bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0019512
HIT000252442
(
AY358398
)
(Transmembrane protease serine 6; EC=3.4.21.-; Matriptase-2;)
genome : 37,461,479 - 37,505,449 (43,971)
query : 1 - 3,122 (3,122/3,143)
18 exons
identity = 0.999
3'(1.000)5'
coverage = 1.000
EC number :
EC 3.4.21.-
InterPro :
IPR000082 : SEA domain
IPR000859 : CUB domain
IPR001254 : Peptidase S1
IPR001314 : Peptidase S1A, chymotrypsin-type
IPR002172 : Low-density lipoprotein (LDL) receptor class A repeat
IPR009003 : Trypsin-like cysteine/serine peptidase domain
IPR018114 : Peptidase S1, trypsin family, active site
GO :
0003824 : Molecular Function : catalytic activity
0004252 : Molecular Function : serine-type endopeptidase activity
0005515 : Molecular Function : protein binding
0006508 : Biological Process : proteolysis
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019512)
HIX0019512
HIT000505753 (
ENST00000406856
)
(Transmembrane protease serine 6; EC=3.4.21.-; Matriptase-2;)
genome : 37,461,479 - 37,505,603 (44,125)
query : 1 - 3,178 (3,178/3,178)
19 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
EC number :
EC 3.4.21.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019512)
HIX0019512
HIT000505706 (
ENST00000406725
)
(Transmembrane protease serine 6; EC=3.4.21.-; Matriptase-2;)
genome : 37,461,479 - 37,505,449 (43,971)
query : 1 - 3,122 (3,122/3,122)
18 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
EC number :
EC 3.4.21.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019512)
HIX0019512
HIT000267380
(
CR456446
)
(Transmembrane protease serine 6; EC=3.4.21.-; Matriptase-2;)
genome : 37,461,966 - 37,505,603 (43,638)
query : 1 - 2,691 (2,691/2,691)
19 exons
identity = 0.999
3'(0.984)5'
coverage = 1.000
EC number :
EC 3.4.21.-
InterPro :
IPR000082 : SEA domain
IPR000859 : CUB domain
IPR001254 : Peptidase S1
IPR001314 : Peptidase S1A, chymotrypsin-type
IPR002172 : Low-density lipoprotein (LDL) receptor class A repeat
IPR009003 : Trypsin-like cysteine/serine peptidase domain
IPR018114 : Peptidase S1, trypsin family, active site
GO :
0003824 : Molecular Function : catalytic activity
0004252 : Molecular Function : serine-type endopeptidase activity
0005515 : Molecular Function : protein binding
0006508 : Biological Process : proteolysis
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019512)
HIX0203183
HIT000039961
(
BC025691
)
(Interleukin-2 receptor subunit beta; IL-2 receptor subunit beta; IL-2R subunit beta; IL-2RB; High affinity IL-2 receptor subunit beta; p70-75; p75; AltName: CD_antigen=CD122; Precursor;)
genome : 37,521,895 - 37,545,945 (24,051)
query : 1 - 4,011 (4,011/4,035)
10 exons
identity = 0.999
3'(0.999;1.000;0.991;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003531 : Short hematopoietin receptor, family 1, conserved site
IPR003961 : Fibronectin type III
GO :
0004896 : Molecular Function : cytokine receptor activity
0005515 : Molecular Function : protein binding
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 11.5, E.R. 10.5, extr_plas 10, extr 7.5,
E.R._golg 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203183)
HIX0203183
HIT000197888 (
NM_000878
)
(Interleukin-2 receptor subunit beta; IL-2 receptor subunit beta; IL-2R subunit beta; IL-2RB; High affinity IL-2 receptor subunit beta; p70-75; p75; AltName: CD_antigen=CD122; Precursor;)
genome : 37,521,878 - 37,545,962 (24,085)
query : 1 - 4,045 (4,045/4,050)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 11.5, E.R. 10.5, extr_plas 10, extr 7.5,
E.R._golg 6.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203183)
HIX0203183
HIT000103026 (
ENST00000216223
)
(Interleukin-2 receptor subunit beta; IL-2 receptor subunit beta; IL-2R subunit beta; IL-2RB; High affinity IL-2 receptor subunit beta; p70-75; p75; AltName: CD_antigen=CD122; Precursor;)
genome : 37,521,878 - 37,546,030 (24,153)
query : 1 - 4,113 (4,113/4,113)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 11.5, E.R. 10.5, extr_plas 10, extr 7.5,
E.R._golg 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203183)
HIX0203183
HIT000195031
(
M26062
)
Representative transcript
(Interleukin-2 receptor subunit beta; IL-2 receptor subunit beta; IL-2R subunit beta; IL-2RB; High affinity IL-2 receptor subunit beta; p70-75; p75; AltName: CD_antigen=CD122; Precursor;)
genome : 37,521,887 - 37,545,962 (24,076)
query : 1 - 4,034 (4,034/4,034)
10 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003531 : Short hematopoietin receptor, family 1, conserved site
IPR003961 : Fibronectin type III
GO :
0004896 : Molecular Function : cytokine receptor activity
0005515 : Molecular Function : protein binding
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 11.5, E.R. 10.5, extr_plas 10, extr 7.5,
E.R._golg 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203183)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK017288
Macaca
sp. (Macaque) : DQ223724
Pan
sp. (Chimpanzee) : DQ223725
Equus
sp. (Horse) : ENSECAT00000016992
Pongo
sp. (Orangutan) : ENSPPYT00000013688
Monodelphis
sp. (Opossum) : XM_001376305
Gallus
sp. (Chicken) : XM_416281
Bos
sp. (Cow) : XM_587301
HIX0203183
HIT000267440
(
CR456506
)
(Interleukin-2 receptor subunit beta; IL-2 receptor subunit beta; IL-2R subunit beta; IL-2RB; High affinity IL-2 receptor subunit beta; p70-75; p75; AltName: CD_antigen=CD122; Precursor;)
genome : 37,524,065 - 37,540,231 (16,167)
query : 1 - 1,746 (1,746/1,746)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003531 : Short hematopoietin receptor, family 1, conserved site
IPR003961 : Fibronectin type III
GO :
0004896 : Molecular Function : cytokine receptor activity
0005515 : Molecular Function : protein binding
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 11.5, E.R. 10.5, extr_plas 10, extr 7.5,
E.R._golg 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203183)
HIX0203183
HIT000431726
(
AK312860
)
(Interleukin-2 receptor subunit beta; IL-2 receptor subunit beta; IL-2R subunit beta; IL-2RB; High affinity IL-2 receptor subunit beta; p70-75; p75; AltName: CD_antigen=CD122; Precursor;)
genome : 37,524,136 - 37,545,956 (21,821)
query : 1 - 1,781 (1,781/1,781)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003531 : Short hematopoietin receptor, family 1, conserved site
IPR003961 : Fibronectin type III
GO :
0004896 : Molecular Function : cytokine receptor activity
0005515 : Molecular Function : protein binding
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 11.5, E.R. 10.5, extr_plas 10, extr 7.5,
E.R._golg 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203183)
HIX0203183
HIT000587456 (
ENST00000483573
)
(Interleukin-2 receptor subunit beta; IL-2 receptor subunit beta; IL-2R subunit beta; IL-2RB; High affinity IL-2 receptor subunit beta; p70-75; p75; AltName: CD_antigen=CD122; Precursor;)
genome : 37,524,562 - 37,532,448 (7,887)
query : 1 - 708 (708/708)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 9.5, cyto_nucl 8.5, nucl 6.5, plas 6, pero 4,
mito 3, cysk_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203183)
HIX0203183
HIT000551896 (
ENST00000453962
)
(Interleukin-2 receptor subunit beta; IL-2 receptor subunit beta; IL-2R subunit beta; IL-2RB; High affinity IL-2 receptor subunit beta; p70-75; p75; AltName: CD_antigen=CD122; Precursor;)
genome : 37,532,405 - 37,571,094 (38,690)
query : 1 - 660 (660/660)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203183)
HIX0203183
HIT000527556 (
ENST00000429622
)
(Interleukin-2 receptor subunit beta; IL-2 receptor subunit beta; IL-2R subunit beta; IL-2RB; High affinity IL-2 receptor subunit beta; p70-75; p75; AltName: CD_antigen=CD122; Precursor;)
genome : 37,533,725 - 37,571,094 (37,370)
query : 1 - 569 (569/569)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203183)
HIX0203183
HIT000566482 (
ENST00000461607
)
(Interleukin-2 receptor subunit beta; IL-2 receptor subunit beta; IL-2R subunit beta; IL-2RB; High affinity IL-2 receptor subunit beta; p70-75; p75; AltName: CD_antigen=CD122; Precursor;)
genome : 37,535,112 - 37,571,094 (35,983)
query : 1 - 563 (563/563)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203183)
HIX0203183
HIT000538892 (
ENST00000440958
)
(Interleukin-2 receptor subunit beta; IL-2 receptor subunit beta; IL-2R subunit beta; IL-2RB; High affinity IL-2 receptor subunit beta; p70-75; p75; AltName: CD_antigen=CD122; Precursor;)
genome : 37,535,183 - 37,539,661 (4,479)
query : 1 - 499 (499/499)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto_nucl 5.66667, nucl 5.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203183)
HIX0203183
HIT000543529 (
ENST00000445595
)
(Interleukin-2 receptor subunit beta; IL-2 receptor subunit beta; IL-2R subunit beta; IL-2RB; High affinity IL-2 receptor subunit beta; p70-75; p75; AltName: CD_antigen=CD122; Precursor;)
genome : 37,538,490 - 37,571,094 (32,605)
query : 1 - 587 (587/587)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203183)
HIX0213308
HIT000517062 (
ENST00000419128
)
(Conserved hypothetical protein.)
genome : 37,562,797 - 37,578,890 (16,094)
query : 1 - 630 (630/630)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 16, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213308)
HIX0203181
HIT000385279
(
AK226149
)
(Complement C1q tumor necrosis factor-related protein 6; Precursor;)
genome : 37,576,211 - 37,581,997 (5,787)
query : 150 - 3,455 (3,306/3,487)
2 exons
identity = 0.998
3'(1.000;0.993)5'
coverage = 0.957
InterPro :
IPR001073 : Complement C1q protein
IPR008160 : Collagen triple helix repeat
IPR008983 : Tumour necrosis factor-like domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 27, plas 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203181)
HIX0203181
HIT000210274 (
NM_031910
)
(Complement C1q tumor necrosis factor-related protein 6; Precursor;)
genome : 37,576,206 - 37,584,330 (8,125)
query : 1 - 2,936 (2,936/2,954)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, E.R._mito 5, mito 4.5, pero 4, lyso 4,
E.R. 2.5, cyto_pero 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203181)
HIX0203181
HIT000318581 (
NM_182486
)
(Complement C1q tumor necrosis factor-related protein 6; Precursor;)
genome : 37,576,206 - 37,584,330 (8,125)
query : 1 - 1,652 (1,652/1,670)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, E.R._mito 5, mito 4.5, pero 4, lyso 4,
E.R. 2.5, cyto_pero 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203181)
HIX0203181
HIT000252418
(
AY358374
)
(Complement C1q tumor necrosis factor-related protein 6; Precursor;)
genome : 37,576,207 - 37,591,555 (15,349)
query : 1 - 3,073 (3,073/3,089)
5 exons
identity = 0.999
3'(1.000;0.992;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001073 : Complement C1q protein
IPR008160 : Collagen triple helix repeat
IPR008983 : Tumour necrosis factor-like domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203181)
HIX0203181
HIT000038816
(
BC020551
)
(Complement C1q tumor necrosis factor-related protein 6; Precursor;)
genome : 37,576,209 - 37,584,329 (8,121)
query : 1 - 2,933 (2,933/2,948)
3 exons
identity = 0.997
3'(0.997;0.996;1.000)5'
coverage = 1.000
InterPro :
IPR001073 : Complement C1q protein
IPR008160 : Collagen triple helix repeat
IPR008983 : Tumour necrosis factor-like domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, lyso 5, pero 4, E.R._mito 2, cyto_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203181)
HIX0203181
HIT000047998
(
AK128125
)
(Complement C1q tumor necrosis factor-related protein 1 isoform 2.)
genome : 37,576,207 - 37,594,341 (18,135)
query : 1 - 5,004 (5,004/5,004)
9 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001073 : Complement C1q protein
IPR008983 : Tumour necrosis factor-like domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 10.5, nucl 8, cyto 7, extr_plas 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203181)
HIX0203181
HIT000575120 (
ENST00000470655
)
(Complement C1q tumor necrosis factor-related protein 1 isoform 2.)
genome : 37,576,207 - 37,594,341 (18,135)
query : 1 - 5,003 (5,003/5,003)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 10.5, nucl 8, cyto 7, extr_plas 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203181)
HIX0203181
HIT000130661 (
ENST00000337843
)
(Complement C1q tumor necrosis factor-related protein 6; Precursor;)
genome : 37,576,207 - 37,584,329 (8,123)
query : 1 - 2,934 (2,934/2,934)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, E.R._mito 5, mito 4.5, pero 4, lyso 4,
E.R. 2.5, cyto_pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203181)
HIX0203181
HIT000480412 (
ENST00000397110
)
(Complement C1q tumor necrosis factor-related protein 6; Precursor;)
genome : 37,576,207 - 37,584,326 (8,120)
query : 1 - 1,647 (1,647/1,647)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, E.R._mito 5, mito 4.5, pero 4, lyso 4,
E.R. 2.5, cyto_pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203181)
HIX0203181
HIT000077630
(
AF329842
)
Representative transcript
(Complement C1q tumor necrosis factor-related protein 6; Precursor;)
genome : 37,576,211 - 37,584,268 (8,058)
query : 1 - 1,586 (1,586/1,587)
4 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR001073 : Complement C1q protein
IPR008160 : Collagen triple helix repeat
IPR008983 : Tumour necrosis factor-like domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, E.R._mito 5, mito 4.5, pero 4, lyso 4,
E.R. 2.5, cyto_pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203181)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK012868
Rattus
sp. (Rat) : BC101907
Bos
sp. (Cow) : BC151625
Equus
sp. (Horse) : ENSECAT00000022263
Monodelphis
sp. (Opossum) : ENSMODT00000000794
Pongo
sp. (Orangutan) : ENSPPYT00000013689
Tetraodon
sp. (Tetraodon) : GSTENT00034828001
Takifugu
sp. (Fugu) : SINFRUT00000163556
Macaca
sp. (Macaque) : XM_001085902
Pan
sp. (Chimpanzee) : XM_001160222
Gallus
sp. (Chicken) : XM_425481
Canis
sp. (Dog) : XM_538394
Danio
sp. (Zebrafish) : XM_688410
HIX0203181
HIT000596480 (
ENST00000493023
)
(Complement C1q tumor necrosis factor-related protein 6; Precursor;)
genome : 37,576,211 - 37,581,988 (5,778)
query : 1 - 3,296 (3,296/3,296)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203181)
HIX0203181
HIT000267385
(
CR456451
)
(Complement C1q tumor necrosis factor-related protein 6; Precursor;)
genome : 37,576,800 - 37,584,280 (7,481)
query : 1 - 1,008 (1,008/1,008)
4 exons
identity = 0.998
3'(1.000;1.000;0.992;1.000)5'
coverage = 1.000
InterPro :
IPR001073 : Complement C1q protein
IPR008160 : Collagen triple helix repeat
IPR008983 : Tumour necrosis factor-like domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, lyso 5, pero 4, E.R._mito 2, cyto_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203181)
HIX0203181
HIT000106861 (
ENST00000255836
)
(Complement C1q tumor necrosis factor-related protein 6.)
genome : 37,578,130 - 37,578,845 (716)
query : 1 - 563 (563/563)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 10.5, nucl 8, cyto 7, extr_plas 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203181)
HIX0203181
HIT000532718 (
ENST00000434784
)
(Complement C1q tumor necrosis factor-related protein 6; Precursor;)
genome : 37,578,214 - 37,584,276 (6,063)
query : 1 - 975 (975/975)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, plas 5, mito 2, pero 2, mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203181)
HIX0203181
HIT000432926
(
AK314060
)
(Complement C1q tumor necrosis factor-related protein 6; Precursor;)
genome : 37,578,228 - 37,584,287 (6,060)
query : 1 - 871 (871/871)
3 exons
identity = 0.998
3'(0.998;0.996;1.000)5'
coverage = 1.000
InterPro :
IPR001073 : Complement C1q protein
IPR008160 : Collagen triple helix repeat
IPR008983 : Tumour necrosis factor-like domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, E.R._mito 5, mito 4.5, pero 4, lyso 4,
E.R. 2.5, cyto_pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203181)
HIX0203181
HIT000600366 (
ENST00000497071
)
(Conserved hypothetical protein.)
genome : 37,586,593 - 37,595,425 (8,833)
query : 1 - 688 (688/688)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 4, nucl 2, golg 2, cyto_mito 2,
cyto_pero 2, cyto_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203181)
HIX0203181
HIT000572168 (
ENST00000467564
)
(Non-protein coding transcript.)
genome : 37,586,593 - 37,593,788 (7,196)
query : 1 - 479 (479/479)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203181)
HIX0203206
HIT000125610 (
ENST00000328544
)
(Somatostatin receptor 3 family protein.)
genome : 37,600,278 - 37,608,362 (8,085)
query : 1 - 4,099 (4,099/4,099)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203206)
HIX0203206
HIT000391108
(
BC133662
)
(Hypothetical protein.)
genome : 37,600,553 - 37,601,499 (947)
query : 1 - 947 (947/948)
1 exon
identity = 0.993
3'(0.993)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 13, extr 9, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203206)
HIX0203206
HIT000423962
(
AK291165
)
Representative transcript
(Somatostatin receptor type 3; SS-3-R; SS3-R; SS3R; SSR-28;)
genome : 37,602,152 - 37,608,416 (6,265)
query : 1 - 2,276 (2,276/2,276)
2 exons
identity = 0.996
3'(0.999;0.986)5'
coverage = 1.000
InterPro :
IPR000586 : Somatostatin receptor family
IPR001856 : Somatostatin receptor 3
GO :
0004994 : Molecular Function : somatostatin receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203206)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK136904
Gallus
sp. (Chicken) : DQ003337
Danio
sp. (Zebrafish) : ENSDART00000048867
Oryzias
sp. (Medaka) : ENSORLT00000001751
Pongo
sp. (Orangutan) : ENSPPYT00000013690
Tetraodon
sp. (Tetraodon) : GSTENT00005327001
Canis
sp. (Dog) : NM_001025620
Rattus
sp. (Rat) : X63574
Macaca
sp. (Macaque) : XM_001086124
Monodelphis
sp. (Opossum) : XM_001376353
Equus
sp. (Horse) : XM_001499436
Bos
sp. (Cow) : XM_596779
HIX0203206
HIT000198057 (
NM_001051
)
(Somatostatin receptor 3 family protein.)
genome : 37,602,245 - 37,608,353 (6,109)
query : 1 - 2,123 (2,123/2,123)
2 exons
identity = 1.000
3'(1.000;0.998)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203206)
HIX0203206
HIT000504145 (
ENST00000402501
)
(Somatostatin receptor 3 family protein.)
genome : 37,602,520 - 37,607,005 (4,486)
query : 1 - 1,780 (1,780/1,780)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203206)
HIX0203206
HIT000267519
(
CR456585
)
(Somatostatin receptor type 3; SS-3-R; SS3-R; SS3R; SSR-28;)
genome : 37,602,520 - 37,606,610 (4,091)
query : 1 - 1,385 (1,385/1,385)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000586 : Somatostatin receptor family
IPR001856 : Somatostatin receptor 3
GO :
0004994 : Molecular Function : somatostatin receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203206)
HIX0203206
HIT000397443
(
M96738
)
(Somatostatin receptor 3 family protein.)
genome : 37,602,528 - 37,603,943 (1,416)
query : 1 - 1,413 (1,413/1,413)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
InterPro :
IPR000586 : Somatostatin receptor family
IPR001856 : Somatostatin receptor 3
GO :
0004994 : Molecular Function : somatostatin receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203206)
HIX0203206
HIT000335729
(
BC096829
)
(Somatostatin receptor 3 family protein.)
genome : 37,602,586 - 37,603,851 (1,266)
query : 2 - 1,266 (1,265/1,266)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 0.999
InterPro :
IPR000586 : Somatostatin receptor family
IPR001856 : Somatostatin receptor 3
GO :
0004994 : Molecular Function : somatostatin receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203206)
HIX0203206
HIT000386032
(
AY322541
)
(Somatostatin receptor 3 family protein.)
genome : 37,602,586 - 37,603,842 (1,257)
query : 1 - 1,257 (1,257/1,257)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR000586 : Somatostatin receptor family
IPR001856 : Somatostatin receptor 3
GO :
0004994 : Molecular Function : somatostatin receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203206)
HIX0203206
HIT000097097
(
BC042068
)
(Somatostatin receptor type 3; SS-3-R; SS3-R; SS3R; SSR-28;)
genome : 37,602,686 - 37,608,353 (5,668)
query : 1 - 1,682 (1,682/1,682)
2 exons
identity = 0.997
3'(0.997;0.998)5'
coverage = 1.000
InterPro :
IPR000586 : Somatostatin receptor family
IPR001856 : Somatostatin receptor 3
GO :
0004994 : Molecular Function : somatostatin receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203206)
HIX0203252
HIT000534643 (
ENST00000436709
)
(Ribosomal protein L39e family protein.)
genome : 37,611,778 - 37,611,931 (154)
query : 1 - 154 (154/154)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, mito 6, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203252)
HIX0016439
HIT000099459
(
BC051899
)
(Conserved hypothetical protein.)
genome : 37,621,311 - 37,622,046 (736)
query : 7 - 741 (735/842)
1 exon
identity = 0.993
3'(0.993)5'
coverage = 0.992
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_mito 11, mito 10.5, cyto 9.5, cyto_nucl 9.5,
cyto_pero 6.66667, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016439)
HIX0016439
HIT000030446
(
BC001485
)
Representative transcript
(Ras-related C3 botulinum toxin substrate 2; GX; Small G protein; p21-Rac2; Precursor;)
genome : 37,621,311 - 37,640,310 (19,000)
query : 1 - 1,473 (1,473/1,522)
7 exons
identity = 0.997
3'(0.997;1.000;1.000;1.000;1.000;0.986;0.987)5'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR003578 : Small GTPase superfamily, Rho type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 11.5, mito 6, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016439)
HIX0016439
HIT000199747 (
NM_002872
)
(Small GTPase superfamily protein.)
genome : 37,621,311 - 37,640,305 (18,995)
query : 1 - 1,467 (1,467/1,516)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 11.5, mito 6, extr 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016439)
HIX0016439
HIT000001811
(
AF077208
)
(Conserved hypothetical protein.)
genome : 37,621,301 - 37,622,035 (735)
query : 1 - 734 (734/761)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 10, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016439)
HIX0016439
HIT000089691
(
BC018735
)
(Small GTPase superfamily protein.)
genome : 37,621,311 - 37,627,388 (6,078)
query : 1 - 1,020 (1,020/1,039)
3 exons
identity = 0.999
3'(0.999;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 8, extr_plas 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016439)
HIX0016439
HIT000105929 (
ENST00000249071
)
(Small GTPase superfamily protein.)
genome : 37,621,301 - 37,640,310 (19,010)
query : 1 - 1,482 (1,482/1,482)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 11.5, mito 6, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016439)
HIX0016439
HIT000515924 (
ENST00000417990
)
(Conserved hypothetical protein.)
genome : 37,621,304 - 37,622,035 (732)
query : 1 - 731 (731/731)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 4.5, cyto_nucl 4.33333, cyto 3, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016439)
HIX0016439
HIT000505621 (
ENST00000406508
)
(Small GTPase superfamily protein.)
genome : 37,621,892 - 37,640,488 (18,597)
query : 1 - 893 (893/893)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, extr 11, cyto_nucl 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016439)
HIX0016439
HIT000267489
(
CR456555
)
(Ras-related C3 botulinum toxin substrate 2; GX; Small G protein; p21-Rac2; Precursor;)
genome : 37,621,970 - 37,640,221 (18,252)
query : 1 - 724 (724/724)
7 exons
identity = 0.999
3'(0.991;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR003578 : Small GTPase superfamily, Rho type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 11.5, mito 6, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016439)
HIX0016439
HIT000585194 (
ENST00000481215
)
(Small GTPase superfamily protein.)
genome : 37,622,006 - 37,627,543 (5,538)
query : 1 - 480 (480/480)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 12, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016439)
HIX0016439
HIT000505242 (
ENST00000405484
)
(Small GTPase superfamily protein.)
genome : 37,622,713 - 37,640,472 (17,760)
query : 1 - 842 (842/842)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, extr 14, cyto_nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016439)
HIX0016439
HIT000080902
(
AF498965
)
(Small GTPase superfamily protein.)
genome : 37,622,713 - 37,640,188 (17,476)
query : 1 - 579 (579/579)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR003578 : Small GTPase superfamily, Rho type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 11.5, mito 6, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016439)
HIX0016439
HIT000099839
(
BT006919
)
(Small GTPase superfamily protein.)
genome : 37,622,713 - 37,640,188 (17,476)
query : 1 - 579 (579/579)
6 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;0.986;1.000)5'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR003578 : Small GTPase superfamily, Rho type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 11.5, mito 6, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016439)
HIX0016439
HIT000195337
(
M29871
)
(Small GTPase superfamily protein.)
genome : 37,622,713 - 37,640,188 (17,476)
query : 1 - 579 (579/579)
6 exons
identity = 0.998
3'(0.992;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR003578 : Small GTPase superfamily, Rho type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 11.5, mito 6, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016439)
HIX0016439
HIT000539553 (
ENST00000441619
)
(Small GTPase superfamily protein.)
genome : 37,622,793 - 37,640,481 (17,689)
query : 1 - 705 (705/705)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 10.5, mito 9, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016439)
HIX0016439
HIT000574050 (
ENST00000469532
)
(Small GTPase superfamily protein.)
genome : 37,628,444 - 37,640,318 (11,875)
query : 1 - 752 (752/752)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 4, mito 3, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016439)
HIX0016439
HIT000021779
(
AK096924
)
(Ras-related protein ced-10; CErac1; Cell death protein 10; Cell-corpse engulfment protein ced-10; Ras-related protein rac-1; Precursor;)
genome : 37,634,295 - 37,640,299 (6,005)
query : 1 - 2,902 (2,902/2,902)
4 exons
identity = 0.997
3'(0.998;0.997;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016439)
HIX0016439
HIT000503767 (
ENST00000401529
)
(Small GTPase superfamily protein.)
genome : 37,636,845 - 37,640,288 (3,444)
query : 1 - 569 (569/569)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016439)
HIX0016440
HIT000555926 (
ENST00000457992
)
(Cytohesin-4; PH, SEC7 and coiled-coil domain-containing protein 4;)
genome : 37,678,068 - 37,693,723 (15,656)
query : 1 - 652 (652/652)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 11.5, mito 5, nucl 3.5,
mito_pero 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016440)
HIX0016440
HIT000105898 (
ENST00000248901
)
(Cytohesin-4; PH, SEC7 and coiled-coil domain-containing protein 4;)
genome : 37,678,424 - 37,711,382 (32,959)
query : 1 - 3,202 (3,202/3,202)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 16.8333, cyto_mito 11, nucl 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016440)
HIX0016440
HIT000070512
(
AF125349
)
Representative transcript
(Cytohesin-4; PH, SEC7 and coiled-coil domain-containing protein 4;)
genome : 37,678,424 - 37,710,179 (31,756)
query : 1 - 1,939 (1,939/1,939)
14 exons
identity = 0.995
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.982)3'
coverage = 1.000
InterPro :
IPR000904 : Sec7 domain
IPR001849 : Pleckstrin homology domain
IPR023394 : Sec7 domain, alpha orthogonal bundle
GO :
0005086 : Molecular Function : ARF guanyl-nucleotide exchange factor activity
0032012 : Biological Process : regulation of ARF protein signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 16.8333, cyto_mito 11, nucl 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016440)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ720815
Mus
sp. (Mouse) : AK220198
Danio
sp. (Zebrafish) : AY574952
Bos
sp. (Cow) : BT021743
Equus
sp. (Horse) : ENSECAT00000026719
Oryzias
sp. (Medaka) : ENSORLT00000013595
Pongo
sp. (Orangutan) : ENSPPYT00000013692
Pan
sp. (Chimpanzee) : ENSPTRT00000026783
Tetraodon
sp. (Tetraodon) : GSTENT00024155001
Tetraodon
sp. (Tetraodon) : GSTENT00033390001
Takifugu
sp. (Fugu) : SINFRUT00000134661
Macaca
sp. (Macaque) : XM_001086587
Monodelphis
sp. (Opossum) : XM_001366728
Canis
sp. (Dog) : XM_538391
HIX0016440
HIT000066153
(
AF075458
)
(Cytohesin-4; PH, SEC7 and coiled-coil domain-containing protein 4;)
genome : 37,678,495 - 37,711,381 (32,887)
query : 1 - 3,130 (3,130/3,150)
13 exons
identity = 0.998
5'(0.985;1.000;1.000;0.985;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR000904 : Sec7 domain
IPR001849 : Pleckstrin homology domain
IPR023394 : Sec7 domain, alpha orthogonal bundle
GO :
0005086 : Molecular Function : ARF guanyl-nucleotide exchange factor activity
0032012 : Biological Process : regulation of ARF protein signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 16.8333, cyto_mito 11, nucl 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016440)
HIX0016440
HIT000204358 (
NM_013385
)
(Cytohesin-4; PH, SEC7 and coiled-coil domain-containing protein 4;)
genome : 37,678,495 - 37,711,389 (32,895)
query : 1 - 3,138 (3,138/3,138)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 16.8333, cyto_mito 11, nucl 10.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016440)
HIX0016440
HIT000504331 (
ENST00000402997
)
(Cytohesin-4; PH, SEC7 and coiled-coil domain-containing protein 4;)
genome : 37,678,516 - 37,696,214 (17,699)
query : 1 - 633 (633/633)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, mito 4, extr 3, nucl 3, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016440)
HIX0016440
HIT000499077
(
AK304453
)
(Cytohesin-3; ARF nucleotide-binding site opener 3; Protein ARNO3; General receptor of phosphoinositides 1; Grp1; PH, SEC7 and coiled-coil domain-containing protein 3;)
genome : 37,678,523 - 37,710,124 (31,602)
query : 1 - 1,864 (1,864/1,864)
13 exons
identity = 0.998
5'(1.000;1.000;1.000;0.985;1.000;1.000;1.000;
0.993;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR000904 : Sec7 domain
IPR001849 : Pleckstrin homology domain
IPR023394 : Sec7 domain, alpha orthogonal bundle
GO :
0005086 : Molecular Function : ARF guanyl-nucleotide exchange factor activity
0032012 : Biological Process : regulation of ARF protein signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016440)
HIX0016440
HIT000505136 (
ENST00000405206
)
(Cytohesin-4; PH, SEC7 and coiled-coil domain-containing protein 4;)
genome : 37,678,528 - 37,696,312 (17,785)
query : 1 - 636 (636/636)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 14, nucl 5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016440)
HIX0016440
HIT000038127
(
BC017780
)
(Cytohesin-4; PH, SEC7 and coiled-coil domain-containing protein 4;)
genome : 37,678,556 - 37,694,414 (15,859)
query : 1 - 1,099 (1,099/1,129)
5 exons
identity = 0.999
5'(0.986;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000904 : Sec7 domain
GO :
0005086 : Molecular Function : ARF guanyl-nucleotide exchange factor activity
0032012 : Biological Process : regulation of ARF protein signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 11.5, mito 5, nucl 3.5,
mito_pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016440)
HIX0016440
HIT000574384 (
ENST00000469886
)
(Cytohesin-4; PH, SEC7 and coiled-coil domain-containing protein 4;)
genome : 37,678,556 - 37,694,443 (15,888)
query : 1 - 1,128 (1,128/1,128)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 11.5, mito 5, nucl 3.5,
mito_pero 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016440)
HIX0016440
HIT000052528
(
BC041161
)
(Cytohesin-4; PH, SEC7 and coiled-coil domain-containing protein 4;)
genome : 37,678,566 - 37,711,381 (32,816)
query : 1 - 3,059 (3,059/3,164)
13 exons
identity = 0.999
5'(1.000;1.000;1.000;0.985;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR000904 : Sec7 domain
IPR001849 : Pleckstrin homology domain
IPR023394 : Sec7 domain, alpha orthogonal bundle
GO :
0005086 : Molecular Function : ARF guanyl-nucleotide exchange factor activity
0032012 : Biological Process : regulation of ARF protein signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 16.8333, cyto_mito 11, nucl 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016440)
HIX0016440
HIT000259061
(
BC033693
)
(Cytohesin-4; PH, SEC7 and coiled-coil domain-containing protein 4;)
genome : 37,678,566 - 37,711,381 (32,816)
query : 1 - 3,664 (3,664/3,695)
13 exons
identity = 0.999
5'(1.000;1.000;1.000;0.985;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.997;0.999)3'
coverage = 1.000
InterPro :
IPR000904 : Sec7 domain
IPR023394 : Sec7 domain, alpha orthogonal bundle
GO :
0005086 : Molecular Function : ARF guanyl-nucleotide exchange factor activity
0032012 : Biological Process : regulation of ARF protein signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 10.5, extr 9, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016440)
HIX0016440
HIT000567742 (
ENST00000462927
)
(Cytohesin-4; PH, SEC7 and coiled-coil domain-containing protein 4;)
genome : 37,678,566 - 37,711,382 (32,817)
query : 1 - 3,667 (3,667/3,667)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 10.5, extr 9, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016440)
HIX0016440
HIT000584523 (
ENST00000480510
)
(Cytohesin-4; PH, SEC7 and coiled-coil domain-containing protein 4;)
genome : 37,678,568 - 37,692,644 (14,077)
query : 1 - 815 (815/815)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 16.5, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016440)
HIX0016440
HIT000007702
(
AK024428
)
(Cytohesin-3; ARF nucleotide-binding site opener 3; Protein ARNO3; General receptor of phosphoinositides 1; Grp1; PH, SEC7 and coiled-coil domain-containing protein 3; CLM3; SEC7 homolog C; mSec7-3;)
genome : 37,678,570 - 37,711,380 (32,811)
query : 1 - 4,459 (4,459/4,459)
12 exons
identity = 0.999
5'(1.000;1.000;1.000;0.985;1.000;1.000;1.000;
1.000;1.000;0.999;0.993;0.999)3'
coverage = 1.000
InterPro :
IPR000904 : Sec7 domain
IPR023394 : Sec7 domain, alpha orthogonal bundle
GO :
0005086 : Molecular Function : ARF guanyl-nucleotide exchange factor activity
0032012 : Biological Process : regulation of ARF protein signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 10.5, extr 9, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016440)
HIX0016440
HIT000537601 (
ENST00000439667
)
(Cytohesin-4; PH, SEC7 and coiled-coil domain-containing protein 4;)
genome : 37,678,572 - 37,698,060 (19,489)
query : 1 - 725 (725/725)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, extr 4, mito 4, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016440)
HIX0016440
HIT000267485
(
CR456551
)
(Cytohesin-4; PH, SEC7 and coiled-coil domain-containing protein 4;)
genome : 37,678,575 - 37,709,808 (31,234)
query : 1 - 1,477 (1,477/1,477)
13 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.993;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000904 : Sec7 domain
IPR001849 : Pleckstrin homology domain
IPR023394 : Sec7 domain, alpha orthogonal bundle
GO :
0005086 : Molecular Function : ARF guanyl-nucleotide exchange factor activity
0032012 : Biological Process : regulation of ARF protein signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 16.8333, cyto_mito 11, nucl 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016440)
HIX0016440
HIT000433918
(
AK315052
)
(Cytohesin-4; PH, SEC7 and coiled-coil domain-containing protein 4;)
genome : 37,678,588 - 37,709,552 (30,965)
query : 1 - 1,208 (1,208/1,208)
13 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.993;1.000;0.987;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000904 : Sec7 domain
IPR001849 : Pleckstrin homology domain
IPR023394 : Sec7 domain, alpha orthogonal bundle
GO :
0005086 : Molecular Function : ARF guanyl-nucleotide exchange factor activity
0032012 : Biological Process : regulation of ARF protein signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 16.8333, cyto_mito 11, nucl 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016440)
HIX0027919
HIT000050035
(
AK130764
)
Representative transcript
(Conserved hypothetical protein.)
genome : 37,682,083 - 37,684,624 (2,542)
query : 1 - 2,542 (2,542/2,542)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 11, nucl 8.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027919)
HIX0016440
HIT000572266 (
ENST00000467664
)
(Conserved hypothetical protein.)
genome : 37,688,185 - 37,690,733 (2,549)
query : 1 - 593 (593/593)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 8, mito 5, cyto_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016440)
HIX0016440
HIT000545853 (
ENST00000447919
)
(Non-protein coding transcript.)
genome : 37,696,923 - 37,699,336 (2,414)
query : 1 - 277 (277/277)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016440)
HIX0016440
HIT000004619
(
AK002145
)
(Cytohesin-4; PH, SEC7 and coiled-coil domain-containing protein 4;)
genome : 37,697,012 - 37,711,380 (14,369)
query : 2 - 2,516 (2,515/2,516)
7 exons
identity = 0.997
5'(1.000;0.993;1.000;0.987;1.000;1.000;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016440)
HIX0016440
HIT000544440 (
ENST00000446506
)
(Cytohesin-4; PH, SEC7 and coiled-coil domain-containing protein 4;)
genome : 37,706,009 - 37,709,679 (3,671)
query : 1 - 569 (569/569)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12, nucl 10.5, cyto 10.5, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016440)
HIX0016443
HIT000012089
(
AK055475
)
(Conserved hypothetical protein.)
genome : 37,735,624 - 37,781,323 (45,700)
query : 1 - 1,970 (1,970/1,970)
3 exons
identity = 0.999
3'(1.000;1.000;0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito 14, cyto_nucl 1.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0139279
HIT000457492
(
DQ590961
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,741,179 - 37,741,208 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0139279)
HIX0139024
HIT000441135
(
DQ574604
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,743,314 - 37,743,342 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0139024)
HIX0139169
HIT000450721
(
DQ584190
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,744,153 - 37,744,182 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0139169)
HIX0139205
HIT000452337
(
DQ585806
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,745,066 - 37,745,095 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0139205)
HIX0139439
HIT000468078
(
DQ601547
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,745,721 - 37,745,750 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0139439)
HIX0139352
HIT000462734
(
DQ596203
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,746,231 - 37,746,260 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0139352)
HIX0158977
HIT000440686
(
DQ574155
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,747,638 - 37,747,667 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158977)
HIX0139195
HIT000451867
(
DQ585336
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,747,801 - 37,747,830 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0139195)
HIX0016442
HIT000097542
(
BC043218
)
Representative transcript
(Conserved hypothetical protein.)
genome : 37,748,233 - 37,750,879 (2,647)
query : 3 - 1,962 (1,960/1,977)
2 exons
identity = 0.998
3'(1.000;0.998)5'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 13, extr 9, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016442)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : ENSPTRT00000048625
HIX0175490
HIT000454054_03
(
DQ587523
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,750,892 - 37,750,921 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175490)
HIX0139376
HIT000463817
(
DQ597286
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,750,975 - 37,751,004 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0139376)
HIX0139002
HIT000439189
(
DQ572658
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,751,039 - 37,751,068 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0139002)
HIX0139075
HIT000445037
(
DQ578506
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,751,074 - 37,751,104 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0139075)
HIX0139107
HIT000447124
(
DQ580593
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,751,225 - 37,751,256 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0139107)
HIX0138891
HIT000453874
(
DQ587343
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,751,350 - 37,751,380 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0138891)
HIX0139014
HIT000440036
(
DQ573505
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,751,405 - 37,751,434 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0139014)
HIX0139088
HIT000446048
(
DQ579517
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,751,435 - 37,751,464 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0139088)
HIX0139066
HIT000444272
(
DQ577741
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,751,546 - 37,751,576 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0139066)
HIX0158840
HIT000447925
(
DQ581394
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,751,671 - 37,751,701 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158840)
HIX0159009
HIT000444891
(
DQ578360
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,751,777 - 37,751,807 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159009)
HIX0158914
HIT000464282
(
DQ597751
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,751,815 - 37,751,845 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158914)
HIX0159067
HIT000454000
(
DQ587469
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,751,883 - 37,751,911 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159067)
HIX0139130
HIT000448676
(
DQ582145
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,751,912 - 37,751,941 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0139130)
HIX0139366
HIT000463591
(
DQ597060
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,752,041 - 37,752,070 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0139366)
HIX0139163
HIT000450366
(
DQ583835
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,752,162 - 37,752,189 (28)
query : 1 - 28 (28/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.933
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0139163)
HIX0139060
HIT000443842
(
DQ577311
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,752,224 - 37,752,254 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0139060)
HIX0159094
HIT000457747
(
DQ591216
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,752,652 - 37,752,681 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159094)
HIX0139124
HIT000447793
(
DQ581262
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,752,736 - 37,752,765 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0139124)
HIX0159105
HIT000462738
(
DQ596207
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,752,782 - 37,752,811 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159105)
HIX0158867
HIT000439016
(
DQ572485
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,752,853 - 37,752,882 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158867)
HIX0158918
HIT000462202
(
DQ595671
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,753,184 - 37,753,214 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158918)
HIX0158891
HIT000447459
(
DQ580928
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,753,292 - 37,753,322 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158891)
HIX0138993
HIT000438800
(
DQ572269
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,753,438 - 37,753,467 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0138993)
HIX0158894
HIT000448071
(
DQ581540
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,753,512 - 37,753,541 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158894)
HIX0139197
HIT000452022
(
DQ585491
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,753,585 - 37,753,613 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0139197)
HIX0158889
HIT000463578
(
DQ597047
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,753,722 - 37,753,753 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158889)
HIX0139007
HIT000439615
(
DQ573084
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,753,818 - 37,753,846 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0139007)
HIX0158882
HIT000443649
(
DQ577118
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,753,903 - 37,753,932 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158882)
HIX0158843
HIT000447941
(
DQ581410
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,754,051 - 37,754,082 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158843)
HIX0158865
HIT000438820
(
DQ572289
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,754,096 - 37,754,126 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158865)
HIX0158898
HIT000450204
(
DQ583673
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,754,215 - 37,754,244 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158898)
HIX0158846
HIT000457355
(
DQ590824
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,754,254 - 37,754,283 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158846)
HIX0158886
HIT000445397
(
DQ578866
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,754,357 - 37,754,387 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158886)
HIX0158863
HIT000443082
(
DQ576551
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,754,450 - 37,754,480 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158863)
HIX0159004
HIT000444178
(
DQ577647
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,754,493 - 37,754,522 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159004)
HIX0158858
HIT000445108
(
DQ578577
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,754,524 - 37,754,555 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158858)
HIX0158872
HIT000460813
(
DQ594282
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,754,604 - 37,754,635 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158872)
HIX0158860
HIT000450980
(
DQ584449
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,754,641 - 37,754,672 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158860)
HIX0139068
HIT000444540
(
DQ578009
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,754,684 - 37,754,715 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0139068)
HIX0159008
HIT000444722
(
DQ578191
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,754,748 - 37,754,778 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159008)
HIX0138853
HIT000448156
(
DQ581625
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,754,878 - 37,754,908 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0138853)
HIX0138817
HIT000443929
(
DQ577398
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,755,008 - 37,755,037 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0138817)
HIX0138995
HIT000438854
(
DQ572323
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,755,045 - 37,755,074 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0138995)
HIX0158845
HIT000464931
(
DQ598400
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,755,124 - 37,755,155 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158845)
HIX0158916
HIT000460119
(
DQ593588
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,755,236 - 37,755,266 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158916)
HIX0139029
HIT000441555
(
DQ575024
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,755,357 - 37,755,387 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0139029)
HIX0139425
HIT000467423
(
DQ600892
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,755,468 - 37,755,498 (31)
query : 1 - 31 (31/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.969
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0139425)
HIX0158847
HIT000459764
(
DQ593233
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,755,549 - 37,755,578 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158847)
HIX0158842
HIT000445219
(
DQ578688
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,755,652 - 37,755,683 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158842)
HIX0159101
HIT000461332
(
DQ594801
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,755,792 - 37,755,821 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159101)
HIX0139047
HIT000442768
(
DQ576237
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,755,916 - 37,755,946 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0139047)
HIX0158900
HIT000450539
(
DQ584008
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,755,956 - 37,755,986 (31)
query : 1 - 31 (31/31)
1 exon
identity = 0.968
3'(0.968)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158900)
HIX0159079
HIT000455227
(
DQ588696
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,756,174 - 37,756,203 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159079)
HIX0139183
HIT000451508
(
DQ584977
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,756,262 - 37,756,292 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0139183)
HIX0158868
HIT000447465
(
DQ580934
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,756,430 - 37,756,460 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158868)
HIX0158892
HIT000449373
(
DQ582842
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,756,504 - 37,756,534 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158892)
HIX0158871
HIT000440202
(
DQ573671
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,756,630 - 37,756,659 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158871)
HIX0158853
HIT000437608
(
DQ571077
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,756,704 - 37,756,734 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158853)
HIX0158876
HIT000444848
(
DQ578317
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,756,837 - 37,756,867 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158876)
HIX0138876
HIT000450359
(
DQ583828
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,756,902 - 37,756,931 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0138876)
HIX0138799
HIT000440896
(
DQ574365
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,756,953 - 37,756,982 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0138799)
HIX0138917
HIT000468001
(
DQ601470
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,757,015 - 37,757,045 (31)
query : 1 - 31 (31/31)
1 exon
identity = 0.968
3'(0.968)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0138917)
HIX0138806
HIT000438553
(
DQ572022
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,757,069 - 37,757,098 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0138806)
HIX0158844
HIT000454828
(
DQ588297
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,757,139 - 37,757,169 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158844)
HIX0158971
HIT000439416
(
DQ572885
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,757,195 - 37,757,225 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158971)
HIX0159076
HIT000454590
(
DQ588059
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,757,458 - 37,757,487 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159076)
HIX0159087
HIT000457165
(
DQ590634
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,757,559 - 37,757,589 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159087)
HIX0138918
HIT000467330
(
DQ600799
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,757,634 - 37,757,663 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0138918)
HIX0139386
HIT000464916
(
DQ598385
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,757,734 - 37,757,763 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0139386)
HIX0158915
HIT000459432
(
DQ592901
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,757,813 - 37,757,842 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158915)
HIX0158890
HIT000446799
(
DQ580268
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,757,939 - 37,757,969 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158890)
HIX0158861
HIT000468123
(
DQ601592
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,758,028 - 37,758,058 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158861)
HIX0158849
HIT000452262
(
DQ585731
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,758,135 - 37,758,164 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158849)
HIX0138878
HIT000454088
(
DQ587557
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,758,279 - 37,758,309 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0138878)
HIX0158917
HIT000461056
(
DQ594525
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,758,374 - 37,758,404 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158917)
HIX0158883
HIT000450477
(
DQ583946
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,758,491 - 37,758,522 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158883)
HIX0139035
HIT000441711
(
DQ575180
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,758,595 - 37,758,626 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0139035)
HIX0158877
HIT000441508
(
DQ574977
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,758,645 - 37,758,674 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158877)
HIX0158909
HIT000457010
(
DQ590479
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,758,803 - 37,758,832 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158909)
HIX0159068
HIT000454051
(
DQ587520
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,758,975 - 37,759,004 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159068)
HIX0158902
HIT000461632
(
DQ595101
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,759,015 - 37,759,045 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158902)
HIX0158919
HIT000465693
(
DQ599162
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,759,116 - 37,759,146 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158919)
HIX0158848
HIT000437313
(
DQ570782
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,759,158 - 37,759,188 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158848)
HIX0158854
HIT000460613
(
DQ594082
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,759,205 - 37,759,235 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158854)
HIX0158895
HIT000449859
(
DQ583328
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,759,390 - 37,759,419 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158895)
HIX0158881
HIT000450623
(
DQ584092
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,759,486 - 37,759,516 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158881)
HIX0139166
HIT000450470
(
DQ583939
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,759,525 - 37,759,554 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0139166)
HIX0139056
HIT000443172
(
DQ576641
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,759,646 - 37,759,675 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0139056)
HIX0139188
HIT000451606
(
DQ585075
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,759,733 - 37,759,764 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0139188)
HIX0158857
HIT000458229
(
DQ591698
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,759,928 - 37,759,959 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158857)
HIX0158884
HIT000461597
(
DQ595066
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,760,053 - 37,760,083 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158884)
HIX0158856
HIT000457719
(
DQ591188
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,760,192 - 37,760,222 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158856)
HIX0158875
HIT000441355
(
DQ574824
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,760,254 - 37,760,284 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158875)
HIX0139086
HIT000445721
(
DQ579190
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,760,308 - 37,760,339 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0139086)
HIX0158903
HIT000451492
(
DQ584961
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,760,572 - 37,760,601 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158903)
HIX0158862
HIT000459285
(
DQ592754
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,760,701 - 37,760,732 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158862)
HIX0158873
HIT000440624
(
DQ574093
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,760,768 - 37,760,798 (31)
query : 1 - 31 (31/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.969
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158873)
HIX0158879
HIT000463714
(
DQ597183
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,760,896 - 37,760,926 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158879)
HIX0139203
HIT000452290
(
DQ585759
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,760,957 - 37,760,987 (31)
query : 1 - 31 (31/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.969
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0139203)
HIX0139008
HIT000439776
(
DQ573245
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,761,220 - 37,761,249 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0139008)
HIX0158839
HIT000439165
(
DQ572634
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,761,286 - 37,761,317 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158839)
HIX0158874
HIT000440712
(
DQ574181
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,761,389 - 37,761,418 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158874)
HIX0159138
HIT000468339
(
DQ601808
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,761,450 - 37,761,479 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159138)
HIX0158880
HIT000443183
(
DQ576652
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,761,501 - 37,761,531 (31)
query : 1 - 31 (31/31)
1 exon
identity = 0.968
3'(0.968)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158880)
HIX0139003
HIT000439271
(
DQ572740
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,761,627 - 37,761,658 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0139003)
HIX0159103
HIT000461875
(
DQ595344
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,761,671 - 37,761,700 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159103)
HIX0158913
HIT000460731
(
DQ594200
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,761,732 - 37,761,762 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158913)
HIX0158910
HIT000453428
(
DQ586897
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,761,820 - 37,761,849 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158910)
HIX0138990
HIT000438583
(
DQ572052
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,761,897 - 37,761,927 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0138990)
HIX0159127
HIT000466021
(
DQ599490
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,761,963 - 37,761,992 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159127)
HIX0159045
HIT000450486
(
DQ583955
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,762,046 - 37,762,075 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159045)
HIX0158878
HIT000441960
(
DQ575429
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,762,146 - 37,762,176 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158878)
HIX0139193
HIT000451751
(
DQ585220
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,762,274 - 37,762,303 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0139193)
HIX0138898
HIT000455342
(
DQ588811
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,762,388 - 37,762,419 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0138898)
HIX0158855
HIT000465819
(
DQ599288
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,762,491 - 37,762,521 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158855)
HIX0158954
HIT000437142
(
DQ570611
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,762,713 - 37,762,742 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158954)
HIX0158893
HIT000460659
(
DQ594128
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,762,749 - 37,762,778 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158893)
HIX0159137
HIT000468295
(
DQ601764
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,763,031 - 37,763,060 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159137)
HIX0158838
HIT000461191
(
DQ594660
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,763,155 - 37,763,186 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158838)
HIX0158987
HIT000441708
(
DQ575177
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,763,196 - 37,763,227 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158987)
HIX0138964
HIT000437050
(
DQ570519
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,763,334 - 37,763,365 (32)
query : 1 - 32 (32/32)
1 exon
identity = 0.969
5'(0.969)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0138964)
HIX0158841
HIT000439983
(
DQ573452
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,763,334 - 37,763,364 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158841)
HIX0139306
HIT000459822
(
DQ593291
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,763,405 - 37,763,433 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0139306)
HIX0139065
HIT000444181
(
DQ577650
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,763,489 - 37,763,520 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0139065)
HIX0138854
HIT000446207
(
DQ579676
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,763,546 - 37,763,576 (31)
query : 1 - 31 (31/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.969
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0138854)
HIX0158885
HIT000449104
(
DQ582573
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,763,702 - 37,763,732 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158885)
HIX0159118
HIT000464697
(
DQ598166
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,763,790 - 37,763,819 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159118)
HIX0158904
HIT000451885
(
DQ585354
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,763,833 - 37,763,864 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158904)
HIX0158897
HIT000450041
(
DQ583510
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,763,936 - 37,763,965 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0158897)
HIX0016443
HIT000092566
(
BC032083
)
(Hypothetical short protein.)
genome : 37,764,000 - 37,764,768 (769)
query : 1 - 769 (769/831)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29, cyto_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000465417
(
DQ598886
)
(Non-protein coding transcript.)
genome : 37,763,978 - 37,764,007 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000096782
(
BC041596
)
(Conserved hypothetical protein.)
genome : 37,764,000 - 37,768,753 (4,754)
query : 1 - 2,615 (2,615/2,635)
2 exons
identity = 0.998
3'(1.000;0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 4.5, cyto_nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000317720 (
NM_052906
)
(Protein phosphatase 1 regulatory subunit 29; Extracellular leucine-rich repeat and fibronectin type III domain-containing protein 2; Leucine-rich repeat and fibronectin type-III domain-containing protein 6; Leucine-rich repeat-containing protein 62; Precursor;)
genome : 37,764,000 - 37,823,505 (59,506)
query : 1 - 8,361 (8,361/8,379)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 16, extr_plas 12, extr 6, E.R. 6, E.R._golg 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000092565
(
BC032082
)
(Conserved hypothetical protein.)
genome : 37,764,000 - 37,767,870 (3,871)
query : 18 - 3,888 (3,871/3,906)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 16.5, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000439021
(
DQ572490
)
(Non-protein coding transcript.)
genome : 37,763,982 - 37,764,011 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000001619
(
AB067491
)
Representative transcript
(Protein phosphatase 1 regulatory subunit 29; Extracellular leucine-rich repeat and fibronectin type III domain-containing protein 2; Leucine-rich repeat and fibronectin type-III domain-containing protein 6; Leucine-rich repeat-containing protein 62; Precursor;)
genome : 37,764,001 - 37,771,579 (7,579)
query : 1 - 7,579 (7,579/7,579)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 17, extr_plas 12.5, extr 6, E.R. 5.5,
E.R._golg 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC076582
Bos
sp. (Cow) : ENSBTAT00000009548
Canis
sp. (Dog) : ENSCAFT00000002344
Oryzias
sp. (Medaka) : ENSORLT00000013552
Pongo
sp. (Orangutan) : ENSPPYT00000013693
Takifugu
sp. (Fugu) : SINFRUT00000171275
Rattus
sp. (Rat) : XM_001076087
Macaca
sp. (Macaque) : XM_001086834
Monodelphis
sp. (Opossum) : XM_001376391
Equus
sp. (Horse) : XM_001500881
Gallus
sp. (Chicken) : XM_425479
Pan
sp. (Chimpanzee) : XR_023706
HIX0016443
HIT000436571
(
DQ570040
)
(Non-protein coding transcript.)
genome : 37,764,200 - 37,764,230 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000445348
(
DQ578817
)
(Non-protein coding transcript.)
genome : 37,764,202 - 37,764,232 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000445364
(
DQ578833
)
(Non-protein coding transcript.)
genome : 37,764,210 - 37,764,240 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000444209
(
DQ577678
)
(Non-protein coding transcript.)
genome : 37,764,212 - 37,764,242 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000455674
(
DQ589143
)
(Non-protein coding transcript.)
genome : 37,764,217 - 37,764,247 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000461842
(
DQ595311
)
(Non-protein coding transcript.)
genome : 37,764,340 - 37,764,369 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000449797
(
DQ583266
)
(Non-protein coding transcript.)
genome : 37,764,641 - 37,764,669 (29)
query : 3 - 31 (29/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.935
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000445862
(
DQ579331
)
(Non-protein coding transcript.)
genome : 37,764,643 - 37,764,672 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000451263
(
DQ584732
)
(Non-protein coding transcript.)
genome : 37,764,711 - 37,764,741 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000451646
(
DQ585115
)
(Non-protein coding transcript.)
genome : 37,764,711 - 37,764,741 (31)
query : 1 - 31 (31/31)
1 exon
identity = 0.968
3'(0.968)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000447523
(
DQ580992
)
(Non-protein coding transcript.)
genome : 37,764,725 - 37,764,755 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000447811
(
DQ581280
)
(Non-protein coding transcript.)
genome : 37,764,777 - 37,764,807 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000440369
(
DQ573838
)
(Non-protein coding transcript.)
genome : 37,764,781 - 37,764,809 (29)
query : 2 - 30 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000451210
(
DQ584679
)
(Non-protein coding transcript.)
genome : 37,764,811 - 37,764,841 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000445737
(
DQ579206
)
(Non-protein coding transcript.)
genome : 37,764,936 - 37,764,965 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000457894
(
DQ591363
)
(Non-protein coding transcript.)
genome : 37,764,939 - 37,764,967 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000437498
(
DQ570967
)
(Non-protein coding transcript.)
genome : 37,764,946 - 37,764,975 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000436646
(
DQ570115
)
(Non-protein coding transcript.)
genome : 37,764,947 - 37,764,975 (29)
query : 2 - 30 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000456485
(
DQ589954
)
(Non-protein coding transcript.)
genome : 37,764,985 - 37,765,013 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000465779
(
DQ599248
)
(Non-protein coding transcript.)
genome : 37,765,054 - 37,765,085 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000465778
(
DQ599247
)
(Non-protein coding transcript.)
genome : 37,765,055 - 37,765,085 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000467374
(
DQ600843
)
(Non-protein coding transcript.)
genome : 37,765,055 - 37,765,083 (29)
query : 2 - 30 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000465777
(
DQ599246
)
(Non-protein coding transcript.)
genome : 37,765,056 - 37,765,085 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000442601
(
DQ576070
)
(Non-protein coding transcript.)
genome : 37,765,092 - 37,765,121 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000442600
(
DQ576069
)
(Non-protein coding transcript.)
genome : 37,765,092 - 37,765,121 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000442602
(
DQ576071
)
(Non-protein coding transcript.)
genome : 37,765,093 - 37,765,121 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000442640
(
DQ576109
)
(Non-protein coding transcript.)
genome : 37,765,092 - 37,765,121 (30)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
3'(0.967)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000440113
(
DQ573582
)
(Non-protein coding transcript.)
genome : 37,765,119 - 37,765,148 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000447354
(
DQ580823
)
(Non-protein coding transcript.)
genome : 37,765,119 - 37,765,146 (28)
query : 3 - 30 (28/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.933
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000449044
(
DQ582513
)
(Non-protein coding transcript.)
genome : 37,765,120 - 37,765,150 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000454238
(
DQ587707
)
(Non-protein coding transcript.)
genome : 37,765,124 - 37,765,153 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000467509
(
DQ600978
)
(Non-protein coding transcript.)
genome : 37,765,165 - 37,765,194 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000467510
(
DQ600979
)
(Non-protein coding transcript.)
genome : 37,765,166 - 37,765,194 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000467511
(
DQ600980
)
(Non-protein coding transcript.)
genome : 37,765,165 - 37,765,194 (30)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
3'(0.967)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000453022
(
DQ586491
)
(Non-protein coding transcript.)
genome : 37,765,225 - 37,765,254 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000442967
(
DQ576436
)
(Non-protein coding transcript.)
genome : 37,765,228 - 37,765,257 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000439231
(
DQ572700
)
(Non-protein coding transcript.)
genome : 37,765,260 - 37,765,289 (30)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
3'(0.967)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000443885
(
DQ577354
)
(Non-protein coding transcript.)
genome : 37,765,262 - 37,765,291 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000458777
(
DQ592246
)
(Non-protein coding transcript.)
genome : 37,765,265 - 37,765,294 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000437008
(
DQ570477
)
(Non-protein coding transcript.)
genome : 37,765,270 - 37,765,299 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000439621
(
DQ573090
)
(Non-protein coding transcript.)
genome : 37,765,271 - 37,765,301 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000457125
(
DQ590594
)
(Non-protein coding transcript.)
genome : 37,765,571 - 37,765,601 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000445613
(
DQ579082
)
(Non-protein coding transcript.)
genome : 37,765,588 - 37,765,617 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000454254
(
DQ587723
)
(Non-protein coding transcript.)
genome : 37,765,592 - 37,765,622 (31)
query : 1 - 31 (31/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.969
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000454253
(
DQ587722
)
(Non-protein coding transcript.)
genome : 37,765,593 - 37,765,622 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000454255
(
DQ587724
)
(Non-protein coding transcript.)
genome : 37,765,593 - 37,765,622 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000464436
(
DQ597905
)
(Non-protein coding transcript.)
genome : 37,765,593 - 37,765,621 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000454252
(
DQ587721
)
(Non-protein coding transcript.)
genome : 37,765,594 - 37,765,622 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000444561
(
DQ578030
)
(Non-protein coding transcript.)
genome : 37,765,594 - 37,765,624 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000460355
(
DQ593824
)
(Non-protein coding transcript.)
genome : 37,765,594 - 37,765,623 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000441269
(
DQ574738
)
(Non-protein coding transcript.)
genome : 37,765,616 - 37,765,645 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000450215
(
DQ583684
)
(Non-protein coding transcript.)
genome : 37,765,647 - 37,765,677 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000437921
(
DQ571390
)
(Non-protein coding transcript.)
genome : 37,765,650 - 37,765,680 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000455922
(
DQ589391
)
(Non-protein coding transcript.)
genome : 37,765,663 - 37,765,694 (32)
query : 1 - 32 (32/32)
1 exon
identity = 0.969
3'(0.969)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000455921
(
DQ589390
)
(Non-protein coding transcript.)
genome : 37,765,664 - 37,765,694 (31)
query : 1 - 31 (31/31)
1 exon
identity = 0.968
3'(0.968)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0139177
HIT000451279
(
DQ584748
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,765,685 - 37,765,715 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0139177)
HIX0016443
HIT000458866
(
DQ592335
)
(Non-protein coding transcript.)
genome : 37,765,725 - 37,765,754 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000464671
(
DQ598140
)
(Non-protein coding transcript.)
genome : 37,765,740 - 37,765,769 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000463427
(
DQ596896
)
(Non-protein coding transcript.)
genome : 37,765,933 - 37,765,963 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000438166
(
DQ571635
)
(Non-protein coding transcript.)
genome : 37,765,936 - 37,765,964 (29)
query : 2 - 30 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000465044
(
DQ598513
)
(Non-protein coding transcript.)
genome : 37,765,936 - 37,765,965 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000458091
(
DQ591560
)
(Non-protein coding transcript.)
genome : 37,765,938 - 37,765,966 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000440709
(
DQ574178
)
(Non-protein coding transcript.)
genome : 37,765,951 - 37,765,981 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000440708
(
DQ574177
)
(Non-protein coding transcript.)
genome : 37,765,952 - 37,765,981 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000460607
(
DQ594076
)
(Non-protein coding transcript.)
genome : 37,765,968 - 37,765,998 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000450482
(
DQ583951
)
(Non-protein coding transcript.)
genome : 37,766,026 - 37,766,055 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000445489
(
DQ578958
)
(Non-protein coding transcript.)
genome : 37,766,150 - 37,766,179 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000454535
(
DQ588004
)
(Non-protein coding transcript.)
genome : 37,766,156 - 37,766,185 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000444475
(
DQ577944
)
(Non-protein coding transcript.)
genome : 37,766,250 - 37,766,279 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000455014
(
DQ588483
)
(Non-protein coding transcript.)
genome : 37,766,341 - 37,766,368 (28)
query : 1 - 28 (28/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.933
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000437706
(
DQ571175
)
(Non-protein coding transcript.)
genome : 37,766,433 - 37,766,462 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000456247
(
DQ589716
)
(Non-protein coding transcript.)
genome : 37,766,436 - 37,766,465 (30)
query : 1 - 30 (30/31)
1 exon
identity = 0.967
3'(0.967)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000460965
(
DQ594434
)
(Non-protein coding transcript.)
genome : 37,766,504 - 37,766,533 (30)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
3'(0.967)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000460966
(
DQ594435
)
(Non-protein coding transcript.)
genome : 37,766,504 - 37,766,533 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000457779
(
DQ591248
)
(Non-protein coding transcript.)
genome : 37,766,791 - 37,766,819 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000444673
(
DQ578142
)
(Non-protein coding transcript.)
genome : 37,766,858 - 37,766,888 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000444672
(
DQ578141
)
(Non-protein coding transcript.)
genome : 37,766,859 - 37,766,888 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000446598
(
DQ580067
)
(Non-protein coding transcript.)
genome : 37,766,957 - 37,766,984 (28)
query : 1 - 28 (28/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.933
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000454065
(
DQ587534
)
(Non-protein coding transcript.)
genome : 37,766,965 - 37,766,993 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000437882
(
DQ571351
)
(Non-protein coding transcript.)
genome : 37,767,092 - 37,767,121 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000456189
(
DQ589658
)
(Non-protein coding transcript.)
genome : 37,767,121 - 37,767,149 (29)
query : 2 - 30 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000463206
(
DQ596675
)
(Non-protein coding transcript.)
genome : 37,767,181 - 37,767,210 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000446229
(
DQ579698
)
(Non-protein coding transcript.)
genome : 37,767,248 - 37,767,278 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000446227
(
DQ579696
)
(Non-protein coding transcript.)
genome : 37,767,250 - 37,767,278 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000446228
(
DQ579697
)
(Non-protein coding transcript.)
genome : 37,767,249 - 37,767,278 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000453268
(
DQ586737
)
(Non-protein coding transcript.)
genome : 37,767,291 - 37,767,320 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000453266
(
DQ586735
)
(Non-protein coding transcript.)
genome : 37,767,292 - 37,767,320 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000453267
(
DQ586736
)
(Non-protein coding transcript.)
genome : 37,767,291 - 37,767,320 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000453270
(
DQ586739
)
(Non-protein coding transcript.)
genome : 37,767,291 - 37,767,320 (30)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
3'(0.967)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000446238
(
DQ579707
)
(Non-protein coding transcript.)
genome : 37,767,545 - 37,767,574 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000444858
(
DQ578327
)
(Non-protein coding transcript.)
genome : 37,767,549 - 37,767,577 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000464730
(
DQ598199
)
(Non-protein coding transcript.)
genome : 37,767,552 - 37,767,581 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0016443
HIT000446835
(
DQ580304
)
(Non-protein coding transcript.)
genome : 37,767,558 - 37,767,588 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016443)
HIX0041290
HIT000093048
(
BC033336
)
Representative transcript
(Hypothetical protein.)
genome : 37,767,724 - 37,768,896 (1,173)
query : 1 - 907 (907/924)
2 exons
identity = 0.998
5'(0.988;0.999)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041290)
HIX0041290
HIT000451969
(
DQ585438
)
(Non-protein coding transcript.)
genome : 37,768,637 - 37,768,667 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041290)
HIX0139064
HIT000444092
(
DQ577561
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,769,579 - 37,769,608 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0139064)
HIX0139206
HIT000452347
(
DQ585816
)
Representative transcript
(Non-protein coding transcript.)
genome : 37,779,098 - 37,779,127 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0139206)
HIX0227231
HIT000593116 (
ENST00000489515
)
(Fringe-like family protein.)
genome : 37,865,106 - 37,868,762 (3,657)
query : 1 - 615 (615/615)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227231)
HIX0227231
HIT000552225 (
ENST00000454291
)
(Conserved hypothetical protein.)
genome : 37,865,551 - 37,870,602 (5,052)
query : 1 - 570 (570/570)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 7.5, cyto 7, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227231)
HIX0227231
HIT000536825 (
ENST00000438891
)
(Fringe-like family protein.)
genome : 37,870,550 - 37,882,417 (11,868)
query : 1 - 966 (966/966)
5 exons
identity = 0.996
3'(1.000;1.000;1.000;0.963;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 3.5, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227231)
HIX0227231
HIT000534275 (
ENST00000436341
)
(Fringe-like family protein.)
genome : 37,870,601 - 37,877,409 (6,809)
query : 1 - 644 (644/644)
6 exons
identity = 0.994
3'(1.000;1.000;1.000;0.963;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227231)
HIX0227231
HIT000528345 (
ENST00000430411
)
(Fringe-like family protein.)
genome : 37,872,934 - 37,882,425 (9,492)
query : 1 - 864 (864/864)
5 exons
identity = 0.995
3'(1.000;1.000;0.963;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227231)
HIX0227231
HIT000540430 (
ENST00000442496
)
(Fringe-like family protein.)
genome : 37,875,450 - 37,880,667 (5,218)
query : 1 - 524 (524/524)
5 exons
identity = 0.992
3'(1.000;0.963;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 8.5, cyto 7.5, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227231)
HIX0227231
HIT000571569 (
ENST00000466943
)
(Conserved hypothetical protein.)
genome : 37,876,249 - 37,877,105 (857)
query : 1 - 436 (436/436)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227231)
HIX0227231
HIT000522699 (
ENST00000424765
)
(Fringe-like family protein.)
genome : 37,876,317 - 37,882,431 (6,115)
query : 1 - 570 (570/570)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227231)
HIX0213267
HIT000083300
(
AY028896
)
(Caspase recruitment domain-containing protein 10; CARD-containing MAGUK protein 3; Carma 3;)
genome : 37,886,402 - 37,915,247 (28,846)
query : 1 - 3,934 (3,934/3,949)
20 exons
identity = 0.999
3'(0.999;0.991;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.995;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001315 : CARD domain
IPR011029 : Death-like domain
GO :
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0042981 : Biological Process : regulation of apoptotic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 16, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213267)
HIX0213267
HIT000204890 (
NM_014550
)
(Caspase recruitment domain-containing protein 10; CARD-containing MAGUK protein 3; Carma 3;)
genome : 37,886,400 - 37,915,210 (28,811)
query : 1 - 3,899 (3,899/3,912)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 16, cyto 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213267)
HIX0213267
HIT000083380
(
AY032928
)
(Caspase recruitment domain-containing protein 10; CARD-containing MAGUK protein 3; Carma 3;)
genome : 37,886,402 - 37,915,210 (28,809)
query : 1 - 3,897 (3,897/3,908)
20 exons
identity = 0.999
3'(0.999;0.991;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.995;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001315 : CARD domain
IPR011029 : Death-like domain
GO :
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0042981 : Biological Process : regulation of apoptotic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 16, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213267)
HIX0213267
HIT000504437 (
ENST00000403299
)
(Caspase recruitment domain-containing protein 10; CARD-containing MAGUK protein 3; Carma 3;)
genome : 37,886,400 - 37,915,549 (29,150)
query : 1 - 4,113 (4,113/4,113)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 17, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213267)
HIX0213267
HIT000591800 (
ENST00000488141
)
(Caspase recruitment domain-containing protein 10; CARD-containing MAGUK protein 3; Carma 3;)
genome : 37,886,400 - 37,892,787 (6,388)
query : 1 - 2,169 (2,169/2,169)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto_mito 4.5, mito 4, cyto 3, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213267)
HIX0213267
HIT000013948
(
AK057334
)
(Caspase recruitment domain-containing protein 10; CARD-containing MAGUK protein 3; Carma 3;)
genome : 37,886,401 - 37,890,583 (4,183)
query : 1 - 1,910 (1,910/1,910)
5 exons
identity = 0.999
3'(1.000;0.991;1.000;1.000;0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.5, cyto_mito 10.5, cyto 9.5, mito 9.5,
nucl 9, cyto_pero 6.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213267)
HIX0213267
HIT000572410 (
ENST00000467812
)
(Caspase recruitment domain-containing protein 10; CARD-containing MAGUK protein 3; Carma 3;)
genome : 37,886,401 - 37,890,583 (4,183)
query : 1 - 1,910 (1,910/1,910)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.5, cyto_mito 10.5, cyto 9.5, mito 9.5,
nucl 9, cyto_pero 6.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213267)
HIX0213267
HIT000106221 (
ENST00000251973
)
(Caspase recruitment domain-containing protein 10; CARD-containing MAGUK protein 3; Carma 3;)
genome : 37,886,402 - 37,915,247 (28,846)
query : 1 - 3,934 (3,934/3,934)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 16, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213267)
HIX0213267
HIT000505529 (
ENST00000406271
)
(Caspase recruitment domain-containing protein 10; CARD-containing MAGUK protein 3; Carma 3;)
genome : 37,886,402 - 37,905,156 (18,755)
query : 1 - 3,127 (3,127/3,127)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10.5, nucl 10, cyto 8, E.R._mito 6,
cyto_pero 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213267)
HIX0213267
HIT000081941
(
AK074906
)
(Caspase recruitment domain-containing protein 10; CARD-containing MAGUK protein 3; Carma 3;)
genome : 37,886,403 - 37,905,156 (18,754)
query : 1 - 3,126 (3,126/3,126)
17 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.991;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10.5, nucl 10, cyto 8, E.R._mito 6,
cyto_pero 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213267)
HIX0213267
HIT000490800
(
AK296176
)
(Caspase recruitment domain-containing protein 10; CARD-containing MAGUK protein 3; Carma 3;)
genome : 37,887,085 - 37,892,787 (5,703)
query : 1 - 1,484 (1,484/1,484)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto_mito 4.5, mito 4, cyto 3, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213267)
HIX0213267
HIT000387112
(
BC113659
)
Representative transcript
(Caspase recruitment domain-containing protein 10; CARD-containing MAGUK protein 3; Carma 3;)
genome : 37,887,124 - 37,915,228 (28,105)
query : 1 - 3,193 (3,193/3,193)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001315 : CARD domain
IPR011029 : Death-like domain
GO :
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0042981 : Biological Process : regulation of apoptotic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 16, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213267)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC060203
Canis
sp. (Dog) : ENSCAFT00000002340
Gallus
sp. (Chicken) : ENSGALT00000020331
Macaca
sp. (Macaque) : ENSMMUT00000004261
Monodelphis
sp. (Opossum) : ENSMODT00000000709
Oryzias
sp. (Medaka) : ENSORLT00000018060
Tetraodon
sp. (Tetraodon) : GSTENT00006490001
Takifugu
sp. (Fugu) : SINFRUT00000160860
Rattus
sp. (Rat) : XM_001076142
Pan
sp. (Chimpanzee) : XM_001160660
Equus
sp. (Horse) : XM_001500903
Bos
sp. (Cow) : XM_615197
HIX0213267
HIT000387693
(
BC117403
)
(Caspase recruitment domain-containing protein 10; CARD-containing MAGUK protein 3; Carma 3;)
genome : 37,887,125 - 37,915,228 (28,104)
query : 1 - 3,186 (3,186/3,186)
20 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.971;1.000;1.000;0.992)5'
coverage = 1.000
InterPro :
IPR001315 : CARD domain
IPR011029 : Death-like domain
GO :
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0042981 : Biological Process : regulation of apoptotic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 16, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213267)
HIX0213267
HIT000067203
(
AF086324
)
(Caspase recruitment domain-containing protein 10; CARD-containing MAGUK protein 3; Carma 3;)
genome : 37,887,283 - 37,888,561 (1,279)
query : 1 - 385 (385/385)
3 exons
identity = 0.997
3'(1.000;1.000;0.992)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 6.5, cyto_nucl 6, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213267)
HIX0213267
HIT000092550
(
BC032058
)
(Caspase recruitment domain-containing protein 10; CARD-containing MAGUK protein 3; Carma 3;)
genome : 37,888,768 - 37,908,248 (19,481)
query : 1 - 2,146 (2,146/2,146)
15 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.993;1.000;1.000;1.000;0.972;
0.994)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 16.5, cyto 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213267)
HIX0213267
HIT000535690 (
ENST00000437756
)
(Caspase recruitment domain-containing protein 10; CARD-containing MAGUK protein 3; Carma 3;)
genome : 37,888,768 - 37,908,248 (19,481)
query : 1 - 2,140 (2,140/2,140)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 16.5, cyto 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213267)
HIX0213267
HIT000589890 (
ENST00000486118
)
(Caspase recruitment domain-containing protein 10; CARD-containing MAGUK protein 3; Carma 3;)
genome : 37,891,857 - 37,893,242 (1,386)
query : 1 - 546 (546/546)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, extr 11, cyto 5, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213267)
HIX0213267
HIT000531419 (
ENST00000433485
)
(Caspase recruitment domain-containing protein 10; CARD-containing MAGUK protein 3; Carma 3;)
genome : 37,891,908 - 37,900,087 (8,180)
query : 1 - 578 (578/578)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 14.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213267)
HIX0213267
HIT000581043 (
ENST00000476871
)
(Caspase recruitment domain-containing protein 10; CARD-containing MAGUK protein 3; Carma 3;)
genome : 37,903,889 - 37,906,572 (2,684)
query : 1 - 583 (583/583)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 11, cyto 7.5, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213267)
HIX0213267
HIT000597573 (
ENST00000494166
)
(Caspase recruitment domain-containing protein 10; CARD-containing MAGUK protein 3; Carma 3;)
genome : 37,904,534 - 37,910,812 (6,279)
query : 1 - 560 (560/560)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 6, cyto_nucl 6, mito 5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213267)
HIX0175655
HIT000526772 (
ENST00000428838
)
(Conserved hypothetical protein.)
genome : 37,946,033 - 37,947,742 (1,710)
query : 1 - 498 (498/498)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 13, cyto 10.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175655)
HIX0016445
HIT000105919 (
ENST00000249014
)
(Cdc42 effector protein 1; Binder of Rho GTPases 5; Serum protein MSE55;)
genome : 37,956,454 - 37,965,412 (8,959)
query : 1 - 2,181 (2,181/2,181)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, nucl 4, cyto_nucl 4, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016445)
HIX0016445
HIT000213527 (
NM_152243
)
(Cdc42 effector protein 1; Binder of Rho GTPases 5; Serum protein MSE55;)
genome : 37,956,471 - 37,965,409 (8,939)
query : 1 - 2,161 (2,161/2,182)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, nucl 4, cyto_nucl 4, cyto 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016445)
HIX0016445
HIT000528621 (
ENST00000430687
)
(Cdc42 effector protein 1; Binder of Rho GTPases 5; Serum protein MSE55;)
genome : 37,956,487 - 37,962,566 (6,080)
query : 1 - 720 (720/720)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, nucl 3, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016445)
HIX0016445
HIT000034303
(
BC009356
)
(Cdc42 effector protein 1; Binder of Rho GTPases 5; Serum protein MSE55;)
genome : 37,956,501 - 37,965,409 (8,909)
query : 1 - 2,110 (2,110/2,131)
3 exons
identity = 0.986
5'(1.000;1.000;0.978)3'
coverage = 1.000
InterPro :
IPR000095 : CRIB domain
IPR029273 : Cdc42 effector
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, nucl 4.5, cyto_nucl 3.5, cyto 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016445)
HIX0016445
HIT000424987
(
AK292190
)
(Cdc42 effector protein 1; Binder of Rho GTPases 5; Serum protein MSE55;)
genome : 37,956,505 - 37,965,075 (8,571)
query : 1 - 1,772 (1,772/1,772)
3 exons
identity = 0.983
5'(1.000;1.000;0.969)3'
coverage = 1.000
InterPro :
IPR000095 : CRIB domain
IPR029273 : Cdc42 effector
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, nucl 4.5, cyto_nucl 3.5, cyto 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016445)
HIX0016445
HIT000196708
(
M88338
)
Representative transcript
(Cdc42 effector protein 1; Binder of Rho GTPases 5; Serum protein MSE55;)
genome : 37,956,527 - 37,965,327 (8,801)
query : 2 - 2,030 (2,029/2,030)
3 exons
identity = 0.995
5'(0.971;1.000;0.993)3'
coverage = 1.000
InterPro :
IPR000095 : CRIB domain
IPR029273 : Cdc42 effector
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, nucl 4, cyto_nucl 4, cyto 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016445)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK007896
Bos
sp. (Cow) : BC118148
Rattus
sp. (Rat) : BC128744
Canis
sp. (Dog) : ENSCAFT00000002338
Pongo
sp. (Orangutan) : ENSPPYT00000013695
Macaca
sp. (Macaque) : XM_001086940
Monodelphis
sp. (Opossum) : XM_001376425
Equus
sp. (Horse) : XM_001916753
Pan
sp. (Chimpanzee) : XR_023752
HIX0016445
HIT000513604 (
ENST00000415670
)
(Cdc42 effector protein 1; Binder of Rho GTPases 5; Serum protein MSE55;)
genome : 37,959,661 - 37,962,537 (2,877)
query : 1 - 588 (588/588)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto_nucl 3.5, nucl 3, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016445)
HIX0016445
HIT000532662 (
ENST00000434728
)
(Conserved hypothetical protein.)
genome : 37,960,413 - 37,962,502 (2,090)
query : 1 - 564 (564/564)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, extr 12, cyto 3, cyto_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016445)
HIX0016445
HIT000267458
(
CR456524
)
(Cdc42 effector protein 1; Binder of Rho GTPases 5; Serum protein MSE55;)
genome : 37,962,215 - 37,964,927 (2,713)
query : 1 - 1,418 (1,418/1,418)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000095 : CRIB domain
IPR029273 : Cdc42 effector
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, nucl 4, cyto_nucl 4, cyto 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016445)
HIX0016446
HIT000260016
(
BC059782
)
(Galectin-2; Gal-2; Beta-galactoside-binding lectin L-14-II; HL14; Lactose-binding lectin 2; S-Lac lectin 2;)
genome : 37,966,253 - 37,975,950 (9,698)
query : 1 - 454 (454/510)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001079 : Galectin, carbohydrate recognition domain
IPR013320 : Concanavalin A-like lectin/glucanase domain
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 10, extr 6, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016446)
HIX0016446
HIT000040676
(
BC029063
)
(Galectin-2; Gal-2; Beta-galactoside-binding lectin L-14-II; HL14; Lactose-binding lectin 2; S-Lac lectin 2;)
genome : 37,966,253 - 37,967,938 (1,686)
query : 1 - 410 (410/439)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001079 : Galectin, carbohydrate recognition domain
IPR013320 : Concanavalin A-like lectin/glucanase domain
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, extr 10, cyto_nucl 9.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016446)
HIX0016446
HIT000203093 (
NM_006498
)
(Galectin-2; Gal-2; Beta-galactoside-binding lectin L-14-II; HL14; Lactose-binding lectin 2; S-Lac lectin 2;)
genome : 37,966,253 - 37,976,024 (9,772)
query : 1 - 528 (528/543)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 10, extr 6, mito 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016446)
HIX0016446
HIT000102949 (
ENST00000215886
)
(Galectin-2; Gal-2; Beta-galactoside-binding lectin L-14-II; HL14; Lactose-binding lectin 2; S-Lac lectin 2;)
genome : 37,966,255 - 37,976,087 (9,833)
query : 1 - 589 (589/589)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 10, extr 6, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016446)
HIX0016446
HIT000194295
(
M14079
)
(Galectin-2; Gal-2; Beta-galactoside-binding lectin L-14-II; HL14; Lactose-binding lectin 2; S-Lac lectin 2;)
genome : 37,966,264 - 37,967,931 (1,668)
query : 1 - 392 (392/393)
3 exons
identity = 0.995
3'(0.994;0.994;1.000)5'
coverage = 0.997
InterPro :
IPR001079 : Galectin, carbohydrate recognition domain
IPR013320 : Concanavalin A-like lectin/glucanase domain
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 12, nucl 5.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016446)
HIX0016446
HIT000267446
(
CR456512
)
Representative transcript
(Galectin-2; Gal-2; Beta-galactoside-binding lectin L-14-II; HL14; Lactose-binding lectin 2; S-Lac lectin 2;)
genome : 37,966,265 - 37,976,064 (9,800)
query : 1 - 556 (556/556)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001079 : Galectin, carbohydrate recognition domain
IPR013320 : Concanavalin A-like lectin/glucanase domain
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 10, extr 6, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016446)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AB001075
Mus
sp. (Mouse) : AK008636
Danio
sp. (Zebrafish) : BC076353
Bos
sp. (Cow) : BC120473
Gallus
sp. (Chicken) : BX930674
Tetraodon
sp. (Tetraodon) : CR701647
Oryzias
sp. (Medaka) : ENSORLT00000013427
Pongo
sp. (Orangutan) : ENSPPYT00000013696
Macaca
sp. (Macaque) : XM_001087063
Monodelphis
sp. (Opossum) : XM_001376435
Equus
sp. (Horse) : XM_001499516
Pan
sp. (Chimpanzee) : XM_525588
Canis
sp. (Dog) : XM_531742
HIX0016446
HIT000196677
(
M87842
)
(Galectin-2; Gal-2; Beta-galactoside-binding lectin L-14-II; HL14; Lactose-binding lectin 2; S-Lac lectin 2;)
genome : 37,966,266 - 37,975,938 (9,673)
query : 1 - 429 (429/429)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001079 : Galectin, carbohydrate recognition domain
IPR013320 : Concanavalin A-like lectin/glucanase domain
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 10, extr 6, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016446)
HIX0016446
HIT000268842
(
CR541972
)
(Galectin-2; Gal-2; Beta-galactoside-binding lectin L-14-II; HL14; Lactose-binding lectin 2; S-Lac lectin 2;)
genome : 37,966,270 - 37,967,939 (1,670)
query : 6 - 399 (394/399)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.987
InterPro :
IPR001079 : Galectin, carbohydrate recognition domain
IPR013320 : Concanavalin A-like lectin/glucanase domain
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 10, extr 6, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016446)
HIX0016446
HIT000268869
(
CR542000
)
(Galectin-2; Gal-2; Beta-galactoside-binding lectin L-14-II; HL14; Lactose-binding lectin 2; S-Lac lectin 2;)
genome : 37,966,273 - 37,967,939 (1,667)
query : 6 - 396 (391/396)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.987
InterPro :
IPR001079 : Galectin, carbohydrate recognition domain
IPR013320 : Concanavalin A-like lectin/glucanase domain
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 10, extr 6, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016446)
HIX0016446
HIT000514414 (
ENST00000416480
)
(Galectin-2; Gal-2; Beta-galactoside-binding lectin L-14-II; HL14; Lactose-binding lectin 2; S-Lac lectin 2;)
genome : 37,967,856 - 37,978,623 (10,768)
query : 1 - 406 (406/406)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016446)
HIX0016447
HIT000315418 (
NM_001001561
)
(VHS domain containing protein.)
genome : 38,004,481 - 38,014,127 (9,647)
query : 1 - 1,714 (1,714/1,714)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 10.5, cyto 10, nucl 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016447)
HIX0016447
HIT000512284 (
ENST00000414350
)
(VHS domain containing protein.)
genome : 38,004,481 - 38,014,127 (9,647)
query : 1 - 1,714 (1,714/1,714)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 10.5, cyto 10, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016447)
HIX0016447
HIT000087564
(
BC010917
)
Representative transcript
(ADP-ribosylation factor-binding protein GGA1; Gamma-adaptin-related protein 1; Golgi-localized, gamma ear-containing, ARF-binding protein 1;)
genome : 38,004,837 - 38,014,130 (9,294)
query : 1 - 1,361 (1,361/1,389)
3 exons
identity = 0.998
5'(0.986;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR002014 : VHS
IPR008942 : ENTH/VHS
GO :
0006886 : Biological Process : intracellular protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 10.5, cyto 10, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016447)
HIX0016447
HIT000593363 (
ENST00000489772
)
(VHS domain containing protein.)
genome : 38,004,837 - 38,014,130 (9,294)
query : 1 - 1,361 (1,361/1,384)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 10.5, cyto 10, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016447)
HIX0016447
HIT000505109 (
ENST00000405147
)
(VHS domain containing protein.)
genome : 38,004,841 - 38,016,051 (11,211)
query : 1 - 575 (575/575)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, extr 12, cyto_nucl 9, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016447)
HIX0016447
HIT000527152 (
ENST00000429218
)
(VHS domain containing protein.)
genome : 38,004,842 - 38,016,923 (12,082)
query : 1 - 553 (553/566)
6 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;0.990)3'
coverage = 0.977
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, cyto 10, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016447)
HIX0016447
HIT000040742
(
BC029388
)
(ADP-ribosylation factor-binding protein GGA1; Gamma-adaptin-related protein 1; Golgi-localized, gamma ear-containing, ARF-binding protein 1;)
genome : 38,004,842 - 38,013,839 (8,998)
query : 1 - 1,065 (1,065/1,095)
3 exons
identity = 0.998
5'(1.000;1.000;0.998)3'
coverage = 0.999
InterPro :
IPR002014 : VHS
IPR008942 : ENTH/VHS
GO :
0006886 : Biological Process : intracellular protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 10.5, cyto 10, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016447)
HIX0016447
HIT000537095 (
ENST00000439161
)
(VHS domain containing protein.)
genome : 38,004,942 - 38,016,339 (11,398)
query : 1 - 568 (568/568)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, extr 4, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016447)
HIX0016447
HIT000547878 (
ENST00000449944
)
(VHS domain containing protein.)
genome : 38,004,955 - 38,019,475 (14,521)
query : 1 - 915 (915/927)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.987
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 11, nucl 9.5, mito 6, pero 3,
E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016447)
HIX0016447
HIT000509435 (
ENST00000411501
)
(VHS domain containing protein.)
genome : 38,004,967 - 38,016,282 (11,316)
query : 1 - 661 (661/661)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 5, nucl 2, mito 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016447)
HIX0016447
HIT000551142 (
ENST00000453208
)
(VHS domain containing protein.)
genome : 38,004,984 - 38,016,369 (11,386)
query : 1 - 636 (636/639)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 11, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016447)
HIX0016447
HIT000545449 (
ENST00000447515
)
(VHS domain containing protein.)
genome : 38,005,047 - 38,014,553 (9,507)
query : 1 - 577 (577/577)
4 exons
identity = 0.995
5'(0.991;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 8, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016447)
HIX0016447
HIT000529679 (
ENST00000431745
)
(VHS domain containing protein.)
genome : 38,005,067 - 38,014,522 (9,456)
query : 1 - 483 (483/483)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 4, nucl 2, mito 2, cyto_pero 2,
cyto_plas 2, cyto_golg 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016447)
HIX0016447
HIT000588634 (
ENST00000484804
)
(Hypothetical protein.)
genome : 38,005,073 - 38,010,281 (5,209)
query : 1 - 449 (449/449)
3 exons
identity = 0.993
5'(0.993;0.985;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 13, cyto 8.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016447)
HIX0016447
HIT000592310 (
ENST00000488672
)
(Non-protein coding transcript.)
genome : 38,006,149 - 38,009,201 (3,053)
query : 1 - 544 (544/547)
3 exons
identity = 0.998
5'(1.000;1.000;0.987)3'
coverage = 0.995
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016447)
HIX0016447
HIT000124635 (
ENST00000326597
)
(VHS domain containing protein.)
genome : 38,008,543 - 38,016,274 (7,732)
query : 1 - 946 (946/946)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 5, nucl 2, mito 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016447)
HIX0016447
HIT000511185 (
ENST00000413251
)
(VHS domain containing protein.)
genome : 38,009,977 - 38,016,923 (6,947)
query : 1 - 551 (551/565)
6 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;0.990)3'
coverage = 0.975
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, cyto 10, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016447)
HIX0016447
HIT000520958 (
ENST00000423024
)
(VHS domain containing protein.)
genome : 38,010,140 - 38,016,923 (6,784)
query : 1 - 545 (545/559)
5 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.990)3'
coverage = 0.975
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, cyto 10, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016447)
HIX0016447
HIT000594822 (
ENST00000491295
)
(Conserved hypothetical protein.)
genome : 38,014,410 - 38,016,256 (1,847)
query : 1 - 594 (594/594)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 8, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016447)
HIX0016447
HIT000020282
(
AK095427
)
(ADP-ribosylation factor-binding protein GGA1; Gamma-adaptin-related protein 1; Golgi-localized, gamma ear-containing, ARF-binding protein 1;)
genome : 38,016,855 - 38,029,570 (12,716)
query : 1 - 2,049 (2,049/2,049)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004152 : GAT domain
IPR008152 : Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain
IPR008153 : Clathrin adaptor, gamma-adaptin, appendage
IPR013041 : Coatomer/clathrin adaptor appendage, Ig-like subdomain
GO :
0005622 : Cellular Component : intracellular
0006886 : Biological Process : intracellular protein transport
0016192 : Biological Process : vesicle-mediated transport
0030131 : Cellular Component : clathrin adaptor complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 15, cyto 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016447)
HIX0016447
HIT000585581 (
ENST00000481613
)
(GAT domain containing protein.)
genome : 38,016,861 - 38,019,923 (3,063)
query : 1 - 647 (647/647)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 16.5, nucl 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016447)
HIX0016447
HIT000022125
(
AK097270
)
(ADP-ribosylation factor-binding protein GGA1; Gamma-adaptin-related protein 1; Golgi-localized, gamma ear-containing, ARF-binding protein 1;)
genome : 38,019,836 - 38,023,169 (3,334)
query : 1 - 2,611 (2,611/2,611)
2 exons
identity = 0.994
5'(0.995;0.993)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016447)
HIX0016447
HIT000579685 (
ENST00000475445
)
(Conserved hypothetical protein.)
genome : 38,019,836 - 38,023,169 (3,334)
query : 1 - 2,614 (2,614/2,614)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016447)
HIX0016447
HIT000085839
(
BC000538
)
(ADP-ribosylation factor-binding protein GGA1; Gamma-adaptin-related protein 1; Golgi-localized, gamma ear-containing, ARF-binding protein 1;)
genome : 38,020,974 - 38,029,571 (8,598)
query : 11 - 1,953 (1,943/2,000)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.995;1.000;1.000;
1.000)3'
coverage = 0.995
InterPro :
IPR008152 : Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain
IPR008153 : Clathrin adaptor, gamma-adaptin, appendage
IPR013041 : Coatomer/clathrin adaptor appendage, Ig-like subdomain
GO :
0006886 : Biological Process : intracellular protein transport
0016192 : Biological Process : vesicle-mediated transport
0030131 : Cellular Component : clathrin adaptor complex
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15, cyto 6.5, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016447)
HIX0016447
HIT000568457 (
ENST00000463672
)
(Conserved hypothetical protein.)
genome : 38,025,469 - 38,026,306 (838)
query : 1 - 367 (367/367)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 14, cyto 11, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016447)
HIX0016447
HIT000565868 (
ENST00000460957
)
(Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain containing protein.)
genome : 38,026,675 - 38,028,684 (2,010)
query : 1 - 790 (790/790)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 10, mito 9, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016447)
HIX0016449
HIT000044243
(
AK124370
)
(SH3 domain-binding protein 1.)
genome : 38,030,661 - 38,052,049 (21,389)
query : 1 - 2,858 (2,858/2,858)
20 exons
identity = 0.998
5'(1.000;0.997;1.000;0.990;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.979;1.000;0.991)3'
coverage = 1.000
InterPro :
IPR000198 : Rho GTPase-activating protein domain
IPR004148 : BAR domain
IPR008936 : Rho GTPase activation protein
IPR027267 : Arfaptin homology (AH) domain/BAR domain
GO :
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0005737 : Cellular Component : cytoplasm
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, nucl 9, cyto_pero 9, cyto_plas 9,
cyto_golg 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016449)
HIX0016449
HIT000515470 (
ENST00000417536
)
(BAR domain containing protein.)
genome : 38,030,661 - 38,052,049 (21,389)
query : 1 - 2,858 (2,858/2,858)
20 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016449)
HIX0016449
HIT000311282 (
ENST00000357436
)
(BAR domain containing protein.)
genome : 38,035,482 - 38,052,124 (16,643)
query : 1 - 2,852 (2,852/2,852)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016449)
HIX0016449
HIT000008245
(
AK024971
)
(BAR domain containing protein.)
genome : 38,035,691 - 38,052,042 (16,352)
query : 205 - 2,111 (1,907/2,127)
18 exons
identity = 0.997
5'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.993;1.000;1.000;1.000;1.000;
0.990;0.989;1.000;1.000)3'
coverage = 0.912
InterPro :
IPR000198 : Rho GTPase-activating protein domain
IPR004148 : BAR domain
IPR008936 : Rho GTPase activation protein
IPR027267 : Arfaptin homology (AH) domain/BAR domain
GO :
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0005737 : Cellular Component : cytoplasm
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 2, mito 2, cyto_mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016449)
HIX0016449
HIT000207496 (
NM_018957
)
(BAR domain containing protein.)
genome : 38,035,684 - 38,052,050 (16,367)
query : 1 - 2,576 (2,576/2,592)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016449)
HIX0016449
HIT000130207 (
ENST00000336738
)
(BAR domain containing protein.)
genome : 38,035,684 - 38,046,135 (10,452)
query : 1 - 1,470 (1,470/1,470)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016449)
HIX0016449
HIT000495787
(
AK301163
)
(BAR domain containing protein.)
genome : 38,035,702 - 38,046,621 (10,920)
query : 1 - 1,678 (1,678/1,678)
17 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.993;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000198 : Rho GTPase-activating protein domain
IPR004148 : BAR domain
IPR008936 : Rho GTPase activation protein
IPR027267 : Arfaptin homology (AH) domain/BAR domain
GO :
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0005737 : Cellular Component : cytoplasm
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016449)
HIX0016449
HIT000540399 (
ENST00000442465
)
(BAR domain containing protein.)
genome : 38,035,702 - 38,046,621 (10,920)
query : 1 - 1,678 (1,678/1,678)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016449)
HIX0016449
HIT000267510
(
CR456576
)
Representative transcript
(BAR domain containing protein.)
genome : 38,035,765 - 38,051,862 (16,098)
query : 1 - 2,307 (2,307/2,307)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR000198 : Rho GTPase-activating protein domain
IPR004148 : BAR domain
IPR008936 : Rho GTPase activation protein
IPR027267 : Arfaptin homology (AH) domain/BAR domain
GO :
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0005737 : Cellular Component : cytoplasm
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016449)
HIX0016449
HIT000046429
(
AK126556
)
(SH3 domain-binding protein 1; 3BP-1;)
genome : 38,036,393 - 38,052,049 (15,657)
query : 4 - 2,616 (2,613/2,616)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.991)3'
coverage = 0.999
InterPro :
IPR000198 : Rho GTPase-activating protein domain
IPR004148 : BAR domain
IPR008936 : Rho GTPase activation protein
IPR027267 : Arfaptin homology (AH) domain/BAR domain
GO :
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0005737 : Cellular Component : cytoplasm
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15.5, cyto_mito 11.3333, nucl 7.5,
cyto_nucl 7.33333, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016449)
HIX0016449
HIT000574444 (
ENST00000469947
)
(BAR domain containing protein.)
genome : 38,036,393 - 38,052,048 (15,656)
query : 1 - 2,612 (2,612/2,612)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15.5, cyto_mito 11.3333, nucl 7.5,
cyto_nucl 7.33333, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016449)
HIX0016449
HIT000033695
(
BC008282
)
(SH3 domain-binding protein 1.)
genome : 38,037,378 - 38,052,042 (14,665)
query : 4 - 2,361 (2,358/2,434)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.999
InterPro :
IPR000198 : Rho GTPase-activating protein domain
IPR004148 : BAR domain
IPR008936 : Rho GTPase activation protein
IPR027267 : Arfaptin homology (AH) domain/BAR domain
GO :
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0005737 : Cellular Component : cytoplasm
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 19, nucl 18.5, cyto 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016449)
HIX0016449
HIT000598546 (
ENST00000495174
)
(BAR domain containing protein.)
genome : 38,037,389 - 38,042,941 (5,553)
query : 1 - 927 (927/947)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.979
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 17, cyto 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016449)
HIX0016448
HIT000022645
(
AK097791
)
Representative transcript
(SH3 domain-binding protein 1.)
genome : 38,037,839 - 38,054,384 (16,546)
query : 1 - 1,945 (1,945/1,945)
6 exons
identity = 0.997
3'(0.997;1.000;1.000;1.000;1.000;0.984)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, nucl 12.5, cyto_nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016448)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : ENSMMUT00000005462
Pongo
sp. (Orangutan) : ENSPPYT00000013698
Pan
sp. (Chimpanzee) : ENSPTRT00000026802
HIX0016448
HIT000554033 (
ENST00000456099
)
(SH3 domain-binding protein 1.)
genome : 38,037,839 - 38,054,384 (16,546)
query : 1 - 1,945 (1,945/1,945)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 13.5, mito 6, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016448)
HIX0016449
HIT000331785
(
AY364241
)
(SH3 domain-binding protein 1.)
genome : 38,038,545 - 38,051,691 (13,147)
query : 15 - 1,899 (1,885/1,899)
15 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.982;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.993
InterPro :
IPR000198 : Rho GTPase-activating protein domain
IPR004148 : BAR domain
IPR008936 : Rho GTPase activation protein
IPR027267 : Arfaptin homology (AH) domain/BAR domain
GO :
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0005737 : Cellular Component : cytoplasm
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 11.5, mito 6, cyto 5, extr 3,
E.R._mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016449)
HIX0016449
HIT000576064 (
ENST00000471650
)
(BAR domain containing protein.)
genome : 38,039,462 - 38,043,513 (4,052)
query : 1 - 900 (900/900)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 11.5, nucl 8, mito 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016449)
HIX0016449
HIT000564608 (
ENST00000459646
)
(BAR domain containing protein.)
genome : 38,039,721 - 38,041,062 (1,342)
query : 1 - 330 (330/330)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 11.5, extr 9, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016449)
HIX0016449
HIT000570767 (
ENST00000466097
)
(Rho GTPase-activating protein domain containing protein.)
genome : 38,042,775 - 38,046,785 (4,011)
query : 1 - 777 (777/777)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016449)
HIX0016449
HIT000026114
(
AL157480
)
(Rho GTPase-activating protein domain containing protein.)
genome : 38,043,314 - 38,052,042 (8,729)
query : 12 - 1,392 (1,381/1,444)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.992
InterPro :
IPR000198 : Rho GTPase-activating protein domain
IPR008936 : Rho GTPase activation protein
GO :
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 17.5, cyto 8, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016449)
HIX0227137
HIT000102951 (
ENST00000215904
)
(HAD-superfamily hydrolase, subfamily IIA protein.)
genome : 38,054,734 - 38,062,941 (8,208)
query : 1 - 2,010 (2,010/2,010)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 9.5, cyto_nucl 9.5, nucl 8.5, mito 8, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227137)
HIX0227137
HIT000207846 (
NM_020315
)
(HAD-superfamily hydrolase, subfamily IIA protein.)
genome : 38,054,737 - 38,062,939 (8,203)
query : 1 - 2,005 (2,005/2,072)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.3
,
EC 3.1.3.74
KEGG pathway :
00260 : Glycine, serine and threonine metabolism (58)
00680 : Methane metabolism (75)
00750 : Vitamin B6 metabolism (24)
01100 : Metabolic pathways (1346)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 9.5, cyto_nucl 9.5, nucl 8.5, mito 8, extr 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227137)
HIX0227137
HIT000261630
(
BC064922
)
Representative transcript
(Pyridoxal phosphate phosphatase; PLP phosphatase; EC=3.1.3.3; EC=3.1.3.74; Chronophin;)
genome : 38,054,737 - 38,062,939 (8,203)
query : 1 - 2,005 (2,005/2,072)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.3
,
EC 3.1.3.74
KEGG pathway :
00260 : Glycine, serine and threonine metabolism (58)
00680 : Methane metabolism (75)
00750 : Vitamin B6 metabolism (24)
01100 : Metabolic pathways (1346)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR006349 : 2-phosphoglycolate phosphatase, eukaryotic
IPR006357 : HAD-superfamily hydrolase, subfamily IIA
IPR023214 : HAD-like domain
IPR023215 : Nitrophenylphosphatase-like domain
GO :
0008152 : Biological Process : metabolic process
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 9.5, cyto_nucl 9.5, nucl 8.5, mito 8, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227137)
HIX0227137
HIT000029514
(
BC000320
)
(Pyridoxal phosphate phosphatase; PLP phosphatase; EC=3.1.3.3; EC=3.1.3.74; Chronophin;)
genome : 38,054,738 - 38,062,939 (8,202)
query : 1 - 2,004 (2,004/2,044)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.3
,
EC 3.1.3.74
KEGG pathway :
00260 : Glycine, serine and threonine metabolism (58)
00680 : Methane metabolism (75)
00750 : Vitamin B6 metabolism (24)
01100 : Metabolic pathways (1346)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR006349 : 2-phosphoglycolate phosphatase, eukaryotic
IPR006357 : HAD-superfamily hydrolase, subfamily IIA
IPR023214 : HAD-like domain
IPR023215 : Nitrophenylphosphatase-like domain
GO :
0008152 : Biological Process : metabolic process
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 9.5, cyto_nucl 9.5, nucl 8.5, mito 8, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227137)
HIX0227137
HIT000089760
(
BC018844
)
(Pyridoxal phosphate phosphatase; PLP phosphatase; EC=3.1.3.3; EC=3.1.3.74; Chronophin;)
genome : 38,054,769 - 38,062,939 (8,171)
query : 1 - 1,973 (1,973/1,994)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.999
EC number :
EC 3.1.3.3
,
EC 3.1.3.74
KEGG pathway :
00260 : Glycine, serine and threonine metabolism (58)
00680 : Methane metabolism (75)
00750 : Vitamin B6 metabolism (24)
01100 : Metabolic pathways (1346)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR006349 : 2-phosphoglycolate phosphatase, eukaryotic
IPR006357 : HAD-superfamily hydrolase, subfamily IIA
IPR023214 : HAD-like domain
IPR023215 : Nitrophenylphosphatase-like domain
GO :
0008152 : Biological Process : metabolic process
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 9.5, cyto_nucl 9.5, nucl 8.5, mito 8, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227137)
HIX0227137
HIT000250727
(
AY125047
)
(Pyridoxal phosphate phosphatase; PLP phosphatase; EC=3.1.3.3; EC=3.1.3.74; Chronophin;)
genome : 38,054,790 - 38,061,878 (7,089)
query : 1 - 891 (891/891)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.3.3
,
EC 3.1.3.74
KEGG pathway :
00260 : Glycine, serine and threonine metabolism (58)
00680 : Methane metabolism (75)
00750 : Vitamin B6 metabolism (24)
01100 : Metabolic pathways (1346)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR006349 : 2-phosphoglycolate phosphatase, eukaryotic
IPR006357 : HAD-superfamily hydrolase, subfamily IIA
IPR023214 : HAD-like domain
IPR023215 : Nitrophenylphosphatase-like domain
GO :
0008152 : Biological Process : metabolic process
0016791 : Molecular Function : phosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 9.5, cyto_nucl 9.5, nucl 8.5, mito 8, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227137)
HIX0227137
HIT000087376
(
BC009756
)
(Pyridoxal phosphate phosphatase.)
genome : 38,055,148 - 38,062,939 (7,792)
query : 1 - 1,594 (1,594/1,635)
2 exons
identity = 0.999
5'(1.000;0.999)3'
coverage = 0.999
EC number :
EC 3.1.3.3
KEGG pathway :
00260 : Glycine, serine and threonine metabolism (58)
00680 : Methane metabolism (75)
01100 : Metabolic pathways (1346)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR023214 : HAD-like domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 4.5, cyto_nucl 4, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227137)
HIX0227137
HIT000013879
(
AK057265
)
(Pyridoxal phosphate phosphatase.)
genome : 38,060,918 - 38,062,939 (2,022)
query : 1 - 1,571 (1,571/1,571)
2 exons
identity = 0.999
5'(1.000;0.999)3'
coverage = 1.000
EC number :
EC 3.1.3.3
KEGG pathway :
00260 : Glycine, serine and threonine metabolism (58)
00680 : Methane metabolism (75)
01100 : Metabolic pathways (1346)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR023214 : HAD-like domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 4.5, cyto_nucl 4, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227137)
HIX0227137
HIT000504415 (
ENST00000403251
)
(HAD-like domain containing protein.)
genome : 38,060,918 - 38,062,939 (2,022)
query : 1 - 1,571 (1,571/1,571)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 4.5, cyto_nucl 4, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227137)
HIX0227137
HIT000087948
(
BC012832
)
(HAD-like domain containing protein.)
genome : 38,061,585 - 38,062,939 (1,355)
query : 1 - 1,355 (1,355/1,373)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.999
InterPro :
IPR023214 : HAD-like domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 4.5, cyto_nucl 4, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227137)
HIX0203173
HIT000199219 (
NM_002305
)
(Galectin-1; Gal-1; 14 kDa laminin-binding protein; HLBP14; 14 kDa lectin; Beta-galactoside-binding lectin L-14-I; Galaptin; HBL; HPL; Lactose-binding lectin 1; Lectin galactoside-binding soluble 1; Putative MAPK-activating protein PM12; S-Lac lectin 1;)
genome : 38,071,613 - 38,075,808 (4,196)
query : 1 - 557 (557/586)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 8.5, cyto_nucl 7, nucl 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203173)
HIX0203173
HIT000267445
(
CR456511
)
Representative transcript
(Galectin-1; Gal-1; 14 kDa laminin-binding protein; HLBP14; 14 kDa lectin; Beta-galactoside-binding lectin L-14-I; Galaptin; HBL; HPL; Lactose-binding lectin 1; Lectin galactoside-binding soluble 1; Putative MAPK-activating protein PM12; S-Lac lectin 1;)
genome : 38,071,613 - 38,075,790 (4,178)
query : 1 - 539 (539/539)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001079 : Galectin, carbohydrate recognition domain
IPR013320 : Concanavalin A-like lectin/glucanase domain
IPR015535 : Galectin-1
GO :
0016936 : Molecular Function : galactoside binding
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 8.5, cyto_nucl 7, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203173)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK004298
Rattus
sp. (Rat) : BC058476
Gallus
sp. (Chicken) : BX933184
Tetraodon
sp. (Tetraodon) : CR668263
Bos
sp. (Cow) : ENSBTAT00000020080
Equus
sp. (Horse) : ENSECAT00000007033
Gallus
sp. (Chicken) : M11674
Takifugu
sp. (Fugu) : SINFRUT00000164719
Pan
sp. (Chimpanzee) : XM_001162104
Monodelphis
sp. (Opossum) : XM_001376552
Canis
sp. (Dog) : XM_847738
Macaca
sp. (Macaque) : XR_010795
HIX0203173
HIT000102953 (
ENST00000215909
)
(Galectin-1; Gal-1; 14 kDa laminin-binding protein; HLBP14; 14 kDa lectin; Beta-galactoside-binding lectin L-14-I; Galaptin; HBL; HPL; Lactose-binding lectin 1; Lectin galactoside-binding soluble 1; Putative MAPK-activating protein PM12; S-Lac lectin 1;)
genome : 38,071,615 - 38,075,813 (4,199)
query : 1 - 560 (560/560)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 8.5, cyto_nucl 7, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203173)
HIX0203173
HIT000557656
(
EU363770
)
(Galectin-1; Gal-1; 14 kDa laminin-binding protein; HLBP14; 14 kDa lectin; Beta-galactoside-binding lectin L-14-I; Galaptin; HBL; HPL; Lactose-binding lectin 1; Lectin galactoside-binding soluble 1; Putative MAPK-activating protein PM12; S-Lac lectin 1;)
genome : 38,071,642 - 38,075,796 (4,155)
query : 2 - 517 (516/518)
4 exons
identity = 0.998
5'(1.000;1.000;1.000;0.995)3'
coverage = 0.996
InterPro :
IPR001079 : Galectin, carbohydrate recognition domain
IPR013320 : Concanavalin A-like lectin/glucanase domain
IPR015535 : Galectin-1
GO :
0016936 : Molecular Function : galactoside binding
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 8.5, cyto_nucl 7, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203173)
HIX0203173
HIT000038889
(
BC020675
)
(Galectin-1; Gal-1; 14 kDa laminin-binding protein; HLBP14; 14 kDa lectin; Beta-galactoside-binding lectin L-14-I; Galaptin; HBL; HPL; Lactose-binding lectin 1; Lectin galactoside-binding soluble 1; Putative MAPK-activating protein PM12; S-Lac lectin 1;)
genome : 38,071,643 - 38,075,808 (4,166)
query : 1 - 527 (527/556)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001079 : Galectin, carbohydrate recognition domain
IPR013320 : Concanavalin A-like lectin/glucanase domain
IPR015535 : Galectin-1
GO :
0016936 : Molecular Function : galactoside binding
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 8.5, cyto_nucl 7, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203173)
HIX0203173
HIT000027029
(
AL832117
)
(Galectin-1; Gal-1; 14 kDa laminin-binding protein; HLBP14; 14 kDa lectin; Beta-galactoside-binding lectin L-14-I; Galaptin; HBL; HPL; Lactose-binding lectin 1; Lectin galactoside-binding soluble 1; Putative MAPK-activating protein PM12; S-Lac lectin 1;)
genome : 38,071,644 - 38,075,808 (4,165)
query : 2 - 473 (472/487)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.998
InterPro :
IPR001079 : Galectin, carbohydrate recognition domain
IPR013320 : Concanavalin A-like lectin/glucanase domain
IPR015535 : Galectin-1
GO :
0016936 : Molecular Function : galactoside binding
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 8.5, cyto_nucl 5.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203173)
HIX0203173
HIT000431027
(
AK312161
)
(Galectin-1; Gal-1; 14 kDa laminin-binding protein; HLBP14; 14 kDa lectin; Beta-galactoside-binding lectin L-14-I; Galaptin; HBL; HPL; Lactose-binding lectin 1; Lectin galactoside-binding soluble 1; Putative MAPK-activating protein PM12; S-Lac lectin 1;)
genome : 38,071,643 - 38,075,756 (4,114)
query : 1 - 475 (475/475)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001079 : Galectin, carbohydrate recognition domain
IPR013320 : Concanavalin A-like lectin/glucanase domain
IPR015535 : Galectin-1
GO :
0016936 : Molecular Function : galactoside binding
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 8.5, cyto_nucl 7, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203173)
HIX0203173
HIT000101281
(
D28452
)
(Non-protein coding transcript.)
genome : 38,071,645 - 38,071,715 (71)
query : 1 - 71 (71/71)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203173)
HIX0203173
HIT000568885 (
ENST00000464120
)
(Galectin-1; Gal-1; 14 kDa laminin-binding protein; HLBP14; 14 kDa lectin; Beta-galactoside-binding lectin L-14-I; Galaptin; HBL; HPL; Lactose-binding lectin 1; Lectin galactoside-binding soluble 1; Putative MAPK-activating protein PM12; S-Lac lectin 1;)
genome : 38,071,659 - 38,073,235 (1,577)
query : 1 - 303 (303/303)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 4.5, mito 3, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203173)
HIX0203173
HIT000030582
(
BC001693
)
(Galectin-1; Gal-1; 14 kDa laminin-binding protein; HLBP14; 14 kDa lectin; Beta-galactoside-binding lectin L-14-I; Galaptin; HBL; HPL; Lactose-binding lectin 1; Lectin galactoside-binding soluble 1; Putative MAPK-activating protein PM12; S-Lac lectin 1;)
genome : 38,071,660 - 38,075,808 (4,149)
query : 1 - 510 (510/543)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001079 : Galectin, carbohydrate recognition domain
IPR013320 : Concanavalin A-like lectin/glucanase domain
IPR015535 : Galectin-1
GO :
0016936 : Molecular Function : galactoside binding
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 8.5, cyto_nucl 7, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203173)
HIX0203173
HIT000191263
(
J04456
)
(Galectin-1; Gal-1; 14 kDa laminin-binding protein; HLBP14; 14 kDa lectin; Beta-galactoside-binding lectin L-14-I; Galaptin; HBL; HPL; Lactose-binding lectin 1; Lectin galactoside-binding soluble 1; Putative MAPK-activating protein PM12; S-Lac lectin 1;)
genome : 38,071,661 - 38,075,807 (4,147)
query : 1 - 507 (507/507)
4 exons
identity = 0.998
5'(1.000;1.000;1.000;0.995)3'
coverage = 1.000
InterPro :
IPR001079 : Galectin, carbohydrate recognition domain
IPR013320 : Concanavalin A-like lectin/glucanase domain
IPR015535 : Galectin-1
GO :
0016936 : Molecular Function : galactoside binding
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 8.5, cyto_nucl 7, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203173)
HIX0203173
HIT000242173
(
AB097036
)
(Galectin-1; Gal-1; 14 kDa laminin-binding protein; HLBP14; 14 kDa lectin; Beta-galactoside-binding lectin L-14-I; Galaptin; HBL; HPL; Lactose-binding lectin 1; Lectin galactoside-binding soluble 1; Putative MAPK-activating protein PM12; S-Lac lectin 1;)
genome : 38,071,661 - 38,075,807 (4,147)
query : 1 - 507 (507/507)
4 exons
identity = 0.998
5'(1.000;1.000;1.000;0.995)3'
coverage = 1.000
InterPro :
IPR001079 : Galectin, carbohydrate recognition domain
IPR013320 : Concanavalin A-like lectin/glucanase domain
IPR015535 : Galectin-1
GO :
0016936 : Molecular Function : galactoside binding
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 8.5, cyto_nucl 7, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203173)
HIX0203173
HIT000321495
(
X15256
)
(Galectin-1; Gal-1; 14 kDa laminin-binding protein; HLBP14; 14 kDa lectin; Beta-galactoside-binding lectin L-14-I; Galaptin; HBL; HPL; Lactose-binding lectin 1; Lectin galactoside-binding soluble 1; Putative MAPK-activating protein PM12; S-Lac lectin 1;)
genome : 38,071,664 - 38,075,802 (4,139)
query : 4 - 503 (500/504)
4 exons
identity = 0.998
5'(1.000;1.000;1.000;0.995)3'
coverage = 0.992
InterPro :
IPR001079 : Galectin, carbohydrate recognition domain
IPR013320 : Concanavalin A-like lectin/glucanase domain
IPR015535 : Galectin-1
GO :
0016936 : Molecular Function : galactoside binding
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 8.5, cyto_nucl 7, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203173)
HIX0203173
HIT000523476 (
ENST00000425542
)
(Conserved hypothetical protein.)
genome : 38,071,664 - 38,075,809 (4,146)
query : 1 - 637 (637/637)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 7.5, cyto_nucl 5.83333, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203173)
HIX0203173
HIT000584235 (
ENST00000480207
)
(Galectin-1; Gal-1; 14 kDa lectin; Beta-galactoside-binding lectin L-14-I; Galaptin; Lactose-binding lectin 1; Lectin galactoside-binding soluble 1; OPG-1; S-Lac lectin 1;)
genome : 38,071,689 - 38,073,603 (1,915)
query : 1 - 185 (185/185)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203173)
HIX0203173
HIT000552107 (
ENST00000454173
)
(Conserved hypothetical protein.)
genome : 38,071,695 - 38,075,647 (3,953)
query : 1 - 331 (331/331)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 12.5, extr 10, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203173)
HIX0203173
HIT000592921 (
ENST00000489315
)
(Galectin-1; Gal-1; 14 kDa laminin-binding protein; HLBP14; 14 kDa lectin; Beta-galactoside-binding lectin L-14-I; Galaptin; HBL; HPL; Lactose-binding lectin 1; Lectin galactoside-binding soluble 1; Putative MAPK-activating protein PM12; S-Lac lectin 1;)
genome : 38,072,132 - 38,075,809 (3,678)
query : 1 - 516 (516/516)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 13, cyto 5.5, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203173)
HIX0203173
HIT000321466
(
X14829
)
(Galectin-1; Gal-1; 14 kDa laminin-binding protein; HLBP14; 14 kDa lectin; Beta-galactoside-binding lectin L-14-I; Galaptin; HBL; HPL; Lactose-binding lectin 1; Lectin galactoside-binding soluble 1; Putative MAPK-activating protein PM12; S-Lac lectin 1;)
genome : 38,072,993 - 38,075,813 (2,821)
query : 17 - 472 (456/472)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.966
InterPro :
IPR001079 : Galectin, carbohydrate recognition domain
IPR013320 : Concanavalin A-like lectin/glucanase domain
IPR015535 : Galectin-1
GO :
0016936 : Molecular Function : galactoside binding
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 8.5, cyto_nucl 7, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203173)
HIX0203173
HIT000099695
(
BT006775
)
(Galectin-1; Gal-1; 14 kDa laminin-binding protein; HLBP14; 14 kDa lectin; Beta-galactoside-binding lectin L-14-I; Galaptin; HBL; HPL; Lactose-binding lectin 1; Lectin galactoside-binding soluble 1; Putative MAPK-activating protein PM12; S-Lac lectin 1;)
genome : 38,072,993 - 38,075,754 (2,762)
query : 10 - 406 (397/408)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.973
InterPro :
IPR001079 : Galectin, carbohydrate recognition domain
IPR013320 : Concanavalin A-like lectin/glucanase domain
IPR015535 : Galectin-1
GO :
0016936 : Molecular Function : galactoside binding
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 8.5, cyto_nucl 7, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203173)
HIX0203173
HIT000576702 (
ENST00000472321
)
(16 kDa beta-galactoside-binding lectin; C-16; Galectin CG-16;)
genome : 38,073,006 - 38,075,809 (2,804)
query : 1 - 546 (546/546)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_pero 8.5, extr 7, mito 7, pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203173)
HIX0203173
HIT000215618
(
S44881
)
(Non-protein coding transcript.)
genome : 38,075,664 - 38,075,807 (144)
query : 1 - 143 (143/143)
1 exon
identity = 0.986
5'(0.986)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203173)
HIX0227223
HIT000578336 (
ENST00000474032
)
(Nucleolar protein 12 family protein.)
genome : 38,082,350 - 38,084,306 (1,957)
query : 1 - 523 (523/523)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227223)
HIX0227223
HIT000573154 (
ENST00000468597
)
(Nucleolar protein 12 family protein.)
genome : 38,082,353 - 38,086,907 (4,555)
query : 1 - 632 (632/632)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227223)
HIX0227223
HIT000500056
(
AK316443
)
Representative transcript
(Nucleolar protein 12 family protein.)
genome : 38,082,361 - 38,087,251 (4,891)
query : 1 - 968 (968/968)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;0.993;1.000)3'
coverage = 1.000
InterPro :
IPR019186 : Nucleolar protein 12
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227223)
HIX0041259
HIT000016795
(
AK091928
)
Representative transcript
(Conserved hypothetical protein.)
genome : 38,087,266 - 38,089,481 (2,216)
query : 1 - 2,214 (2,214/2,214)
1 exon
identity = 0.983
5'(0.983)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041259)
HIX0016453
HIT000366392 (
NM_001039141
)
(TRIO and F-actin-binding protein; Protein Tara; Trio-associated repeat on actin;)
genome : 38,092,995 - 38,172,563 (79,569)
query : 1 - 10,145 (10,145/10,159)
24 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 18.5, cyto 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016453)
HIX0016453
HIT000505573 (
ENST00000406386
)
(TRIO and F-actin-binding protein; Protein Tara; Trio-associated repeat on actin;)
genome : 38,093,011 - 38,172,563 (79,553)
query : 1 - 10,129 (10,129/10,129)
24 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 18.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016453)
HIX0016453
HIT000021489
(
AK096634
)
(TRIO and F-actin-binding protein; Protein Tara; Trio-associated repeat on actin;)
genome : 38,093,011 - 38,120,713 (27,703)
query : 1 - 2,405 (2,405/2,628)
7 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;0.994;0.998)3'
coverage = 0.915
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 17.5, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016453)
HIX0016453
HIT000137034 (
ENST00000344404
)
(TRIO and F-actin-binding protein; Protein Tara; Trio-associated repeat on actin;)
genome : 38,093,628 - 38,170,055 (76,428)
query : 1 - 7,300 (7,300/7,300)
22 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 15.5, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016453)
HIX0016453
HIT000342505
(
DQ228003
)
(TRIO and F-actin-binding protein; Protein Tara; Trio-associated repeat on actin;)
genome : 38,093,628 - 38,170,055 (76,428)
query : 1 - 7,300 (7,300/7,300)
22 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR001849 : Pleckstrin homology domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 15.5, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016453)
HIX0016453
HIT000342507
(
DQ228005
)
Representative transcript
(TRIO and F-actin-binding protein; Protein Tara; Trio-associated repeat on actin;)
genome : 38,093,628 - 38,170,055 (76,428)
query : 1 - 7,502 (7,502/7,502)
23 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001849 : Pleckstrin homology domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 18.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016453)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : DQ228000
Rattus
sp. (Rat) : EF203432
Canis
sp. (Dog) : ENSCAFT00000002299
Pongo
sp. (Orangutan) : ENSPPYT00000013701
Equus
sp. (Horse) : XM_001916816
Pan
sp. (Chimpanzee) : XM_515120
Macaca
sp. (Macaque) : XR_010846
HIX0016453
HIT000342506
(
DQ228004
)
(TRIO and F-actin-binding protein; Protein Tara; Trio-associated repeat on actin;)
genome : 38,093,628 - 38,122,577 (28,950)
query : 1 - 3,948 (3,948/3,948)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 14.5, cyto 9, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016453)
HIX0016453
HIT000595971 (
ENST00000492485
)
(TRIO and F-actin-binding protein; Protein Tara; Trio-associated repeat on actin;)
genome : 38,093,628 - 38,122,577 (28,950)
query : 1 - 3,948 (3,948/3,948)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 14.5, cyto 9, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016453)
HIX0016453
HIT000001378
(
AB051449
)
(TRIO and F-actin-binding protein; Protein Tara; Trio-associated repeat on actin;)
genome : 38,120,720 - 38,170,130 (49,411)
query : 276 - 5,562 (5,287/5,562)
18 exons
identity = 0.997
5'(0.999;1.000;0.998;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.990;1.000;
1.000;1.000;1.000;0.971)3'
coverage = 0.951
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 17, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016453)
HIX0041276
HIT000087022
(
BC008287
)
Representative transcript
(Conserved hypothetical protein.)
genome : 38,125,303 - 38,347,784 (222,482)
query : 3 - 981 (979/1,050)
2 exons
identity = 0.968
5'(0.828;0.998)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 11.5, cyto_nucl 8.5, mito_nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041276)
HIX0016453
HIT000505926 (
ENST00000407319
)
(TRIO and F-actin-binding protein isoform 2.)
genome : 38,142,235 - 38,156,353 (14,119)
query : 1 - 2,125 (2,125/2,125)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16.5, cyto 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016453)
HIX0016453
HIT000504566 (
ENST00000403663
)
(TRIO and F-actin-binding protein isoform 1.)
genome : 38,142,240 - 38,170,131 (27,892)
query : 1 - 2,308 (2,308/2,324)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 17.5, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016453)
HIX0016453
HIT000203572 (
NM_007032
)
(TRIO and F-actin-binding protein isoform 1.)
genome : 38,142,241 - 38,172,563 (30,323)
query : 1 - 4,739 (4,739/4,753)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 17.5, cyto 8.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016453)
HIX0016453
HIT000212474 (
NM_138632
)
(TRIO and F-actin-binding protein isoform 2.)
genome : 38,142,241 - 38,155,960 (13,720)
query : 1 - 1,726 (1,726/1,743)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16.5, cyto 10.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016453)
HIX0016453
HIT000090532
(
BC022200
)
(TRIO and F-actin-binding protein isoform 2.)
genome : 38,142,247 - 38,155,954 (13,708)
query : 1 - 1,714 (1,714/1,734)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR001849 : Pleckstrin homology domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 16.5, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016453)
HIX0016453
HIT000076099
(
AF281030
)
(TRIO and F-actin-binding protein isoform 2.)
genome : 38,142,257 - 38,170,137 (27,881)
query : 1 - 2,305 (2,305/2,305)
14 exons
identity = 0.993
5'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
0.986;1.000;1.000;0.982;1.000;0.994;0.975)3'
coverage = 1.000
InterPro :
IPR001849 : Pleckstrin homology domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 16.5, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016453)
HIX0016453
HIT000526009 (
ENST00000428075
)
(TRIO and F-actin-binding protein isoform 2.)
genome : 38,142,277 - 38,154,142 (11,866)
query : 1 - 931 (931/931)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 18, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016453)
HIX0016453
HIT000031647
(
BC003618
)
(TRIO and F-actin-binding protein isoform 1.)
genome : 38,142,319 - 38,170,131 (27,813)
query : 1 - 2,231 (2,231/2,248)
14 exons
identity = 0.995
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.990;1.000;1.000;1.000;1.000;0.971)3'
coverage = 1.000
InterPro :
IPR001849 : Pleckstrin homology domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 17.5, cyto 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016453)
HIX0016453
HIT000510985 (
ENST00000413051
)
(TRIO and F-actin-binding protein isoform 2.)
genome : 38,142,329 - 38,153,970 (11,642)
query : 1 - 904 (904/904)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 7, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016453)
HIX0016453
HIT000516273 (
ENST00000418339
)
(TRIO and F-actin-binding protein; Protein Tara; Trio-associated repeat on actin;)
genome : 38,147,004 - 38,153,989 (6,986)
query : 1 - 939 (939/939)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto 9, mito_pero 9, cyto_nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016453)
HIX0016453
HIT000550453 (
ENST00000452519
)
(TRIO and F-actin-binding protein isoform 2.)
genome : 38,147,392 - 38,151,581 (4,190)
query : 1 - 586 (586/586)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, nucl 9, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016453)
HIX0016453
HIT000515791 (
ENST00000417857
)
(TRIO and F-actin-binding protein; Protein Tara; Trio-associated repeat on actin;)
genome : 38,147,405 - 38,154,054 (6,650)
query : 1 - 919 (919/919)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 9, cyto_mito 9, cyto_plas 9,
cyto_golg 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016453)
HIX0016453
HIT000127041 (
ENST00000331103
)
(TRIO and F-actin-binding protein; Protein Tara; Trio-associated repeat on actin;)
genome : 38,150,889 - 38,151,517 (629)
query : 1 - 513 (513/513)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, nucl 8, cyto 4, mito_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016453)
HIX0016453
HIT000086329
(
BC004303
)
(TRIO and F-actin-binding protein isoform 2.)
genome : 38,153,678 - 38,170,131 (16,454)
query : 1 - 1,714 (1,714/1,731)
9 exons
identity = 0.993
5'(1.000;1.000;0.993;0.990;1.000;1.000;1.000;
1.000;0.971)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 14.1667, cyto 7.5, cyto_golg 6,
extr 2, mito 2, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016453)
HIX0016453
HIT000036181
(
BC013278
)
(TRIO and F-actin-binding protein; Protein Tara; Trio-associated repeat on actin;)
genome : 38,153,891 - 38,170,131 (16,241)
query : 1 - 1,486 (1,486/1,503)
9 exons
identity = 0.993
5'(1.000;1.000;1.000;0.990;1.000;1.000;1.000;
1.000;0.971)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 16, cyto 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016453)
HIX0016453
HIT000026623
(
AL713698
)
(TRIO and F-actin-binding protein isoform 2.)
genome : 38,153,966 - 38,170,514 (16,549)
query : 1 - 2,856 (2,856/2,872)
8 exons
identity = 0.994
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.998;
0.978)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 9.5, cyto_mito 7.5, nucl 6, plas 5.5, mito 4.5,
pero 4, extr_plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016453)
HIX0016453
HIT000058422
(
AB015343
)
(TRIO and F-actin-binding protein; Protein Tara; Trio-associated repeat on actin;)
genome : 38,161,686 - 38,169,931 (8,246)
query : 1 - 910 (910/910)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;0.991;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 16.5, nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016453)
HIX0203166
HIT000202019 (
NM_005318
)
(Histone H5 family protein.)
genome : 38,201,114 - 38,203,443 (2,330)
query : 1 - 2,330 (2,330/2,336)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203166)
HIX0203166
HIT000133487 (
ENST00000340857
)
(Histone H5 family protein.)
genome : 38,201,114 - 38,203,442 (2,329)
query : 1 - 2,329 (2,329/2,329)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203166)
HIX0203166
HIT000016239
(
AK091372
)
(Histone H1.0; Histone H1'; Histone H1(0);)
genome : 38,201,236 - 38,203,442 (2,207)
query : 1 - 2,119 (2,119/2,119)
2 exons
identity = 0.991
5'(0.961;0.996)3'
coverage = 1.000
InterPro :
IPR005818 : Linker histone H1/H5, domain H15
IPR005819 : Histone H5
IPR011991 : Winged helix-turn-helix DNA-binding domain
GO :
0000786 : Cellular Component : nucleosome
0003677 : Molecular Function : DNA binding
0005634 : Cellular Component : nucleus
0006334 : Biological Process : nucleosome assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203166)
HIX0203166
HIT000493833
(
AK299209
)
(Histone H1.0; Histone H1'; Histone H1(0);)
genome : 38,201,236 - 38,202,458 (1,223)
query : 1 - 1,159 (1,159/1,159)
2 exons
identity = 0.985
5'(0.958;0.995)3'
coverage = 1.000
InterPro :
IPR005818 : Linker histone H1/H5, domain H15
IPR005819 : Histone H5
IPR011991 : Winged helix-turn-helix DNA-binding domain
GO :
0000786 : Cellular Component : nucleosome
0003677 : Molecular Function : DNA binding
0005634 : Cellular Component : nucleus
0006334 : Biological Process : nucleosome assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 6, extr 3, mito 3, cyto_pero 3,
cyto_plas 3, cyto_golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203166)
HIX0203166
HIT000431449
(
AK312583
)
(Histone H5 family protein.)
genome : 38,201,236 - 38,202,136 (901)
query : 1 - 889 (889/889)
1 exon
identity = 0.987
5'(0.987)3'
coverage = 1.000
InterPro :
IPR005818 : Linker histone H1/H5, domain H15
IPR005819 : Histone H5
IPR011991 : Winged helix-turn-helix DNA-binding domain
GO :
0000786 : Cellular Component : nucleosome
0003677 : Molecular Function : DNA binding
0005634 : Cellular Component : nucleus
0006334 : Biological Process : nucleosome assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203166)
HIX0203166
HIT000040666
(
BC029046
)
(Histone H5 family protein.)
genome : 38,201,265 - 38,203,437 (2,173)
query : 2 - 2,169 (2,168/2,193)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 1.000
InterPro :
IPR005818 : Linker histone H1/H5, domain H15
IPR005819 : Histone H5
IPR011991 : Winged helix-turn-helix DNA-binding domain
GO :
0000786 : Cellular Component : nucleosome
0003677 : Molecular Function : DNA binding
0005634 : Cellular Component : nucleus
0006334 : Biological Process : nucleosome assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203166)
HIX0203166
HIT000029381
(
BC000145
)
Representative transcript
(Histone H5 family protein.)
genome : 38,201,265 - 38,203,437 (2,173)
query : 2 - 2,169 (2,168/2,188)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 1.000
InterPro :
IPR005818 : Linker histone H1/H5, domain H15
IPR005819 : Histone H5
IPR011991 : Winged helix-turn-helix DNA-binding domain
GO :
0000786 : Cellular Component : nucleosome
0003677 : Molecular Function : DNA binding
0005634 : Cellular Component : nucleus
0006334 : Biological Process : nucleosome assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203166)
HIX0203166
HIT000267436
(
CR456502
)
(Histone H5 family protein.)
genome : 38,201,436 - 38,202,226 (791)
query : 1 - 791 (791/791)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR005818 : Linker histone H1/H5, domain H15
IPR005819 : Histone H5
IPR011991 : Winged helix-turn-helix DNA-binding domain
GO :
0000786 : Cellular Component : nucleosome
0003677 : Molecular Function : DNA binding
0005634 : Cellular Component : nucleus
0006334 : Biological Process : nucleosome assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203166)
HIX0203166
HIT000269088
(
CR542220
)
(Histone H5 family protein.)
genome : 38,201,552 - 38,202,136 (585)
query : 1 - 585 (585/585)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR005818 : Linker histone H1/H5, domain H15
IPR005819 : Histone H5
IPR011991 : Winged helix-turn-helix DNA-binding domain
GO :
0000786 : Cellular Component : nucleosome
0003677 : Molecular Function : DNA binding
0005634 : Cellular Component : nucleus
0006334 : Biological Process : nucleosome assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203166)
HIX0203180
HIT000123414 (
ENST00000323205
)
(2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial; AKB ligase; EC=2.3.1.29; Aminoacetone synthase; Glycine acetyltransferase; Precursor;)
genome : 38,203,912 - 38,213,183 (9,272)
query : 1 - 1,656 (1,656/1,656)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.29
KEGG pathway :
00260 : Glycine, serine and threonine metabolism (58)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13.5, cyto_mito 11.3333, cyto_nucl 10.6667,
nucl 10.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203180)
HIX0203180
HIT000654807 (
NM_001171690
)
(2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial; AKB ligase; EC=2.3.1.29; Aminoacetone synthase; Glycine acetyltransferase; Precursor;)
genome : 38,203,912 - 38,213,183 (9,272)
query : 1 - 1,656 (1,656/1,656)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.29
KEGG pathway :
00260 : Glycine, serine and threonine metabolism (58)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13.5, cyto_mito 11.3333, cyto_nucl 10.6667,
nucl 10.5, cyto 7.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203180)
HIX0203180
HIT000204678 (
NM_014291
)
(2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial; AKB ligase; EC=2.3.1.29; Aminoacetone synthase; Glycine acetyltransferase; Precursor;)
genome : 38,203,912 - 38,212,906 (8,995)
query : 1 - 1,504 (1,504/1,504)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.29
KEGG pathway :
00260 : Glycine, serine and threonine metabolism (58)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15.5, cyto_mito 11.5, nucl 10.5,
cyto_nucl 9.83333, cyto 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203180)
HIX0203180
HIT000105902 (
ENST00000248924
)
(2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial; AKB ligase; EC=2.3.1.29; Aminoacetone synthase; Glycine acetyltransferase; Precursor;)
genome : 38,203,919 - 38,212,904 (8,986)
query : 1 - 1,495 (1,495/1,495)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.29
KEGG pathway :
00260 : Glycine, serine and threonine metabolism (58)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15.5, cyto_mito 11.5, nucl 10.5,
cyto_nucl 9.83333, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203180)
HIX0203180
HIT000422890
(
AK290093
)
(2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial; AKB ligase; EC=2.3.1.29; Aminoacetone synthase; Glycine acetyltransferase; Precursor;)
genome : 38,203,919 - 38,212,903 (8,985)
query : 1 - 1,494 (1,494/1,494)
9 exons
identity = 0.998
5'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994)3'
coverage = 1.000
EC number :
EC 2.3.1.29
KEGG pathway :
00260 : Glycine, serine and threonine metabolism (58)
InterPro :
IPR001917 : Aminotransferase, class-II, pyridoxal-phosphate binding site
IPR004839 : Aminotransferase, class I/classII
IPR011282 : 2-amino-3-ketobutyrate coenzyme A ligase
IPR015421 : Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR015422 : Pyridoxal phosphate-dependent transferase, major region, subdomain 2
IPR015424 : Pyridoxal phosphate-dependent transferase
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
0008890 : Molecular Function : glycine C-acetyltransferase activity
0009058 : Biological Process : biosynthetic process
0016740 : Molecular Function : transferase activity
0030170 : Molecular Function : pyridoxal phosphate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13.5, cyto_nucl 11.1667, cyto_mito 11.1667,
nucl 11, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203180)
HIX0203180
HIT000543129 (
ENST00000445195
)
(2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial isoform 1 precursor.)
genome : 38,203,923 - 38,209,307 (5,385)
query : 1 - 583 (583/583)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.29
KEGG pathway :
00260 : Glycine, serine and threonine metabolism (58)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14.5, cyto_mito 11.3333, cyto_nucl 10, nucl 8.5,
cyto 6, cyto_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203180)
HIX0203180
HIT000513305 (
ENST00000415371
)
(2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial; AKB ligase; EC=2.3.1.29; Aminoacetone synthase; Glycine acetyltransferase; Precursor;)
genome : 38,203,930 - 38,209,492 (5,563)
query : 1 - 552 (552/552)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.29
KEGG pathway :
00260 : Glycine, serine and threonine metabolism (58)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto_nucl 7.16667, nucl 6.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203180)
HIX0203180
HIT000582318 (
ENST00000478203
)
(2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial; AKB ligase; EC=2.3.1.29; Aminoacetone synthase; Glycine acetyltransferase; Precursor;)
genome : 38,203,941 - 38,209,083 (5,143)
query : 1 - 551 (551/551)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.29
KEGG pathway :
00260 : Glycine, serine and threonine metabolism (58)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto_nucl 10.1667, nucl 8, cyto 6,
E.R._mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203180)
HIX0203180
HIT000043063
(
AK123190
)
(2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial; AKB ligase; EC=2.3.1.29; Aminoacetone synthase; Glycine acetyltransferase; Precursor;)
genome : 38,203,945 - 38,213,183 (9,239)
query : 1 - 1,624 (1,624/1,624)
10 exons
identity = 0.999
5'(1.000;0.995;1.000;1.000;0.994;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.29
KEGG pathway :
00260 : Glycine, serine and threonine metabolism (58)
InterPro :
IPR001917 : Aminotransferase, class-II, pyridoxal-phosphate binding site
IPR004839 : Aminotransferase, class I/classII
IPR011282 : 2-amino-3-ketobutyrate coenzyme A ligase
IPR015421 : Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR015422 : Pyridoxal phosphate-dependent transferase, major region, subdomain 2
IPR015424 : Pyridoxal phosphate-dependent transferase
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
0008890 : Molecular Function : glycine C-acetyltransferase activity
0009058 : Biological Process : biosynthetic process
0016740 : Molecular Function : transferase activity
0030170 : Molecular Function : pyridoxal phosphate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12.5, cyto_nucl 11.5, nucl 11, cyto_mito 11,
cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203180)
HIX0203180
HIT000524792 (
ENST00000426858
)
(2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial; AKB ligase; EC=2.3.1.29; Aminoacetone synthase; Glycine acetyltransferase; Precursor;)
genome : 38,203,945 - 38,211,215 (7,271)
query : 1 - 558 (558/558)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.3.1.29
KEGG pathway :
00260 : Glycine, serine and threonine metabolism (58)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto_nucl 7.16667, nucl 6.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203180)
HIX0203180
HIT000036713
(
BC014457
)
(2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial; AKB ligase; EC=2.3.1.29; Aminoacetone synthase; Glycine acetyltransferase; Precursor;)
genome : 38,203,955 - 38,212,906 (8,952)
query : 1 - 1,461 (1,461/1,482)
9 exons
identity = 0.997
5'(0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.991)3'
coverage = 1.000
EC number :
EC 2.3.1.29
KEGG pathway :
00260 : Glycine, serine and threonine metabolism (58)
InterPro :
IPR001917 : Aminotransferase, class-II, pyridoxal-phosphate binding site
IPR004839 : Aminotransferase, class I/classII
IPR011282 : 2-amino-3-ketobutyrate coenzyme A ligase
IPR015421 : Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR015422 : Pyridoxal phosphate-dependent transferase, major region, subdomain 2
IPR015424 : Pyridoxal phosphate-dependent transferase
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
0008890 : Molecular Function : glycine C-acetyltransferase activity
0009058 : Biological Process : biosynthetic process
0016740 : Molecular Function : transferase activity
0030170 : Molecular Function : pyridoxal phosphate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14.5, cyto_mito 11.3333, nucl 11,
cyto_nucl 10.8333, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203180)
HIX0203180
HIT000066229
(
AF077740
)
Representative transcript
(2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial; AKB ligase; EC=2.3.1.29; Aminoacetone synthase; Glycine acetyltransferase; Precursor;)
genome : 38,203,972 - 38,212,904 (8,933)
query : 1 - 1,442 (1,442/1,453)
9 exons
identity = 0.993
5'(1.000;0.962;1.000;1.000;0.987;1.000;0.994;
0.992;0.997)3'
coverage = 1.000
EC number :
EC 2.3.1.29
KEGG pathway :
00260 : Glycine, serine and threonine metabolism (58)
InterPro :
IPR001917 : Aminotransferase, class-II, pyridoxal-phosphate binding site
IPR004839 : Aminotransferase, class I/classII
IPR011282 : 2-amino-3-ketobutyrate coenzyme A ligase
IPR015421 : Pyridoxal phosphate-dependent transferase, major region, subdomain 1
IPR015422 : Pyridoxal phosphate-dependent transferase, major region, subdomain 2
IPR015424 : Pyridoxal phosphate-dependent transferase
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
0008890 : Molecular Function : glycine C-acetyltransferase activity
0009058 : Biological Process : biosynthetic process
0016740 : Molecular Function : transferase activity
0030170 : Molecular Function : pyridoxal phosphate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15.5, cyto_mito 11.5, nucl 10.5,
cyto_nucl 9.83333, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203180)
Ortholog candidate ( ->
Evola
)
Macaca