
HIX0227353
HIT000267467
(
CR456533
)
(Nuclear pore complex protein Nup50; 50 kDa nucleoporin; Nuclear pore-associated protein 60 kDa-like; Nucleoporin Nup50;)
genome : 45,564,047 - 45,580,554 (16,508)
query : 5 - 1,441 (1,437/1,441)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.997
InterPro :
IPR000156 : Ran binding domain
IPR015007 : Nuclear pore complex, NUP2/50/61
GO :
0005643 : Cellular Component : nuclear pore
0046907 : Biological Process : intracellular transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 17, nucl 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227353)
HIX0227353
HIT000517321 (
ENST00000419387
)
(Nuclear pore complex protein Nup50 isoform a.)
genome : 45,564,047 - 45,574,781 (10,735)
query : 1 - 1,018 (1,018/1,018)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 17, nucl 7, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227353)
HIX0227353
HIT000520423 (
ENST00000422489
)
(Nuclear pore complex protein Nup50; 50 kDa nucleoporin; Nuclear pore-associated protein 60 kDa-like; Nucleoporin Nup50;)
genome : 45,564,052 - 45,579,396 (15,345)
query : 1 - 543 (543/543)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 16, nucl 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227353)
HIX0227353
HIT000589952 (
ENST00000486184
)
(Nuclear pore complex protein Nup50; 50 kDa nucleoporin; Nuclear pore-associated protein 60 kDa-like; Nucleoporin Nup50;)
genome : 45,566,931 - 45,574,311 (7,381)
query : 1 - 821 (821/821)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 9, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227353)
HIX0227353
HIT000250585
(
AL389951
)
(Hypothetical protein.)
genome : 45,580,481 - 45,583,300 (2,820)
query : 1 - 2,816 (2,816/2,881)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 7, mito 4, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227353)
HIX0016581
HIT000204224 (
NM_013236
)
(Ataxin-10 domain containing protein.)
genome : 46,067,678 - 46,241,187 (173,510)
query : 1 - 3,330 (3,330/3,340)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_mito 11.1667, cyto 11, mito 11, cyto_nucl 8.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016581)
HIX0016581
HIT000654428 (
NM_001167621
)
(Ataxin-10 domain containing protein.)
genome : 46,067,678 - 46,241,187 (173,510)
query : 1 - 3,138 (3,138/3,148)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 10.5, cyto_nucl 6, pero 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016581)
HIX0016581
HIT000362339 (
ENST00000381061
)
(Ataxin-10 domain containing protein.)
genome : 46,067,678 - 46,241,184 (173,507)
query : 1 - 3,135 (3,135/3,135)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 10.5, cyto_nucl 6, pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016581)
HIX0016581
HIT000106391 (
ENST00000252934
)
(Ataxin-10 domain containing protein.)
genome : 46,067,679 - 46,241,187 (173,509)
query : 1 - 3,329 (3,329/3,329)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_mito 11.1667, cyto 11, mito 11, cyto_nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016581)
HIX0016581
HIT000488972
(
AK294348
)
(Ataxin-10 isoform 2.)
genome : 46,067,685 - 46,239,945 (172,261)
query : 1 - 1,889 (1,889/1,889)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR011989 : Armadillo-like helical
IPR019156 : Ataxin-10 domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 10.5, cyto_nucl 6, pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016581)
HIX0016581
HIT000242599
(
AF086923
)
(Ataxin-10; Brain protein E46 homolog; Spinocerebellar ataxia type 10 protein;)
genome : 46,067,735 - 46,240,054 (172,320)
query : 2 - 2,174 (2,173/2,174)
12 exons
identity = 0.977
5'(0.967;1.000;1.000;1.000;0.981;1.000;0.976;
0.956;1.000;0.985;1.000;0.951)3'
coverage = 1.000
InterPro :
IPR011989 : Armadillo-like helical
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13, nucl 7.5, extr 5, mito 3,
pero 3, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016581)
HIX0016581
HIT000001927
(
AF119662
)
Representative transcript
(Ataxin-10; Brain protein E46 homolog; Spinocerebellar ataxia type 10 protein;)
genome : 46,067,735 - 46,239,867 (172,133)
query : 2 - 1,950 (1,949/1,959)
12 exons
identity = 0.994
5'(0.969;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.997)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_mito 11.1667, cyto 11, mito 11, cyto_nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016581)
HIX0016581
HIT000024125
(
AL050282
)
(Ataxin-10; Brain protein E46 homolog; Spinocerebellar ataxia type 10 protein;)
genome : 46,067,746 - 46,239,851 (172,106)
query : 1 - 1,926 (1,926/1,971)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR011989 : Armadillo-like helical
IPR019156 : Ataxin-10 domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_mito 11.1667, cyto 11, mito 11, cyto_nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016581)
HIX0016581
HIT000009008
(
AK025734
)
(Ataxin-10; Brain protein E46 homolog; Spinocerebellar ataxia type 10 protein;)
genome : 46,067,747 - 46,239,867 (172,121)
query : 1 - 1,941 (1,941/1,959)
12 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.994;
1.000;1.000;1.000;1.000;0.994)3'
coverage = 1.000
InterPro :
IPR011989 : Armadillo-like helical
IPR019156 : Ataxin-10 domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_mito 11.1667, cyto 11, mito 11, cyto_nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016581)
HIX0016581
HIT000033262
(
BC007508
)
(Ataxin-10; Brain protein E46 homolog; Spinocerebellar ataxia type 10 protein;)
genome : 46,067,756 - 46,239,867 (172,112)
query : 1 - 1,932 (1,932/1,952)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR011989 : Armadillo-like helical
IPR019156 : Ataxin-10 domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_mito 11.1667, cyto 11, mito 11, cyto_nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016581)
HIX0016581
HIT000267502
(
CR456568
)
(Ataxin-10; Brain protein E46 homolog; Spinocerebellar ataxia type 10 protein;)
genome : 46,067,893 - 46,239,597 (171,705)
query : 1 - 1,525 (1,525/1,525)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR011989 : Armadillo-like helical
IPR019156 : Ataxin-10 domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_mito 11.1667, cyto 11, mito 11, cyto_nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016581)
HIX0016581
HIT000020164
(
AK095309
)
(Ataxin-10; Brain protein E46 homolog; Spinocerebellar ataxia type 10 protein;)
genome : 46,067,917 - 46,240,829 (172,913)
query : 1 - 2,740 (2,740/2,740)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.995;1.000)3'
coverage = 1.000
InterPro :
IPR011989 : Armadillo-like helical
IPR019156 : Ataxin-10 domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 13.5, cyto 8.5, cyto_mito 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016581)
HIX0016581
HIT000268231
(
CR457381
)
(Ataxin-10 domain containing protein.)
genome : 46,067,944 - 46,239,057 (171,114)
query : 1 - 1,424 (1,424/1,428)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 0.997
InterPro :
IPR011989 : Armadillo-like helical
IPR019156 : Ataxin-10 domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_mito 11.1667, cyto 11, mito 11, cyto_nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016581)
HIX0016581
HIT000532960 (
ENST00000435026
)
(Ataxin-10 domain containing protein.)
genome : 46,125,321 - 46,219,157 (93,837)
query : 1 - 653 (653/653)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 15, cyto 8.5, cyto_nucl 7, nucl 4.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016581)
HIX0016581
HIT000597072 (
ENST00000493643
)
(Ataxin-10 domain containing protein.)
genome : 46,134,354 - 46,239,058 (104,705)
query : 1 - 614 (614/617)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 9.5, cyto_nucl 6.5, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016581)
HIX0016581
HIT000549175 (
ENST00000451241
)
(Ataxin-10 domain containing protein.)
genome : 46,134,619 - 46,207,674 (73,056)
query : 1 - 514 (514/514)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, cyto_nucl 10.5, extr 10, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016581)
HIX0227362
HIT000108551 (
ENST00000262735
)
(Peroxisome proliferator-activated receptor, alpha family protein.)
genome : 46,546,499 - 46,639,653 (93,155)
query : 1 - 9,965 (9,965/9,965)
8 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227362)
HIX0227362
HIT000201754 (
NM_005036
)
(Peroxisome proliferator-activated receptor, alpha family protein.)
genome : 46,546,499 - 46,639,653 (93,155)
query : 1 - 10,049 (10,049/10,049)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227362)
HIX0227362
HIT000315552 (
NM_001001928
)
(Peroxisome proliferator-activated receptor, alpha family protein.)
genome : 46,546,499 - 46,639,653 (93,155)
query : 1 - 9,965 (9,965/9,965)
8 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227362)
HIX0227362
HIT000479357 (
ENST00000396000
)
(Peroxisome proliferator-activated receptor, alpha family protein.)
genome : 46,546,499 - 46,639,653 (93,155)
query : 1 - 10,048 (10,048/10,048)
8 exons
identity = 1.000
5'(1.000;0.972;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227362)
HIX0227362
HIT000505900 (
ENST00000407236
)
(Peroxisome proliferator-activated receptor, alpha family protein.)
genome : 46,547,787 - 46,639,652 (91,866)
query : 1 - 9,995 (9,995/9,995)
8 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227362)
HIX0197647
pHIT000037471 ( pHIT000037471 )
Representative transcript
(Hypothetical short protein.)
genome : 45,361,711 - 45,380,755 (19,045)
query : 1 - 183 (183/183)
2 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0197647)
CAGE tag :
H09BA15I1504,H39BB51M0915,H40BC38F0114
HIX0197267
pHIT000123029 ( pHIT000123029 )
Representative transcript
(Hypothetical protein.)
genome : 46,374,697 - 46,457,952 (83,256)
query : 1 - 783 (783/783)
2 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0197267)
CAGE tag :
T22F02AAD3ED
HIX0197682
pHIT000123035 ( pHIT000123035 )
Representative transcript
(Hypothetical short protein.)
genome : 46,448,933 - 46,458,695 (9,763)
query : 1 - 198 (198/198)
2 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0197682)
CAGE tag :
T22F02AC06B3
HIX0197649
pHIT000037491 ( pHIT000037491 )
Representative transcript
(Hypothetical protein.)
genome : 46,474,333 - 46,475,922 (1,590)
query : 1 - 243 (243/243)
2 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0197649)
CAGE tag :
H08BA13N1901,H08BA37D0209,H08BA42K0101
H08BA44L2205,H08BA58I0901
AL022333.1
45000001-45026903 F +
NCBI
Z98743.1
45026904-45119275 F +
NCBI
Z93244.1
45119276-45210529 F +
NCBI
Z83838.2
45210530-45345688 F +
NCBI
AL079301.14
45345689-45403286 F +
NCBI
AL049760.26
45403287-45522304 F +
NCBI
Z82243.1
45522305-45574324 F +
NCBI
AL008718.23
45574325-45763056 F +
NCBI
AL021391.2
45763057-45901085 F +
NCBI
Z98047.1
45901086-45948527 F +
NCBI
Z95331.2
45948528-46076010 F +
NCBI
Z93784.1
46076011-46165234 F +
NCBI
Z84478.1
46165235-46265013 F +
NCBI
BX324167.9
46265014-46298446 F -
NCBI
BX511035.7
46298447-46367270 F +
NCBI
CR536603.4
46367271-46375515 F +
NCBI
CR956437.2
46375516-46377840 F +
NCBI
CR933557.2
46377841-46388071 F +
NCBI
BX537318.11
46388072-46422116 F +
NCBI
AL929387.7
46422117-46444903 F +
NCBI
AL121672.30
46444904-46489849 F +
NCBI
AL049853.1
46489850-46526634 F -
NCBI
Z94161.5
46526635-46570668 F -
NCBI
AL049856.1
46570669-46600000 F -
NCBI