bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0175776
HIT000546535 (
ENST00000448601
)
(Hypothetical short protein.)
genome : 22,509,975 - 22,510,335 (361)
query : 1 - 281 (281/281)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
This sequence is too short.
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175776)
HIX0175723
HIT000538496 (
ENST00000440562
)
(Conserved hypothetical protein.)
genome : 22,511,775 - 22,512,024 (250)
query : 1 - 250 (250/250)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 6.5, cyto_nucl 6.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175723)
HIX0175379
HIT000324334
(
X87950
)
Representative transcript
(Ig lambda chain V-I region BL2; Precursor;)
genome : 22,516,592 - 22,517,074 (483)
query : 1 - 359 (359/396)
2 exons
identity = 0.972
5'(0.865;0.990)3'
coverage = 0.907
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175379)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : BX929707
Monodelphis
sp. (Opossum) : ENSMODT00000008986
Pan
sp. (Chimpanzee) : ENSPTRT00000048423
Macaca
sp. (Macaque) : XM_001091076
HIX0175379
HIT000396967 (
ENST00000390284
)
(Conserved hypothetical protein.)
genome : 22,516,592 - 22,517,074 (483)
query : 1 - 362 (362/362)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175379)
HIX0175379
HIT000065946
(
AF073699
)
(Ig lambda chain V-I region MEM;)
genome : 22,516,776 - 22,517,071 (296)
query : 1 - 296 (296/327)
1 exon
identity = 0.970
5'(0.970)3'
coverage = 0.905
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, extr 3, cyto_nucl 2, nucl 1.5, cyto 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175379)
HIX0175379
HIT000065952
(
AF073705
)
(Ig lambda chain V-II region BO;)
genome : 22,516,776 - 22,517,073 (298)
query : 1 - 298 (298/325)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 0.917
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, extr 2, cyto 1.5, cyto_nucl 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175379)
HIX0175379
HIT000065953
(
AF073706
)
(Ig lambda chain V-I region MEM;)
genome : 22,516,776 - 22,517,071 (296)
query : 1 - 296 (296/325)
1 exon
identity = 0.970
5'(0.970)3'
coverage = 0.911
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, extr 2, cyto_nucl 2, nucl 1.5, cyto 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175379)
HIX0175379
HIT000065955
(
AF073708
)
(Ig lambda chain V-I region MEM;)
genome : 22,516,776 - 22,517,070 (295)
query : 1 - 295 (295/324)
1 exon
identity = 0.959
5'(0.959)3'
coverage = 0.910
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, cyto 2.5, cyto_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175379)
HIX0175379
HIT000065956
(
AF073709
)
(Ig lambda chain V-I region MEM;)
genome : 22,516,776 - 22,517,071 (296)
query : 1 - 296 (296/324)
1 exon
identity = 0.973
5'(0.973)3'
coverage = 0.914
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, extr 2, cyto_nucl 2, nucl 1.5, cyto 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175379)
HIX0175379
HIT000065948
(
AF073701
)
(Ig lambda chain V-I region MEM;)
genome : 22,516,776 - 22,517,071 (296)
query : 1 - 296 (296/321)
1 exon
identity = 0.973
5'(0.973)3'
coverage = 0.922
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, extr 2, cyto_nucl 2, nucl 1.5, cyto 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175379)
HIX0175379
HIT000065949
(
AF073702
)
(Ig lambda chain V-I region MEM;)
genome : 22,516,776 - 22,517,071 (296)
query : 1 - 296 (296/321)
1 exon
identity = 0.970
5'(0.970)3'
coverage = 0.922
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, extr 2, cyto 1.5, cyto_nucl 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175379)
HIX0175379
HIT000216093
(
S65201
)
(Ig lambda chain V-I region WAH;)
genome : 22,516,842 - 22,517,072 (231)
query : 1 - 231 (231/237)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 0.975
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, cyto 11, nucl 10, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175379)
HIX0175742
HIT000540824 (
ENST00000442890
)
(Conserved hypothetical protein.)
genome : 22,522,682 - 22,523,027 (346)
query : 1 - 346 (346/346)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 7, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175742)
HIX0175835
HIT000556300 (
ENST00000458366
)
(SH2 domain containing protein.)
genome : 22,525,369 - 22,525,942 (574)
query : 1 - 574 (574/574)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13.5, nucl 12.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175835)
HIX0213358
HIT000619559 (
ENST00000520218
)
(Conserved hypothetical protein.)
genome : 22,533,618 - 22,533,867 (250)
query : 1 - 250 (250/250)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10, extr 9, nucl 8.5, cyto_nucl 6.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213358)
HIX0213359
HIT000619784 (
ENST00000520445
)
(Conserved hypothetical protein.)
genome : 22,536,972 - 22,537,275 (304)
query : 1 - 304 (304/304)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 10, cyto 8, mito 6, extr_plas 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213359)
HIX0175668
HIT000529164 (
ENST00000431230
)
(Transforming growth factor-beta, C-terminal domain containing protein.)
genome : 22,540,331 - 22,541,009 (679)
query : 1 - 679 (679/679)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 6, mito 4, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175668)
HIX0197173
HIT000050868
(
BC023973
)
(Ig lambda chain V-VI region EB4; Precursor;)
genome : 22,550,176 - 22,550,860 (685)
query : 1 - 560 (560/627)
2 exons
identity = 0.996
5'(1.000;0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000085162
(
AY190823
)
(Ig lambda chain V-VI region EB4; Precursor;)
genome : 22,550,199 - 22,550,674 (476)
query : 1 - 351 (351/387)
2 exons
identity = 0.980
5'(1.000;0.977)3'
coverage = 0.907
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000652721
(
HM996416
)
(Conserved hypothetical protein.)
genome : 22,550,369 - 22,550,673 (305)
query : 4 - 308 (305/317)
1 exon
identity = 0.970
5'(0.970)3'
coverage = 0.962
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.6667, nucl 11.5, extr 11, cyto 8.5,
cyto_pero 6.16667, mito_nucl 6.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000070432_02
(
AF124184
)
(Hypothetical protein.)
genome : 22,550,381 - 23,264,812 (714,432)
query : 1 - 378 (378/378)
3 exons
identity = 0.974
5'(0.969;0.974;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10, cyto_nucl 10, cyto 8, nucl 6, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000065330
(
AF063733
)
(Conserved hypothetical protein.)
genome : 22,550,381 - 22,550,682 (302)
query : 1 - 302 (302/333)
1 exon
identity = 0.950
5'(0.950)3'
coverage = 0.907
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto_nucl 6.16667, nucl 5.5, cyto 3.5,
cyto_pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000247566
(
AJ410919
)
(Conserved hypothetical protein.)
genome : 22,550,381 - 22,550,676 (296)
query : 1 - 296 (296/303)
1 exon
identity = 0.966
5'(0.966)3'
coverage = 0.977
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10.8333, cyto 8, mito 8, cyto_pero 6.83333,
nucl 6.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000469279
(
EF589460
)
(Conserved hypothetical protein.)
genome : 22,550,381 - 22,550,672 (292)
query : 1 - 292 (292/297)
1 exon
identity = 0.969
5'(0.969)3'
coverage = 0.983
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto_nucl 5.66667, cyto_pero 5.33333, cyto 5,
extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000558450
(
FJ172996
)
(Conserved hypothetical protein.)
genome : 22,550,381 - 22,550,672 (292)
query : 1 - 292 (292/294)
1 exon
identity = 0.973
5'(0.973)3'
coverage = 0.993
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, extr 7, cyto_nucl 6.16667, nucl 6,
cyto_pero 4.16667, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000558451
(
FJ172997
)
(Conserved hypothetical protein.)
genome : 22,550,381 - 22,550,674 (294)
query : 1 - 294 (294/294)
1 exon
identity = 0.980
5'(0.980)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, extr 9, cyto_nucl 6.16667, nucl 6,
cyto_pero 4.16667, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000245422
(
AJ241381
)
(Conserved hypothetical protein.)
genome : 22,550,381 - 22,550,635 (255)
query : 1 - 255 (255/255)
1 exon
identity = 0.984
5'(0.984)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto_nucl 5.16667, cyto_pero 5, cyto 4.5,
pero 3, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000564536
(
EF711053
)
(Conserved hypothetical protein.)
genome : 22,550,391 - 22,550,676 (286)
query : 1 - 286 (286/311)
1 exon
identity = 0.955
5'(0.955)3'
coverage = 0.920
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, cyto_nucl 5.66667, cyto 5.5, cyto_pero 5.5,
extr 5, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000564537
(
EF711054
)
(Conserved hypothetical protein.)
genome : 22,550,391 - 22,550,676 (286)
query : 1 - 286 (286/311)
1 exon
identity = 0.969
5'(0.969)3'
coverage = 0.920
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto_nucl 5.16667, cyto_pero 5, cyto 4.5,
extr 3, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0175593
HIT000518702 (
ENST00000420768
)
(Conserved hypothetical protein.)
genome : 22,577,580 - 22,578,959 (1,380)
query : 1 - 1,380 (1,380/1,380)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11, cyto_nucl 11, extr 10, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175593)
HIX0197232
HIT000530557 (
ENST00000432623
)
(Prefoldin family protein.)
genome : 22,583,115 - 22,584,865 (1,751)
query : 1 - 1,242 (1,242/1,242)
2 exons
identity = 0.995
3'(0.998;0.992)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 10, mito_nucl 9.66667, cyto_nucl 8.16667, extr 8,
mito 7, cyto 4, extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0197232)
HIX0016286
HIT000267543
(
CR456609
)
Representative transcript
(Immunoglobulin iota chain; CD179 antigen-like family member A; Protein VPreB1; V(pre)B protein; VpreB protein; AltName: CD_antigen=CD179a; Precursor;)
genome : 22,599,215 - 22,599,791 (577)
query : 1 - 491 (491/491)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016286)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : AF068848
Mus
sp. (Mouse) : ENSMUST00000075371
Pongo
sp. (Orangutan) : ENSPPYT00000013947
Rattus
sp. (Rat) : XM_001062818
Macaca
sp. (Macaque) : XM_001089831
Equus
sp. (Horse) : XM_001502296
Pan
sp. (Chimpanzee) : XM_515010
Canis
sp. (Dog) : XM_852942
HIX0175478
HIT000442572_12
(
DQ576041
)
Representative transcript
(Non-protein coding transcript.)
genome : 22,610,936 - 22,610,966 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175478)
HIX0016287
HIT000019287
(
AK094432
)
Representative transcript
(Hypothetical protein.)
genome : 22,619,114 - 22,621,710 (2,597)
query : 1 - 2,596 (2,596/2,596)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 10, mito 10, extr_plas 10, extr 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016287)
HIX0227327
HIT000667032_02 (
ENST00000553658
)
(Hypothetical protein.)
genome : 22,625,813 - 22,652,295 (26,483)
query : 1 - 572 (572/572)
4 exons
identity = 0.953
3'(1.000;0.922;0.953;0.953)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 6.5, cyto_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227327)
HIX0016288
HIT000019687
(
AK094832
)
Representative transcript
(Conserved hypothetical protein.)
genome : 22,629,047 - 22,630,935 (1,889)
query : 1 - 1,890 (1,890/1,890)
1 exon
identity = 0.988
5'(0.988)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016288)
HIX0227252
HIT000691442_07 (
ENST00000579514
)
(Hypothetical protein.)
genome : 22,642,554 - 22,645,096 (2,543)
query : 1 - 1,928 (1,928/1,928)
2 exons
identity = 0.966
3'(0.954;0.973)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 18, extr 6, plas 4, cyto 2, cysk_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227252)
HIX0227252
HIT000692250_07 (
ENST00000580334
)
(Hypothetical protein.)
genome : 22,642,554 - 22,645,096 (2,543)
query : 1 - 1,928 (1,928/1,928)
2 exons
identity = 0.964
3'(0.954;0.971)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 18, extr 7, plas 3, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227252)
HIX0227252
HIT000695331_07 (
ENST00000583450
)
(Hypothetical protein.)
genome : 22,642,554 - 22,645,096 (2,543)
query : 1 - 1,928 (1,928/1,928)
2 exons
identity = 0.964
3'(0.954;0.971)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 18, extr 7, plas 3, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227252)
HIX0175527
HIT000510083 (
ENST00000412149
)
(Conserved hypothetical protein.)
genome : 22,648,098 - 22,649,159 (1,062)
query : 1 - 524 (524/524)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175527)
HIX0175480
HIT000445426_14
(
DQ578895
)
Representative transcript
(Non-protein coding transcript.)
genome : 22,669,032 - 22,669,062 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175480)
HIX0227131
HIT000320889
(
X01147
)
Representative transcript
(Ig lambda chain V-I region BL2; Precursor;)
genome : 22,676,833 - 22,677,321 (489)
query : 1 - 379 (379/420)
2 exons
identity = 0.974
5'(0.948;0.980)3'
coverage = 0.902
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227131)
HIX0197173
HIT000715482_01
(
JF806285
)
(Ig lambda-2 chain C regions;)
genome : 22,681,709 - 23,248,831 (567,123)
query : 1 - 705 (705/705)
4 exons
identity = 0.969
5'(0.872;0.970;0.825;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000715486_01
(
JF806289
)
(Ig lambda-2 chain C regions;)
genome : 22,681,709 - 23,243,475 (561,767)
query : 1 - 714 (714/714)
4 exons
identity = 0.968
5'(0.872;0.958;0.929;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0227166
HIT000219904
(
U43928
)
Representative transcript
(Immunoglobulin omega chain; Protein VPreB2; Precursor;)
genome : 22,697,576 - 22,698,082 (507)
query : 1 - 370 (370/375)
2 exons
identity = 0.981
5'(0.870;0.997)3'
coverage = 0.987
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227166)
HIX0197173
HIT000660549
(
AB729123
)
(Conserved hypothetical protein.)
genome : 22,712,143 - 22,712,606 (464)
query : 1 - 349 (349/387)
2 exons
identity = 0.951
5'(0.826;0.970)3'
coverage = 0.902
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000342687_03
(
DQ322761
)
(Hypothetical protein.)
genome : 22,712,315 - 23,243,206 (530,892)
query : 7 - 388 (382/390)
3 exons
identity = 0.979
5'(0.986;0.950;0.961)3'
coverage = 0.979
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, cyto 8, E.R._mito 8, cyto_nucl 7.66667,
cyto_pero 5.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000327213
(
Z46312
)
(Conserved hypothetical protein.)
genome : 22,712,342 - 22,712,607 (266)
query : 1 - 266 (266/273)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 0.974
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto_nucl 7.66667, nucl 6, cyto 5,
cyto_pero 4.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0227211
HIT000486966
(
AB363377
)
Representative transcript
(Conserved hypothetical protein.)
genome : 22,724,162 - 22,724,462 (301)
query : 1 - 300 (300/333)
1 exon
identity = 0.983
5'(0.983)3'
coverage = 0.901
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.3333, nucl 11, extr 10, cyto 9.5,
cyto_pero 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227211)
HIX0227169
HIT000394735
(
EF028224
)
Representative transcript
(Conserved hypothetical protein.)
genome : 22,730,563 - 22,730,872 (310)
query : 1 - 310 (310/318)
1 exon
identity = 0.965
5'(0.965)3'
coverage = 0.975
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto_nucl 6.66667, cyto 5.5, cyto_pero 5.5,
nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227169)
HIX0197173
HIT000080648_02
(
AF490938
)
(Hypothetical protein.)
genome : 22,764,149 - 23,247,204 (483,056)
query : 1 - 384 (384/384)
3 exons
identity = 0.959
5'(1.000;0.958;0.927)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000652410
(
HM996105
)
(Conserved hypothetical protein.)
genome : 22,764,305 - 22,764,610 (306)
query : 9 - 313 (305/328)
1 exon
identity = 0.954
5'(0.954)3'
coverage = 0.930
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 9, cyto_nucl 4.33333, cyto 4,
cyto_pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000652750
(
HM996445
)
(Conserved hypothetical protein.)
genome : 22,764,304 - 22,764,609 (306)
query : 8 - 313 (306/314)
1 exon
identity = 0.967
5'(0.967)3'
coverage = 0.975
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10, cyto_nucl 8.66667, nucl 8.5, extr 7,
cyto 5.5, cyto_pero 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000652752
(
HM996447
)
(Conserved hypothetical protein.)
genome : 22,764,314 - 22,764,607 (294)
query : 17 - 309 (293/309)
1 exon
identity = 0.990
5'(0.990)3'
coverage = 0.948
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.5, nucl 11, extr 9, cyto 7.5,
cyto_pero 6.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000652711
(
HM996406
)
(Conserved hypothetical protein.)
genome : 22,764,304 - 22,764,605 (302)
query : 3 - 304 (302/304)
1 exon
identity = 0.950
5'(0.950)3'
coverage = 0.993
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, nucl 7.5, cyto_nucl 7.16667,
mito_pero 7.16667, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000652689
(
HM996384
)
(Conserved hypothetical protein.)
genome : 22,764,304 - 22,764,610 (307)
query : 1 - 307 (307/311)
1 exon
identity = 0.967
5'(0.967)3'
coverage = 0.987
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11, cyto 9, mito 8, nucl 7.5,
cyto_pero 7.16667, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000216460
(
S73120
)
(Conserved hypothetical protein.)
genome : 22,764,316 - 22,764,613 (298)
query : 1 - 298 (298/330)
1 exon
identity = 0.987
5'(0.987)3'
coverage = 0.903
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 11, mito 10, cyto 5.5, extr 5,
E.R._mito 5, mito_pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000247365
(
AJ399869
)
(Conserved hypothetical protein.)
genome : 22,764,316 - 22,764,614 (299)
query : 1 - 300 (300/330)
1 exon
identity = 0.960
5'(0.960)3'
coverage = 0.909
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto_nucl 8.66667, nucl 6.5, cyto 5.5,
extr 5, cyto_pero 4.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000342148
(
DQ187499
)
(Conserved hypothetical protein.)
genome : 22,764,316 - 22,764,614 (299)
query : 1 - 298 (298/320)
1 exon
identity = 0.970
5'(0.970)3'
coverage = 0.931
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, nucl 14, extr 9, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000342152
(
DQ187503
)
(Conserved hypothetical protein.)
genome : 22,764,316 - 22,764,614 (299)
query : 1 - 298 (298/320)
1 exon
identity = 0.973
5'(0.973)3'
coverage = 0.931
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, nucl 14, extr 9, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000217955
(
U09885
)
(Conserved hypothetical protein.)
genome : 22,764,322 - 22,764,612 (291)
query : 7 - 297 (291/297)
1 exon
identity = 0.976
5'(0.976)3'
coverage = 0.980
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 15.3333, cyto 8, extr 7,
cyto_pero 5.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000645969
(
FJ385549
)
(Conserved hypothetical protein.)
genome : 22,764,339 - 22,764,613 (275)
query : 1 - 275 (275/290)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.948
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12, nucl 10.5, extr 8, cyto 8,
cyto_pero 6.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000063749
(
AF043584
)
(Conserved hypothetical protein.)
genome : 22,764,346 - 22,764,606 (261)
query : 1 - 261 (261/282)
1 exon
identity = 0.962
5'(0.962)3'
coverage = 0.926
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.5, mito 9, nucl 8.5, cyto 7.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000063753
(
AF043588
)
(Conserved hypothetical protein.)
genome : 22,764,349 - 22,764,613 (265)
query : 1 - 265 (265/291)
1 exon
identity = 0.977
5'(0.977)3'
coverage = 0.911
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10.6667, mito 9, nucl 8.5, cyto 7.5, extr 6,
cyto_pero 5.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000064501
(
AF052823
)
(Conserved hypothetical protein.)
genome : 22,764,350 - 22,764,612 (263)
query : 1 - 263 (263/290)
1 exon
identity = 0.977
5'(0.977)3'
coverage = 0.907
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 13, cyto 9.5, extr 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0213293
pHIT000036746 ( pHIT000036746 )
Representative transcript
(Conserved hypothetical protein.)
genome : 22,804,540 - 22,804,950 (411)
query : 1 - 324 (324/324)
2 exons
SOSUI :
MEMBRANE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213293)
CAGE tag :
H40BA11C0606
HIX0213297
eHIT000013899 ( ESTsASS_22_537 )
Representative transcript
(Non-protein coding transcript.)
genome : 22,806,926 - 22,811,274 (4,349)
query : 1 - 418 (418/418)
3 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213297)
ESTs used for assembly :
AW024097
HIX0016290
HIT000097197
(
BC042370
)
(Hypothetical short protein.)
genome : 22,838,773 - 22,839,729 (957)
query : 1 - 957 (957/972)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016290)
HIX0016290
HIT000211927 (
NM_080764
)
(Zinc finger protein 280B; 5'OY11.1; Suppressor of hairy wing homolog 2; Zinc finger protein 279; Zinc finger protein 632;)
genome : 22,838,767 - 22,863,505 (24,739)
query : 1 - 5,733 (5,733/5,733)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016290)
HIX0016290
HIT000505588 (
ENST00000406426
)
(Zinc finger protein 280B; 5'OY11.1; Suppressor of hairy wing homolog 2; Zinc finger protein 279; Zinc finger protein 632;)
genome : 22,838,767 - 22,863,472 (24,706)
query : 1 - 4,818 (4,818/4,818)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016290)
HIX0016290
HIT000313799 (
ENST00000360412
)
(Zinc finger protein 280B; 5'OY11.1; Suppressor of hairy wing homolog 2; Zinc finger protein 279; Zinc finger protein 632;)
genome : 22,838,774 - 22,863,505 (24,732)
query : 1 - 5,726 (5,726/5,726)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016290)
HIX0016290
HIT000093855
(
BC035376
)
(Hypothetical short protein.)
genome : 22,839,219 - 22,839,860 (642)
query : 2 - 643 (642/660)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 0.995
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016290)
HIX0016290
HIT000052303
(
BC040020
)
Representative transcript
(Zinc finger protein 280B; 5'OY11.1; Suppressor of hairy wing homolog 2; Zinc finger protein 279; Zinc finger protein 632;)
genome : 22,839,219 - 22,863,051 (23,833)
query : 1 - 3,959 (3,959/3,974)
5 exons
identity = 0.993
3'(0.990;0.994;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR025243 : Domain of unknown function DUF4195
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016290)
HIX0016290
HIT000022462
(
AK097608
)
(Zinc finger protein 280B; 5'OY11.1; Suppressor of hairy wing homolog 2; Zinc finger protein 279; Zinc finger protein 632;)
genome : 22,842,025 - 22,863,505 (21,481)
query : 1 - 2,475 (2,475/2,475)
4 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR025243 : Domain of unknown function DUF4195
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016290)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB168589
Mus
sp. (Mouse) : AK144644
Bos
sp. (Cow) : BC102316
Gallus
sp. (Chicken) : CR352765
Canis
sp. (Dog) : ENSCAFT00000021544
Pongo
sp. (Orangutan) : ENSPPYT00000013481
Pan
sp. (Chimpanzee) : XM_001148170
Equus
sp. (Horse) : XM_001493714
HIX0016290
HIT000267548
(
CR456614
)
(Zinc finger protein 280B; 5'OY11.1; Suppressor of hairy wing homolog 2; Zinc finger protein 279; Zinc finger protein 632;)
genome : 22,842,081 - 22,843,775 (1,695)
query : 1 - 1,695 (1,695/1,695)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
InterPro :
IPR025243 : Domain of unknown function DUF4195
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016290)
HIX0016291
HIT000054021
(
BC053901
)
(Zinc finger protein 280A; 3'OY11.1; Suppressor of hairy wing homolog 1; Zinc finger protein 636;)
genome : 22,868,062 - 22,874,598 (6,537)
query : 1 - 2,132 (2,132/2,201)
2 exons
identity = 0.999
3'(0.999;0.994)5'
coverage = 1.000
InterPro :
IPR025243 : Domain of unknown function DUF4195
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016291)
HIX0016291
HIT000211910 (
NM_080740
)
(Zinc finger protein 280A; 3'OY11.1; Suppressor of hairy wing homolog 1; Zinc finger protein 636;)
genome : 22,868,062 - 22,874,613 (6,552)
query : 1 - 2,146 (2,146/2,180)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016291)
HIX0016291
HIT000116050 (
ENST00000302097
)
(Zinc finger protein 280A; 3'OY11.1; Suppressor of hairy wing homolog 1; Zinc finger protein 636;)
genome : 22,868,060 - 22,874,613 (6,554)
query : 1 - 2,148 (2,148/2,148)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016291)
HIX0016291
HIT000017975
(
AK093108
)
Representative transcript
(Zinc finger protein 280A; 3'OY11.1; Suppressor of hairy wing homolog 1; Zinc finger protein 636;)
genome : 22,868,063 - 22,874,613 (6,551)
query : 6 - 2,150 (2,145/2,150)
2 exons
identity = 0.999
3'(0.999;0.995)5'
coverage = 0.998
InterPro :
IPR025243 : Domain of unknown function DUF4195
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016291)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000013482
Macaca
sp. (Macaque) : XM_001091359
Pan
sp. (Chimpanzee) : XM_525541
Bos
sp. (Cow) : XM_596386
HIX0016292
HIT000052242
(
BC039731
)
(Melanoma antigen preferentially expressed in tumors; Opa-interacting protein 4; OIP-4; Preferentially expressed antigen of melanoma;)
genome : 22,890,127 - 22,901,658 (11,532)
query : 1 - 2,721 (2,721/2,791)
5 exons
identity = 0.996
3'(0.998;1.000;1.000;0.990;1.000)5'
coverage = 1.000
InterPro :
IPR026292 : PRAME family/Leucine-rich repeat-containing protein 14
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14.5, nucl 11.5, cyto_mito 11, cyto_nucl 10.3333,
cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016292)
HIX0016292
HIT000202736 (
NM_006115
)
(Melanoma antigen preferentially expressed in tumors; Opa-interacting protein 4; OIP-4; Preferentially expressed antigen of melanoma;)
genome : 22,890,123 - 22,901,696 (11,574)
query : 1 - 2,145 (2,145/2,162)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, mito 12.5, cyto_nucl 11.3333, cyto_mito 10,
cyto 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016292)
HIX0016292
HIT000320227 (
NM_206953
)
(Melanoma antigen preferentially expressed in tumors; Opa-interacting protein 4; OIP-4; Preferentially expressed antigen of melanoma;)
genome : 22,890,123 - 22,901,696 (11,574)
query : 1 - 2,759 (2,759/2,776)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, mito 12.5, cyto_nucl 11.3333, cyto_mito 10,
cyto 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016292)
HIX0016292
HIT000320228 (
NM_206954
)
(Melanoma antigen preferentially expressed in tumors; Opa-interacting protein 4; OIP-4; Preferentially expressed antigen of melanoma;)
genome : 22,890,123 - 22,901,696 (11,574)
query : 1 - 2,124 (2,124/2,141)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, mito 12.5, cyto_nucl 11.3333, cyto_mito 10,
cyto 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016292)
HIX0016292
HIT000220869
(
U65011
)
Representative transcript
(Melanoma antigen preferentially expressed in tumors; Opa-interacting protein 4; OIP-4; Preferentially expressed antigen of melanoma;)
genome : 22,890,123 - 22,901,682 (11,560)
query : 1 - 2,131 (2,131/2,148)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;0.990)5'
coverage = 1.000
InterPro :
IPR026292 : PRAME family/Leucine-rich repeat-containing protein 14
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, mito 12.5, cyto_nucl 11.3333, cyto_mito 10,
cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016292)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB169256
Mus
sp. (Mouse) : AK019795
Equus
sp. (Horse) : ENSECAT00000019598
Pongo
sp. (Orangutan) : ENSPPYT00000013483
Rattus
sp. (Rat) : XM_001074173
Pan
sp. (Chimpanzee) : XM_001148391
Canis
sp. (Dog) : XM_534747
HIX0016292
HIT000320229 (
NM_206955
)
(Melanoma antigen preferentially expressed in tumors; Opa-interacting protein 4; OIP-4; Preferentially expressed antigen of melanoma;)
genome : 22,890,123 - 22,901,550 (11,428)
query : 1 - 2,203 (2,203/2,220)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;0.994)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, mito 12.5, cyto_nucl 11.3333, cyto_mito 10,
cyto 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016292)
HIX0016292
HIT000062770
(
AF025440
)
(Melanoma antigen preferentially expressed in tumors; Opa-interacting protein 4; OIP-4; Preferentially expressed antigen of melanoma;)
genome : 22,890,123 - 22,890,664 (542)
query : 2 - 543 (542/560)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.998
InterPro :
IPR026292 : PRAME family/Leucine-rich repeat-containing protein 14
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016292)
HIX0016292
HIT000090502
(
BC022008
)
(Melanoma antigen preferentially expressed in tumors; Opa-interacting protein 4; OIP-4; Preferentially expressed antigen of melanoma;)
genome : 22,890,123 - 22,901,768 (11,646)
query : 12 - 2,842 (2,831/2,857)
5 exons
identity = 0.998
3'(0.996;1.000;1.000;0.999;1.000)5'
coverage = 0.996
InterPro :
IPR026292 : PRAME family/Leucine-rich repeat-containing protein 14
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, mito 12.5, cyto_nucl 11.3333, cyto_mito 10,
cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016292)
HIX0016292
HIT000320230 (
NM_206956
)
(Melanoma antigen preferentially expressed in tumors; Opa-interacting protein 4; OIP-4; Preferentially expressed antigen of melanoma;)
genome : 22,890,123 - 22,901,550 (11,428)
query : 1 - 2,182 (2,182/2,197)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;0.994)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, mito 12.5, cyto_nucl 11.3333, cyto_mito 10,
cyto 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016292)
HIX0016292
HIT000036502
(
BC014074
)
(Melanoma antigen preferentially expressed in tumors; Opa-interacting protein 4; OIP-4; Preferentially expressed antigen of melanoma;)
genome : 22,890,127 - 22,901,422 (11,296)
query : 1 - 2,050 (2,050/2,067)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026292 : PRAME family/Leucine-rich repeat-containing protein 14
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, mito 12.5, cyto_nucl 11.3333, cyto_mito 10,
cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016292)
HIX0016292
HIT000596133 (
ENST00000492657
)
(Melanoma antigen preferentially expressed in tumors; Opa-interacting protein 4; OIP-4; Preferentially expressed antigen of melanoma;)
genome : 22,890,123 - 22,901,768 (11,646)
query : 1 - 2,831 (2,831/2,831)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, mito 12.5, cyto_nucl 11.3333, cyto_mito 10,
cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016292)
HIX0016292
HIT000481897 (
ENST00000398743
)
(Melanoma antigen preferentially expressed in tumors; Opa-interacting protein 4; OIP-4; Preferentially expressed antigen of melanoma;)
genome : 22,890,123 - 22,901,747 (11,625)
query : 1 - 2,196 (2,196/2,196)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, mito 12.5, cyto_nucl 11.3333, cyto_mito 10,
cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016292)
HIX0016292
HIT000642229 (
ENST00000543184
)
(Melanoma antigen preferentially expressed in tumors; Opa-interacting protein 4; OIP-4; Preferentially expressed antigen of melanoma;)
genome : 22,890,124 - 22,901,696 (11,573)
query : 1 - 2,758 (2,758/2,758)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, mito 12.5, cyto_nucl 11.3333, cyto_mito 10,
cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016292)
HIX0016292
HIT000481895 (
ENST00000398741
)
(Melanoma antigen preferentially expressed in tumors; Opa-interacting protein 4; OIP-4; Preferentially expressed antigen of melanoma;)
genome : 22,890,124 - 22,901,550 (11,427)
query : 1 - 2,202 (2,202/2,202)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, mito 12.5, cyto_nucl 11.3333, cyto_mito 10,
cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016292)
HIX0016292
HIT000505310 (
ENST00000405655
)
(Melanoma antigen preferentially expressed in tumors; Opa-interacting protein 4; OIP-4; Preferentially expressed antigen of melanoma;)
genome : 22,890,126 - 22,901,550 (11,425)
query : 1 - 2,179 (2,179/2,179)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, mito 12.5, cyto_nucl 11.3333, cyto_mito 10,
cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016292)
HIX0016292
HIT000499217
(
AK304593
)
(Conserved hypothetical protein.)
genome : 22,890,128 - 22,901,575 (11,448)
query : 1 - 2,222 (2,222/2,222)
5 exons
identity = 0.996
3'(1.000;1.000;1.000;0.979;0.990)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 15.5, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016292)
HIX0016292
HIT000049054
(
AK129783
)
(Melanoma antigen preferentially expressed in tumors; Opa-interacting protein 4; OIP-4; Preferentially expressed antigen of melanoma;)
genome : 22,890,128 - 22,900,023 (9,896)
query : 16 - 2,063 (2,048/2,063)
5 exons
identity = 0.999
3'(1.000;1.000;1.000;0.992;0.983)5'
coverage = 0.993
InterPro :
IPR026292 : PRAME family/Leucine-rich repeat-containing protein 14
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14.5, nucl 11.5, cyto_mito 11, cyto_nucl 10.3333,
cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016292)
HIX0016292
HIT000496812
(
AK302188
)
(Melanoma antigen preferentially expressed in tumors; Opa-interacting protein 4; OIP-4; Preferentially expressed antigen of melanoma;)
genome : 22,890,128 - 22,896,603 (6,476)
query : 1 - 2,222 (2,222/2,222)
4 exons
identity = 0.999
3'(1.000;0.998;0.997;0.997)5'
coverage = 1.000
InterPro :
IPR026292 : PRAME family/Leucine-rich repeat-containing protein 14
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 14, cyto 7, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016292)
HIX0016292
HIT000638907 (
ENST00000539862
)
(Melanoma antigen preferentially expressed in tumors; Opa-interacting protein 4; OIP-4; Preferentially expressed antigen of melanoma;)
genome : 22,890,128 - 22,896,603 (6,476)
query : 1 - 2,223 (2,223/2,223)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 14.5, cyto 7, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016292)
HIX0016292
HIT000504219 (
ENST00000402697
)
(Melanoma antigen preferentially expressed in tumors; Opa-interacting protein 4; OIP-4; Preferentially expressed antigen of melanoma;)
genome : 22,890,189 - 22,901,695 (11,507)
query : 1 - 2,057 (2,057/2,057)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, mito 12.5, cyto_nucl 11.3333, cyto_mito 10,
cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016292)
HIX0016292
HIT000500008
(
AK316395
)
(Melanoma antigen preferentially expressed in tumors; Opa-interacting protein 4; OIP-4; Preferentially expressed antigen of melanoma;)
genome : 22,890,323 - 22,898,347 (8,025)
query : 1 - 1,766 (1,766/1,766)
4 exons
identity = 0.998
3'(0.996;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026292 : PRAME family/Leucine-rich repeat-containing protein 14
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, nucl 16.5, cyto 15.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016292)
HIX0016292
HIT000522138 (
ENST00000424204
)
(Melanoma antigen preferentially expressed in tumors; Opa-interacting protein 4; OIP-4; Preferentially expressed antigen of melanoma;)
genome : 22,890,323 - 22,898,347 (8,025)
query : 1 - 1,766 (1,766/1,766)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 14.5, cyto 7, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016292)
HIX0016292
HIT000267483
(
CR456549
)
(Melanoma antigen preferentially expressed in tumors; Opa-interacting protein 4; OIP-4; Preferentially expressed antigen of melanoma;)
genome : 22,890,429 - 22,899,339 (8,911)
query : 1 - 1,677 (1,677/1,677)
4 exons
identity = 0.999
3'(1.000;1.000;1.000;0.991)5'
coverage = 1.000
InterPro :
IPR026292 : PRAME family/Leucine-rich repeat-containing protein 14
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14.5, nucl 11.5, cyto_mito 11, cyto_nucl 10.3333,
cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016292)
HIX0016292
HIT000721401
(
JQ511985
)
(Melanoma antigen preferentially expressed in tumors; Opa-interacting protein 4; OIP-4; Preferentially expressed antigen of melanoma;)
genome : 22,890,442 - 22,899,309 (8,868)
query : 1 - 1,634 (1,634/1,634)
4 exons
identity = 0.999
3'(1.000;1.000;1.000;0.987)5'
coverage = 1.000
InterPro :
IPR026292 : PRAME family/Leucine-rich repeat-containing protein 14
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14.5, nucl 11.5, cyto_mito 11, cyto_nucl 10.3333,
cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016292)
HIX0016292
HIT000721399
(
JQ511983
)
(Melanoma antigen preferentially expressed in tumors; Opa-interacting protein 4; OIP-4; Preferentially expressed antigen of melanoma;)
genome : 22,890,443 - 22,899,309 (8,867)
query : 1 - 1,633 (1,633/1,633)
4 exons
identity = 0.999
3'(1.000;1.000;1.000;0.987)5'
coverage = 1.000
InterPro :
IPR026292 : PRAME family/Leucine-rich repeat-containing protein 14
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14.5, nucl 11.5, cyto_mito 11, cyto_nucl 10.3333,
cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016292)
HIX0016292
HIT000721397
(
JQ511981
)
(Melanoma antigen preferentially expressed in tumors; Opa-interacting protein 4; OIP-4; Preferentially expressed antigen of melanoma;)
genome : 22,890,452 - 22,899,289 (8,838)
query : 1 - 1,604 (1,604/1,604)
4 exons
identity = 0.999
3'(1.000;1.000;0.997;1.000)5'
coverage = 1.000
InterPro :
IPR026292 : PRAME family/Leucine-rich repeat-containing protein 14
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, mito 12.5, cyto_nucl 11.3333, cyto_mito 10,
cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016292)
HIX0016292
HIT000721398
(
JQ511982
)
(Melanoma antigen preferentially expressed in tumors; Opa-interacting protein 4; OIP-4; Preferentially expressed antigen of melanoma;)
genome : 22,890,453 - 22,899,309 (8,857)
query : 1 - 1,623 (1,623/1,623)
4 exons
identity = 0.999
3'(1.000;1.000;1.000;0.987)5'
coverage = 1.000
InterPro :
IPR026292 : PRAME family/Leucine-rich repeat-containing protein 14
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14.5, nucl 11.5, cyto_mito 11, cyto_nucl 10.3333,
cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016292)
HIX0016292
HIT000721400
(
JQ511984
)
(Melanoma antigen preferentially expressed in tumors; Opa-interacting protein 4; OIP-4; Preferentially expressed antigen of melanoma;)
genome : 22,890,454 - 22,899,302 (8,849)
query : 1 - 1,615 (1,615/1,615)
4 exons
identity = 0.999
3'(1.000;1.000;1.000;0.986)5'
coverage = 1.000
InterPro :
IPR026292 : PRAME family/Leucine-rich repeat-containing protein 14
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14.5, nucl 11.5, cyto_mito 11, cyto_nucl 10.3333,
cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016292)
HIX0016292
HIT000431635
(
AK312769
)
(Melanoma antigen preferentially expressed in tumors; Opa-interacting protein 4; OIP-4; Preferentially expressed antigen of melanoma;)
genome : 22,890,489 - 22,900,015 (9,527)
query : 1 - 1,658 (1,658/1,658)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026292 : PRAME family/Leucine-rich repeat-containing protein 14
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, mito 12.5, cyto_nucl 11.3333, cyto_mito 10,
cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016292)
HIX0016292
HIT000537040 (
ENST00000439106
)
(Melanoma antigen preferentially expressed in tumors; Opa-interacting protein 4; OIP-4; Preferentially expressed antigen of melanoma;)
genome : 22,892,496 - 22,901,686 (9,191)
query : 1 - 891 (891/891)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, nucl 9, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016292)
HIX0016292
HIT000536822 (
ENST00000438888
)
(Melanoma antigen preferentially expressed in tumors; Opa-interacting protein 4; OIP-4; Preferentially expressed antigen of melanoma;)
genome : 22,892,605 - 22,898,347 (5,743)
query : 1 - 566 (566/566)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016292)
HIX0016292
HIT000518643 (
ENST00000420709
)
(Melanoma antigen preferentially expressed in tumors; Opa-interacting protein 4; OIP-4; Preferentially expressed antigen of melanoma;)
genome : 22,892,643 - 22,901,490 (8,848)
query : 1 - 705 (705/705)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016292)
HIX0016292
HIT000580533 (
ENST00000476336
)
(Melanoma antigen preferentially expressed in tumors; Opa-interacting protein 4; OIP-4; Preferentially expressed antigen of melanoma;)
genome : 22,892,668 - 22,900,141 (7,474)
query : 1 - 589 (589/589)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21.5, mito_pero 12, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016292)
HIX0016292
HIT000589331 (
ENST00000485532
)
(Melanoma antigen preferentially expressed in tumors; Opa-interacting protein 4; OIP-4; Preferentially expressed antigen of melanoma;)
genome : 22,892,721 - 22,896,600 (3,880)
query : 1 - 709 (709/709)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 7.5, cyto_nucl 7, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016292)
HIX0016292
HIT000505618 (
ENST00000406503
)
(Melanoma antigen preferentially expressed in tumors; Opa-interacting protein 4; OIP-4; Preferentially expressed antigen of melanoma;)
genome : 22,893,176 - 22,901,674 (8,499)
query : 1 - 740 (740/740)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, nucl 3.5, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016292)
HIX0016292
HIT000540415 (
ENST00000442481
)
(Conserved hypothetical protein.)
genome : 22,893,241 - 22,900,012 (6,772)
query : 1 - 581 (581/581)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, extr 10, mito_nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016292)
HIX0016292
HIT000504491 (
ENST00000403441
)
(Melanoma antigen preferentially expressed in tumors; Opa-interacting protein 4; OIP-4; Preferentially expressed antigen of melanoma;)
genome : 22,893,274 - 22,900,174 (6,901)
query : 1 - 567 (567/567)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto_nucl 4.33333, cyto 4, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016292)
HIX0175382
HIT000096055
(
BC040190
)
Representative transcript
(Disrupted in schizophrenia 1 protein isoform c.)
genome : 22,901,750 - 22,909,007 (7,258)
query : 1 - 3,110 (3,110/3,124)
3 exons
identity = 0.997
5'(0.985;0.991;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, extr 10, cyto_nucl 8.5, mito 4, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175382)
HIX0041375
HIT000562753 (
NR_024591
)
(Putative POM121-like protein 1-like;)
genome : 22,974,028 - 22,987,012 (12,985)
query : 1 - 3,995 (3,995/3,995)
9 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;0.985;1.000;1.000;
0.967;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 17, cyto 8.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041375)
HIX0041375
HIT000454576_08
(
DQ588045
)
(Non-protein coding transcript.)
genome : 22,974,799 - 22,974,828 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041375)
HIX0175388
HIT000266032_03
(
BC083493
)
Representative transcript
(Hypothetical protein.)
genome : 22,979,653 - 22,981,149 (1,497)
query : 1 - 1,497 (1,497/1,511)
1 exon
identity = 0.987
5'(0.987)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 6.5, cyto_nucl 6, cyto 4.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175388)
HIX0041375
HIT000425209
(
AK292412
)
Representative transcript
(Putative POM121-like protein 1-like;)
genome : 22,981,648 - 22,986,944 (5,297)
query : 1 - 1,934 (1,934/1,934)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 17, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041375)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : ENSBTAT00000029485
Pan
sp. (Chimpanzee) : XM_001149092
Pan
sp. (Chimpanzee) : XR_020898
HIX0041375
HIT000503948 (
ENST00000402027
)
(Putative POM121-like protein 1-like;)
genome : 22,981,648 - 22,986,944 (5,297)
query : 1 - 1,934 (1,934/1,934)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 17, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041375)
HIX0175476
HIT000438461_04
(
DQ571930
)
Representative transcript
(Non-protein coding transcript.)
genome : 22,984,706 - 22,984,735 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175476)
HIX0175497
HIT000456582_17
(
DQ590051
)
Representative transcript
(Non-protein coding transcript.)
genome : 22,985,594 - 22,985,623 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175497)
HIX0041375
HIT000442923_10
(
DQ576392
)
(Non-protein coding transcript.)
genome : 22,986,185 - 22,986,214 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041375)
HIX0041375
HIT000465622_13
(
DQ599091
)
(Non-protein coding transcript.)
genome : 22,986,215 - 22,986,245 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041375)
HIX0041375
HIT000467543_12
(
DQ601012
)
(Non-protein coding transcript.)
genome : 22,986,381 - 22,986,410 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041375)
HIX0041375
HIT000440042_12
(
DQ573511
)
(Non-protein coding transcript.)
genome : 22,986,547 - 22,986,576 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041375)
HIX0041375
HIT000437579_12
(
DQ571048
)
(Non-protein coding transcript.)
genome : 22,986,549 - 22,986,579 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041375)
HIX0041375
HIT000451674_14
(
DQ585143
)
(Non-protein coding transcript.)
genome : 22,986,619 - 22,986,650 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041375)
HIX0041375
HIT000451675_14
(
DQ585144
)
(Non-protein coding transcript.)
genome : 22,986,619 - 22,986,650 (32)
query : 1 - 32 (32/32)
1 exon
identity = 0.969
3'(0.969)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041375)
HIX0041375
HIT000459718_14
(
DQ593187
)
(Non-protein coding transcript.)
genome : 22,986,619 - 22,986,648 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041375)
HIX0041375
HIT000446113_12
(
DQ579582
)
(Non-protein coding transcript.)
genome : 22,986,696 - 22,986,726 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041375)
HIX0041375
HIT000466288
(
DQ599757
)
(Non-protein coding transcript.)
genome : 22,986,714 - 22,986,744 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041375)
HIX0041375
HIT000447782
(
DQ581251
)
(Non-protein coding transcript.)
genome : 22,986,731 - 22,986,761 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041375)
HIX0041180
HIT000263685
(
BC069534
)
Representative transcript
(Gamma-glutamyltransferase light chain 2; Gamma-glutamyltransferase-like protein 4;)
genome : 22,988,816 - 22,990,211 (1,396)
query : 1 - 657 (657/657)
5 exons
identity = 0.998
5'(1.000;0.992;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000101 : Gamma-glutamyltranspeptidase
IPR029055 : Nucleophile aminohydrolases, N-terminal
GO :
0003840 : Molecular Function : gamma-glutamyltransferase activity
0006749 : Biological Process : glutathione metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 19, nucl 15, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041180)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : BC054631
Pan
sp. (Chimpanzee) : XM_001163147
HIX0197173
HIT000260602_03
(
BC062711
)
Representative transcript
(Ig lambda-1 chain C regions;)
genome : 23,006,902 - 23,238,010 (231,109)
query : 6 - 893 (888/922)
4 exons
identity = 0.971
5'(0.954;0.957;0.851;0.996)3'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0227180
HIT000080278
(
AF462686
)
Representative transcript
(Ig lambda chain V-IV region Bau;)
genome : 23,011,001 - 23,011,272 (272)
query : 1 - 272 (272/285)
1 exon
identity = 0.952
5'(0.952)3'
coverage = 0.954
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 12, extr 10, cyto 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227180)
HIX0227168
HIT000085160
(
AY190821
)
Representative transcript
(Conserved hypothetical protein.)
genome : 23,029,233 - 23,029,743 (511)
query : 1 - 345 (345/381)
2 exons
identity = 0.991
5'(0.978;0.993)3'
coverage = 0.906
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227168)
HIX0175709
HIT000536119 (
ENST00000438185
)
(Hypothetical short protein.)
genome : 23,035,263 - 23,035,797 (535)
query : 1 - 451 (451/451)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, mito 4, cyto 3.5, cyto_pero 2.5,
mito_nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175709)
HIX0227175
HIT000073427
(
AF194613
)
Representative transcript
(Conserved hypothetical protein.)
genome : 23,040,610 - 23,040,916 (307)
query : 1 - 306 (306/333)
1 exon
identity = 0.980
5'(0.980)3'
coverage = 0.919
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto_nucl 7.66667, mito_pero 7.66667, cyto 7,
cyto_pero 6.16667, nucl 6, E.R._mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227175)
HIX0227167
HIT000321724
(
X52112
)
Representative transcript
(Conserved hypothetical protein.)
genome : 23,054,904 - 23,055,691 (788)
query : 1 - 354 (354/390)
2 exons
identity = 0.977
5'(1.000;0.974)3'
coverage = 0.908
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227167)
HIX0227177
HIT000321818
(
X53070
)
Representative transcript
(Conserved hypothetical protein.)
genome : 23,063,122 - 23,063,638 (517)
query : 3 - 372 (370/408)
2 exons
identity = 0.997
5'(1.000;0.997)3'
coverage = 0.907
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227177)
HIX0227212
pHIT000095827 ( pHIT000095827 )
Representative transcript
(Conserved hypothetical protein.)
genome : 23,077,108 - 23,099,956 (22,849)
query : 1 - 465 (465/465)
4 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227212)
CAGE tag :
H39BB83E2109
HIX0197173
HIT000323345_03
(
X72747
)
(Hypothetical protein.)
genome : 23,101,405 - 23,264,821 (163,417)
query : 2 - 387 (386/387)
3 exons
identity = 0.957
5'(0.973;0.868;0.937)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.5, nucl 11, extr 10, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000469226_02
(
EF589407
)
(Hypothetical protein.)
genome : 23,101,404 - 23,264,812 (163,409)
query : 1 - 382 (382/383)
3 exons
identity = 0.956
5'(0.979;0.842;0.909)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, cyto_nucl 7.16667, nucl 6, cyto_pero 4.83333,
cyto 4, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000469248_03
(
EF589429
)
(Hypothetical protein.)
genome : 23,101,404 - 23,264,812 (163,409)
query : 1 - 378 (378/379)
3 exons
identity = 0.956
5'(0.976;0.842;0.926)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto_nucl 7.66667, nucl 7, E.R._mito 7,
cyto_pero 4.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000073414
(
AF194600
)
(Conserved hypothetical protein.)
genome : 23,101,404 - 23,101,710 (307)
query : 1 - 306 (306/333)
1 exon
identity = 0.971
5'(0.971)3'
coverage = 0.919
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 9.16667, nucl 8, cyto 8, mito 8,
cyto_pero 6.16667, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000222839
(
U96393
)
(Conserved hypothetical protein.)
genome : 23,101,404 - 23,101,700 (297)
query : 1 - 297 (297/322)
1 exon
identity = 0.983
5'(0.983)3'
coverage = 0.922
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 8.16667, cyto 7.5, extr_plas 7.5,
nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000217971
(
U09901
)
(Conserved hypothetical protein.)
genome : 23,101,414 - 23,101,697 (284)
query : 11 - 294 (284/297)
1 exon
identity = 0.951
5'(0.951)3'
coverage = 0.956
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 15, extr 7, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000327214
(
Z46313
)
(Conserved hypothetical protein.)
genome : 23,101,410 - 23,101,698 (289)
query : 1 - 289 (289/291)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.993
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 9.66667, mito 9, cyto 7.5,
cyto_pero 6.66667, nucl 6.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000327215
(
Z46314
)
(Conserved hypothetical protein.)
genome : 23,101,410 - 23,101,694 (285)
query : 1 - 285 (285/285)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 9.66667, mito 9, cyto 7.5,
cyto_pero 6.66667, nucl 6.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000217952
(
U09882
)
(Conserved hypothetical protein.)
genome : 23,101,416 - 23,101,691 (276)
query : 1 - 276 (276/285)
1 exon
identity = 0.971
5'(0.971)3'
coverage = 0.968
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 13.5, extr 9, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000064050
(
AF047216
)
(Conserved hypothetical protein.)
genome : 23,101,428 - 23,101,700 (273)
query : 1 - 273 (273/303)
1 exon
identity = 0.982
5'(0.982)3'
coverage = 0.901
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.8333, nucl 11, cyto 10.5,
cyto_pero 7.16667, mito_nucl 7.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000326037
(
Y17940
)
(Conserved hypothetical protein.)
genome : 23,101,428 - 23,101,698 (271)
query : 1 - 271 (271/285)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 0.951
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.6667, extr 12, cyto 9.5, nucl 8.5,
cyto_pero 6.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0115813
HIT000341185
(
DQ098743
)
Representative transcript
(Ig lambda chain V-III region LOI;)
genome : 23,114,786 - 23,115,082 (297)
query : 1 - 297 (297/328)
1 exon
identity = 0.976
5'(0.976)3'
coverage = 0.905
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 15.5, cyto 9.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0115813)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : XM_001161517
HIX0227171
HIT000341225
(
DQ098783
)
Representative transcript
(Conserved hypothetical protein.)
genome : 23,135,199 - 23,135,492 (294)
query : 1 - 294 (294/325)
1 exon
identity = 0.973
5'(0.973)3'
coverage = 0.905
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 13, cyto_nucl 6.16667, nucl 5.5, cyto 5.5,
cyto_pero 4.83333, mito_nucl 4.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227171)
HIX0227182
HIT000085166
(
AY190827
)
Representative transcript
(Conserved hypothetical protein.)
genome : 23,154,279 - 23,154,774 (496)
query : 1 - 343 (343/378)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.907
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227182)
HIX0227174
HIT000073368
(
AF194554
)
Representative transcript
(Conserved hypothetical protein.)
genome : 23,165,487 - 23,165,783 (297)
query : 1 - 297 (297/330)
1 exon
identity = 0.976
5'(0.976)3'
coverage = 0.900
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, nucl 8.5, cyto_mito 8.5, cyto_nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227174)
HIX0227246
HIT000645927
(
FJ385507
)
Representative transcript
(Conserved hypothetical protein.)
genome : 23,198,962 - 23,199,231 (270)
query : 1 - 270 (270/288)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 0.938
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 9.5, cyto_nucl 9.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227246)
HIX0227176
HIT000073629
(
AF194815
)
Representative transcript
(Conserved hypothetical protein.)
genome : 23,213,901 - 23,214,211 (311)
query : 1 - 311 (311/345)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 0.901
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227176)
HIX0197173
HIT000216746
(
S77601
)
(Ig lambda chain V-IV region Bau;)
genome : 23,222,914 - 23,243,322 (20,409)
query : 11 - 577 (567/577)
4 exons
identity = 0.974
5'(1.000;0.993;0.796;0.988)3'
coverage = 0.983
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, mito 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000322136
(
X57803
)
(Ig lambda chain V-IV region Bau;)
genome : 23,222,915 - 23,248,589 (25,675)
query : 1 - 478 (478/478)
4 exons
identity = 0.971
5'(0.986;0.989;0.811;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, mito 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000322135
(
X57802
)
(Ig lambda-2 chain C regions;)
genome : 23,222,915 - 23,243,481 (20,567)
query : 1 - 725 (725/725)
4 exons
identity = 0.983
5'(1.000;0.989;0.833;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 4, mito 2, cyto_nucl 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000322148
(
X57816
)
(Ig lambda-2 chain C regions;)
genome : 23,222,916 - 23,243,589 (20,674)
query : 1 - 831 (831/839)
4 exons
identity = 0.971
5'(0.971;0.960;0.815;0.998)3'
coverage = 0.990
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000322150
(
X57818
)
(Ig lambda-2 chain C regions;)
genome : 23,222,929 - 23,243,561 (20,633)
query : 1 - 791 (791/791)
4 exons
identity = 0.966
5'(1.000;0.946;0.778;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 3, mito 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000563728
(
AB369252
)
(Ig lambda-2 chain C regions;)
genome : 23,222,938 - 23,248,828 (25,891)
query : 1 - 696 (696/696)
4 exons
identity = 0.984
5'(1.000;0.969;0.975;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 3, mito 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000085164
(
AY190825
)
(Conserved hypothetical protein.)
genome : 23,222,938 - 23,241,834 (18,897)
query : 1 - 375 (375/375)
3 exons
identity = 0.973
5'(1.000;0.993;0.849)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, mito 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000062838
(
AF026919
)
(Conserved hypothetical protein.)
genome : 23,222,938 - 23,223,571 (634)
query : 1 - 341 (341/378)
2 exons
identity = 0.962
5'(1.000;0.956)3'
coverage = 0.902
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, mito 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000062844
(
AF026925
)
(Conserved hypothetical protein.)
genome : 23,222,938 - 23,223,571 (634)
query : 1 - 341 (341/378)
2 exons
identity = 0.956
5'(1.000;0.949)3'
coverage = 0.902
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000192667
(
L26400
)
(Conserved hypothetical protein.)
genome : 23,222,938 - 23,223,571 (634)
query : 1 - 341 (341/377)
2 exons
identity = 0.979
5'(1.000;0.976)3'
coverage = 0.905
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000652575
(
HM996270
)
(Ig lambda chain V-IV region X;)
genome : 23,223,276 - 23,243,208 (19,933)
query : 11 - 394 (384/394)
3 exons
identity = 0.964
5'(0.989;0.870;0.925)3'
coverage = 0.975
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 16, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000342688
(
DQ322762
)
(Conserved hypothetical protein.)
genome : 23,223,293 - 23,264,816 (41,524)
query : 12 - 376 (365/378)
3 exons
identity = 0.970
5'(0.993;0.895;0.914)3'
coverage = 0.966
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 12, cyto_nucl 8.5, cyto 3, mito 2,
golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000342689
(
DQ322763
)
(Conserved hypothetical protein.)
genome : 23,223,293 - 23,264,816 (41,524)
query : 12 - 376 (365/378)
3 exons
identity = 0.970
5'(0.993;0.895;0.914)3'
coverage = 0.966
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 12, cyto_nucl 8.5, cyto 3, mito 2,
golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000645870
(
FJ385450
)
(Conserved hypothetical protein.)
genome : 23,223,283 - 23,263,610 (40,328)
query : 2 - 328 (327/348)
2 exons
identity = 0.970
5'(0.993;0.822)3'
coverage = 0.940
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 13.5, cyto 7.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000645862
(
FJ385442
)
(Conserved hypothetical protein.)
genome : 23,223,283 - 23,241,837 (18,555)
query : 2 - 330 (329/351)
2 exons
identity = 0.979
5'(0.996;0.867)3'
coverage = 0.937
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 8.83333, nucl 8, cyto 7.5,
cyto_pero 4.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000342864
(
DQ322938
)
(Conserved hypothetical protein.)
genome : 23,223,293 - 23,237,605 (14,313)
query : 12 - 379 (368/381)
3 exons
identity = 0.962
5'(0.985;0.846;0.927)3'
coverage = 0.966
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, extr 11, cyto_nucl 9.5, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000342906
(
DQ322980
)
(Conserved hypothetical protein.)
genome : 23,223,288 - 23,237,605 (14,318)
query : 7 - 379 (373/381)
3 exons
identity = 0.973
5'(0.996;0.868;0.927)3'
coverage = 0.979
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 15.5, cyto 8, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000469273
(
EF589454
)
(Conserved hypothetical protein.)
genome : 23,223,288 - 23,264,812 (41,525)
query : 1 - 366 (366/367)
3 exons
identity = 0.970
5'(0.989;0.895;0.926)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 14, extr 9, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000558428
(
FJ039804
)
(Conserved hypothetical protein.)
genome : 23,223,288 - 23,264,805 (41,518)
query : 1 - 359 (359/359)
3 exons
identity = 0.959
5'(0.979;0.868;0.915)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 14.5, extr 7, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000341182
(
DQ098740
)
(Conserved hypothetical protein.)
genome : 23,223,288 - 23,247,205 (23,918)
query : 1 - 322 (322/322)
2 exons
identity = 0.988
5'(1.000;0.907)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 14, extr 7, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000342149
(
DQ187500
)
(Conserved hypothetical protein.)
genome : 23,223,293 - 23,247,205 (23,913)
query : 6 - 322 (317/322)
2 exons
identity = 0.975
5'(0.985;0.905)3'
coverage = 0.984
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 9.5, cyto_nucl 9.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000393807
(
DQ841067
)
(Conserved hypothetical protein.)
genome : 23,223,293 - 23,247,204 (23,912)
query : 6 - 318 (313/319)
2 exons
identity = 0.975
5'(0.982;0.927)3'
coverage = 0.981
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 9.5, cyto_nucl 9.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000557842
(
EU599349
)
(Conserved hypothetical protein.)
genome : 23,223,288 - 23,247,205 (23,918)
query : 1 - 319 (319/319)
2 exons
identity = 0.960
5'(0.968;0.905)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 15.5, cyto 9.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000065357
(
AF063760
)
(Conserved hypothetical protein.)
genome : 23,223,288 - 23,247,204 (23,917)
query : 1 - 321 (321/321)
2 exons
identity = 0.984
5'(0.996;0.902)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 14, extr 7, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000065373
(
AF063778
)
(Conserved hypothetical protein.)
genome : 23,223,288 - 23,247,204 (23,917)
query : 1 - 318 (318/318)
2 exons
identity = 0.960
5'(0.968;0.902)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 19, nucl 17.5, cyto 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000065375
(
AF063780
)
(Conserved hypothetical protein.)
genome : 23,223,288 - 23,247,204 (23,917)
query : 1 - 318 (318/318)
2 exons
identity = 0.975
5'(0.989;0.878)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 15.5, cyto 9.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000469219
(
EF589400
)
(Conserved hypothetical protein.)
genome : 23,223,288 - 23,243,472 (20,185)
query : 1 - 642 (642/642)
3 exons
identity = 0.964
5'(0.934;0.900;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 17, cyto 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000557844
(
EU599351
)
(Conserved hypothetical protein.)
genome : 23,223,288 - 23,243,468 (20,181)
query : 1 - 632 (632/632)
3 exons
identity = 0.967
5'(0.966;0.778;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 12.5, cyto 6.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000083686
(
AY043110
)
(Conserved hypothetical protein.)
genome : 23,223,288 - 23,243,268 (19,981)
query : 1 - 432 (432/432)
3 exons
identity = 0.975
5'(0.989;0.895;0.967)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15, cyto 7.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000326564
(
Z18331
)
(Conserved hypothetical protein.)
genome : 23,223,288 - 23,243,193 (19,906)
query : 1 - 360 (360/360)
3 exons
identity = 0.972
5'(0.989;0.921;0.911)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 15.5, extr 7, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000080251
(
AF462659
)
(Conserved hypothetical protein.)
genome : 23,223,288 - 23,241,840 (18,553)
query : 1 - 327 (327/334)
2 exons
identity = 0.951
5'(0.971;0.830)3'
coverage = 0.979
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15.5, extr 7, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000244993
(
AJ224900
)
(Conserved hypothetical protein.)
genome : 23,223,288 - 23,241,840 (18,553)
query : 1 - 324 (324/324)
2 exons
identity = 0.982
5'(1.000;0.872)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 14, extr 7, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000341155
(
DQ098713
)
(Conserved hypothetical protein.)
genome : 23,223,288 - 23,241,837 (18,550)
query : 1 - 321 (321/324)
2 exons
identity = 0.963
5'(0.971;0.909)3'
coverage = 0.991
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 13, extr 8, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000060336
(
AB064027
)
(Conserved hypothetical protein.)
genome : 23,223,288 - 23,241,837 (18,550)
query : 1 - 321 (321/321)
2 exons
identity = 0.963
5'(0.971;0.909)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 16.5, extr 5, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000060346
(
AB064037
)
(Conserved hypothetical protein.)
genome : 23,223,288 - 23,241,837 (18,550)
query : 1 - 321 (321/321)
2 exons
identity = 0.981
5'(0.993;0.909)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 17.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000192620
(
L25296
)
(Conserved hypothetical protein.)
genome : 23,223,288 - 23,241,837 (18,550)
query : 1 - 321 (321/321)
2 exons
identity = 0.988
5'(1.000;0.909)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 14, extr 7, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000469368
(
EF589549
)
(Conserved hypothetical protein.)
genome : 23,223,288 - 23,241,837 (18,550)
query : 1 - 321 (321/321)
2 exons
identity = 0.957
5'(0.964;0.909)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 15.5, cyto 8, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000486936
(
AB363347
)
(Conserved hypothetical protein.)
genome : 23,223,288 - 23,241,837 (18,550)
query : 1 - 321 (321/321)
2 exons
identity = 0.951
5'(0.957;0.909)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 17.5, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000486937
(
AB363348
)
(Conserved hypothetical protein.)
genome : 23,223,288 - 23,241,837 (18,550)
query : 1 - 321 (321/321)
2 exons
identity = 0.957
5'(0.971;0.864)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 19, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000486954
(
AB363365
)
(Conserved hypothetical protein.)
genome : 23,223,288 - 23,241,837 (18,550)
query : 1 - 321 (321/321)
2 exons
identity = 0.951
5'(0.961;0.886)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 18, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000342726
(
DQ322800
)
(Conserved hypothetical protein.)
genome : 23,223,293 - 23,241,836 (18,544)
query : 6 - 320 (315/320)
2 exons
identity = 0.965
5'(0.978;0.884)3'
coverage = 0.984
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 8.5, extr_plas 8.5, cyto_nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000342145
(
DQ187496
)
(Conserved hypothetical protein.)
genome : 23,223,293 - 23,241,835 (18,543)
query : 6 - 319 (314/319)
2 exons
identity = 0.975
5'(0.982;0.929)3'
coverage = 0.984
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto_nucl 11.5, extr 8, cyto 6, mito 2,
golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000342150
(
DQ187501
)
(Conserved hypothetical protein.)
genome : 23,223,293 - 23,241,835 (18,543)
query : 6 - 319 (314/319)
2 exons
identity = 0.978
5'(0.985;0.929)3'
coverage = 0.984
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 9.5, cyto_nucl 9.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000342271
(
DQ187622
)
(Conserved hypothetical protein.)
genome : 23,223,293 - 23,241,835 (18,543)
query : 6 - 319 (314/319)
2 exons
identity = 0.978
5'(0.989;0.905)3'
coverage = 0.984
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 9.5, cyto_nucl 9.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000393820
(
DQ841080
)
(Conserved hypothetical protein.)
genome : 23,223,293 - 23,241,835 (18,543)
query : 6 - 319 (314/319)
2 exons
identity = 0.965
5'(0.985;0.833)3'
coverage = 0.984
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 9.5, cyto_nucl 9.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000715139
(
HQ172110
)
(Conserved hypothetical protein.)
genome : 23,223,288 - 23,241,834 (18,547)
query : 1 - 318 (318/319)
2 exons
identity = 0.950
5'(0.964;0.854)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 13, extr 8, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000065356
(
AF063759
)
(Conserved hypothetical protein.)
genome : 23,223,288 - 23,241,834 (18,547)
query : 1 - 318 (318/318)
2 exons
identity = 0.969
5'(0.979;0.902)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 13.5, extr 7, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000065421
(
AF064507
)
(Conserved hypothetical protein.)
genome : 23,223,288 - 23,241,834 (18,547)
query : 1 - 318 (318/318)
2 exons
identity = 0.988
5'(1.000;0.902)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 14, extr 7, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000073457
(
AF194643
)
(Conserved hypothetical protein.)
genome : 23,223,288 - 23,241,834 (18,547)
query : 1 - 318 (318/318)
2 exons
identity = 0.988
5'(1.000;0.902)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 14, extr 7, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000073458
(
AF194644
)
(Conserved hypothetical protein.)
genome : 23,223,288 - 23,241,834 (18,547)
query : 1 - 321 (321/321)
2 exons
identity = 0.972
5'(0.989;0.857)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 12, extr 9, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000073459
(
AF194645
)
(Conserved hypothetical protein.)
genome : 23,223,288 - 23,241,834 (18,547)
query : 1 - 318 (318/318)
2 exons
identity = 0.988
5'(1.000;0.902)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 14, extr 7, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000073460
(
AF194646
)
(Conserved hypothetical protein.)
genome : 23,223,288 - 23,241,834 (18,547)
query : 1 - 318 (318/318)
2 exons
identity = 0.981
5'(0.993;0.902)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 13, cyto 8, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000073461
(
AF194647
)
(Conserved hypothetical protein.)
genome : 23,223,288 - 23,241,834 (18,547)
query : 1 - 318 (318/318)
2 exons
identity = 0.950
5'(0.961;0.878)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 13, extr 8, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000008505
(
AK025231
)
(Conserved hypothetical protein.)
genome : 23,230,009 - 23,232,346 (2,338)
query : 33 - 2,362 (2,330/2,378)
1 exon
identity = 0.986
5'(0.986)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 14, cyto 9, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000035699
(
BC012159
)
(Ig lambda-2 chain C regions;)
genome : 23,230,019 - 23,248,969 (18,951)
query : 1 - 878 (878/899)
2 exons
identity = 0.999
5'(1.000;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 9.5, cyto_nucl 8, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0197173
HIT000026720
(
AL713800
)
(Conserved hypothetical protein.)
genome : 23,247,413 - 23,248,971 (1,559)
query : 1 - 1,487 (1,487/1,505)
2 exons
identity = 0.968
5'(0.957;0.991)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, extr 7, cyto_nucl 2, golg 2, nucl 1.5,
cyto 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0203240
HIT000513573 (
ENST00000415639
)
(ATPase, F0 complex, subunit F6, mitochondrial family protein.)
genome : 23,330,438 - 23,330,756 (319)
query : 1 - 319 (319/319)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22.5, mito_pero 13.5, extr 4, pero 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203240)
HIX0115828
HIT000518878 (
ENST00000420944
)
(Conserved hypothetical protein.)
genome : 23,332,865 - 23,350,523 (17,659)
query : 1 - 258 (258/258)
3 exons
identity = 0.981
5'(0.958;1.000;0.990)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10, plas 8, cyto 5, nucl 4, cysk_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0115828)
HIX0139296
HIT000458763
(
DQ592232
)
Representative transcript
(Non-protein coding transcript.)
genome : 23,351,866 - 23,351,896 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0139296)
HIX0016293
HIT000034126
(
BC008986
)
(Rhabdoid tumor deletion region protein 1;)
genome : 23,401,593 - 23,484,209 (82,617)
query : 1 - 1,220 (1,220/1,258)
7 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.996;1.000)5'
coverage = 1.000
InterPro :
IPR011989 : Armadillo-like helical
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 12.5, pero 3, nucl 2.5,
mito_pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016293)
HIX0016293
HIT000070981
(
AF133587
)
Representative transcript
(Rhabdoid tumor deletion region protein 1;)
genome : 23,401,593 - 23,484,241 (82,649)
query : 1 - 1,252 (1,252/1,286)
7 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.996;1.000)5'
coverage = 1.000
InterPro :
IPR011989 : Armadillo-like helical
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 12.5, pero 3, nucl 2.5,
mito_pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016293)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK017008
Danio
sp. (Zebrafish) : BC093315
Gallus
sp. (Chicken) : BX934413
Bos
sp. (Cow) : ENSBTAT00000050607
Canis
sp. (Dog) : ENSCAFT00000036313
Pongo
sp. (Orangutan) : ENSPPYT00000013486
Rattus
sp. (Rat) : ENSRNOT00000001780
Takifugu
sp. (Fugu) : SINFRUT00000163270
Macaca
sp. (Macaque) : XM_001092527
Pan
sp. (Chimpanzee) : XM_001169229
Monodelphis
sp. (Opossum) : XM_001378857
Equus
sp. (Horse) : XM_001914722
HIX0016293
HIT000204807 (
NM_014433
)
(Rhabdoid tumor deletion region protein 1;)
genome : 23,401,593 - 23,484,241 (82,649)
query : 1 - 1,252 (1,252/1,286)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 12.5, pero 3, nucl 2.5,
mito_pero 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016293)
HIX0016293
HIT000102976 (
ENST00000216036
)
(Rhabdoid tumor deletion region protein 1;)
genome : 23,401,593 - 23,484,280 (82,688)
query : 1 - 1,291 (1,291/1,291)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 12.5, pero 3, nucl 2.5,
mito_pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016293)
HIX0016293
HIT000267501
(
CR456567
)
(Rhabdoid tumor deletion region protein 1;)
genome : 23,401,618 - 23,482,661 (81,044)
query : 5 - 1,127 (1,123/1,127)
6 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.996)5'
coverage = 0.996
InterPro :
IPR011989 : Armadillo-like helical
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 12.5, pero 3, nucl 2.5,
mito_pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016293)
HIX0027841
HIT000051906
(
BC037333
)
(Guanine nucleotide-binding protein G(z) subunit alpha; G(x) alpha chain; Gz-alpha;)
genome : 23,412,540 - 23,467,224 (54,685)
query : 10 - 3,351 (3,342/3,365)
3 exons
identity = 0.997
5'(0.991;0.998;0.996)3'
coverage = 0.997
InterPro :
IPR001019 : Guanine nucleotide binding protein (G-protein), alpha subunit
IPR001408 : G-protein alpha subunit, group I
IPR011025 : G protein alpha subunit, helical insertion
GO :
0003924 : Molecular Function : GTPase activity
0004871 : Molecular Function : signal transducer activity
0005525 : Molecular Function : GTP binding
0006184 : Biological Process : GTP catabolic process
0007165 : Biological Process : signal transduction
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007188 : Biological Process : adenylate cyclase-modulating G-protein coupled receptor signaling pathway
0019001 : Molecular Function : guanyl nucleotide binding
0031683 : Molecular Function : G-protein beta/gamma-subunit complex binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 15, cyto 12, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027841)
HIX0027841
HIT000105915 (
ENST00000248996
)
(Guanine nucleotide-binding protein G(z) subunit alpha; G(x) alpha chain; Gz-alpha;)
genome : 23,412,540 - 23,467,224 (54,685)
query : 1 - 3,340 (3,340/3,340)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 15, cyto 12, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027841)
HIX0027841
HIT000050910
(
BC026342
)
(Guanine nucleotide-binding protein G(z) subunit alpha; G(x) alpha chain; Gz-alpha;)
genome : 23,412,669 - 23,467,219 (54,551)
query : 1 - 3,205 (3,205/3,250)
3 exons
identity = 0.999
5'(0.989;0.999;0.999)3'
coverage = 1.000
InterPro :
IPR001019 : Guanine nucleotide binding protein (G-protein), alpha subunit
IPR001408 : G-protein alpha subunit, group I
IPR011025 : G protein alpha subunit, helical insertion
GO :
0003924 : Molecular Function : GTPase activity
0004871 : Molecular Function : signal transducer activity
0005525 : Molecular Function : GTP binding
0006184 : Biological Process : GTP catabolic process
0007165 : Biological Process : signal transduction
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007188 : Biological Process : adenylate cyclase-modulating G-protein coupled receptor signaling pathway
0019001 : Molecular Function : guanyl nucleotide binding
0031683 : Molecular Function : G-protein beta/gamma-subunit complex binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 15, cyto 12, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027841)
HIX0027841
HIT000198995 (
NM_002073
)
(Guanine nucleotide-binding protein G(z) subunit alpha; G(x) alpha chain; Gz-alpha;)
genome : 23,412,669 - 23,467,224 (54,556)
query : 1 - 3,211 (3,211/3,225)
3 exons
identity = 1.000
5'(1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 15, cyto 12, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027841)
HIX0027841
HIT000431385
(
AK312519
)
Representative transcript
(Guanine nucleotide-binding protein G(z) subunit alpha; G(x) alpha chain; Gz-alpha;)
genome : 23,412,728 - 23,465,618 (52,891)
query : 1 - 1,546 (1,546/1,546)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001019 : Guanine nucleotide binding protein (G-protein), alpha subunit
IPR001408 : G-protein alpha subunit, group I
IPR011025 : G protein alpha subunit, helical insertion
GO :
0003924 : Molecular Function : GTPase activity
0004871 : Molecular Function : signal transducer activity
0005525 : Molecular Function : GTP binding
0006184 : Biological Process : GTP catabolic process
0007165 : Biological Process : signal transduction
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007188 : Biological Process : adenylate cyclase-modulating G-protein coupled receptor signaling pathway
0019001 : Molecular Function : guanyl nucleotide binding
0031683 : Molecular Function : G-protein beta/gamma-subunit complex binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 15, cyto 12, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027841)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK080716
Macaca
sp. (Macaque) : AY650382
Gallus
sp. (Chicken) : CR352420
Danio
sp. (Zebrafish) : ENSDART00000100865
Equus
sp. (Horse) : ENSECAT00000011780
Monodelphis
sp. (Opossum) : ENSMODT00000012796
Oryzias
sp. (Medaka) : ENSORLT00000012127
Pongo
sp. (Orangutan) : ENSPPYT00000013487
Pan
sp. (Chimpanzee) : ENSPTRT00000026404
Tetraodon
sp. (Tetraodon) : GSTENT00017341001
Rattus
sp. (Rat) : J03773
Takifugu
sp. (Fugu) : SINFRUT00000159855
Canis
sp. (Dog) : XM_843512
HIX0027841
HIT000488277
(
AK293653
)
(Guanine nucleotide-binding protein G(z) subunit alpha; G(x) alpha chain; Gz-alpha;)
genome : 23,412,732 - 23,465,931 (53,200)
query : 1 - 1,429 (1,429/1,429)
4 exons
identity = 0.999
5'(1.000;1.000;0.998;1.000)3'
coverage = 1.000
InterPro :
IPR001019 : Guanine nucleotide binding protein (G-protein), alpha subunit
IPR001408 : G-protein alpha subunit, group I
IPR011025 : G protein alpha subunit, helical insertion
GO :
0003924 : Molecular Function : GTPase activity
0004871 : Molecular Function : signal transducer activity
0005525 : Molecular Function : GTP binding
0006184 : Biological Process : GTP catabolic process
0007165 : Biological Process : signal transduction
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007188 : Biological Process : adenylate cyclase-modulating G-protein coupled receptor signaling pathway
0019001 : Molecular Function : guanyl nucleotide binding
0031683 : Molecular Function : G-protein beta/gamma-subunit complex binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, cyto_nucl 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027841)
HIX0027841
HIT000596020 (
ENST00000492538
)
(Hypothetical protein.)
genome : 23,412,760 - 23,437,903 (25,144)
query : 1 - 652 (652/652)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, extr 4, cyto 2, mito 2, extr_plas 2,
cyto_mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027841)
HIX0027890
HIT000046620
(
AK126747
)
Representative transcript
(Conserved hypothetical protein.)
genome : 23,419,984 - 23,423,592 (3,609)
query : 1 - 3,609 (3,609/3,609)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, plas 3, cyto 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027890)
HIX0027841
HIT000265722
(
BC078163
)
(Guanine nucleotide-binding protein G(z) subunit alpha; G(x) alpha chain; Gz-alpha;)
genome : 23,437,508 - 23,467,219 (29,712)
query : 1 - 3,045 (3,045/3,063)
2 exons
identity = 0.998
5'(0.999;0.998)3'
coverage = 1.000
InterPro :
IPR001019 : Guanine nucleotide binding protein (G-protein), alpha subunit
IPR001408 : G-protein alpha subunit, group I
IPR011025 : G protein alpha subunit, helical insertion
GO :
0003924 : Molecular Function : GTPase activity
0004871 : Molecular Function : signal transducer activity
0005525 : Molecular Function : GTP binding
0006184 : Biological Process : GTP catabolic process
0007165 : Biological Process : signal transduction
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007188 : Biological Process : adenylate cyclase-modulating G-protein coupled receptor signaling pathway
0019001 : Molecular Function : guanyl nucleotide binding
0031683 : Molecular Function : G-protein beta/gamma-subunit complex binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 15, cyto 12, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027841)
HIX0027841
HIT000267429
(
CR456495
)
(Guanine nucleotide-binding protein G(z) subunit alpha; G(x) alpha chain; Gz-alpha;)
genome : 23,437,796 - 23,465,659 (27,864)
query : 1 - 1,196 (1,196/1,196)
2 exons
identity = 0.999
5'(0.999;1.000)3'
coverage = 1.000
InterPro :
IPR001019 : Guanine nucleotide binding protein (G-protein), alpha subunit
IPR001408 : G-protein alpha subunit, group I
IPR011025 : G protein alpha subunit, helical insertion
GO :
0003924 : Molecular Function : GTPase activity
0004871 : Molecular Function : signal transducer activity
0005525 : Molecular Function : GTP binding
0006184 : Biological Process : GTP catabolic process
0007165 : Biological Process : signal transduction
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007188 : Biological Process : adenylate cyclase-modulating G-protein coupled receptor signaling pathway
0019001 : Molecular Function : guanyl nucleotide binding
0031683 : Molecular Function : G-protein beta/gamma-subunit complex binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 15, cyto 12, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027841)
HIX0027841
HIT000191151
(
J03260
)
(Guanine nucleotide-binding protein G(z) subunit alpha; G(x) alpha chain; Gz-alpha;)
genome : 23,437,876 - 23,467,218 (29,343)
query : 5 - 2,679 (2,675/2,679)
2 exons
identity = 0.996
5'(0.999;0.995)3'
coverage = 0.999
InterPro :
IPR001019 : Guanine nucleotide binding protein (G-protein), alpha subunit
IPR001408 : G-protein alpha subunit, group I
IPR011025 : G protein alpha subunit, helical insertion
GO :
0003924 : Molecular Function : GTPase activity
0004871 : Molecular Function : signal transducer activity
0005525 : Molecular Function : GTP binding
0006184 : Biological Process : GTP catabolic process
0007165 : Biological Process : signal transduction
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007188 : Biological Process : adenylate cyclase-modulating G-protein coupled receptor signaling pathway
0019001 : Molecular Function : guanyl nucleotide binding
0031683 : Molecular Function : G-protein beta/gamma-subunit complex binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 15, cyto 12, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027841)
HIX0027841
HIT000335728
(
BC096828
)
(Guanine nucleotide-binding protein G(z) subunit alpha; G(x) alpha chain; Gz-alpha;)
genome : 23,437,880 - 23,465,618 (27,739)
query : 1 - 1,071 (1,071/1,071)
2 exons
identity = 0.999
5'(0.999;1.000)3'
coverage = 1.000
InterPro :
IPR001019 : Guanine nucleotide binding protein (G-protein), alpha subunit
IPR001408 : G-protein alpha subunit, group I
IPR011025 : G protein alpha subunit, helical insertion
GO :
0003924 : Molecular Function : GTPase activity
0004871 : Molecular Function : signal transducer activity
0005525 : Molecular Function : GTP binding
0006184 : Biological Process : GTP catabolic process
0007165 : Biological Process : signal transduction
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007188 : Biological Process : adenylate cyclase-modulating G-protein coupled receptor signaling pathway
0019001 : Molecular Function : guanyl nucleotide binding
0031683 : Molecular Function : G-protein beta/gamma-subunit complex binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 15, cyto 12, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027841)
HIX0027841
HIT000080747
(
AF493899
)
(Guanine nucleotide-binding protein G(z) subunit alpha; G(x) alpha chain; Gz-alpha;)
genome : 23,437,883 - 23,465,618 (27,736)
query : 1 - 1,068 (1,068/1,068)
2 exons
identity = 0.999
5'(0.999;1.000)3'
coverage = 1.000
InterPro :
IPR001019 : Guanine nucleotide binding protein (G-protein), alpha subunit
IPR001408 : G-protein alpha subunit, group I
IPR011025 : G protein alpha subunit, helical insertion
GO :
0003924 : Molecular Function : GTPase activity
0004871 : Molecular Function : signal transducer activity
0005525 : Molecular Function : GTP binding
0006184 : Biological Process : GTP catabolic process
0007165 : Biological Process : signal transduction
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007188 : Biological Process : adenylate cyclase-modulating G-protein coupled receptor signaling pathway
0019001 : Molecular Function : guanyl nucleotide binding
0031683 : Molecular Function : G-protein beta/gamma-subunit complex binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 15, cyto 12, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027841)
HIX0138986
HIT000438407
(
DQ571876
)
Representative transcript
(Non-protein coding transcript.)
genome : 23,439,537 - 23,439,567 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0138986)
HIX0139182
HIT000451483
(
DQ584952
)
Representative transcript
(Non-protein coding transcript.)
genome : 23,439,909 - 23,439,937 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0139182)
HIX0027841
HIT000428263
(
AK309397
)
(Guanine nucleotide-binding protein G(z) subunit alpha; G(x) alpha chain; Gz-alpha;)
genome : 23,464,565 - 23,465,773 (1,209)
query : 1 - 825 (825/825)
2 exons
identity = 0.999
5'(0.997;1.000)3'
coverage = 1.000
InterPro :
IPR001019 : Guanine nucleotide binding protein (G-protein), alpha subunit
IPR001408 : G-protein alpha subunit, group I
GO :
0003924 : Molecular Function : GTPase activity
0004871 : Molecular Function : signal transducer activity
0005525 : Molecular Function : GTP binding
0006184 : Biological Process : GTP catabolic process
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007188 : Biological Process : adenylate cyclase-modulating G-protein coupled receptor signaling pathway
0019001 : Molecular Function : guanyl nucleotide binding
0031683 : Molecular Function : G-protein beta/gamma-subunit complex binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 11.5, extr 10, cyto_plas 9.66667,
nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027841)
HIX0027841
HIT000583628 (
ENST00000479571
)
(Guanine nucleotide-binding protein G(k) subunit alpha; G(i) alpha-3; Fragment;)
genome : 23,464,565 - 23,465,529 (965)
query : 1 - 581 (581/581)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 12.5, extr 10, cyto_plas 10,
nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027841)
HIX0016293
HIT000519147 (
ENST00000421213
)
(Rhabdoid tumor deletion region protein 1;)
genome : 23,466,414 - 23,476,261 (9,848)
query : 1 - 323 (323/323)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016293)
HIX0016293
HIT000536998 (
ENST00000439064
)
(Rhabdoid tumor deletion region protein 1;)
genome : 23,473,364 - 23,481,101 (7,738)
query : 1 - 695 (695/695)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 15.5, nucl 8, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016293)
HIX0016293
HIT000429193
(
AK310327
)
(Rhabdoid tumor deletion region protein 1;)
genome : 23,475,723 - 23,484,280 (8,558)
query : 1 - 1,108 (1,108/1,108)
4 exons
identity = 0.998
3'(1.000;1.000;0.992;1.000)5'
coverage = 1.000
InterPro :
IPR011989 : Armadillo-like helical
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto 10, cyto_nucl 9.5, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016293)
HIX0016293
HIT000494154
(
AK299530
)
(Rhabdoid tumor deletion region protein 1;)
genome : 23,475,789 - 23,484,259 (8,471)
query : 1 - 961 (961/972)
4 exons
identity = 0.990
3'(0.998;1.000;1.000;0.880)5'
coverage = 1.000
InterPro :
IPR011989 : Armadillo-like helical
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 13.3333, cyto_pero 9.5, nucl 8.5,
mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016293)
HIX0016293
HIT000550691 (
ENST00000452757
)
(Rhabdoid tumor deletion region protein 1;)
genome : 23,478,180 - 23,482,487 (4,308)
query : 1 - 509 (509/509)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 7, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016293)
HIX0016293
HIT000505759 (
ENST00000406876
)
(Rhabdoid tumor deletion region protein 1;)
genome : 23,478,385 - 23,487,208 (8,824)
query : 1 - 519 (519/519)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 12, extr 9, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016293)
HIX0203196
pHIT000036794 ( pHIT000036794 )
(Ras-related protein Rab-36;)
genome : 23,487,471 - 23,503,751 (16,281)
query : 1 - 1,287 (1,287/1,287)
11 exons
InterPro :
IPR001806 : Small GTPase superfamily
IPR003579 : Small GTPase superfamily, Rab type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
0015031 : Biological Process : protein transport
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203196)
CAGE tag :
H21BA63K0506
HIX0203196
pHIT000036795 ( pHIT000036795 )
(Ras-related protein Rab-36;)
genome : 23,487,471 - 23,503,751 (16,281)
query : 1 - 1,479 (1,479/1,479)
12 exons
InterPro :
IPR001806 : Small GTPase superfamily
IPR003579 : Small GTPase superfamily, Rab type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
0015031 : Biological Process : protein transport
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203196)
CAGE tag :
H08BA13F1506
HIX0203196
pHIT000096098 ( pHIT000096098 )
(Ras-related protein Rab-36;)
genome : 23,487,471 - 23,503,751 (16,281)
query : 1 - 1,359 (1,359/1,359)
12 exons
InterPro :
IPR001806 : Small GTPase superfamily
IPR003579 : Small GTPase superfamily, Rab type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
0015031 : Biological Process : protein transport
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203196)
CAGE tag :
H21BA63K0506
HIX0203196
pHIT000122427 ( pHIT000122427 )
(Ras-related protein Rab-36;)
genome : 23,487,471 - 23,503,751 (16,281)
query : 1 - 1,221 (1,221/1,221)
12 exons
InterPro :
IPR001806 : Small GTPase superfamily
IPR003579 : Small GTPase superfamily, Rab type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
0015031 : Biological Process : protein transport
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203196)
CAGE tag :
T22R014D7375
HIX0203196
HIT000108753 (
ENST00000263116
)
(Ras-related protein Rab-36;)
genome : 23,487,513 - 23,506,537 (19,025)
query : 1 - 3,828 (3,828/3,828)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, cyto_mito 10.5, nucl 6, extr 3, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203196)
HIX0203196
HIT000058760
(
AB023061
)
(Ras-related protein Rab-36;)
genome : 23,487,513 - 23,506,531 (19,019)
query : 1 - 3,822 (3,822/3,822)
11 exons
identity = 0.997
5'(0.991;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.992;0.998)3'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR003579 : Small GTPase superfamily, Rab type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
0015031 : Biological Process : protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, cyto_mito 10.5, nucl 6, extr 3, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203196)
HIX0203196
HIT000201641 (
NM_004914
)
(Ras-related protein Rab-36;)
genome : 23,487,513 - 23,506,531 (19,019)
query : 1 - 3,822 (3,822/3,822)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, cyto_mito 10.5, nucl 6, extr 3, pero 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203196)
HIX0203196
HIT000338077
(
BC104989
)
(Ras-related protein Rab-36;)
genome : 23,487,524 - 23,503,790 (16,267)
query : 1 - 1,070 (1,070/1,070)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR003579 : Small GTPase superfamily, Rab type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
0015031 : Biological Process : protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, cyto_mito 10.5, nucl 6, extr 3, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203196)
HIX0203196
HIT000338079
(
BC104991
)
(Ras-related protein Rab-36;)
genome : 23,487,524 - 23,503,783 (16,260)
query : 1 - 1,063 (1,063/1,063)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR003579 : Small GTPase superfamily, Rab type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
0015031 : Biological Process : protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, cyto_mito 10.5, nucl 6, extr 3, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203196)
HIX0203196
HIT000267487
(
CR456553
)
(Ras-related protein Rab-36;)
genome : 23,487,535 - 23,503,879 (16,345)
query : 1 - 1,149 (1,149/1,149)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.995)3'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR003579 : Small GTPase superfamily, Rab type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
0015031 : Biological Process : protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, cyto_mito 10.5, nucl 6, extr 3, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203196)
HIX0203196
HIT000070982
(
AF133588
)
Representative transcript
(Ras-related protein Rab-36;)
genome : 23,487,543 - 23,506,531 (18,989)
query : 1 - 3,725 (3,725/3,725)
12 exons
identity = 0.995
5'(0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.996;0.964)3'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR003579 : Small GTPase superfamily, Rab type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
0015031 : Biological Process : protein transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, cyto_mito 10.5, nucl 6, extr 3, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203196)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK038445
Danio
sp. (Zebrafish) : BC127570
Bos
sp. (Cow) : ENSBTAT00000017437
Macaca
sp. (Macaque) : ENSMMUT00000021320
Oryzias
sp. (Medaka) : ENSORLT00000003886
Pongo
sp. (Orangutan) : ENSPPYT00000013488
Tetraodon
sp. (Tetraodon) : GSTENT00030117001
Takifugu
sp. (Fugu) : SINFRUT00000178097
Rattus
sp. (Rat) : XM_001071587
Pan
sp. (Chimpanzee) : XM_001169301
Equus
sp. (Horse) : XM_001488489
Gallus
sp. (Chicken) : XM_415245
Canis
sp. (Dog) : XM_844451
HIX0203196
HIT000134619 (
ENST00000341989
)
(Ras-related protein Rab-36;)
genome : 23,487,553 - 23,503,751 (16,199)
query : 1 - 936 (936/936)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16.5, cyto_mito 10, extr 5, nucl 5, cyto 2.5,
extr_plas 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203196)
HIX0203196
HIT000251920
(
AY336745
)
(Ras-related protein Rab-36.)
genome : 23,487,553 - 23,503,751 (16,199)
query : 1 - 936 (936/936)
10 exons
identity = 0.999
5'(0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, nucl 5, cyto 3.5, cyto_pero 2.5, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203196)
HIX0203196
HIT000490676
(
AK296052
)
(Ras-related protein Rab-36.)
genome : 23,487,664 - 23,505,991 (18,328)
query : 1 - 1,321 (1,321/1,321)
6 exons
identity = 0.986
5'(1.000;1.000;1.000;0.940;1.000;0.954)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 9, cyto 4.5, cyto_pero 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203196)
HIX0203196
HIT000518829 (
ENST00000420895
)
(Ras-related protein Rab-36.)
genome : 23,492,300 - 23,498,498 (6,199)
query : 1 - 554 (554/554)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, cyto 8, E.R._mito 8, mito_pero 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203196)
HIX0027922
HIT000050917
(
BC027465
)
Representative transcript
(Ras-related protein Rab-36.)
genome : 23,502,123 - 23,503,394 (1,272)
query : 1 - 1,272 (1,272/1,286)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, extr 6, mito 3, extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027922)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : ENSMMUT00000021323
Pongo
sp. (Orangutan) : ENSPPYT00000013489
Pan
sp. (Chimpanzee) : ENSPTRT00000026407
HIX0203196
HIT000089292
(
BC017436
)
(PDZ and LIM domain protein 5 isoform i.)
genome : 23,504,750 - 23,505,803 (1,054)
query : 1 - 1,054 (1,054/1,170)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.923
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203196)
HIX0175408
HIT000705124 (
ENST00000593306
)
(Conserved hypothetical protein.)
genome : 23,522,058 - 23,522,465 (408)
query : 1 - 339 (339/339)
2 exons
identity = 0.960
3'(0.955;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 13.5, cyto 7, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175408)
HIX0175408
HIT000509971 (
ENST00000412037
)
(Conserved hypothetical protein.)
genome : 23,522,105 - 23,522,359 (255)
query : 1 - 255 (255/255)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 7.5, cyto_nucl 6.83333, cyto 5,
cyto_pero 3.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175408)
HIX0175465
HIT000196129
(
M64437
)
(Hypothetical protein.)
genome : 23,522,397 - 23,523,159 (763)
query : 1 - 763 (763/763)
1 exon
identity = 0.983
5'(0.983)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 12.8333, mito 8, cyto 4,
E.R._mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175465)
HIX0175465
HIT000321188
(
X06418
)
(Breakpoint cluster region protein; EC=2.7.11.1; Renal carcinoma antigen NY-REN-26;)
genome : 23,523,105 - 23,524,426 (1,322)
query : 1 - 1,322 (1,322/1,365)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 0.968
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR015123 : Bcr-Abl oncoprotein oligomerisation
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0005096 : Molecular Function : GTPase activator activity
0006468 : Biological Process : protein phosphorylation
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 17, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175465)
HIX0175465
HIT000484742
(
EU216063
)
(Breakpoint cluster region protein; EC=2.7.11.1; Renal carcinoma antigen NY-REN-26;)
genome : 23,523,148 - 23,524,429 (1,282)
query : 1 - 1,282 (1,282/1,326)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 0.967
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR015123 : Bcr-Abl oncoprotein oligomerisation
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0005096 : Molecular Function : GTPase activator activity
0006468 : Biological Process : protein phosphorylation
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto_nucl 17.5, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175465)
HIX0175465
HIT000484737
(
EU216058
)
(Breakpoint cluster region protein; EC=2.7.11.1; Renal carcinoma antigen NY-REN-26;)
genome : 23,523,148 - 23,524,429 (1,282)
query : 1 - 1,282 (1,282/1,290)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 0.994
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR015123 : Bcr-Abl oncoprotein oligomerisation
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0005096 : Molecular Function : GTPase activator activity
0006468 : Biological Process : protein phosphorylation
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto_nucl 18.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175465)
HIX0175465
HIT000484751
(
EU216072
)
(Breakpoint cluster region protein; EC=2.7.11.1; Renal carcinoma antigen NY-REN-26;)
genome : 23,523,148 - 23,524,360 (1,213)
query : 1 - 1,213 (1,213/1,221)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 0.993
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR015123 : Bcr-Abl oncoprotein oligomerisation
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0005096 : Molecular Function : GTPase activator activity
0006468 : Biological Process : protein phosphorylation
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 18, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175465)
HIX0175465
HIT000194547
(
M17542
)
(Non-protein coding transcript.)
genome : 23,524,396 - 23,596,017 (71,622)
query : 1 - 63 (63/63)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175465)
HIX0175465
HIT000321447
(
X14677
)
(Hypothetical protein.)
genome : 23,540,440 - 23,596,020 (55,581)
query : 1 - 168 (168/168)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 3.5, cyto_nucl 2.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175465)
HIX0175465
HIT000568549 (
ENST00000463770
)
(Hypothetical protein.)
genome : 23,540,440 - 23,596,020 (55,581)
query : 1 - 168 (168/168)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 3.5, cyto_nucl 2.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175465)
HIX0175465
HIT000321445
(
X14675
)
Representative transcript
(Hypothetical protein.)
genome : 23,540,519 - 23,596,020 (55,502)
query : 1 - 231 (231/231)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 10.5, nucl 10, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175465)
HIX0175465
HIT000591375 (
ENST00000487679
)
(Hypothetical protein.)
genome : 23,540,519 - 23,596,020 (55,502)
query : 1 - 231 (231/231)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 10.5, nucl 10, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175465)
HIX0097168
HIT000389400
(
BC127773
)
Representative transcript
(Hypothetical short protein.)
genome : 23,587,587 - 23,587,990 (404)
query : 11 - 414 (404/425)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 0.951
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0097168)
HIX0175465
HIT000584960 (
ENST00000480973
)
(Breakpoint cluster region protein; EC=2.7.11.1; Renal carcinoma antigen NY-REN-26;)
genome : 23,593,219 - 23,603,580 (10,362)
query : 1 - 535 (535/535)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 8.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175465)
HIX0213277
HIT000658819 (
NR_033408
)
(F-box/WD repeat-containing protein 4; Dactylin; F-box and WD-40 domain-containing protein 4;)
genome : 23,604,954 - 23,607,185 (2,232)
query : 1 - 2,232 (2,232/2,256)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213277)
HIX0213277
HIT000072615
(
AF174606
)
Representative transcript
(F-box/WD repeat-containing protein 4; Dactylin; F-box and WD-40 domain-containing protein 4;)
genome : 23,604,954 - 23,606,546 (1,593)
query : 1 - 1,590 (1,590/1,590)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR001810 : F-box domain
IPR017986 : WD40-repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 14, cyto 10, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213277)
Ortholog candidate ( ->
Evola
)
Takifugu
sp. (Fugu) : SINFRUT00000165496
HIX0213277
HIT000433041
(
AK314175
)
(WD40-repeat-containing domain containing protein.)
genome : 23,605,092 - 23,606,546 (1,455)
query : 1 - 1,456 (1,456/1,456)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213277)
HIX0213277
HIT000524655 (
ENST00000426721
)
(F-box/WD repeat-containing protein 4; Dactylin; F-box and WD-40 domain-containing protein 4;)
genome : 23,605,323 - 23,606,541 (1,219)
query : 1 - 1,219 (1,219/1,219)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213277)
HIX0159167
HIT000591641 (
ENST00000487968
)
(Pleckstrin homology domain containing protein.)
genome : 23,625,396 - 23,633,318 (7,923)
query : 1 - 2,870 (2,870/2,870)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 13, nucl 9, extr 4, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159167)
HIX0159167
HIT000570747 (
ENST00000466076
)
(Conserved hypothetical protein.)
genome : 23,625,975 - 23,627,401 (1,427)
query : 1 - 494 (494/495)
2 exons
identity = 0.990
5'(1.000;0.973)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 13, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159167)
HIX0159167
HIT000077410
(
AF321981
)
(Breakpoint cluster region protein; EC=2.7.11.1; Renal carcinoma antigen NY-REN-26;)
genome : 23,631,731 - 23,634,816 (3,086)
query : 1 - 232 (232/250)
3 exons
identity = 0.959
5'(1.000;0.867;1.000)3'
coverage = 0.928
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 9.5, cyto_nucl 8.5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159167)
HIX0159167
HIT000517656 (
ENST00000419722
)
(C2 domain containing protein.)
genome : 23,634,726 - 23,652,620 (17,895)
query : 6 - 788 (783/788)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12, nucl 11, cyto 11, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159167)
HIX0159167
HIT000575880 (
ENST00000471452
)
(Conserved hypothetical protein.)
genome : 23,637,228 - 23,645,050 (7,823)
query : 1 - 638 (638/638)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 11, extr 10, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159167)
HIX0159167
HIT000583062 (
ENST00000478978
)
(Conserved hypothetical protein.)
genome : 23,648,341 - 23,652,620 (4,280)
query : 1 - 463 (463/463)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 16.5, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159167)
HIX0159167
HIT000579291 (
ENST00000475025
)
(Rho GTPase-activating protein domain containing protein.)
genome : 23,648,932 - 23,656,186 (7,255)
query : 1 - 563 (563/563)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 11, mito 7, nucl 4.5,
mito_pero 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159167)
HIX0159167
HIT000042715
(
AK122842
)
Representative transcript
(Putative uncharacterized protein DKFZp434K191;)
genome : 23,651,661 - 23,660,221 (8,561)
query : 1 - 4,188 (4,188/4,232)
6 exons
identity = 0.994
5'(1.000;0.987;0.970;1.000;1.000;0.993)3'
coverage = 1.000
InterPro :
IPR000198 : Rho GTPase-activating protein domain
IPR008936 : Rho GTPase activation protein
GO :
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, nucl 5, plas 4, extr 4, pero 4, extr_plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159167)
HIX0159167
HIT000534924 (
ENST00000436990
)
(Conserved hypothetical protein.)
genome : 23,651,661 - 23,660,221 (8,561)
query : 1 - 4,188 (4,188/4,188)
6 exons
identity = 0.998
5'(1.000;0.987;0.970;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 6.5, cyto_nucl 6, cyto 4.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159167)
HIX0159167
HIT000092404
(
BC031568
)
(Breakpoint cluster region protein; EC=2.7.11.1; Renal carcinoma antigen NY-REN-26;)
genome : 23,652,512 - 23,658,137 (5,626)
query : 1 - 1,171 (1,171/1,215)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000198 : Rho GTPase-activating protein domain
IPR008936 : Rho GTPase activation protein
GO :
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, cyto_nucl 9, mito 6, pero 6, mito_pero 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159167)
HIX0175494
HIT000454576_09
(
DQ588045
)
Representative transcript
(Non-protein coding transcript.)
genome : 23,653,890 - 23,653,919 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175494)
HIX0159167
HIT000044183
(
AK124310
)
(Rho GTPase-activating protein domain containing protein.)
genome : 23,654,410 - 23,657,243 (2,834)
query : 3 - 2,836 (2,834/2,836)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 0.999
InterPro :
IPR000198 : Rho GTPase-activating protein domain
IPR008936 : Rho GTPase activation protein
GO :
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 10, cyto_nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159167)
HIX0159167
HIT000555990 (
ENST00000458056
)
(Rho GTPase-activating protein domain containing protein.)
genome : 23,654,575 - 23,656,882 (2,308)
query : 1 - 778 (778/778)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 15.5, extr 7, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159167)
HIX0159167
HIT000261073
(
BC063619
)
(Conserved hypothetical protein.)
genome : 23,658,668 - 23,660,224 (1,557)
query : 1 - 1,558 (1,558/1,573)
1 exon
identity = 0.987
5'(0.987)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 6.5, cyto_nucl 6, cyto 4.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159167)
HIX0159167
HIT000266032_04
(
BC083493
)
(Hypothetical protein.)
genome : 23,658,727 - 23,660,221 (1,495)
query : 1 - 1,497 (1,497/1,511)
1 exon
identity = 0.987
5'(0.987)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 6.5, cyto_nucl 6, cyto 4.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159167)
HIX0159167
HIT000096846
(
BC041705
)
(Conserved hypothetical protein.)
genome : 23,658,817 - 23,660,224 (1,408)
query : 1 - 1,410 (1,410/1,526)
1 exon
identity = 0.987
5'(0.987)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159167)
HIX0159167
HIT000389296
(
BC127668
)
(Non-protein coding transcript.)
genome : 23,659,002 - 23,659,277 (276)
query : 10 - 285 (276/299)
1 exon
identity = 0.993
5'(0.993)3'
coverage = 0.923
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159167)
HIX0159167
HIT000259326
(
BC053641
)
(Conserved hypothetical protein.)
genome : 23,659,007 - 23,660,224 (1,218)
query : 1 - 1,220 (1,220/1,329)
1 exon
identity = 0.990
5'(0.990)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0159167)
HIX0139477
HIT000538536 (
ENST00000440602
)
(Conserved hypothetical protein.)
genome : 23,664,730 - 23,665,114 (385)
query : 1 - 385 (385/385)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, mito 13, nucl 1, cyto 1, cyto_nucl 1, pero 1,
golg 1, cyto_pero 1, cyto_golg 1
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0139477)
HIX0175794
HIT000548710 (
ENST00000450776
)
(Hypothetical short protein.)
genome : 23,668,803 - 23,670,680 (1,878)
query : 1 - 346 (346/346)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 21, cyto 6, cyto_nucl 6, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175794)
HIX0115823
HIT000483393 (
ENST00000400418
)
(Carboxylesterase, type B domain containing protein.)
genome : 23,701,790 - 23,719,201 (17,412)
query : 1 - 859 (859/859)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 13.5, nucl 8.5, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0115823)
HIX0115823
HIT000660002 (
NR_037839
)
(Carboxylesterase, type B domain containing protein.)
genome : 23,701,793 - 23,724,313 (22,521)
query : 1 - 880 (880/880)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 15.5, nucl 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0115823)
HIX0115823
HIT000641555 (
ENST00000542510
)
(Carboxylesterase, type B domain containing protein.)
genome : 23,701,797 - 23,724,313 (22,517)
query : 1 - 1,016 (1,016/1,016)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 13, nucl 8.5, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0115823)
HIX0115823
HIT000520085 (
ENST00000422151
)
(Carboxylesterase, type B domain containing protein.)
genome : 23,708,489 - 23,715,942 (7,454)
query : 10 - 357 (348/357)
3 exons
identity = 0.994
3'(1.000;1.000;0.984)5'
coverage = 0.975
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, extr 3, nucl 3, mito 3, mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0115823)
HIX0115823
HIT000513048 (
ENST00000415114
)
(Carboxylesterase, type B domain containing protein.)
genome : 23,712,282 - 23,729,918 (17,637)
query : 1 - 974 (974/974)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 16, nucl 7.5, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0115823)
HIX0115823
HIT000529171 (
ENST00000431237
)
(Carboxylesterase, type B domain containing protein.)
genome : 23,712,282 - 23,722,939 (10,658)
query : 1 - 649 (649/649)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, nucl 10, cyto 9, extr 8, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0115823)
HIX0115823
HIT000521963 (
ENST00000424029
)
(Carboxylesterase, type B domain containing protein.)
genome : 23,715,835 - 23,719,258 (3,424)
query : 1 - 292 (292/292)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 14.5, mito 7, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0115823)
HIX0016295
HIT000486446 (
NR_003950
)
(Probable palmitoyltransferase ZDHHC8; EC=2.3.1.-; Zinc finger DHHC domain-containing protein 8; DHHC-8; Zinc finger protein 378;)
genome : 23,732,792 - 23,744,799 (12,008)
query : 1 - 2,548 (2,548/2,548)
6 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.3.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto_nucl 4.66667, nucl 4.5, extr 4,
cyto 3.5, cyto_pero 3.33333
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016295)
HIX0016295
HIT000531102 (
ENST00000433168
)
(Probable palmitoyltransferase ZDHHC8; EC=2.3.1.-; Zinc finger DHHC domain-containing protein 8; DHHC-8; Zinc finger protein 378;)
genome : 23,732,793 - 23,744,913 (12,121)
query : 1 - 2,309 (2,309/2,309)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.3.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, extr 8, cyto_nucl 4.16667, nucl 3.5,
cyto 3.5, cyto_pero 3.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016295)
HIX0016295
HIT000017397
(
AK092530
)
(Probable palmitoyltransferase ZDHHC8; EC=2.3.1.-; Zinc finger DHHC domain-containing protein 8; DHHC-8;)
genome : 23,732,793 - 23,744,754 (11,962)
query : 1 - 2,374 (2,374/2,374)
5 exons
identity = 0.985
3'(0.973;0.996;1.000;1.000;0.995)5'
coverage = 1.000
EC number :
EC 2.3.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, extr 8, cyto_nucl 4.16667, nucl 3.5,
cyto 3.5, cyto_pero 3.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016295)
HIX0016295
HIT000106867 (
ENST00000255890
)
(Probable palmitoyltransferase ZDHHC8; EC=2.3.1.-; Zinc finger DHHC domain-containing protein 8; DHHC-8; Zinc finger protein 378;)
genome : 23,732,793 - 23,744,754 (11,962)
query : 1 - 2,382 (2,382/2,382)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.3.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, extr 8, cyto_nucl 4.16667, nucl 3.5,
cyto 3.5, cyto_pero 3.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016295)
HIX0016295
HIT000017448
(
AK092581
)
(Conserved hypothetical protein.)
genome : 23,732,793 - 23,744,742 (11,950)
query : 1 - 2,136 (2,136/2,136)
3 exons
identity = 0.997
3'(0.996;0.999;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016295)
HIX0016295
HIT000338308
(
BC105936
)
(Probable palmitoyltransferase ZDHHC8; EC=2.3.1.-; Zinc finger DHHC domain-containing protein 8; DHHC-8;)
genome : 23,733,324 - 23,742,717 (9,394)
query : 1 - 1,353 (1,353/1,353)
2 exons
identity = 0.980
3'(0.958;0.997)5'
coverage = 1.000
EC number :
EC 2.3.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, extr 8, cyto_nucl 4.16667, nucl 3.5,
cyto 3.5, cyto_pero 3.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016295)
HIX0016295
HIT000338309
(
BC105937
)
(Probable palmitoyltransferase ZDHHC8; EC=2.3.1.-; Zinc finger DHHC domain-containing protein 8; DHHC-8;)
genome : 23,733,324 - 23,742,717 (9,394)
query : 1 - 1,353 (1,353/1,353)
2 exons
identity = 0.980
3'(0.958;0.997)5'
coverage = 1.000
EC number :
EC 2.3.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, extr 8, cyto_nucl 4.16667, nucl 3.5,
cyto 3.5, cyto_pero 3.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016295)
HIX0016295
HIT000338806
(
BC107600
)
(Conserved hypothetical protein.)
genome : 23,733,324 - 23,742,717 (9,394)
query : 1 - 1,353 (1,353/1,353)
2 exons
identity = 0.981
3'(0.958;0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016295)
HIX0016295
HIT000260844
(
BC063382
)
(Conserved hypothetical protein.)
genome : 23,733,563 - 23,742,497 (8,935)
query : 1 - 1,139 (1,139/1,156)
4 exons
identity = 0.998
3'(0.997;1.000;0.992;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016295)
HIX0016295
HIT000518902 (
ENST00000420968
)
(Probable palmitoyltransferase ZDHHC8; EC=2.3.1.-; Zinc finger DHHC domain-containing protein 8; DHHC-8; Zinc finger protein 378;)
genome : 23,733,564 - 23,744,759 (11,196)
query : 1 - 1,736 (1,736/1,736)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.3.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto_nucl 4.66667, nucl 4.5, extr 4,
cyto 3.5, cyto_pero 3.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016295)
HIX0016295
HIT000012744
(
AK056130
)
Representative transcript
(Probable palmitoyltransferase ZDHHC8; EC=2.3.1.-; Zinc finger DHHC domain-containing protein 8; DHHC-8; Zinc finger protein 378;)
genome : 23,733,564 - 23,744,730 (11,167)
query : 3 - 1,709 (1,707/1,709)
6 exons
identity = 0.998
3'(0.997;0.991;0.992;0.999;1.000;1.000)5'
coverage = 0.999
EC number :
EC 2.3.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016295)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : ENSPTRT00000026424
HIX0016295
HIT000554213 (
ENST00000456279
)
(Conserved hypothetical protein.)
genome : 23,734,772 - 23,741,795 (7,024)
query : 1 - 435 (435/435)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, nucl 10.5, cyto 9.5, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016295)
HIX0175755
HIT000612592 (
ENST00000512987
)
(Conserved hypothetical protein.)
genome : 23,734,958 - 23,736,026 (1,069)
query : 1 - 629 (629/629)
5 exons
identity = 0.984
5'(1.000;1.000;0.952;0.927;0.984)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12.5, cyto_mito 10.1667, cyto_nucl 8, nucl 6.5,
extr 6, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175755)
HIX0016295
HIT000516198 (
ENST00000418264
)
(Probable palmitoyltransferase ZDHHC8; EC=2.3.1.-; Zinc finger DHHC domain-containing protein 8; DHHC-8; Zinc finger protein 378;)
genome : 23,740,125 - 23,744,344 (4,220)
query : 1 - 1,403 (1,403/1,403)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.3.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, nucl 4.5, cyto_nucl 4.16667, extr 3,
cyto_pero 2.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0016295)
HIX0175427
HIT000547645 (
ENST00000449711
)
(Hypothetical short protein.)
genome : 23,775,751 - 23,777,258 (1,508)
query : 1 - 917 (917/917)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175427)
HIX0175427
HIT000526349 (
ENST00000428415
)
(Hypothetical short protein.)
genome : 23,776,358 - 23,776,918 (561)
query : 1 - 337 (337/337)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175427)
HIX0197222
HIT000552202 (
ENST00000454268
)
(Conserved hypothetical protein.)
genome : 23,788,785 - 23,802,975 (14,191)
query : 1 - 641 (641/641)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 11.5, extr 9, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0197222)
HIX0197222
HIT000599862_02 (
ENST00000496548
)
(Hypothetical protein.)
genome : 23,788,785 - 23,802,972 (14,188)
query : 1 - 639 (639/639)
2 exons
identity = 0.970
5'(0.971;0.970)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, extr 12, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0197222)
HIX0197222
HIT000555127 (
ENST00000457193
)
(Conserved hypothetical protein.)
genome : 23,800,566 - 23,803,020 (2,455)
query : 1 - 586 (586/586)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, extr 13, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0197222)
HIX0197222
HIT000581329_02 (
ENST00000477172
)
(Hypothetical protein.)
genome : 23,801,247 - 23,802,951 (1,705)
query : 1 - 454 (454/454)
2 exons
identity = 0.967
5'(0.951;0.969)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 9.5, cyto_nucl 8.83333, cyto 5,
cyto_pero 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0197222)
HIX0197222
HIT000572943_02 (
ENST00000468372
)
(Hypothetical protein.)
genome : 23,801,661 - 23,802,972 (1,312)
query : 1 - 533 (533/533)
2 exons
identity = 0.970
5'(0.970;0.970)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, extr 11, nucl 10.5, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0197222)
HIX0197222
HIT000523958 (
ENST00000426024
)
(Spindle assembly checkpoint component Mad1 family protein.)
genome : 23,802,536 - 23,802,698 (163)
query : 1 - 163 (163/163)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 15, cyto 8, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0197222)
HIX0027924
HIT000051844
(
BC036910
)
Representative transcript
(Ret-finger protein-like 3 antisense family protein.)
genome : 23,804,273 - 23,829,167 (24,895)
query : 1 - 1,598 (1,598/1,626)
12 exons
identity = 0.986
3'(0.966;1.000;0.993;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR019524 : Ret-finger protein-like 3 antisense
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, extr 9, cyto_nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027924)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000013933
Pan
sp. (Chimpanzee) : ENSPTRT00000026426
HIX0027924
HIT000122401 (
ENST00000320372
)
(Ret-finger protein-like 3 antisense family protein.)
genome : 23,804,273 - 23,829,167 (24,895)
query : 1 - 1,578 (1,578/1,578)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, extr 9, cyto_nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027924)
HIX0027924
HIT000638505 (
ENST00000539460
)
(Ret-finger protein-like 3 antisense family protein.)
genome : 23,812,181 - 23,829,093 (16,913)
query : 1 - 720 (720/720)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, extr 9, cyto_nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027924)
HIX0227302
HIT000530183 (
ENST00000432249
)
(Hypothetical short protein.)
genome : 23,854,681 - 23,855,789 (1,109)
query : 1 - 477 (477/477)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0227302)
HIX0175439
HIT000556252 (
ENST00000458318
)
(Conserved hypothetical protein.)
genome : 23,909,251 - 23,915,694 (6,444)
query : 1 - 433 (433/433)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 11, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175439)
HIX0175439
HIT000552797 (
ENST00000454863
)
(Hypothetical short protein.)
genome : 23,909,251 - 23,915,309 (6,059)
query : 1 - 569 (569/569)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, mito 6, nucl 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175439)
HIX0213273
HIT000207715 (
NM_020070
)
(Conserved hypothetical protein.)
genome : 23,915,314 - 23,922,495 (7,182)
query : 1 - 899 (899/915)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, nucl 16, cyto 12
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213273)
HIX0213273
HIT000214064 (
NM_152855
)
(Conserved hypothetical protein.)
genome : 23,915,314 - 23,922,495 (7,182)
query : 1 - 783 (783/799)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 17, nucl 14.5, cyto 14.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213273)
HIX0213273
HIT000092095
(
BC030239
)
(Immunoglobulin lambda-like polypeptide 1; CD179 antigen-like family member B; Ig lambda-5; Immunoglobulin omega polypeptide; Immunoglobulin-related protein 14.1; AltName: CD_antigen=CD179b; Precursor;)
genome : 23,915,314 - 23,922,438 (7,125)
query : 1 - 725 (725/741)
2 exons
identity = 0.994
3'(1.000;0.985)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 17, nucl 14.5, cyto 14.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213273)
HIX0213273
HIT000035743
(
BC012293
)
(Immunoglobulin lambda-like polypeptide 1; CD179 antigen-like family member B; Ig lambda-5; Immunoglobulin omega polypeptide; Immunoglobulin-related protein 14.1; AltName: CD_antigen=CD179b; Precursor;)
genome : 23,915,314 - 23,922,435 (7,122)
query : 1 - 839 (839/853)
3 exons
identity = 0.999
3'(0.998;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, nucl 16, cyto 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213273)
HIX0213273
HIT000126643 (
ENST00000330377
)
(Conserved hypothetical protein.)
genome : 23,915,312 - 23,922,495 (7,184)
query : 1 - 901 (901/901)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, nucl 16, cyto 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213273)
HIX0213273
HIT000105925 (
ENST00000249053
)
(Conserved hypothetical protein.)
genome : 23,915,312 - 23,922,426 (7,115)
query : 1 - 716 (716/716)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 17, nucl 14.5, cyto 14.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213273)
HIX0213273
HIT000195187
(
M27749
)
Representative transcript
(Immunoglobulin lambda-like polypeptide 1; CD179 antigen-like family member B; Ig lambda-5; Immunoglobulin omega polypeptide; Immunoglobulin-related protein 14.1; AltName: CD_antigen=CD179b; Precursor;)
genome : 23,915,364 - 23,922,495 (7,132)
query : 1 - 847 (847/847)
3 exons
identity = 0.996
3'(0.993;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, nucl 16, cyto 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213273)
HIX0213273
HIT000450945
(
DQ584414
)
(Non-protein coding transcript.)
genome : 23,915,486 - 23,915,515 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213273)
HIX0213273
HIT000536637 (
ENST00000438703
)
(Conserved hypothetical protein.)
genome : 23,915,556 - 23,922,489 (6,934)
query : 1 - 654 (654/654)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18, nucl 16, cyto 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213273)
HIX0213273
HIT000440678
(
DQ574147
)
(Non-protein coding transcript.)
genome : 23,915,688 - 23,915,718 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213273)
HIX0213273
HIT000440676
(
DQ574145
)
(Non-protein coding transcript.)
genome : 23,915,691 - 23,915,718 (28)
query : 1 - 28 (28/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.933
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213273)
HIX0213273
HIT000440677
(
DQ574146
)
(Non-protein coding transcript.)
genome : 23,915,689 - 23,915,718 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213273)
HIX0213273
HIT000440679
(
DQ574148
)
(Non-protein coding transcript.)
genome : 23,915,690 - 23,915,718 (29)
query : 1 - 29 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213273)
HIX0213270
HIT000206145 (
NM_016449
)
(Uncharacterized protein C22orf43;)
genome : 23,950,639 - 23,974,508 (23,870)
query : 1 - 1,300 (1,300/1,336)
10 exons
identity = 0.975
3'(1.000;1.000;1.000;1.000;0.876;1.000;1.000;
1.000;0.802;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 10.8333, nucl 10, cyto 9.5,
cyto_pero 5.66667
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213270)
HIX0213270
HIT000259613
(
BC056888
)
Representative transcript
(Uncharacterized protein C22orf43;)
genome : 23,950,639 - 23,974,487 (23,849)
query : 1 - 1,279 (1,279/1,315)
10 exons
identity = 0.974
3'(1.000;1.000;1.000;1.000;0.876;1.000;1.000;
1.000;0.802;0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 10.8333, nucl 10, cyto 9.5,
cyto_pero 5.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213270)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : ENSMMUT00000044156
Pongo
sp. (Orangutan) : ENSPPYT00000013932
Pan
sp. (Chimpanzee) : ENSPTRT00000026429
HIX0213270
HIT000121420 (
ENST00000317749
)
(Uncharacterized protein C22orf43;)
genome : 23,950,639 - 23,974,508 (23,870)
query : 1 - 1,300 (1,300/1,300)
10 exons
identity = 0.975
3'(1.000;1.000;1.000;1.000;0.876;1.000;1.000;
1.000;0.802;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 10.8333, nucl 10, cyto 9.5,
cyto_pero 5.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213270)
HIX0213270
HIT000267304
(
CR456370
)
(Uncharacterized protein C22orf43;)
genome : 23,950,819 - 23,974,235 (23,417)
query : 1 - 844 (844/844)
10 exons
identity = 0.958
3'(1.000;1.000;1.000;1.000;0.876;1.000;1.000;
0.965;0.802;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 10.8333, nucl 10, cyto 9.5,
cyto_pero 5.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213270)
HIX0213270
HIT000429215
(
AK310349
)
(Uncharacterized protein C22orf43;)
genome : 23,958,267 - 23,974,508 (16,242)
query : 1 - 1,609 (1,609/1,609)
7 exons
identity = 0.984
3'(1.000;1.000;1.000;1.000;0.965;0.802;0.994)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 5.66667, cyto 5.5, nucl 4.5,
cyto_pero 4.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213270)
HIX0213270
HIT000024318
(
AL080197
)
(Uncharacterized protein C22orf43;)
genome : 23,969,276 - 23,974,488 (5,213)
query : 1 - 925 (925/937)
2 exons
identity = 0.997
3'(0.933;0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 10.5, cyto_nucl 9.83333, cyto 8,
cyto_pero 4.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213270)
HIX0213270
HIT000260851
(
BC063390
)
(Uncharacterized protein C22orf43;)
genome : 23,972,688 - 23,974,497 (1,810)
query : 1 - 1,812 (1,812/1,837)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 10.5, cyto_nucl 9.83333, cyto 8,
cyto_pero 4.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213270)
HIX0213270
HIT000565109 (
ENST00000460169
)
(Uncharacterized protein C22orf43;)
genome : 23,972,805 - 23,974,098 (1,294)
query : 1 - 441 (441/441)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 12, cyto_nucl 4, nucl 3, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213270)
HIX0021874
HIT000306095
(
CR627178
)
(Immunoglobulin lambda-like polypeptide 1; CD179 antigen-like family member B; Ig lambda-5; Immunoglobulin omega polypeptide; Immunoglobulin-related protein 14.1; AltName: CD_antigen=CD179b; Precursor;)
genome : 23,975,532 - 23,981,557 (6,026)
query : 1 - 6,023 (6,023/6,056)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 14.5, nucl 9, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021874)
HIX0021874
HIT000260752
(
BC063045
)
(Immunoglobulin lambda-like polypeptide 1; CD179 antigen-like family member B; Ig lambda-5; Immunoglobulin omega polypeptide; Immunoglobulin-related protein 14.1; AltName: CD_antigen=CD179b; Precursor;)
genome : 23,980,676 - 24,059,506 (78,831)
query : 1 - 1,658 (1,658/1,700)
10 exons
identity = 0.995
3'(0.993;1.000;1.000;0.992;1.000;1.000;0.942;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR006104 : Glycosyl hydrolases family 2, sugar binding domain
IPR008979 : Galactose-binding domain-like
GO :
0004553 : Molecular Function : hydrolase activity, hydrolyzing O-glycosyl compounds
0005975 : Biological Process : carbohydrate metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 11, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021874)
HIX0021874
HIT000562626 (
NR_024448
)
(Beta-glucuronidase; EC=3.2.1.31; Beta-G1; Precursor;)
genome : 23,980,676 - 24,059,610 (78,935)
query : 1 - 3,415 (3,415/3,442)
12 exons
identity = 0.998
3'(1.000;1.000;1.000;0.968;1.000;1.000;1.000;
1.000;0.953;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.31
KEGG pathway :
00040 : Pentose and glucuronate interconversions (57)
00500 : Starch and sucrose metabolism (71)
00531 : Glycosaminoglycan degradation (15)
00860 : Porphyrin and chlorophyll metabolism (72)
00944 : Flavone and flavonol biosynthesis (31)
00983 : Drug metabolism - other enzymes (20)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto 12, extr 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021874)
HIX0021874
HIT000099176
(
BC050388
)
(Beta-glucuronidase; EC=3.2.1.31; Beta-G1; Precursor;)
genome : 23,980,676 - 24,059,508 (78,833)
query : 1 - 3,229 (3,229/3,256)
12 exons
identity = 0.996
3'(0.998;1.000;1.000;1.000;0.968;0.998;0.991;
1.000;0.953;1.000;1.000;0.995)5'
coverage = 1.000
EC number :
EC 3.2.1.31
KEGG pathway :
00040 : Pentose and glucuronate interconversions (57)
00500 : Starch and sucrose metabolism (71)
00531 : Glycosaminoglycan degradation (15)
00860 : Porphyrin and chlorophyll metabolism (72)
00944 : Flavone and flavonol biosynthesis (31)
00983 : Drug metabolism - other enzymes (20)
01100 : Metabolic pathways (1346)
InterPro :
IPR006103 : Glycoside hydrolase, family 2, TIM barrel
GO :
0004553 : Molecular Function : hydrolase activity, hydrolyzing O-glycosyl compounds
0005975 : Biological Process : carbohydrate metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, nucl 13.5, cyto 10.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021874)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : XR_027947
HIX0021874
HIT000333966
(
BC033757
)
(Immunoglobulin lambda-like polypeptide 5; G lambda-1; Germline immunoglobulin lambda 1; Precursor;)
genome : 23,980,678 - 24,059,496 (78,819)
query : 1 - 2,001 (2,001/2,030)
10 exons
identity = 0.994
3'(0.993;1.000;1.000;0.991;1.000;1.000;0.942;
0.994;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto 10, extr 5, cyto_mito 5, cyto_pero 5,
cyto_golg 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021874)
HIX0021874
HIT000520440 (
ENST00000422506
)
(Immunoglobulin lambda-like polypeptide 5; G lambda-1; Germline immunoglobulin lambda 1; Precursor;)
genome : 23,980,674 - 24,059,543 (78,870)
query : 1 - 2,055 (2,055/2,055)
10 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.953;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 13.5, nucl 8, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021874)
HIX0021874
HIT000543616 (
ENST00000445682
)
(Beta-glucuronidase; EC=3.2.1.31; Beta-G1; Precursor;)
genome : 23,980,674 - 24,059,543 (78,870)
query : 1 - 3,350 (3,350/3,350)
12 exons
identity = 0.998
3'(1.000;1.000;1.000;0.968;1.000;1.000;1.000;
1.000;0.953;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.31
KEGG pathway :
00040 : Pentose and glucuronate interconversions (57)
00500 : Starch and sucrose metabolism (71)
00531 : Glycosaminoglycan degradation (15)
00860 : Porphyrin and chlorophyll metabolism (72)
00944 : Flavone and flavonol biosynthesis (31)
00983 : Drug metabolism - other enzymes (20)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 13.5, nucl 8, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021874)
HIX0021874
HIT000549771 (
ENST00000451837
)
(Beta-glucuronidase; EC=3.2.1.31; Beta-G1; Precursor;)
genome : 23,980,674 - 24,059,508 (78,835)
query : 1 - 3,234 (3,234/3,234)
12 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;0.968;1.000;1.000;
1.000;0.953;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.31
KEGG pathway :
00040 : Pentose and glucuronate interconversions (57)
00500 : Starch and sucrose metabolism (71)
00531 : Glycosaminoglycan degradation (15)
00860 : Porphyrin and chlorophyll metabolism (72)
00944 : Flavone and flavonol biosynthesis (31)
00983 : Drug metabolism - other enzymes (20)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, nucl 13.5, cyto 10.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021874)
HIX0021874
HIT000550671 (
ENST00000452737
)
(Immunoglobulin lambda-like polypeptide 1; CD179 antigen-like family member B; Ig lambda-5; Immunoglobulin omega polypeptide; Immunoglobulin-related protein 14.1; AltName: CD_antigen=CD179b; Precursor;)
genome : 23,980,674 - 24,059,508 (78,835)
query : 1 - 1,662 (1,662/1,662)
10 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.953;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 10, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021874)
HIX0021874
HIT000553419 (
ENST00000455485
)
(Ral-GDS-related protein; hRGR; Ral guanine nucleotide dissociation stimulator-like 4; RalGDS-like 4;)
genome : 23,980,674 - 24,035,338 (54,665)
query : 1 - 3,816 (3,816/3,816)
5 exons
identity = 0.997
3'(1.000;1.000;1.000;0.965;0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 13.5, nucl 8, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021874)
HIX0021874
HIT000528291 (
ENST00000430357
)
(Ig lambda-6 chain C region;)
genome : 23,980,674 - 23,995,073 (14,400)
query : 1 - 696 (696/696)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 7, cyto 2, mito 2, lyso 2, cyto_mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021874)
HIX0021874
HIT000045681
(
AK125808
)
(Ral-GDS-related protein; hRGR; Ral guanine nucleotide dissociation stimulator-like 4; RalGDS-like 4;)
genome : 23,980,677 - 24,035,338 (54,662)
query : 2 - 3,814 (3,813/3,814)
5 exons
identity = 0.996
3'(1.000;1.000;1.000;0.965;0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 13.5, nucl 8, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021874)
HIX0021874
HIT000013489
(
AK056875
)
Representative transcript
(Beta-glucuronidase; EC=3.2.1.31; Beta-G1; Precursor;)
genome : 23,980,679 - 24,059,543 (78,865)
query : 1 - 3,342 (3,342/3,342)
12 exons
identity = 0.995
3'(0.993;1.000;1.000;0.968;0.997;1.000;1.000;
1.000;0.942;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.31
KEGG pathway :
00040 : Pentose and glucuronate interconversions (57)
00500 : Starch and sucrose metabolism (71)
00531 : Glycosaminoglycan degradation (15)
00860 : Porphyrin and chlorophyll metabolism (72)
00944 : Flavone and flavonol biosynthesis (31)
00983 : Drug metabolism - other enzymes (20)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 12.5, extr 10, nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021874)
HIX0021874
HIT000321735
(
X52204
)
(Conserved hypothetical protein.)
genome : 23,980,679 - 24,032,591 (51,913)
query : 4 - 906 (903/906)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 13.5, nucl 8, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021874)
HIX0021874
HIT000321734
(
X52203
)
(Immunoglobulin lambda-like polypeptide 1; CD179 antigen-like family member B; Ig lambda-5; Immunoglobulin omega polypeptide; Immunoglobulin-related protein 14.1; AltName: CD_antigen=CD179b; Precursor;)
genome : 23,980,679 - 23,982,949 (2,271)
query : 1 - 906 (906/906)
2 exons
identity = 0.998
3'(1.000;0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 7, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021874)
HIX0021874
HIT000528641 (
ENST00000430707
)
(Immunoglobulin lambda-like polypeptide 1; CD179 antigen-like family member B; Ig lambda-5; Immunoglobulin omega polypeptide; Immunoglobulin-related protein 14.1; AltName: CD_antigen=CD179b; Precursor;)
genome : 23,980,679 - 23,982,949 (2,271)
query : 1 - 906 (906/906)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 7, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021874)
HIX0021874
HIT000523882 (
ENST00000425948
)
(Immunoglobulin lambda-like polypeptide 1; CD179 antigen-like family member B; Ig lambda-5; Immunoglobulin omega polypeptide; Immunoglobulin-related protein 14.1; AltName: CD_antigen=CD179b; Precursor;)
genome : 23,980,865 - 23,982,612 (1,748)
query : 1 - 383 (383/383)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, mito 9, cyto_nucl 8, nucl 7.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021874)
HIX0021874
HIT000526724 (
ENST00000428790
)
(Argininosuccinate lyase; ASAL; EC=4.3.2.1; Arginosuccinase;)
genome : 23,991,400 - 23,995,521 (4,122)
query : 1 - 637 (637/637)
6 exons
identity = 0.969
3'(1.000;0.977;0.979;0.813;0.986;1.000)5'
coverage = 1.000
EC number :
EC 4.3.2.1
KEGG pathway :
00250 : Alanine, aspartate and glutamate metabolism (43)
00330 : Arginine and proline metabolism (98)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 10.6667, extr 10, cyto 6.5,
cyto_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021874)
HIX0021874
HIT000521847 (
ENST00000423913
)
(Beta-glucuronidase; EC=3.2.1.31; Beta-G1; Precursor;)
genome : 23,995,047 - 24,032,480 (37,434)
query : 1 - 584 (584/584)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.31
KEGG pathway :
00040 : Pentose and glucuronate interconversions (57)
00500 : Starch and sucrose metabolism (71)
00531 : Glycosaminoglycan degradation (15)
00860 : Porphyrin and chlorophyll metabolism (72)
00944 : Flavone and flavonol biosynthesis (31)
00983 : Drug metabolism - other enzymes (20)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 7.5, nucl 6.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021874)
HIX0021874
HIT000054963
(
BX538181
)
(Beta-glucuronidase; EC=3.2.1.31; Beta-G1; Precursor;)
genome : 23,995,357 - 24,059,534 (64,178)
query : 2 - 3,037 (3,036/3,065)
12 exons
identity = 0.994
3'(1.000;0.993;0.993;0.965;1.000;0.998;1.000;
1.000;0.942;0.994;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.31
KEGG pathway :
00040 : Pentose and glucuronate interconversions (57)
00500 : Starch and sucrose metabolism (71)
00531 : Glycosaminoglycan degradation (15)
00860 : Porphyrin and chlorophyll metabolism (72)
00944 : Flavone and flavonol biosynthesis (31)
00983 : Drug metabolism - other enzymes (20)
01100 : Metabolic pathways (1346)
InterPro :
IPR006104 : Glycosyl hydrolases family 2, sugar binding domain
IPR008979 : Galactose-binding domain-like
GO :
0004553 : Molecular Function : hydrolase activity, hydrolyzing O-glycosyl compounds
0005975 : Biological Process : carbohydrate metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13.5, cyto 8, E.R._mito 7.5, cyto_nucl 7, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021874)
HIX0021874
HIT000518998 (
ENST00000421064
)
(Beta-glucuronidase; EC=3.2.1.31; Beta-G1; Precursor;)
genome : 23,995,356 - 24,059,534 (64,179)
query : 1 - 3,041 (3,041/3,041)
12 exons
identity = 0.997
3'(1.000;1.000;1.000;0.965;1.000;1.000;1.000;
1.000;0.953;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.31
KEGG pathway :
00040 : Pentose and glucuronate interconversions (57)
00500 : Starch and sucrose metabolism (71)
00531 : Glycosaminoglycan degradation (15)
00860 : Porphyrin and chlorophyll metabolism (72)
00944 : Flavone and flavonol biosynthesis (31)
00983 : Drug metabolism - other enzymes (20)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13.5, cyto 8, E.R._mito 7.5, cyto_nucl 7, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021874)
HIX0021874
HIT000532827 (
ENST00000434893
)
(Beta-glucuronidase; EC=3.2.1.31; Beta-G1; Precursor;)
genome : 23,995,357 - 24,029,101 (33,745)
query : 1 - 403 (403/403)
3 exons
identity = 0.985
3'(1.000;1.000;0.933)5'
coverage = 1.000
EC number :
EC 3.2.1.31
KEGG pathway :
00040 : Pentose and glucuronate interconversions (57)
00500 : Starch and sucrose metabolism (71)
00531 : Glycosaminoglycan degradation (15)
00860 : Porphyrin and chlorophyll metabolism (72)
00944 : Flavone and flavonol biosynthesis (31)
00983 : Drug metabolism - other enzymes (20)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 12, extr 8, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021874)
HIX0041249
HIT000007648
(
AK024374
)
Representative transcript
(Argininosuccinate lyase; ASAL; EC=4.3.2.1; Arginosuccinase;)
genome : 23,995,358 - 24,000,225 (4,868)
query : 1 - 4,144 (4,144/4,144)
2 exons
identity = 0.987
5'(0.989;0.986)3'
coverage = 1.000
EC number :
EC 4.3.2.1
KEGG pathway :
00250 : Alanine, aspartate and glutamate metabolism (43)
00330 : Arginine and proline metabolism (98)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, extr_plas 13.5, extr 3, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041249)
HIX0021874
HIT000306793
(
CR933599
)
(Beta-glucuronidase; EC=3.2.1.31; Precursor;)
genome : 24,000,282 - 24,035,372 (35,091)
query : 1 - 5,004 (5,004/5,022)
3 exons
identity = 0.998
3'(0.996;1.000;0.999)5'
coverage = 1.000
EC number :
EC 3.2.1.31
KEGG pathway :
00040 : Pentose and glucuronate interconversions (57)
00500 : Starch and sucrose metabolism (71)
00531 : Glycosaminoglycan degradation (15)
00860 : Porphyrin and chlorophyll metabolism (72)
00944 : Flavone and flavonol biosynthesis (31)
00983 : Drug metabolism - other enzymes (20)
01100 : Metabolic pathways (1346)
InterPro :
IPR006103 : Glycoside hydrolase, family 2, TIM barrel
GO :
0004553 : Molecular Function : hydrolase activity, hydrolyzing O-glycosyl compounds
0005975 : Biological Process : carbohydrate metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 12.5, nucl 11.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021874)
HIX0021874
HIT000515128 (
ENST00000417194
)
(Beta-glucuronidase; EC=3.2.1.31; Precursor;)
genome : 24,000,281 - 24,035,372 (35,092)
query : 1 - 5,004 (5,004/5,004)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.31
KEGG pathway :
00040 : Pentose and glucuronate interconversions (57)
00500 : Starch and sucrose metabolism (71)
00531 : Glycosaminoglycan degradation (15)
00860 : Porphyrin and chlorophyll metabolism (72)
00944 : Flavone and flavonol biosynthesis (31)
00983 : Drug metabolism - other enzymes (20)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 13, cyto 10.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021874)
HIX0021874
HIT000016704
(
AK091837
)
(Beta-glucuronidase; EC=3.2.1.31; Beta-G1; Precursor;)
genome : 24,001,950 - 24,059,545 (57,596)
query : 1 - 2,801 (2,801/2,801)
10 exons
identity = 0.995
3'(0.996;0.993;0.960;1.000;0.991;1.000;0.942;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.31
KEGG pathway :
00040 : Pentose and glucuronate interconversions (57)
00500 : Starch and sucrose metabolism (71)
00531 : Glycosaminoglycan degradation (15)
00860 : Porphyrin and chlorophyll metabolism (72)
00944 : Flavone and flavonol biosynthesis (31)
00983 : Drug metabolism - other enzymes (20)
01100 : Metabolic pathways (1346)
InterPro :
IPR006104 : Glycosyl hydrolases family 2, sugar binding domain
IPR008979 : Galactose-binding domain-like
GO :
0004553 : Molecular Function : hydrolase activity, hydrolyzing O-glycosyl compounds
0005975 : Biological Process : carbohydrate metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13.5, cyto 8, E.R._mito 7.5, cyto_nucl 7, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021874)
HIX0021874
HIT000217177
(
S82637
)
(Beta-glucuronidase; EC=3.2.1.31; Beta-G1; Precursor;)
genome : 24,002,053 - 24,032,591 (30,539)
query : 1 - 452 (452/452)
3 exons
identity = 0.998
3'(1.000;1.000;0.994)5'
coverage = 1.000
EC number :
EC 3.2.1.31
KEGG pathway :
00040 : Pentose and glucuronate interconversions (57)
00500 : Starch and sucrose metabolism (71)
00531 : Glycosaminoglycan degradation (15)
00860 : Porphyrin and chlorophyll metabolism (72)
00944 : Flavone and flavonol biosynthesis (31)
00983 : Drug metabolism - other enzymes (20)
01100 : Metabolic pathways (1346)
InterPro :
IPR006103 : Glycoside hydrolase, family 2, TIM barrel
GO :
0004553 : Molecular Function : hydrolase activity, hydrolyzing O-glycosyl compounds
0005975 : Biological Process : carbohydrate metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, mito 6, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021874)
HIX0021874
HIT000553654_01 (
ENST00000455720
)
(Beta-glucuronidase; EC=3.2.1.31; Beta-G1; Precursor;)
genome : 24,002,053 - 24,002,190 (138)
query : 1 - 138 (138/138)
1 exon
identity = 0.986
3'(0.986)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, cyto_nucl 11.5, extr 11, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021874)
HIX0021874
HIT000533802 (
ENST00000435868
)
(Beta-glucuronidase; EC=3.2.1.31; Precursor;)
genome : 24,002,056 - 24,059,482 (57,427)
query : 1 - 847 (847/847)
5 exons
identity = 0.991
3'(1.000;0.964;0.984;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.31
KEGG pathway :
00040 : Pentose and glucuronate interconversions (57)
00500 : Starch and sucrose metabolism (71)
00531 : Glycosaminoglycan degradation (15)
00860 : Porphyrin and chlorophyll metabolism (72)
00944 : Flavone and flavonol biosynthesis (31)
00983 : Drug metabolism - other enzymes (20)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, nucl 11.5, cyto 10.5, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021874)
HIX0021874
HIT000536792 (
ENST00000438858
)
(Beta-glucuronidase; EC=3.2.1.31; Beta-G1; Precursor;)
genome : 24,002,063 - 24,032,678 (30,616)
query : 1 - 543 (543/543)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.31
KEGG pathway :
00040 : Pentose and glucuronate interconversions (57)
00500 : Starch and sucrose metabolism (71)
00531 : Glycosaminoglycan degradation (15)
00860 : Porphyrin and chlorophyll metabolism (72)
00944 : Flavone and flavonol biosynthesis (31)
00983 : Drug metabolism - other enzymes (20)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 12, extr 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021874)
HIX0021874
HIT000556488 (
ENST00000458554
)
(Conserved hypothetical protein.)
genome : 24,020,797 - 24,032,484 (11,688)
query : 1 - 438 (438/438)
3 exons
identity = 0.991
3'(1.000;1.000;0.939)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, extr 13, cyto_nucl 10, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021874)
HIX0021874
HIT000008587
(
AK025313
)
(Conserved hypothetical protein.)
genome : 24,023,057 - 24,026,232 (3,176)
query : 1 - 3,175 (3,175/3,192)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 9, cyto_nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021874)
HIX0021874
HIT000549853 (
ENST00000451919
)
(Hypothetical short protein.)
genome : 24,025,912 - 24,030,167 (4,256)
query : 1 - 654 (654/654)
3 exons
identity = 0.991
3'(1.000;0.965;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021874)
HIX0021874
HIT000535796 (
ENST00000437862
)
(Hypothetical short protein.)
genome : 24,025,931 - 24,030,006 (4,076)
query : 1 - 515 (515/515)
3 exons
identity = 0.986
3'(1.000;0.968;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021874)
HIX0041142
HIT000539831 (
ENST00000441897
)
(Ral-GDS-related protein; hRGR; Ral guanine nucleotide dissociation stimulator-like 4; RalGDS-like 4;)
genome : 24,030,323 - 24,041,363 (11,041)
query : 1 - 3,779 (3,779/3,779)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto_mito 10, extr 9, lyso 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041142)
HIX0041142
HIT000249628
(
AK131340
)
(Ral-GDS-related protein; hRGR; Ral guanine nucleotide dissociation stimulator-like 4; RalGDS-like 4;)
genome : 24,030,323 - 24,041,354 (11,032)
query : 1 - 3,770 (3,770/3,770)
14 exons
identity = 0.998
5'(0.994;1.000;0.999;0.995;0.997;0.995;1.000;
1.000;1.000;0.987;1.000;1.000;0.992;0.998)3'
coverage = 1.000
InterPro :
IPR001895 : Ras guanine-nucleotide exchange factors catalytic domain
IPR023578 : Ras guanine nucleotide exchange factor domain
GO :
0005085 : Molecular Function : guanyl-nucleotide exchange factor activity
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto_mito 14.5, cyto 3, extr 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041142)
HIX0041142
HIT000503739 (
ENST00000401461
)
(Ral-GDS-related protein; hRGR; Ral guanine nucleotide dissociation stimulator-like 4; RalGDS-like 4;)
genome : 24,030,329 - 24,041,363 (11,035)
query : 1 - 2,420 (2,420/2,420)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 9.5, extr 8, mito 5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041142)
HIX0041142
HIT000084430
(
AY101396
)
Representative transcript
(Ral-GDS-related protein; hRGR; Ral guanine nucleotide dissociation stimulator-like 4; RalGDS-like 4;)
genome : 24,033,048 - 24,041,363 (8,316)
query : 1 - 2,885 (2,885/2,897)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001895 : Ras guanine-nucleotide exchange factors catalytic domain
IPR023578 : Ras guanine nucleotide exchange factor domain
GO :
0005085 : Molecular Function : guanyl-nucleotide exchange factor activity
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto_mito 10.5, extr 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041142)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : BC065335
Oryzias
sp. (Medaka) : ENSORLT00000020268
Pongo
sp. (Orangutan) : ENSPPYT00000013495
Pan
sp. (Chimpanzee) : ENSPTRT00000056994
Takifugu
sp. (Fugu) : SINFRUT00000130037
Gallus
sp. (Chicken) : XM_425331
Macaca
sp. (Macaque) : XR_012776
HIX0041142
HIT000214385 (
NM_153615
)
(Ral-GDS-related protein; hRGR; Ral guanine nucleotide dissociation stimulator-like 4; RalGDS-like 4;)
genome : 24,033,048 - 24,041,363 (8,316)
query : 1 - 2,885 (2,885/2,897)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto_mito 10.5, extr 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041142)
HIX0041142
HIT000113322 (
ENST00000290691
)
(Ral-GDS-related protein; hRGR; Ral guanine nucleotide dissociation stimulator-like 4; RalGDS-like 4;)
genome : 24,033,048 - 24,041,363 (8,316)
query : 1 - 2,885 (2,885/2,885)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto_mito 10.5, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041142)
HIX0041142
HIT000571969 (
ENST00000467354
)
(Ral-GDS-related protein; hRGR; Ral guanine nucleotide dissociation stimulator-like 4; RalGDS-like 4;)
genome : 24,033,493 - 24,041,363 (7,871)
query : 1 - 2,699 (2,699/2,699)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15.5, cyto 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041142)
HIX0041142
HIT000336518
(
BC101108
)
(Ral-GDS-related protein; hRGR; Ral guanine nucleotide dissociation stimulator-like 4; RalGDS-like 4;)
genome : 24,033,493 - 24,041,165 (7,673)
query : 1 - 2,656 (2,656/2,656)
10 exons
identity = 0.999
5'(0.999;1.000;0.995;1.000;1.000;0.987;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001895 : Ras guanine-nucleotide exchange factors catalytic domain
IPR023578 : Ras guanine nucleotide exchange factor domain
GO :
0005085 : Molecular Function : guanyl-nucleotide exchange factor activity
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 12, mito 6, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041142)
HIX0041142
HIT000336519
(
BC101109
)
(Ral-GDS-related protein; hRGR; Ral guanine nucleotide dissociation stimulator-like 4; RalGDS-like 4;)
genome : 24,033,493 - 24,041,165 (7,673)
query : 1 - 2,501 (2,501/2,501)
11 exons
identity = 0.999
5'(0.999;1.000;0.995;1.000;1.000;0.987;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001895 : Ras guanine-nucleotide exchange factors catalytic domain
IPR023578 : Ras guanine nucleotide exchange factor domain
GO :
0005085 : Molecular Function : guanyl-nucleotide exchange factor activity
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15.5, cyto 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041142)
HIX0041142
HIT000336520
(
BC101110
)
(Ral-GDS-related protein; hRGR; Ral guanine nucleotide dissociation stimulator-like 4; RalGDS-like 4;)
genome : 24,033,493 - 24,041,165 (7,673)
query : 1 - 2,333 (2,333/2,333)
12 exons
identity = 0.999
5'(0.999;1.000;1.000;0.995;1.000;1.000;0.987;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001895 : Ras guanine-nucleotide exchange factors catalytic domain
IPR023578 : Ras guanine nucleotide exchange factor domain
GO :
0005085 : Molecular Function : guanyl-nucleotide exchange factor activity
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, cyto_mito 15.5, cyto 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041142)
HIX0041142
HIT000521326 (
ENST00000423392
)
(Ral-GDS-related protein; hRGR; Ral guanine nucleotide dissociation stimulator-like 4; RalGDS-like 4;)
genome : 24,033,493 - 24,041,165 (7,673)
query : 1 - 2,333 (2,333/2,333)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto_mito 12, extr 5, cyto 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041142)
HIX0041142
HIT000564949 (
ENST00000460003
)
(Ral-GDS-related protein; hRGR; Ral guanine nucleotide dissociation stimulator-like 4; RalGDS-like 4;)
genome : 24,033,493 - 24,041,165 (7,673)
query : 1 - 2,656 (2,656/2,656)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 12, mito 6, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041142)
HIX0021874
HIT000495037
(
AK300413
)
(Beta-glucuronidase; EC=3.2.1.31; Beta-G1; Precursor;)
genome : 24,037,196 - 24,059,512 (22,317)
query : 1 - 1,450 (1,450/1,450)
7 exons
identity = 0.994
3'(0.994;1.000;1.000;0.953;0.994;0.995;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.31
KEGG pathway :
00040 : Pentose and glucuronate interconversions (57)
00500 : Starch and sucrose metabolism (71)
00531 : Glycosaminoglycan degradation (15)
00860 : Porphyrin and chlorophyll metabolism (72)
00944 : Flavone and flavonol biosynthesis (31)
00983 : Drug metabolism - other enzymes (20)
01100 : Metabolic pathways (1346)
InterPro :
IPR006104 : Glycosyl hydrolases family 2, sugar binding domain
IPR008979 : Galactose-binding domain-like
GO :
0004553 : Molecular Function : hydrolase activity, hydrolyzing O-glycosyl compounds
0005975 : Biological Process : carbohydrate metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 14.1667, cyto 5.5, cyto_pero 4.5,
extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021874)
HIX0041142
HIT000098854
(
BC047947
)
(Ral-GDS-related protein; hRGR; Ral guanine nucleotide dissociation stimulator-like 4; RalGDS-like 4;)
genome : 24,038,688 - 24,041,357 (2,670)
query : 140 - 2,327 (2,188/2,407)
2 exons
identity = 0.999
5'(0.995;0.999)3'
coverage = 0.940
InterPro :
IPR001895 : Ras guanine-nucleotide exchange factors catalytic domain
IPR023578 : Ras guanine nucleotide exchange factor domain
GO :
0005085 : Molecular Function : guanyl-nucleotide exchange factor activity
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 15, cyto 8.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041142)
HIX0041142
HIT000550142 (
ENST00000452208
)
(Ral-GDS-related protein; hRGR; Ral guanine nucleotide dissociation stimulator-like 4; RalGDS-like 4;)
genome : 24,038,671 - 24,041,363 (2,693)
query : 1 - 759 (759/759)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, cyto 12.5, nucl 10.5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041142)
HIX0041142
HIT000565107 (
ENST00000460167
)
(Ral-GDS-related protein; hRGR; Ral guanine nucleotide dissociation stimulator-like 4; RalGDS-like 4;)
genome : 24,040,257 - 24,040,731 (475)
query : 1 - 394 (394/394)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 10.5, cyto_nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041142)
HIX0021874
HIT000530529 (
ENST00000432595
)
(Conserved hypothetical protein.)
genome : 24,042,976 - 24,059,454 (16,479)
query : 1 - 601 (601/601)
5 exons
identity = 0.995
3'(1.000;0.982;0.991;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 14.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021874)
HIX0021874
HIT000542154 (
ENST00000444220
)
(Beta-glucuronidase; EC=3.2.1.31; Beta-G1; Precursor;)
genome : 24,052,032 - 24,059,514 (7,483)
query : 1 - 614 (614/614)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.31
KEGG pathway :
00040 : Pentose and glucuronate interconversions (57)
00500 : Starch and sucrose metabolism (71)
00531 : Glycosaminoglycan degradation (15)
00860 : Porphyrin and chlorophyll metabolism (72)
00944 : Flavone and flavonol biosynthesis (31)
00983 : Drug metabolism - other enzymes (20)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 13.3333, cyto 7, mito 5,
cyto_pero 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021874)
HIX0021874
HIT000535228 (
ENST00000437294
)
(Beta-glucuronidase; EC=3.2.1.31; Precursor;)
genome : 24,056,373 - 24,059,543 (3,171)
query : 1 - 557 (557/557)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.31
KEGG pathway :
00040 : Pentose and glucuronate interconversions (57)
00500 : Starch and sucrose metabolism (71)
00531 : Glycosaminoglycan degradation (15)
00860 : Porphyrin and chlorophyll metabolism (72)
00944 : Flavone and flavonol biosynthesis (31)
00983 : Drug metabolism - other enzymes (20)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto_nucl 12.3333, extr 11, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021874)
HIX0041229
HIT000066966
(
AF086087
)
Representative transcript
(Conserved hypothetical protein.)
genome : 24,080,865 - 24,081,476 (612)
query : 1 - 612 (612/621)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 19, extr 10, cyto_mito 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041229)
HIX0041229
HIT000714549 (
ENST00000602816
)
(Conserved hypothetical protein.)
genome : 24,080,865 - 24,081,476 (612)
query : 1 - 612 (612/612)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 19, extr 10, cyto_mito 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041229)
HIX0041265
HIT000046384
(
AK126511
)
Representative transcript
(Conserved hypothetical protein.)
genome : 24,080,870 - 24,085,694 (4,825)
query : 1 - 3,910 (3,910/3,910)
2 exons
identity = 0.997
5'(0.999;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, mito 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0041265)
HIX0027835
HIT000052333
(
BC040161
)
Representative transcript
(Zinc finger protein 70; Zinc finger protein N27C7-1;)
genome : 24,083,772 - 24,093,279 (9,508)
query : 1 - 4,017 (4,017/4,042)
2 exons
identity = 1.000
3'(0.999;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027835)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK029509
Equus
sp. (Horse) : ENSECAT00000004901
Monodelphis
sp. (Opossum) : ENSMODT00000006657
Pongo
sp. (Orangutan) : ENSPPYT00000013498
Pan
sp. (Chimpanzee) : XM_525646
Canis
sp. (Dog) : XM_543536
Bos
sp. (Cow) : XM_583424
HIX0027835
HIT000317551 (
NM_021916
)
(Zinc finger protein 70; Zinc finger protein N27C7-1;)
genome : 24,083,772 - 24,093,279 (9,508)
query : 1 - 4,017 (4,017/4,042)
2 exons
identity = 1.000
3'(0.999;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027835)
HIX0027835
HIT000134606 (
ENST00000341976
)
(Zinc finger protein 70; Zinc finger protein N27C7-1;)
genome : 24,083,769 - 24,093,279 (9,511)
query : 1 - 4,020 (4,020/4,020)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027835)
HIX0027835
HIT000042594
(
AK122721
)
(Zinc finger protein 70; Zinc finger protein N27C7-1;)
genome : 24,083,771 - 24,087,355 (3,585)
query : 1 - 3,586 (3,586/3,586)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027835)
HIX0027835
HIT000267549
(
CR456615
)
(Zinc finger protein 70; Zinc finger protein N27C7-1;)
genome : 24,085,969 - 24,092,952 (6,984)
query : 1 - 1,493 (1,493/1,493)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027835)
HIX0027835
HIT000440800
(
DQ574269
)
(Non-protein coding transcript.)
genome : 24,086,481 - 24,086,510 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027835)
HIX0021114
HIT000038883
(
BC020666
)
Representative transcript
(Pre-B lymphocyte protein 3; N27C7-2; Protein VPreB3; Precursor;)
genome : 24,094,930 - 24,096,655 (1,726)
query : 1 - 610 (610/637)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 2, mito 2, cyto_mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021114)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK008794
Canis
sp. (Dog) : ENSCAFT00000022422
Equus
sp. (Horse) : ENSECAT00000019040
Rattus
sp. (Rat) : ENSRNOT00000032290
Pan
sp. (Chimpanzee) : XM_001169411
Monodelphis
sp. (Opossum) : XM_001381299
Gallus
sp. (Chicken) : XM_415223
Bos
sp. (Cow) : XM_867699
HIX0021114
HIT000204351 (
NM_013378
)
(Pre-B lymphocyte protein 3; N27C7-2; Protein VPreB3; Precursor;)
genome : 24,094,930 - 24,096,630 (1,701)
query : 1 - 585 (585/602)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 2, mito 2, cyto_mito 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021114)
HIX0021114
HIT000072227
(
AF163825
)
(Pre-B lymphocyte protein 3; N27C7-2; Protein VPreB3; Precursor;)
genome : 24,094,932 - 24,096,592 (1,661)
query : 1 - 545 (545/548)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 2, mito 2, cyto_mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021114)
HIX0021114
HIT000105907 (
ENST00000248948
)
(Pre-B lymphocyte protein 3; N27C7-2; Protein VPreB3; Precursor;)
genome : 24,094,930 - 24,096,655 (1,726)
query : 1 - 610 (610/610)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 2, mito 2, cyto_mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021114)
HIX0021114
HIT000481651 (
ENST00000398465
)
(Pre-B lymphocyte protein 3; N27C7-2; Protein VPreB3; Precursor;)
genome : 24,094,930 - 24,096,596 (1,667)
query : 1 - 503 (503/503)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021114)
HIX0021114
HIT000253044
(
AY359000
)
(Pre-B lymphocyte protein 3; N27C7-2; Protein VPreB3; Precursor;)
genome : 24,094,931 - 24,096,630 (1,700)
query : 1 - 584 (584/584)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 2, mito 2, cyto_mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021114)
HIX0021114
HIT000267544
(
CR456610
)
(Pre-B lymphocyte protein 3; N27C7-2; Protein VPreB3; Precursor;)
genome : 24,095,006 - 24,096,579 (1,574)
query : 1 - 458 (458/458)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 2, mito 2, cyto_mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021114)
HIX0021114
HIT000430964
(
AK312098
)
(Pre-B lymphocyte protein 3; N27C7-2; Protein VPreB3; Precursor;)
genome : 24,095,063 - 24,096,585 (1,523)
query : 1 - 407 (407/407)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 2, mito 2, cyto_mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021114)
HIX0016285
HIT000266256
(
BC089413
)
Representative transcript
(Ig lambda-2 chain C regions;)
genome : 22,380,462 - 23,243,615 (863,154)
query : 1 - 857 (857/880)
4 exons
identity = 0.994
5'(0.952;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : BX929707
Monodelphis
sp. (Opossum) : ENSMODT00000018160
Pan
sp. (Chimpanzee) : X65286
Macaca
sp. (Macaque) : XM_001090378
HIX0016285
HIT000066170
(
AF076202
)
(Ig lambda chain V-II region MGC;)
genome : 22,385,582 - 23,247,201 (861,620)
query : 7 - 326 (320/326)
2 exons
identity = 0.984
5'(0.878)3'
coverage = 0.982
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 11, nucl 3.5, cyto_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000066173
(
AF076205
)
(Ig lambda chain V-I region WAH;)
genome : 22,385,582 - 23,247,210 (861,629)
query : 5 - 333 (329/354)
2 exons
identity = 0.957
5'(0.820)3'
coverage = 0.929
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, extr 6, nucl 5.5, cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000066175
(
AF076207
)
(Ig lambda chain V-II region WIN;)
genome : 22,385,582 - 23,241,840 (856,259)
query : 5 - 333 (329/342)
2 exons
identity = 0.976
5'(0.860)3'
coverage = 0.962
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 11, nucl 4.5, cyto_nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000247537
(
AJ408282
)
(Ig lambda chain V-III region SH;)
genome : 22,385,580 - 23,241,837 (856,258)
query : 3 - 327 (325/327)
2 exons
identity = 0.963
5'(0.864)3'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 8, nucl 7.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000338941
(
BC107852
)
(Ig lambda-2 chain C regions;)
genome : 22,453,110 - 23,248,969 (795,860)
query : 1 - 906 (906/955)
4 exons
identity = 0.976
5'(0.822;0.996)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000322146
(
X57814
)
(Ig lambda-2 chain C regions;)
genome : 22,453,148 - 23,243,563 (790,416)
query : 2 - 820 (819/820)
4 exons
identity = 0.974
5'(0.822;0.998)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 3, lyso 3, cyto 1.5, cyto_pero 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000013788
(
AK057174
)
(Ig lambda-1 chain C regions;)
genome : 22,453,147 - 23,238,011 (784,865)
query : 1 - 2,423 (2,423/2,423)
3 exons
identity = 0.972
5'(0.982)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 13.5, extr 7, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000325836
(
Y14738
)
(Ig lambda-2 chain C regions;)
genome : 22,453,149 - 23,248,969 (795,821)
query : 1 - 865 (865/882)
4 exons
identity = 0.991
5'(0.952;0.993)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000069533
(
AF107242
)
(Ig lambda chain V region 4A; Precursor;)
genome : 22,453,327 - 23,247,207 (793,881)
query : 1 - 330 (330/330)
2 exons
identity = 0.982
5'(0.955)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 13, mito 12, nucl 3, cyto 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000247263
(
AJ388662
)
(Ig lambda chain V region 4A; Precursor;)
genome : 22,453,327 - 23,236,003 (782,677)
query : 1 - 336 (336/336)
2 exons
identity = 0.962
5'(0.846)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, extr 11, nucl 4.5, cyto_nucl 4, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000320919
(
X02422
)
(Ig lambda chain V-VI region EB4; Precursor;)
genome : 22,550,113 - 23,248,868 (698,756)
query : 1 - 838 (838/838)
4 exons
identity = 0.962
5'(0.971;0.942;0.825;0.992)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000558457
(
FJ200244
)
(Ig lambda-2 chain C regions;)
genome : 22,550,199 - 23,248,828 (698,630)
query : 1 - 705 (705/705)
4 exons
identity = 0.979
5'(1.000;0.961;0.971;0.994)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, mito 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000342701
(
DQ322775
)
(Ig lambda chain V-VI region EB4; Precursor;)
genome : 22,550,382 - 23,243,201 (692,820)
query : 8 - 386 (379/392)
3 exons
identity = 0.992
5'(0.997;0.952;1.000)3'
coverage = 0.967
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 13.5, cyto 8.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000064567
(
AF054649
)
(Ig lambda chain V-VI region EB4; Precursor;)
genome : 22,550,381 - 23,264,812 (714,432)
query : 1 - 378 (378/378)
3 exons
identity = 0.968
5'(0.963;0.971;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto_nucl 7.16667, nucl 6.5, cyto_pero 5,
cyto 4.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000064571
(
AF054653
)
(Ig lambda chain V-VI region EB4; Precursor;)
genome : 22,550,381 - 23,264,812 (714,432)
query : 1 - 381 (381/381)
3 exons
identity = 0.951
5'(0.960;0.825;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto_nucl 5.16667, cyto_pero 5, cyto 4.5,
pero 3, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000564467
(
EF710984
)
(Ig lambda chain V-VI region AR;)
genome : 22,550,382 - 23,264,812 (714,431)
query : 2 - 378 (377/378)
3 exons
identity = 0.968
5'(0.976;0.895;0.979)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 9.5, cyto_nucl 8.5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000564468
(
EF710985
)
(Ig lambda chain V-VI region AR;)
genome : 22,550,382 - 23,264,812 (714,431)
query : 2 - 378 (377/378)
3 exons
identity = 0.968
5'(0.976;0.895;0.979)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 9.5, cyto_nucl 8.5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000564476
(
EF710993
)
(Ig lambda chain V-VI region EB4; Precursor;)
genome : 22,550,381 - 23,264,812 (714,432)
query : 1 - 378 (378/378)
3 exons
identity = 0.971
5'(0.976;0.895;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 7.83333, cyto 6.5, cyto_pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000564507
(
EF711024
)
(Ig lambda chain V-VI region EB4; Precursor;)
genome : 22,550,381 - 23,264,812 (714,432)
query : 1 - 381 (381/381)
3 exons
identity = 0.961
5'(0.963;0.923;0.979)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 9.5, cyto_nucl 9.16667, extr 9, mito 7, cyto 5.5,
cyto_pero 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000564508
(
EF711025
)
(Ig lambda chain V-VI region AR;)
genome : 22,550,382 - 23,264,808 (714,427)
query : 2 - 374 (373/374)
3 exons
identity = 0.957
5'(0.952;0.974;0.977)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 16.5, cyto 11.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000469209
(
EF589390
)
(Ig lambda-2 chain C regions;)
genome : 22,550,381 - 23,248,817 (698,437)
query : 1 - 637 (637/648)
3 exons
identity = 0.965
5'(0.960;0.804;1.000)3'
coverage = 0.983
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto_pero 4.33333, pero 4, cyto_nucl 3.16667,
nucl 2.5, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000469241
(
EF589422
)
(Ig lambda-2 chain C regions;)
genome : 22,550,381 - 23,248,828 (698,448)
query : 1 - 651 (651/651)
3 exons
identity = 0.964
5'(0.971;0.758;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11.5, extr 11, cyto_nucl 11, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000469252
(
EF589433
)
(Ig lambda-2 chain C regions;)
genome : 22,550,381 - 23,248,828 (698,448)
query : 1 - 651 (651/651)
3 exons
identity = 0.967
5'(0.950;0.825;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, cyto 12, nucl 11, extr 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000469278
(
EF589459
)
(Ig lambda-2 chain C regions;)
genome : 22,550,381 - 23,248,828 (698,448)
query : 1 - 648 (648/648)
3 exons
identity = 0.951
5'(0.924;0.825;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 16, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000469281
(
EF589462
)
(Ig lambda-2 chain C regions;)
genome : 22,550,381 - 23,248,828 (698,448)
query : 1 - 648 (648/648)
3 exons
identity = 0.952
5'(0.945;0.789;0.987)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 9.16667, nucl 9, cyto 7, cyto_pero 6.66667,
mito_nucl 6.66667, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000469285
(
EF589466
)
(Ig lambda-2 chain C regions;)
genome : 22,550,381 - 23,248,828 (698,448)
query : 1 - 651 (651/651)
3 exons
identity = 0.966
5'(0.975;0.797;0.991)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto_pero 4.83333, cyto_nucl 4.66667,
nucl 4.5, pero 4, cyto 3.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000469289
(
EF589470
)
(Ig lambda-2 chain C regions;)
genome : 22,550,381 - 23,248,828 (698,448)
query : 1 - 651 (651/651)
3 exons
identity = 0.962
5'(0.943;0.850;0.994)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto_nucl 12.5, cyto 10, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000469318
(
EF589499
)
(Ig lambda-2 chain C regions;)
genome : 22,550,381 - 23,248,828 (698,448)
query : 1 - 651 (651/651)
3 exons
identity = 0.985
5'(0.976;0.949;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, cyto 12, nucl 11, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000469336
(
EF589517
)
(Ig lambda-2 chain C regions;)
genome : 22,550,381 - 23,248,828 (698,448)
query : 1 - 648 (648/648)
3 exons
identity = 0.960
5'(0.960;0.768;0.994)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, cyto_nucl 10.1667, cyto_pero 7.66667, nucl 7,
extr 5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000469344
(
EF589525
)
(Ig lambda-2 chain C regions;)
genome : 22,550,381 - 23,248,828 (698,448)
query : 1 - 648 (648/648)
3 exons
identity = 0.994
5'(0.990;1.000;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 14.5, cyto 12.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000469357
(
EF589538
)
(Ig lambda-2 chain C regions;)
genome : 22,550,381 - 23,248,828 (698,448)
query : 1 - 648 (648/648)
3 exons
identity = 0.969
5'(0.967;0.804;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11, mito 10, cyto_nucl 9.16667,
cyto_pero 5.16667, cyto 5, E.R._mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000469380
(
EF589561
)
(Ig lambda-2 chain C regions;)
genome : 22,550,381 - 23,248,828 (698,448)
query : 1 - 651 (651/651)
3 exons
identity = 0.986
5'(0.973;0.974;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto_pero 3.33333, pero 3, cyto_nucl 2.16667,
extr 2, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000469384
(
EF589565
)
(Ig lambda-2 chain C regions;)
genome : 22,550,381 - 23,248,828 (698,448)
query : 1 - 648 (648/648)
3 exons
identity = 0.966
5'(0.956;0.821;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, nucl 10, cyto_nucl 8.16667,
mito_pero 8.16667, cyto_pero 4.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000557833
(
EU599340
)
(Ig lambda-2 chain C regions;)
genome : 22,550,381 - 23,248,828 (698,448)
query : 1 - 651 (651/651)
3 exons
identity = 0.964
5'(0.967;0.803;0.994)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10.5, nucl 9.5, cyto 8.5, mito 6, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000557834
(
EU599341
)
(Ig lambda-2 chain C regions;)
genome : 22,550,382 - 23,248,828 (698,447)
query : 2 - 651 (650/651)
3 exons
identity = 0.966
5'(0.950;0.850;0.997)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 8.5, cyto_nucl 7.66667, mito 7,
cyto_pero 5.83333, cyto 5.5, extr 5, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000557835
(
EU599342
)
(Ig lambda-2 chain C regions;)
genome : 22,550,381 - 23,248,828 (698,448)
query : 1 - 642 (642/642)
3 exons
identity = 0.961
5'(0.956;0.774;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, cyto_nucl 10.6667, cyto_pero 8.66667, nucl 8,
extr 4, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000557837
(
EU599344
)
(Ig lambda-2 chain C regions;)
genome : 22,550,381 - 23,248,828 (698,448)
query : 1 - 651 (651/651)
3 exons
identity = 0.960
5'(0.940;0.850;0.994)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 9.33333, cyto 8.5, cyto_mito 8.5, nucl 8,
mito 8, cyto_pero 6.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000557838
(
EU599345
)
(Ig lambda-2 chain C regions;)
genome : 22,550,383 - 23,248,828 (698,446)
query : 3 - 651 (649/651)
3 exons
identity = 0.960
5'(0.945;0.814;1.000)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.3333, cyto 13.5, nucl 11,
cyto_pero 8.66667, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000557840
(
EU599347
)
(Ig lambda-2 chain C regions;)
genome : 22,550,381 - 23,248,828 (698,448)
query : 1 - 645 (645/645)
3 exons
identity = 0.961
5'(0.953;0.815;0.994)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19.5, cyto_mito 12.5, cyto_pero 4.16667, cyto 4,
cyto_nucl 4, nucl 2.5, extr 2, pero 2, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000469365
(
EF589546
)
(Ig lambda-2 chain C regions;)
genome : 22,550,381 - 23,248,822 (698,442)
query : 1 - 642 (642/642)
3 exons
identity = 0.961
5'(0.956;0.768;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto 7, cyto_nucl 6.66667, cyto_pero 6.16667,
nucl 4, extr 3, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000722527
(
KC417394
)
(Ig lambda chain V-VI region EB4; Precursor;)
genome : 22,550,381 - 23,247,204 (696,824)
query : 1 - 330 (330/330)
2 exons
identity = 0.961
5'(0.982;0.855)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto_nucl 9.16667, nucl 8, extr 6, cyto 6,
cyto_pero 4.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000469225
(
EF589406
)
(Ig lambda-2 chain C regions;)
genome : 22,550,381 - 23,243,472 (693,092)
query : 1 - 651 (651/651)
3 exons
identity = 0.971
5'(0.982;0.788;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto_pero 3.83333, cyto_nucl 3.66667,
nucl 3.5, pero 3, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000469249
(
EF589430
)
(Ig lambda-2 chain C regions;)
genome : 22,550,381 - 23,243,472 (693,092)
query : 1 - 651 (651/651)
3 exons
identity = 0.965
5'(0.929;0.947;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, nucl 5.5, cyto_nucl 5.16667,
cyto_pero 4.33333, cyto 3.5, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000064570
(
AF054652
)
(Ig lambda chain V-VI region AR;)
genome : 22,550,382 - 23,243,202 (692,821)
query : 2 - 378 (377/378)
3 exons
identity = 0.973
5'(0.969;0.974;1.000)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 14.5, extr 9, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000069892
(
AF115359
)
(Ig lambda chain V-VI region EB4; Precursor;)
genome : 22,550,382 - 23,243,202 (692,821)
query : 2 - 381 (380/381)
3 exons
identity = 0.961
5'(0.970;0.850;1.000)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 13, extr 8, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000070430
(
AF124182
)
(Ig lambda chain V-VI region EB4; Precursor;)
genome : 22,550,381 - 23,243,202 (692,822)
query : 1 - 381 (381/381)
3 exons
identity = 0.961
5'(0.970;0.850;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto_nucl 7.16667, nucl 6.5, cyto_pero 5,
cyto 4.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000070433
(
AF124185
)
(Ig lambda chain V-VI region EB4; Precursor;)
genome : 22,550,381 - 23,243,202 (692,822)
query : 1 - 378 (378/378)
3 exons
identity = 0.960
5'(0.956;0.947;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 16, cyto 10, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000070582
(
AF127978
)
(Ig lambda chain V-VI region EB4; Precursor;)
genome : 22,550,382 - 23,243,202 (692,821)
query : 2 - 333 (332/333)
4 exons
identity = 0.961
5'(0.934;0.972;0.947;1.000)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto 12, extr 6, cyto_mito 6, cyto_pero 6,
cyto_plas 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000077366
(
AF320839
)
(Ig lambda chain V-VI region EB4; Precursor;)
genome : 22,550,381 - 23,243,202 (692,822)
query : 1 - 378 (378/378)
3 exons
identity = 0.976
5'(0.976;0.974;0.979)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.8333, nucl 8.5, cyto 8, mito 8,
cyto_pero 6.33333, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000077368
(
AF320841
)
(Ig lambda chain V-VI region EB4; Precursor;)
genome : 22,550,381 - 23,243,202 (692,822)
query : 1 - 381 (381/381)
3 exons
identity = 0.979
5'(0.976;0.974;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto_nucl 4.66667, cyto_pero 4.5, cyto 3.5,
pero 3, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000564278
(
EF710795
)
(Ig lambda chain V-VI region EB4; Precursor;)
genome : 22,550,382 - 23,243,202 (692,821)
query : 2 - 379 (378/379)
3 exons
identity = 0.979
5'(0.979;1.000;0.958)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 14.5, cyto 10, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000564281
(
EF710798
)
(Ig lambda chain V-VI region EB4; Precursor;)
genome : 22,550,381 - 23,243,202 (692,822)
query : 1 - 378 (378/378)
3 exons
identity = 0.981
5'(0.980;1.000;0.979)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.3333, cyto 8.5, nucl 8, mito 8,
cyto_pero 6.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000564326
(
EF710843
)
(Ig lambda chain V-VI region EB4; Precursor;)
genome : 22,550,381 - 23,243,202 (692,822)
query : 1 - 381 (381/381)
3 exons
identity = 0.953
5'(0.967;0.800;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto_nucl 9, cyto 7.5, mito_pero 7.5,
nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000564327
(
EF710844
)
(Ig lambda chain V-VI region EB4; Precursor;)
genome : 22,550,382 - 23,243,202 (692,821)
query : 2 - 381 (380/381)
3 exons
identity = 0.951
5'(0.967;0.800;0.979)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 14.5, cyto 9.5, extr 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000564328
(
EF710845
)
(Ig lambda chain V-VI region EB4; Precursor;)
genome : 22,550,382 - 23,243,202 (692,821)
query : 2 - 381 (380/381)
3 exons
identity = 0.953
5'(0.967;0.800;1.000)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 14.5, cyto 9.5, extr 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000564469
(
EF710986
)
(Ig lambda chain V-VI region AR;)
genome : 22,550,382 - 23,243,202 (692,821)
query : 2 - 378 (377/378)
3 exons
identity = 0.971
5'(0.976;0.895;1.000)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 9.5, cyto_nucl 8.5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000564470
(
EF710987
)
(Ig lambda chain V-VI region AR;)
genome : 22,550,382 - 23,243,202 (692,821)
query : 2 - 377 (376/377)
3 exons
identity = 0.966
5'(0.976;0.895;0.957)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 9.5, cyto_nucl 8.5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000564471
(
EF710988
)
(Ig lambda chain V-VI region AR;)
genome : 22,550,382 - 23,243,202 (692,821)
query : 2 - 377 (376/377)
3 exons
identity = 0.966
5'(0.973;0.895;0.979)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 9.5, cyto_nucl 8.5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000564472
(
EF710989
)
(Ig lambda chain V-VI region AR;)
genome : 22,550,382 - 23,243,202 (692,821)
query : 2 - 377 (376/377)
3 exons
identity = 0.966
5'(0.973;0.895;0.979)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 7.33333, cyto 6.5,
cyto_pero 4.83333, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000564474
(
EF710991
)
(Ig lambda chain V-VI region EB4; Precursor;)
genome : 22,550,381 - 23,243,202 (692,822)
query : 1 - 378 (378/378)
3 exons
identity = 0.971
5'(0.976;0.895;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 7.83333, cyto 6.5, cyto_pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000564475
(
EF710992
)
(Ig lambda chain V-VI region AR;)
genome : 22,550,382 - 23,243,202 (692,821)
query : 2 - 378 (377/378)
3 exons
identity = 0.971
5'(0.976;0.895;1.000)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 9.5, cyto_nucl 8.5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000075714
(
AF267875
)
(Ig lambda chain V-VI region EB4; Precursor;)
genome : 22,550,381 - 23,241,840 (691,460)
query : 1 - 342 (342/348)
2 exons
identity = 0.959
5'(0.967;0.911)3'
coverage = 0.983
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, cyto_nucl 11.5, mito 11, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000080273
(
AF462681
)
(Ig lambda chain V-VI region EB4; Precursor;)
genome : 22,550,381 - 23,241,840 (691,460)
query : 1 - 342 (342/348)
2 exons
identity = 0.959
5'(0.967;0.911)3'
coverage = 0.983
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, cyto_nucl 11.5, mito 11, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000246276
(
AJ276098
)
(Ig lambda chain V-VI region WLT;)
genome : 22,550,381 - 23,241,840 (691,460)
query : 1 - 339 (339/342)
2 exons
identity = 0.982
5'(0.983;0.977)3'
coverage = 0.991
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 6.33333, cyto 5.5,
cyto_pero 4.83333, nucl 3, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000469254
(
EF589435
)
(Ig lambda chain V-VI region EB4; Precursor;)
genome : 22,550,381 - 23,241,835 (691,455)
query : 1 - 337 (337/337)
2 exons
identity = 0.956
5'(0.960;0.925)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto_nucl 5.66667, extr 5, cyto 4.5,
cyto_pero 4.5, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000715171
(
HQ172142
)
(Ig lambda chain V-VI region EB4; Precursor;)
genome : 22,550,381 - 23,241,835 (691,455)
query : 1 - 337 (337/337)
2 exons
identity = 0.953
5'(0.960;0.900)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10, cyto_nucl 9.66667, cyto 7.5,
cyto_pero 6.66667, nucl 6.5, extr 5, E.R._mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000469207
(
EF589388
)
(Ig lambda-1 chain C regions;)
genome : 22,550,381 - 23,237,871 (687,491)
query : 1 - 648 (648/648)
3 exons
identity = 0.968
5'(0.971;0.804;0.994)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto_nucl 6.16667, cyto 6, cyto_pero 5.66667,
nucl 4, extr 3, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000564269
(
EF710786
)
(Ig lambda chain V-VI region EB4; Precursor;)
genome : 22,550,382 - 23,237,601 (687,220)
query : 2 - 384 (383/384)
3 exons
identity = 0.956
5'(0.962;0.886;0.979)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 17, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000564270
(
EF710787
)
(Ig lambda chain V-VI region EB4; Precursor;)
genome : 22,550,381 - 23,237,601 (687,221)
query : 1 - 384 (384/384)
3 exons
identity = 0.956
5'(0.962;0.886;0.979)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 13.5, cyto 13.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000564271
(
EF710788
)
(Ig lambda chain V-VI region EB4; Precursor;)
genome : 22,550,382 - 23,237,601 (687,220)
query : 2 - 384 (383/384)
3 exons
identity = 0.956
5'(0.962;0.886;0.979)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 17, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000564273
(
EF710790
)
(Ig lambda chain V-VI region EB4; Precursor;)
genome : 22,550,382 - 23,237,601 (687,220)
query : 2 - 384 (383/384)
3 exons
identity = 0.958
5'(0.962;0.886;1.000)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 17, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000564274
(
EF710791
)
(Ig lambda chain V-VI region EB4; Precursor;)
genome : 22,550,382 - 23,237,601 (687,220)
query : 2 - 384 (383/384)
3 exons
identity = 0.958
5'(0.962;0.886;1.000)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 17, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000564275
(
EF710792
)
(Ig lambda chain V-VI region EB4; Precursor;)
genome : 22,550,382 - 23,237,601 (687,220)
query : 2 - 384 (383/384)
3 exons
identity = 0.956
5'(0.959;0.886;1.000)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 17, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000564509
(
EF711026
)
(Ig lambda chain V-VI region WLT;)
genome : 22,550,382 - 23,237,601 (687,220)
query : 2 - 378 (377/378)
3 exons
identity = 0.960
5'(0.959;0.921;1.000)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 15.5, cyto 10, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000564473
(
EF710990
)
(Ig lambda chain V-VI region AR;)
genome : 22,550,384 - 23,264,812 (714,429)
query : 3 - 377 (375/377)
3 exons
identity = 0.971
5'(0.976;0.895;1.000)3'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 7.83333, cyto 6, cyto_pero 4.66667,
nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000564272
(
EF710789
)
(Ig lambda chain V-VI region EB4; Precursor;)
genome : 22,550,384 - 23,237,601 (687,218)
query : 3 - 383 (381/383)
3 exons
identity = 0.950
5'(0.955;0.886;0.979)3'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 16, nucl 10.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000325055
(
X98219
)
(Ig lambda chain V-VI region EB4; Precursor;)
genome : 22,550,389 - 23,247,204 (696,816)
query : 3 - 330 (328/330)
2 exons
identity = 0.958
5'(0.966;0.897)3'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 12.5, extr 9, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000564295
(
EF710812
)
(Ig lambda chain V-VI region EB4; Precursor;)
genome : 22,550,391 - 23,264,812 (714,422)
query : 1 - 371 (371/371)
3 exons
identity = 0.965
5'(0.965;0.923;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto_pero 5, cyto_nucl 4.66667, cyto 4.5,
extr 3, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000564296
(
EF710813
)
(Ig lambda chain V-VI region EB4; Precursor;)
genome : 22,550,391 - 23,264,812 (714,422)
query : 1 - 370 (370/370)
3 exons
identity = 0.973
5'(0.979;0.923;0.979)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto_pero 5, cyto_nucl 4.66667, cyto 4.5,
pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000564561
(
EF711078
)
(Ig lambda chain V-VI region EB4; Precursor;)
genome : 22,550,391 - 23,264,812 (714,422)
query : 1 - 374 (374/374)
3 exons
identity = 0.955
5'(0.952;0.925;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto_nucl 7.16667, nucl 6, extr 5,
cyto_pero 4.33333, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000564562
(
EF711079
)
(Ig lambda chain V-VI region EB4; Precursor;)
genome : 22,550,391 - 23,264,812 (714,422)
query : 1 - 374 (374/374)
3 exons
identity = 0.960
5'(0.959;0.925;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto_nucl 6.16667, extr 5, cyto_pero 4.33333,
nucl 4, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000564563
(
EF711080
)
(Ig lambda chain V-VI region EB4; Precursor;)
genome : 22,550,391 - 23,264,812 (714,422)
query : 1 - 373 (373/373)
3 exons
identity = 0.958
5'(0.959;0.925;0.979)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto_nucl 6.16667, extr 5, cyto_pero 4.33333,
nucl 4, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000564297
(
EF710814
)
(Ig lambda chain V-VI region EB4; Precursor;)
genome : 22,550,391 - 23,243,202 (692,812)
query : 1 - 371 (371/371)
3 exons
identity = 0.965
5'(0.965;0.923;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto_pero 5, cyto_nucl 4.66667, cyto 4.5,
extr 3, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000041187
(
BC030984
)
(Ig lambda-2 chain C regions;)
genome : 22,712,097 - 23,248,969 (536,873)
query : 1 - 895 (895/924)
4 exons
identity = 0.982
5'(1.000;0.977;0.884;0.991)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000054103
(
BC054893
)
(Ig lambda-2 chain C regions;)
genome : 22,730,358 - 23,248,969 (518,612)
query : 5 - 1,013 (1,009/1,040)
3 exons
identity = 0.955
5'(0.934;0.868;0.985)3'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, extr 10, nucl 2, cyto 1, pero 1, lyso 1,
golg 1, cyto_pero 1, cyto_golg 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000045458
(
AK125585
)
(Ig lambda-2 chain C regions;)
genome : 22,735,202 - 23,248,968 (513,767)
query : 1 - 2,198 (2,198/2,198)
3 exons
identity = 0.967
5'(1.000;0.941;0.969)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 10, cyto 5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000036008
(
BC012876
)
(Ig lambda-1 chain C regions;)
genome : 22,764,124 - 23,238,012 (473,889)
query : 17 - 890 (874/915)
4 exons
identity = 0.973
5'(1.000;0.947;0.826;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000038770
(
BC020233
)
(Ig lambda-2 chain C regions;)
genome : 22,764,115 - 23,243,613 (479,499)
query : 1 - 886 (886/903)
4 exons
identity = 0.995
5'(0.988;1.000;0.929;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000039403
(
BC022098
)
(Ig lambda-2 chain C regions;)
genome : 22,764,117 - 23,248,969 (484,853)
query : 1 - 883 (883/919)
4 exons
identity = 0.988
5'(1.000;0.987;0.881;0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000038438
(
BC018749
)
(Ig lambda-2 chain C regions;)
genome : 23,006,912 - 23,248,971 (242,060)
query : 1 - 872 (872/894)
4 exons
identity = 0.983
5'(0.974;0.993;0.974;0.978)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000039645
(
BC022823
)
(Ig lambda-2 chain C regions;)
genome : 23,029,196 - 23,248,969 (219,774)
query : 1 - 877 (877/895)
4 exons
identity = 0.986
5'(0.988;0.990;0.865;0.998)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000037355
(
BC015833
)
(Ig lambda-2 chain C regions;)
genome : 23,040,398 - 23,243,613 (203,216)
query : 5 - 887 (883/915)
4 exons
identity = 0.975
5'(1.000;0.956;0.844;0.996)3'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000054100
(
BC054883
)
(Ig lambda-2 chain C regions;)
genome : 23,054,864 - 23,248,963 (194,100)
query : 5 - 881 (877/910)
4 exons
identity = 0.954
5'(1.000;0.910;0.788;0.993)3'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000040434
(
BC028090
)
(Ig lambda-2 chain C regions;)
genome : 23,054,876 - 23,248,971 (194,096)
query : 12 - 883 (872/901)
4 exons
identity = 0.982
5'(1.000;0.993;0.786;0.996)3'
coverage = 0.988
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000033445
(
BC007782
)
(Ig lambda-1 chain C regions;)
genome : 23,054,889 - 23,238,284 (183,396)
query : 1 - 1,127 (1,127/1,145)
4 exons
identity = 0.955
5'(1.000;0.869;0.827;0.995)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000041186
(
BC030983
)
(Ig lambda-2 chain C regions;)
genome : 23,134,984 - 23,248,968 (113,985)
query : 1 - 886 (886/916)
4 exons
identity = 0.976
5'(1.000;0.965;0.825;0.993)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000041543
(
BC032452
)
(Ig lambda-2 chain C regions;)
genome : 23,154,254 - 23,248,971 (94,718)
query : 1 - 866 (866/890)
4 exons
identity = 0.976
5'(1.000;0.965;0.846;0.993)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000041802
(
BC033102
)
(Ig lambda-1 chain C regions;)
genome : 23,165,285 - 23,238,012 (72,728)
query : 1 - 876 (876/895)
4 exons
identity = 0.999
5'(1.000;0.997;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0016285
HIT000038772
(
BC020236
)
(Ig lambda-2 chain C regions;)
genome : 23,213,686 - 23,248,971 (35,286)
query : 1 - 895 (895/917)
4 exons
identity = 0.991
5'(1.000;0.981;0.950;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 27, cyto 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
HIX0203264
pHIT000095533 ( pHIT000095533 )
Representative transcript
(Conserved hypothetical protein.)
genome : 23,487,471 - 23,545,566 (58,096)
query : 1 - 2,286 (2,286/2,286)
13 exons
InterPro :
IPR001806 : Small GTPase superfamily
IPR003579 : Small GTPase superfamily, Rab type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0007264 : Biological Process : small GTPase mediated signal transduction
0015031 : Biological Process : protein transport
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203264)
CAGE tag :
H08BA13F1506
HIX0027844
HIT000583264 (
ENST00000479188
)
(Breakpoint cluster region protein; EC=2.7.11.1;)
genome : 23,521,891 - 23,603,615 (81,725)
query : 1 - 658 (658/658)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto_nucl 13, cyto 11, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027844)
HIX0027844
HIT000117163 (
ENST00000305877
)
(Breakpoint cluster region protein; EC=2.7.11.1; Renal carcinoma antigen NY-REN-26;)
genome : 23,522,397 - 23,660,224 (137,828)
query : 1 - 7,082 (7,082/7,082)
23 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 8.5, cyto_mito 8.16667, mito_pero 6.83333,
mito 6.5, plas 6, nucl 5, pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027844)
HIX0027844
HIT000201080 (
NM_004327
)
(Breakpoint cluster region protein; EC=2.7.11.1; Renal carcinoma antigen NY-REN-26;)
genome : 23,522,552 - 23,660,224 (137,673)
query : 1 - 6,927 (6,927/6,927)
23 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 8.5, cyto_mito 8.16667, mito_pero 6.83333,
mito 6.5, plas 6, nucl 5, pero 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027844)
HIX0027844
HIT000208356 (
NM_021574
)
(Breakpoint cluster region protein isoform 2.)
genome : 23,522,552 - 23,660,224 (137,673)
query : 1 - 6,795 (6,795/6,795)
22 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 8.5, cyto_mito 7.66667, mito_pero 6.83333,
plas 6, pero 6, mito 5.5, nucl 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027844)
HIX0027844
HIT000325302
(
Y00661
)
(Breakpoint cluster region protein isoform 2.)
genome : 23,522,552 - 23,658,137 (135,586)
query : 1 - 4,707 (4,707/4,714)
22 exons
identity = 0.992
5'(0.987;0.995;1.000;0.995;1.000;1.000;1.000;
1.000;0.992;0.994;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.993;1.000;1.000;
0.981)3'
coverage = 0.999
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000008 : C2 domain
IPR000198 : Rho GTPase-activating protein domain
IPR000219 : Dbl homology (DH) domain
IPR001331 : Guanine-nucleotide dissociation stimulator, CDC24, conserved site
IPR001849 : Pleckstrin homology domain
IPR008936 : Rho GTPase activation protein
IPR015123 : Bcr-Abl oncoprotein oligomerisation
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0005085 : Molecular Function : guanyl-nucleotide exchange factor activity
0005089 : Molecular Function : Rho guanyl-nucleotide exchange factor activity
0005096 : Molecular Function : GTPase activator activity
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0006468 : Biological Process : protein phosphorylation
0007165 : Biological Process : signal transduction
0035023 : Biological Process : regulation of Rho protein signal transduction
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 8.5, cyto_mito 7.66667, mito_pero 6.83333,
plas 6, pero 6, mito 5.5, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027844)
HIX0027844
HIT000313051 (
ENST00000359540
)
(Breakpoint cluster region protein isoform 2.)
genome : 23,522,552 - 23,658,137 (135,586)
query : 1 - 4,708 (4,708/4,708)
22 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 8.5, cyto_mito 7.66667, mito_pero 6.83333,
plas 6, pero 6, mito 5.5, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027844)
HIX0027844
HIT000481697 (
ENST00000398512
)
(Breakpoint cluster region protein; EC=2.7.11.1; Renal carcinoma antigen NY-REN-26;)
genome : 23,522,552 - 23,585,129 (62,578)
query : 1 - 2,000 (2,000/2,000)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027844)
HIX0027844
HIT000320935
(
X02596
)
Representative transcript
(Breakpoint cluster region protein; EC=2.7.11.1; Renal carcinoma antigen NY-REN-26;)
genome : 23,522,693 - 23,658,144 (135,452)
query : 30 - 4,739 (4,710/4,739)
23 exons
identity = 0.996
5'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.992;0.994;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.993;1.000;
1.000;0.983)3'
coverage = 0.994
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000008 : C2 domain
IPR000198 : Rho GTPase-activating protein domain
IPR000219 : Dbl homology (DH) domain
IPR001331 : Guanine-nucleotide dissociation stimulator, CDC24, conserved site
IPR001849 : Pleckstrin homology domain
IPR008936 : Rho GTPase activation protein
IPR015123 : Bcr-Abl oncoprotein oligomerisation
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0005085 : Molecular Function : guanyl-nucleotide exchange factor activity
0005089 : Molecular Function : Rho guanyl-nucleotide exchange factor activity
0005096 : Molecular Function : GTPase activator activity
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0006468 : Biological Process : protein phosphorylation
0007165 : Biological Process : signal transduction
0035023 : Biological Process : regulation of Rho protein signal transduction
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 8.5, cyto_mito 8.16667, mito_pero 6.83333,
mito 6.5, plas 6, nucl 5, pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027844)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB171453
Mus
sp. (Mouse) : BC131682
Oryzias
sp. (Medaka) : ENSORLT00000013382
Pongo
sp. (Orangutan) : ENSPPYT00000013491
Tetraodon
sp. (Tetraodon) : GSTENT00021594001
Takifugu
sp. (Fugu) : SINFRUT00000142958
Bos
sp. (Cow) : XM_001256513
Equus
sp. (Horse) : XM_001488505
Rattus
sp. (Rat) : XM_228091
Gallus
sp. (Chicken) : XM_415244
Danio
sp. (Zebrafish) : XM_683619
Danio
sp. (Zebrafish) : XM_691643
Canis
sp. (Dog) : XM_843561
Pan
sp. (Chimpanzee) : XR_025590
HIX0027844
HIT000262119
(
BC066122
)
(Breakpoint cluster region protein; EC=2.7.11.1; Renal carcinoma antigen NY-REN-26;)
genome : 23,522,725 - 23,658,136 (135,412)
query : 1 - 4,670 (4,670/4,686)
23 exons
identity = 0.998
5'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.994;1.000;1.000;0.990;1.000;
1.000;1.000;1.000;1.000;0.993;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000008 : C2 domain
IPR000219 : Dbl homology (DH) domain
IPR001331 : Guanine-nucleotide dissociation stimulator, CDC24, conserved site
IPR001849 : Pleckstrin homology domain
IPR015123 : Bcr-Abl oncoprotein oligomerisation
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0005085 : Molecular Function : guanyl-nucleotide exchange factor activity
0005089 : Molecular Function : Rho guanyl-nucleotide exchange factor activity
0005096 : Molecular Function : GTPase activator activity
0005515 : Molecular Function : protein binding
0006468 : Biological Process : protein phosphorylation
0007165 : Biological Process : signal transduction
0035023 : Biological Process : regulation of Rho protein signal transduction
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 16, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027844)
HIX0027844
HIT000329866
(
AB209991
)
(Breakpoint cluster region protein; EC=2.7.11.1; Renal carcinoma antigen NY-REN-26;)
genome : 23,522,806 - 23,658,142 (135,337)
query : 1 - 4,594 (4,594/4,594)
23 exons
identity = 0.997
5'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.994;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.993;1.000;
1.000;0.983)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000008 : C2 domain
IPR000198 : Rho GTPase-activating protein domain
IPR000219 : Dbl homology (DH) domain
IPR001331 : Guanine-nucleotide dissociation stimulator, CDC24, conserved site
IPR001849 : Pleckstrin homology domain
IPR008936 : Rho GTPase activation protein
IPR015123 : Bcr-Abl oncoprotein oligomerisation
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0005085 : Molecular Function : guanyl-nucleotide exchange factor activity
0005089 : Molecular Function : Rho guanyl-nucleotide exchange factor activity
0005096 : Molecular Function : GTPase activator activity
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0006468 : Biological Process : protein phosphorylation
0007165 : Biological Process : signal transduction
0035023 : Biological Process : regulation of Rho protein signal transduction
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 8.5, cyto_mito 8.16667, mito_pero 6.83333,
mito 6.5, plas 6, nucl 5, pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027844)
HIX0027844
HIT000484744
(
EU216065
)
(Breakpoint cluster region protein; EC=2.7.11.1; Renal carcinoma antigen NY-REN-26;)
genome : 23,523,148 - 23,631,803 (108,656)
query : 1 - 1,398 (1,398/1,398)
2 exons
identity = 0.991
5'(0.992;0.981)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR015123 : Bcr-Abl oncoprotein oligomerisation
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0005096 : Molecular Function : GTPase activator activity
0006468 : Biological Process : protein phosphorylation
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 18.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027844)
HIX0027844
HIT000484746
(
EU216067
)
(Breakpoint cluster region protein; EC=2.7.11.1; Renal carcinoma antigen NY-REN-26;)
genome : 23,523,148 - 23,629,465 (106,318)
query : 1 - 1,361 (1,361/1,377)
2 exons
identity = 0.990
5'(0.998;0.859)3'
coverage = 0.988
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR015123 : Bcr-Abl oncoprotein oligomerisation
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0005096 : Molecular Function : GTPase activator activity
0006468 : Biological Process : protein phosphorylation
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 18, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027844)
HIX0027844
HIT000484747
(
EU216068
)
(Breakpoint cluster region protein; EC=2.7.11.1; Renal carcinoma antigen NY-REN-26;)
genome : 23,523,148 - 23,615,915 (92,768)
query : 1 - 1,365 (1,365/1,365)
2 exons
identity = 0.988
5'(0.994;0.873)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR015123 : Bcr-Abl oncoprotein oligomerisation
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0005096 : Molecular Function : GTPase activator activity
0006468 : Biological Process : protein phosphorylation
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 18.5, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027844)
HIX0027844
HIT000484738
(
EU216059
)
(Breakpoint cluster region protein; EC=2.7.11.1; Renal carcinoma antigen NY-REN-26;)
genome : 23,523,148 - 23,603,622 (80,475)
query : 1 - 1,647 (1,647/1,674)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.984
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000219 : Dbl homology (DH) domain
IPR015123 : Bcr-Abl oncoprotein oligomerisation
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0005089 : Molecular Function : Rho guanyl-nucleotide exchange factor activity
0005096 : Molecular Function : GTPase activator activity
0006468 : Biological Process : protein phosphorylation
0007165 : Biological Process : signal transduction
0035023 : Biological Process : regulation of Rho protein signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 17.5, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027844)
HIX0027844
HIT000484740
(
EU216061
)
(Breakpoint cluster region protein; EC=2.7.11.1; Renal carcinoma antigen NY-REN-26;)
genome : 23,523,148 - 23,603,634 (80,487)
query : 1 - 1,659 (1,659/1,665)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.989)3'
coverage = 0.996
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000219 : Dbl homology (DH) domain
IPR015123 : Bcr-Abl oncoprotein oligomerisation
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0005089 : Molecular Function : Rho guanyl-nucleotide exchange factor activity
0005096 : Molecular Function : GTPase activator activity
0006468 : Biological Process : protein phosphorylation
0007165 : Biological Process : signal transduction
0035023 : Biological Process : regulation of Rho protein signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 17.5, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027844)
HIX0027844
HIT000484743
(
EU216064
)
(Breakpoint cluster region protein; EC=2.7.11.1; Renal carcinoma antigen NY-REN-26;)
genome : 23,523,148 - 23,603,182 (80,035)
query : 1 - 1,507 (1,507/1,575)
3 exons
identity = 0.999
5'(1.000;1.000;0.978)3'
coverage = 0.957
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR015123 : Bcr-Abl oncoprotein oligomerisation
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0005096 : Molecular Function : GTPase activator activity
0006468 : Biological Process : protein phosphorylation
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 18, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027844)
HIX0027844
HIT000484741
(
EU216062
)
(Breakpoint cluster region protein; EC=2.7.11.1; Renal carcinoma antigen NY-REN-26;)
genome : 23,523,148 - 23,603,209 (80,062)
query : 1 - 1,534 (1,534/1,545)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.993
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR015123 : Bcr-Abl oncoprotein oligomerisation
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0005096 : Molecular Function : GTPase activator activity
0006468 : Biological Process : protein phosphorylation
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 17.5, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027844)
HIX0027844
HIT000484749
(
EU216070
)
(Breakpoint cluster region protein; EC=2.7.11.1; Renal carcinoma antigen NY-REN-26;)
genome : 23,523,148 - 23,596,172 (73,025)
query : 1 - 1,467 (1,467/1,542)
2 exons
identity = 0.999
5'(1.000;0.995)3'
coverage = 0.951
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR015123 : Bcr-Abl oncoprotein oligomerisation
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0005096 : Molecular Function : GTPase activator activity
0006468 : Biological Process : protein phosphorylation
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto_nucl 17.5, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027844)
HIX0027844
HIT000484748
(
EU216069
)
(Breakpoint cluster region protein; EC=2.7.11.1; Renal carcinoma antigen NY-REN-26;)
genome : 23,523,148 - 23,585,129 (61,982)
query : 1 - 1,404 (1,404/1,404)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR015123 : Bcr-Abl oncoprotein oligomerisation
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0005096 : Molecular Function : GTPase activator activity
0006468 : Biological Process : protein phosphorylation
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027844)
HIX0027844
HIT000321446
(
X14676
)
(Breakpoint cluster region protein; EC=2.7.11.1; Renal carcinoma antigen NY-REN-26;)
genome : 23,524,231 - 23,596,020 (71,790)
query : 1 - 231 (231/231)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, extr 9, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027844)
HIX0027844
HIT000497865
(
AK303241
)
(Breakpoint cluster region protein; EC=2.7.11.1; Renal carcinoma antigen NY-REN-26;)
genome : 23,558,936 - 23,657,849 (98,914)
query : 1 - 2,986 (2,986/2,986)
23 exons
identity = 0.996
5'(1.000;0.951;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.994;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000008 : C2 domain
IPR000198 : Rho GTPase-activating protein domain
IPR000219 : Dbl homology (DH) domain
IPR001331 : Guanine-nucleotide dissociation stimulator, CDC24, conserved site
IPR001849 : Pleckstrin homology domain
IPR008936 : Rho GTPase activation protein
GO :
0005085 : Molecular Function : guanyl-nucleotide exchange factor activity
0005089 : Molecular Function : Rho guanyl-nucleotide exchange factor activity
0005515 : Molecular Function : protein binding
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
0035023 : Biological Process : regulation of Rho protein signal transduction
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 11.5, nucl 8.5, pero 4, E.R. 2,
golg 2, mito_pero 2, E.R._golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027844)
HIX0027844
HIT000007757
(
AK024483
)
(F-box/WD repeat-containing protein 4; Dactylin; F-box and WD-40 domain-containing protein 4;)
genome : 23,602,625 - 23,607,174 (4,550)
query : 1 - 4,534 (4,534/4,534)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 1.000
InterPro :
IPR001680 : WD40 repeat
IPR017986 : WD40-repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027844)
HIX0027844
HIT000255214
(
AY533677
)
(Breakpoint cluster region protein; EC=2.7.11.1; Renal carcinoma antigen NY-REN-26;)
genome : 23,603,136 - 23,627,301 (24,166)
query : 21 - 771 (751/771)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.992;1.000)3'
coverage = 0.974
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000219 : Dbl homology (DH) domain
IPR001331 : Guanine-nucleotide dissociation stimulator, CDC24, conserved site
GO :
0005085 : Molecular Function : guanyl-nucleotide exchange factor activity
0005089 : Molecular Function : Rho guanyl-nucleotide exchange factor activity
0035023 : Biological Process : regulation of Rho protein signal transduction
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 16, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027844)
HIX0027844
HIT000525725 (
ENST00000427791
)
(Breakpoint cluster region protein; EC=2.7.11.1; Renal carcinoma antigen NY-REN-26;)
genome : 23,603,136 - 23,627,301 (24,166)