bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0015635
HIT000505837 (
ENST00000407043
)
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4; EC=3.1.4.11; Phosphoinositide phospholipase C-beta-4; Phospholipase C-beta-4; PLC-beta-4;)
genome : 9,049,410 - 9,319,654 (270,245)
query : 1 - 614 (614/614)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 12, mito 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015635)
HIX0015635
HIT000539780 (
ENST00000441846
)
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4; EC=3.1.4.11; Phosphoinositide phospholipase C-beta-4; Phospholipase C-beta-4; PLC-beta-4;)
genome : 9,049,454 - 9,319,645 (270,192)
query : 1 - 505 (505/505)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 11, mito 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015635)
HIX0015635
HIT000654952 (
NM_001172646
)
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4; EC=3.1.4.11; Phosphoinositide phospholipase C-beta-4; Phospholipase C-beta-4; PLC-beta-4;)
genome : 9,049,701 - 9,461,461 (411,761)
query : 1 - 5,620 (5,620/5,640)
38 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto 12, cysk 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015635)
HIX0015635
HIT000128694 (
ENST00000334005
)
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4; EC=3.1.4.11; Phosphoinositide phospholipase C-beta-4; Phospholipase C-beta-4; PLC-beta-4;)
genome : 9,049,701 - 9,461,460 (411,760)
query : 1 - 5,620 (5,620/5,620)
38 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 13, cyto 10.5, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015635)
HIX0015635
HIT000359753 (
ENST00000378473
)
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4; EC=3.1.4.11; Phosphoinositide phospholipase C-beta-4; Phospholipase C-beta-4; PLC-beta-4;)
genome : 9,049,701 - 9,461,460 (411,760)
query : 1 - 5,619 (5,619/5,619)
38 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto 12, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015635)
HIX0015635
HIT000426703
(
AK307837
)
Representative transcript
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 isoform c.)
genome : 9,049,701 - 9,460,004 (410,304)
query : 1 - 4,164 (4,164/4,164)
38 exons
identity = 0.999
5'(1.000;1.000;0.990;1.000;1.000;1.000;1.000;
1.000;1.000;0.990;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.990;1.000;1.000;1.000;
1.000;1.000;1.000;0.990;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.998)3'
coverage = 1.000
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
InterPro :
IPR000008 : C2 domain
IPR001192 : Phosphoinositide phospholipase C family
IPR001711 : Phospholipase C, phosphatidylinositol-specific, Y domain
IPR009535 : Phosphatidylinositol-4, 5-bisphosphate phosphodiesterase beta, conserved site
IPR017946 : PLC-like phosphodiesterase, TIM beta/alpha-barrel domain
GO :
0004435 : Molecular Function : phosphatidylinositol phospholipase C activity
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0006629 : Biological Process : lipid metabolic process
0007165 : Biological Process : signal transduction
0008081 : Molecular Function : phosphoric diester hydrolase activity
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18.3333, nucl 16.5, cyto 15,
cyto_golg 8.66667, mito_nucl 8.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015635)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB174134
Mus
sp. (Mouse) : AF332072
Danio
sp. (Zebrafish) : ENSDART00000053894
Pongo
sp. (Orangutan) : ENSPPYT00000012434
Tetraodon
sp. (Tetraodon) : GSTENT00020283001
Bos
sp. (Cow) : L13936
Rattus
sp. (Rat) : L15556
Takifugu
sp. (Fugu) : SINFRUT00000148829
Pan
sp. (Chimpanzee) : XM_001168182
Gallus
sp. (Chicken) : XM_001231683
Monodelphis
sp. (Opossum) : XM_001382090
Equus
sp. (Horse) : XM_001493499
Canis
sp. (Dog) : XM_534349
HIX0015635
HIT000535437 (
ENST00000437503
)
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4; EC=3.1.4.11; Phosphoinositide phospholipase C-beta-4; Phospholipase C-beta-4; PLC-beta-4;)
genome : 9,049,748 - 9,318,715 (268,968)
query : 1 - 466 (466/484)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.963
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, extr 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015635)
HIX0015635
HIT000426348
(
AK307482
)
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4; EC=3.1.4.11; Phosphoinositide phospholipase C-beta-4; Phospholipase C-beta-4; PLC-beta-4;)
genome : 9,049,792 - 9,438,082 (388,291)
query : 1 - 3,122 (3,122/3,122)
32 exons
identity = 1.000
5'(1.000;1.000;0.990;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
InterPro :
IPR000008 : C2 domain
IPR000909 : Phospholipase C, phosphatidylinositol-specific , X domain
IPR001192 : Phosphoinositide phospholipase C family
IPR001711 : Phospholipase C, phosphatidylinositol-specific, Y domain
IPR009535 : Phosphatidylinositol-4, 5-bisphosphate phosphodiesterase beta, conserved site
IPR011992 : EF-hand domain pair
IPR015359 : Phospholipase C, phosphoinositol-specific, EF-hand-like
IPR017946 : PLC-like phosphodiesterase, TIM beta/alpha-barrel domain
GO :
0004435 : Molecular Function : phosphatidylinositol phospholipase C activity
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0006629 : Biological Process : lipid metabolic process
0007165 : Biological Process : signal transduction
0008081 : Molecular Function : phosphoric diester hydrolase activity
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 13.5, cyto_mito 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015635)
HIX0015635
pHIT000035234 ( pHIT000035234 )
(Hypothetical short protein.)
genome : 9,049,886 - 9,078,846 (28,961)
query : 1 - 171 (171/171)
3 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015635)
CAGE tag :
H37BA19O1309
HIX0015635
HIT000514770 (
ENST00000416836
)
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4; EC=3.1.4.11; Phosphoinositide phospholipase C-beta-4; Phospholipase C-beta-4; PLC-beta-4;)
genome : 9,147,005 - 9,317,854 (170,850)
query : 1 - 582 (582/595)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.978
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26.5, cyto_nucl 14.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015635)
HIX0015635
HIT000042572
(
AK122699
)
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 isoform c.)
genome : 9,177,241 - 9,417,681 (240,441)
query : 1 - 2,841 (2,841/2,841)
29 exons
identity = 0.999
5'(1.000;1.000;0.990;0.988;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
InterPro :
IPR000008 : C2 domain
IPR000909 : Phospholipase C, phosphatidylinositol-specific , X domain
IPR001192 : Phosphoinositide phospholipase C family
IPR001711 : Phospholipase C, phosphatidylinositol-specific, Y domain
IPR011992 : EF-hand domain pair
IPR015359 : Phospholipase C, phosphoinositol-specific, EF-hand-like
IPR017946 : PLC-like phosphodiesterase, TIM beta/alpha-barrel domain
GO :
0004435 : Molecular Function : phosphatidylinositol phospholipase C activity
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0006629 : Biological Process : lipid metabolic process
0007165 : Biological Process : signal transduction
0008081 : Molecular Function : phosphoric diester hydrolase activity
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.1667, nucl 14, cyto 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015635)
HIX0015635
HIT000318807 (
NM_182797
)
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4; EC=3.1.4.11; Phosphoinositide phospholipase C-beta-4; Phospholipase C-beta-4; PLC-beta-4;)
genome : 9,198,037 - 9,461,461 (263,425)
query : 1 - 5,431 (5,431/5,451)
36 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto 12, cysk 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015635)
HIX0015635
HIT000111742 (
ENST00000278655
)
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4; EC=3.1.4.11; Phosphoinositide phospholipase C-beta-4; Phospholipase C-beta-4; PLC-beta-4;)
genome : 9,198,037 - 9,461,460 (263,424)
query : 1 - 5,430 (5,430/5,430)
36 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto 12, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015635)
HIX0015635
HIT000387746
(
BC117458
)
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4; EC=3.1.4.11; Phosphoinositide phospholipase C-beta-4; Phospholipase C-beta-4; PLC-beta-4;)
genome : 9,288,447 - 9,459,676 (171,230)
query : 19 - 3,601 (3,583/3,601)
35 exons
identity = 1.000
5'(0.990;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.995
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
InterPro :
IPR000008 : C2 domain
IPR000909 : Phospholipase C, phosphatidylinositol-specific , X domain
IPR001192 : Phosphoinositide phospholipase C family
IPR001711 : Phospholipase C, phosphatidylinositol-specific, Y domain
IPR009535 : Phosphatidylinositol-4, 5-bisphosphate phosphodiesterase beta, conserved site
IPR011992 : EF-hand domain pair
IPR015359 : Phospholipase C, phosphoinositol-specific, EF-hand-like
IPR017946 : PLC-like phosphodiesterase, TIM beta/alpha-barrel domain
GO :
0004435 : Molecular Function : phosphatidylinositol phospholipase C activity
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0006629 : Biological Process : lipid metabolic process
0007165 : Biological Process : signal transduction
0008081 : Molecular Function : phosphoric diester hydrolase activity
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 13.5, cyto_mito 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015635)
HIX0015635
HIT000502309
(
BC143868
)
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4; EC=3.1.4.11; Phosphoinositide phospholipase C-beta-4; Phospholipase C-beta-4; PLC-beta-4;)
genome : 9,288,447 - 9,459,676 (171,230)
query : 19 - 3,601 (3,583/3,601)
35 exons
identity = 1.000
5'(0.990;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.995
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
InterPro :
IPR000008 : C2 domain
IPR000909 : Phospholipase C, phosphatidylinositol-specific , X domain
IPR001192 : Phosphoinositide phospholipase C family
IPR001711 : Phospholipase C, phosphatidylinositol-specific, Y domain
IPR009535 : Phosphatidylinositol-4, 5-bisphosphate phosphodiesterase beta, conserved site
IPR011992 : EF-hand domain pair
IPR015359 : Phospholipase C, phosphoinositol-specific, EF-hand-like
IPR017946 : PLC-like phosphodiesterase, TIM beta/alpha-barrel domain
GO :
0004435 : Molecular Function : phosphatidylinositol phospholipase C activity
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0006629 : Biological Process : lipid metabolic process
0007165 : Biological Process : signal transduction
0008081 : Molecular Function : phosphoric diester hydrolase activity
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 13.5, cyto_mito 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015635)
HIX0015635
HIT000359773 (
ENST00000378493
)
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4; EC=3.1.4.11; Phosphoinositide phospholipase C-beta-4; Phospholipase C-beta-4; PLC-beta-4;)
genome : 9,288,447 - 9,461,889 (173,443)
query : 1 - 5,796 (5,796/5,796)
35 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto 12, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015635)
HIX0015635
HIT000359781 (
ENST00000378501
)
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4; EC=3.1.4.11; Phosphoinositide phospholipase C-beta-4; Phospholipase C-beta-4; PLC-beta-4;)
genome : 9,288,447 - 9,461,889 (173,443)
query : 1 - 5,833 (5,833/5,833)
36 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 13, cyto 10.5, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015635)
HIX0015635
HIT000596111 (
ENST00000492632
)
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 isoform a.)
genome : 9,288,447 - 9,461,889 (173,443)
query : 1 - 5,657 (5,657/5,657)
35 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, nucl 12, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015635)
HIX0015635
HIT000197941 (
NM_000933
)
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4; EC=3.1.4.11; Phosphoinositide phospholipase C-beta-4; Phospholipase C-beta-4; PLC-beta-4;)
genome : 9,288,447 - 9,461,461 (173,015)
query : 1 - 5,405 (5,405/5,425)
36 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 13, cyto 10.5, cysk 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015635)
HIX0015635
HIT000057327
(
BX648680
)
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4; EC=3.1.4.11; Phosphoinositide phospholipase C-beta-4; Phospholipase C-beta-4; PLC-beta-4;)
genome : 9,319,601 - 9,460,003 (140,403)
query : 1 - 3,647 (3,647/3,667)
33 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.991;
1.000;1.000;1.000;0.988;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.998)3'
coverage = 0.999
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
InterPro :
IPR000008 : C2 domain
IPR000909 : Phospholipase C, phosphatidylinositol-specific , X domain
IPR001192 : Phosphoinositide phospholipase C family
IPR001711 : Phospholipase C, phosphatidylinositol-specific, Y domain
IPR009535 : Phosphatidylinositol-4, 5-bisphosphate phosphodiesterase beta, conserved site
IPR011992 : EF-hand domain pair
IPR015359 : Phospholipase C, phosphoinositol-specific, EF-hand-like
IPR017946 : PLC-like phosphodiesterase, TIM beta/alpha-barrel domain
GO :
0004435 : Molecular Function : phosphatidylinositol phospholipase C activity
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0006629 : Biological Process : lipid metabolic process
0007165 : Biological Process : signal transduction
0008081 : Molecular Function : phosphoric diester hydrolase activity
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, nucl 8, mito 2, pero 2, mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015635)
HIX0015635
HIT000568962 (
ENST00000464199
)
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4; EC=3.1.4.11; Phosphoinositide phospholipase C-beta-4; Phospholipase C-beta-4; PLC-beta-4;)
genome : 9,351,581 - 9,461,889 (110,309)
query : 1 - 5,558 (5,558/5,558)
29 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 6.5, cyto_nucl 4.5, pero 2, nucl 1.5,
E.R. 1.5, E.R._golg 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015635)
HIX0015635
HIT000193761
(
L41349
)
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4; EC=3.1.4.11; Phosphoinositide phospholipase C-beta-4; Phospholipase C-beta-4; PLC-beta-4;)
genome : 9,351,581 - 9,460,047 (108,467)
query : 1 - 3,707 (3,707/3,707)
29 exons
identity = 0.990
5'(0.983;1.000;1.000;1.000;1.000;0.989;1.000;
1.000;0.967;1.000;1.000;0.993;1.000;1.000;
1.000;0.981;0.994;0.990;0.978;0.987;1.000;
1.000;0.991;0.961;0.989;1.000;1.000;1.000;
0.977)3'
coverage = 1.000
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
InterPro :
IPR000008 : C2 domain
IPR000909 : Phospholipase C, phosphatidylinositol-specific , X domain
IPR001192 : Phosphoinositide phospholipase C family
IPR001711 : Phospholipase C, phosphatidylinositol-specific, Y domain
IPR009535 : Phosphatidylinositol-4, 5-bisphosphate phosphodiesterase beta, conserved site
IPR011992 : EF-hand domain pair
IPR015359 : Phospholipase C, phosphoinositol-specific, EF-hand-like
IPR017946 : PLC-like phosphodiesterase, TIM beta/alpha-barrel domain
GO :
0004435 : Molecular Function : phosphatidylinositol phospholipase C activity
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0006629 : Biological Process : lipid metabolic process
0007165 : Biological Process : signal transduction
0008081 : Molecular Function : phosphoric diester hydrolase activity
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 6.5, cyto_nucl 4.5, pero 2, nucl 1.5,
E.R. 1.5, E.R._golg 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015635)
HIX0015635
HIT000577493 (
ENST00000473151
)
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4; EC=3.1.4.11; Phosphoinositide phospholipase C-beta-4; Phospholipase C-beta-4; PLC-beta-4;)
genome : 9,351,609 - 9,461,889 (110,281)
query : 1 - 5,472 (5,472/5,472)
28 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 14, cyto 12.5, cysk 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015635)
HIX0015635
HIT000586074 (
ENST00000482123
)
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 isoform c.)
genome : 9,351,609 - 9,461,889 (110,281)
query : 1 - 5,508 (5,508/5,508)
29 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 19, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015635)
HIX0015635
HIT000512613 (
ENST00000414679
)
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 isoform a.)
genome : 9,351,859 - 9,461,889 (110,031)
query : 10 - 5,325 (5,316/5,325)
30 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.998
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto_nucl 10.5, cyto 10, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015635)
HIX0015635
HIT000008301
(
AK025027
)
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4; EC=3.1.4.11; Phosphoinositide phospholipase C-beta-4; Phospholipase C-beta-4; PLC-beta-4;)
genome : 9,351,862 - 9,417,682 (65,821)
query : 1 - 2,107 (2,107/2,123)
20 exons
identity = 0.999
5'(1.000;0.990;1.000;1.000;1.000;1.000;1.000;
0.988;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
InterPro :
IPR000008 : C2 domain
IPR000909 : Phospholipase C, phosphatidylinositol-specific , X domain
IPR001192 : Phosphoinositide phospholipase C family
IPR001711 : Phospholipase C, phosphatidylinositol-specific, Y domain
IPR011992 : EF-hand domain pair
IPR015359 : Phospholipase C, phosphoinositol-specific, EF-hand-like
IPR017946 : PLC-like phosphodiesterase, TIM beta/alpha-barrel domain
GO :
0004435 : Molecular Function : phosphatidylinositol phospholipase C activity
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0006629 : Biological Process : lipid metabolic process
0007165 : Biological Process : signal transduction
0008081 : Molecular Function : phosphoric diester hydrolase activity
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 15, nucl 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015635)
HIX0015635
HIT000011368
(
AK054754
)
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 isoform a.)
genome : 9,457,946 - 9,459,948 (2,003)
query : 1 - 2,003 (2,003/2,003)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, extr 5, nucl 4.5, cyto_nucl 3.5, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015635)
HIX0015635
HIT000014246
(
AK057634
)
(Conserved hypothetical protein.)
genome : 9,458,568 - 9,461,120 (2,553)
query : 1 - 2,552 (2,552/2,552)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 9, cysk 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015635)
HIX0015635
HIT000024795
(
AL117633
)
(Hypothetical short protein.)
genome : 9,459,816 - 9,461,461 (1,646)
query : 10 - 1,655 (1,646/1,675)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, extr 5, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015635)
HIX0015636
HIT000021119
(
AK096264
)
Representative transcript
(Conserved hypothetical protein.)
genome : 9,485,827 - 9,495,645 (9,819)
query : 1 - 1,928 (1,928/1,928)
5 exons
identity = 0.998
3'(0.998;1.000;1.000;0.997;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, extr 6, cyto 5, cyto_nucl 4.33333,
cyto_pero 3.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015636)
HIX0015636
HIT000541403 (
ENST00000443469
)
(Conserved hypothetical protein.)
genome : 9,485,827 - 9,495,645 (9,819)
query : 1 - 1,928 (1,928/1,928)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, extr 6, cyto_nucl 4.66667, cyto 4.5,
cyto_pero 3.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015636)
HIX0203067
HIT000204042 (
NM_012261
)
(Lysosome-associated membrane glycoprotein 5; Brain and dendritic cell-associated LAMP; Brain-associated LAMP-like protein; BAD-LAMP; Lysosome-associated membrane protein 5; LAMP-5; Precursor;)
genome : 9,495,005 - 9,511,171 (16,167)
query : 1 - 2,042 (2,042/2,059)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 14, extr 6, cyto 5, extr_plas 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203067)
HIX0203067
HIT000656716 (
NM_001199897
)
(Lysosome-associated membrane glycoprotein 5; Brain and dendritic cell-associated LAMP; Brain-associated LAMP-like protein; BAD-LAMP; Lysosome-associated membrane protein 5; LAMP-5; Precursor;)
genome : 9,495,005 - 9,511,171 (16,167)
query : 1 - 1,910 (1,910/1,927)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 13, cyto 7, extr 5, plas 4, cyto_nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203067)
HIX0203067
HIT000499727
(
AK316114
)
(Lysosome-associated membrane glycoprotein 5; Brain and dendritic cell-associated LAMP; Brain-associated LAMP-like protein; BAD-LAMP; Lysosome-associated membrane protein 5; LAMP-5; Precursor;)
genome : 9,495,005 - 9,510,570 (15,566)
query : 1 - 1,309 (1,309/1,309)
5 exons
identity = 0.998
5'(0.996;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002000 : Lysosome-associated membrane glycoprotein
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 13, cyto 7, extr 5, plas 4, cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203067)
HIX0203067
HIT000489960
(
AK295336
)
(Lysosome-associated membrane glycoprotein 5 isoform 2 precursor.)
genome : 9,495,005 - 9,510,499 (15,495)
query : 1 - 1,238 (1,238/1,238)
5 exons
identity = 0.998
5'(0.998;1.000;1.000;1.000;0.995)3'
coverage = 1.000
InterPro :
IPR002000 : Lysosome-associated membrane glycoprotein
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 13, extr 6, cyto 6, plas 4, E.R. 1.5,
E.R._mito 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203067)
HIX0203067
HIT000105627 (
ENST00000246070
)
(Lysosome-associated membrane glycoprotein 5; Brain and dendritic cell-associated LAMP; Brain-associated LAMP-like protein; BAD-LAMP; Lysosome-associated membrane protein 5; LAMP-5; Precursor;)
genome : 9,495,008 - 9,511,171 (16,164)
query : 1 - 2,039 (2,039/2,039)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 14, extr 6, cyto 5, extr_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203067)
HIX0203067
HIT000525496 (
ENST00000427562
)
(Lysosome-associated membrane glycoprotein 5; Brain and dendritic cell-associated LAMP; Brain-associated LAMP-like protein; BAD-LAMP; Lysosome-associated membrane protein 5; LAMP-5; Precursor;)
genome : 9,495,271 - 9,511,171 (15,901)
query : 1 - 1,644 (1,644/1,644)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 13, cyto 7, extr 5, plas 4, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203067)
HIX0203067
HIT000250280
(
AL121740
)
Representative transcript
(Lysosome-associated membrane glycoprotein 5; Brain and dendritic cell-associated LAMP; Brain-associated LAMP-like protein; BAD-LAMP; Lysosome-associated membrane protein 5; LAMP-5; Precursor;)
genome : 9,495,298 - 9,511,171 (15,874)
query : 1 - 1,749 (1,749/1,749)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002000 : Lysosome-associated membrane glycoprotein
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 14, extr 6, cyto 5, extr_plas 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203067)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB171964
Mus
sp. (Mouse) : AK018222
Rattus
sp. (Rat) : BC087680
Bos
sp. (Cow) : BC123658
Gallus
sp. (Chicken) : BX933313
Pongo
sp. (Orangutan) : CR860751
Equus
sp. (Horse) : ENSECAT00000009636
Oryzias
sp. (Medaka) : ENSORLT00000012006
Tetraodon
sp. (Tetraodon) : GSTENT00020285001
Takifugu
sp. (Fugu) : SINFRUT00000148857
Monodelphis
sp. (Opossum) : XM_001382089
Pan
sp. (Chimpanzee) : XM_514512
Canis
sp. (Dog) : XM_845541
HIX0203067
HIT000053576
(
BC050727
)
(Lysosome-associated membrane glycoprotein 5; Brain and dendritic cell-associated LAMP; Brain-associated LAMP-like protein; BAD-LAMP; Lysosome-associated membrane protein 5; LAMP-5; Precursor;)
genome : 9,495,302 - 9,511,171 (15,870)
query : 1 - 1,745 (1,745/1,762)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR002000 : Lysosome-associated membrane glycoprotein
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 14, extr 6, cyto 5, extr_plas 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203067)
HIX0015637
HIT000359709 (
ENST00000378429
)
(Serine/threonine-protein kinase PAK 7; EC=2.7.11.1; p21-activated kinase 5; PAK-5; p21-activated kinase 7; PAK-7;)
genome : 9,518,036 - 9,819,689 (301,654)
query : 1 - 4,780 (4,780/4,780)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 18.5, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015637)
HIX0015637
HIT000308360 (
ENST00000353224
)
(Serine/threonine-protein kinase PAK 7; EC=2.7.11.1; p21-activated kinase 5; PAK-5; p21-activated kinase 7; PAK-7;)
genome : 9,518,036 - 9,819,515 (301,480)
query : 1 - 4,500 (4,500/4,500)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 18.5, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015637)
HIX0015637
HIT000359703 (
ENST00000378423
)
(Serine/threonine-protein kinase PAK 7; EC=2.7.11.1; p21-activated kinase 5; PAK-5; p21-activated kinase 7; PAK-7;)
genome : 9,518,036 - 9,819,479 (301,444)
query : 1 - 4,613 (4,613/4,613)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 18.5, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015637)
HIX0015637
HIT000250287
(
AL133002
)
(Serine/threonine-protein kinase PAK 7; EC=2.7.11.1; p21-activated kinase 5; PAK-5; p21-activated kinase 7; PAK-7;)
genome : 9,518,036 - 9,525,141 (7,106)
query : 1 - 2,490 (2,490/2,490)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR028754 : Serine/threonine-protein kinase PAK7
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0006915 : Biological Process : apoptotic process
0007010 : Biological Process : cytoskeleton organization
0016049 : Biological Process : cell growth
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 15.5, nucl 4.5, mito 2, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015637)
HIX0015637
HIT000207860 (
NM_020341
)
(Serine/threonine-protein kinase PAK 7; EC=2.7.11.1; p21-activated kinase 5; PAK-5; p21-activated kinase 7; PAK-7;)
genome : 9,518,037 - 9,819,687 (301,651)
query : 1 - 4,777 (4,777/4,777)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 18.5, cyto 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015637)
HIX0015637
HIT000215529 (
NM_177990
)
(Serine/threonine-protein kinase PAK 7; EC=2.7.11.1; p21-activated kinase 5; PAK-5; p21-activated kinase 7; PAK-7;)
genome : 9,518,037 - 9,819,687 (301,651)
query : 1 - 4,671 (4,671/4,671)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 18.5, cyto 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015637)
HIX0015637
HIT000059295
(
AB040812
)
(Serine/threonine-protein kinase PAK 7; EC=2.7.11.1; p21-activated kinase 5; PAK-5; p21-activated kinase 7; PAK-7;)
genome : 9,518,037 - 9,819,479 (301,443)
query : 1 - 4,612 (4,612/4,612)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000095 : CRIB domain
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR028754 : Serine/threonine-protein kinase PAK7
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
0006915 : Biological Process : apoptotic process
0007010 : Biological Process : cytoskeleton organization
0016049 : Biological Process : cell growth
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 18.5, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015637)
HIX0015637
HIT000000980
(
AB033090
)
Representative transcript
(Serine/threonine-protein kinase PAK 7; EC=2.7.11.1; p21-activated kinase 5; PAK-5; p21-activated kinase 7; PAK-7;)
genome : 9,518,038 - 9,819,689 (301,652)
query : 1 - 4,777 (4,777/4,777)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.996)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 18.5, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015637)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK079080
Danio
sp. (Zebrafish) : ENSDART00000103775
Equus
sp. (Horse) : ENSECAT00000021562
Macaca
sp. (Macaque) : ENSMMUT00000004632
Oryzias
sp. (Medaka) : ENSORLT00000011995
Pongo
sp. (Orangutan) : ENSPPYT00000012437
Pan
sp. (Chimpanzee) : ENSPTRT00000024623
Tetraodon
sp. (Tetraodon) : GSTENT00020286001
Takifugu
sp. (Fugu) : SINFRUT00000173675
Rattus
sp. (Rat) : XM_001080088
Bos
sp. (Cow) : XM_001251382
Monodelphis
sp. (Opossum) : XM_001382088
Canis
sp. (Dog) : XM_542895
HIX0015637
HIT000039750
(
BC024179
)
(Serine/threonine-protein kinase PAK 7; EC=2.7.11.1; p21-activated kinase 5; PAK-5; p21-activated kinase 7; PAK-7;)
genome : 9,519,751 - 9,819,515 (299,765)
query : 12 - 2,796 (2,785/2,811)
10 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000;0.998;1.000;
0.995;1.000;0.981)5'
coverage = 0.996
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000095 : CRIB domain
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR028754 : Serine/threonine-protein kinase PAK7
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
0006915 : Biological Process : apoptotic process
0007010 : Biological Process : cytoskeleton organization
0016049 : Biological Process : cell growth
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 18.5, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015637)
HIX0015637
HIT000020529
(
AK095674
)
(Serine/threonine-protein kinase PAK 7; EC=2.7.11.1; p21-activated kinase 5; PAK-5; p21-activated kinase 7; PAK-7;)
genome : 9,519,752 - 9,819,680 (299,929)
query : 1 - 2,593 (2,593/2,593)
9 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.995;0.993;
1.000;0.985)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR028754 : Serine/threonine-protein kinase PAK7
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0006915 : Biological Process : apoptotic process
0007010 : Biological Process : cytoskeleton organization
0016049 : Biological Process : cell growth
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 15.5, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015637)
HIX0015637
HIT000424198
(
AK291401
)
(Serine/threonine-protein kinase PAK 7; EC=2.7.11.1; p21-activated kinase 5; PAK-5; p21-activated kinase 7; PAK-7;)
genome : 9,519,752 - 9,819,518 (299,767)
query : 1 - 2,787 (2,787/2,787)
10 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.993;0.998;1.000;
1.000;0.987;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000095 : CRIB domain
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR028754 : Serine/threonine-protein kinase PAK7
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
0006915 : Biological Process : apoptotic process
0007010 : Biological Process : cytoskeleton organization
0016049 : Biological Process : cell growth
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 18.5, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015637)
HIX0015637
HIT000426792
(
AK307926
)
(Serine/threonine-protein kinase PAK 7; EC=2.7.11.1; p21-activated kinase 5; PAK-5; p21-activated kinase 7; PAK-7;)
genome : 9,519,865 - 9,819,616 (299,752)
query : 3 - 2,773 (2,771/2,773)
10 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.998;1.000;
0.995;1.000;1.000)5'
coverage = 0.999
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000095 : CRIB domain
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR028754 : Serine/threonine-protein kinase PAK7
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
0006915 : Biological Process : apoptotic process
0007010 : Biological Process : cytoskeleton organization
0016049 : Biological Process : cell growth
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 18.5, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015637)
HIX0015637
HIT000434686
(
AK315820
)
(Serine/threonine-protein kinase PAK 7; EC=2.7.11.1; p21-activated kinase 5; PAK-5; p21-activated kinase 7; PAK-7;)
genome : 9,519,885 - 9,819,687 (299,803)
query : 2 - 2,824 (2,823/2,824)
10 exons
identity = 0.999
3'(1.000;1.000;1.000;0.992;1.000;1.000;1.000;
1.000;0.993;1.000)5'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000095 : CRIB domain
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
IPR028754 : Serine/threonine-protein kinase PAK7
GO :
0004672 : Molecular Function : protein kinase activity
0004674 : Molecular Function : protein serine/threonine kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
0006915 : Biological Process : apoptotic process
0007010 : Biological Process : cytoskeleton organization
0016049 : Biological Process : cell growth
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 18.5, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015637)
HIX0174870
HIT000526703 (
ENST00000428769
)
(Hypothetical short protein.)
genome : 9,556,255 - 9,558,336 (2,082)
query : 1 - 465 (465/465)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174870)
HIX0022712
HIT000016443
(
AK091576
)
Representative transcript
(Conserved hypothetical protein.)
genome : 9,748,764 - 9,751,753 (2,990)
query : 1 - 2,990 (2,990/2,990)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27.5, extr_plas 14.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022712)
HIX0226939
HIT000547204 (
ENST00000449270
)
(Conserved hypothetical protein.)
genome : 9,966,736 - 9,987,764 (21,029)
query : 1 - 1,036 (1,036/1,036)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226939)
HIX0040636
HIT000071223
(
AF143323
)
Representative transcript
(Conserved hypothetical protein.)
genome : 10,002,623 - 10,004,019 (1,397)
query : 1 - 1,395 (1,395/1,399)
1 exon
identity = 0.991
5'(0.991)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 11.5, cyto_nucl 7.33333, cyto 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040636)
HIX0027713
HIT000726210 (
NR_040710
)
(Conserved hypothetical protein.)
genome : 10,004,460 - 10,200,154 (195,695)
query : 1 - 2,959 (2,959/2,959)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027713)
HIX0027713
HIT000044834
(
AK124961
)
Representative transcript
(Conserved hypothetical protein.)
genome : 10,004,460 - 10,200,151 (195,692)
query : 1 - 2,956 (2,956/2,956)
5 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027713)
HIX0027713
HIT000536580 (
ENST00000438646
)
(Hypothetical short protein.)
genome : 10,006,264 - 10,015,972 (9,709)
query : 1 - 824 (824/824)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027713)
HIX0027713
HIT000519077 (
ENST00000421143
)
(Hypothetical protein.)
genome : 10,006,723 - 10,177,590 (170,868)
query : 1 - 808 (808/808)
3 exons
identity = 0.999
3'(1.000;1.000;0.992)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027713)
HIX0015638
HIT000359672 (
ENST00000378392
)
(Ankyrin repeat and EF-hand domain-containing protein 1; Ankyrin repeat domain-containing protein 5;)
genome : 10,015,689 - 10,036,470 (20,782)
query : 1 - 2,894 (2,894/2,894)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_plas 11.3333, cyto_golg 11.3333, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015638)
HIX0015638
HIT000208596 (
NM_022096
)
(Ankyrin repeat and EF-hand domain-containing protein 1; Ankyrin repeat domain-containing protein 5;)
genome : 10,015,697 - 10,037,406 (21,710)
query : 1 - 3,822 (3,822/3,839)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_plas 11.3333, cyto_golg 11.3333, nucl 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015638)
HIX0015638
HIT000319490 (
NM_198798
)
(Ankyrin repeat and EF-hand domain-containing protein 1; Ankyrin repeat domain-containing protein 5;)
genome : 10,015,697 - 10,037,406 (21,710)
query : 1 - 3,758 (3,758/3,775)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_plas 11.3333, cyto_golg 11.3333, nucl 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015638)
HIX0015638
HIT000359660 (
ENST00000378380
)
(Ankyrin repeat and EF-hand domain-containing protein 1; Ankyrin repeat domain-containing protein 5;)
genome : 10,015,697 - 10,037,410 (21,714)
query : 1 - 3,762 (3,762/3,762)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_plas 11.3333, cyto_golg 11.3333, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015638)
HIX0015638
HIT000022543
(
AK097689
)
Representative transcript
(Ankyrin repeat and EF-hand domain-containing protein 1; Ankyrin repeat domain-containing protein 5;)
genome : 10,015,714 - 10,036,469 (20,756)
query : 1 - 2,804 (2,804/2,804)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002048 : EF-hand domain
IPR002110 : Ankyrin repeat
IPR011992 : EF-hand domain pair
IPR020683 : Ankyrin repeat-containing domain
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_plas 11.3333, cyto_golg 11.3333, nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015638)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB072772
Mus
sp. (Mouse) : AK029804
Pongo
sp. (Orangutan) : CR859435
Canis
sp. (Dog) : ENSCAFT00000009128
Equus
sp. (Horse) : ENSECAT00000012569
Gallus
sp. (Chicken) : ENSGALT00000014632
Monodelphis
sp. (Opossum) : ENSMODT00000005993
Oryzias
sp. (Medaka) : ENSORLT00000020200
Tetraodon
sp. (Tetraodon) : GSTENT00035502001
Danio
sp. (Zebrafish) : NM_001025543
Takifugu
sp. (Fugu) : SINFRUT00000155504
Rattus
sp. (Rat) : XM_001081280
Bos
sp. (Cow) : XM_001255789
Pan
sp. (Chimpanzee) : XM_514513
HIX0015638
HIT000039671
(
BC022878
)
(Ankyrin repeat and EF-hand domain-containing protein 1; Ankyrin repeat domain-containing protein 5;)
genome : 10,015,737 - 10,036,470 (20,734)
query : 1 - 2,846 (2,846/2,862)
11 exons
identity = 0.999
5'(0.992;1.000;0.995;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002048 : EF-hand domain
IPR002110 : Ankyrin repeat
IPR011992 : EF-hand domain pair
IPR020683 : Ankyrin repeat-containing domain
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 15.6667, cyto_mito 10.6667,
cyto_plas 10.1667, nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015638)
HIX0015638
HIT000091532
(
BC028189
)
(Ankyrin repeat and EF-hand domain-containing protein 1.)
genome : 10,015,765 - 10,036,472 (20,708)
query : 1 - 2,802 (2,802/2,826)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;0.995;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002048 : EF-hand domain
IPR002110 : Ankyrin repeat
IPR011992 : EF-hand domain pair
IPR020683 : Ankyrin repeat-containing domain
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, nucl 5, mito 5, mito_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015638)
HIX0015638
HIT000592608 (
ENST00000488991
)
(Ankyrin repeat and EF-hand domain-containing protein 1.)
genome : 10,015,765 - 10,036,475 (20,711)
query : 1 - 2,805 (2,805/2,805)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, nucl 5, mito 5, mito_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015638)
HIX0015638
HIT000087666
(
BC011591
)
(Ankyrin repeat and EF-hand domain-containing protein 1.)
genome : 10,015,770 - 10,030,481 (14,712)
query : 1 - 1,520 (1,520/1,537)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002048 : EF-hand domain
IPR002110 : Ankyrin repeat
IPR011992 : EF-hand domain pair
IPR020683 : Ankyrin repeat-containing domain
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 15, nucl 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015638)
HIX0015638
HIT000008596
(
AK025322
)
(Ankyrin repeat and EF-hand domain-containing protein 1.)
genome : 10,030,202 - 10,037,406 (7,205)
query : 1 - 2,457 (2,457/2,474)
5 exons
identity = 0.994
5'(1.000;1.000;1.000;0.993;0.990)3'
coverage = 1.000
InterPro :
IPR002048 : EF-hand domain
IPR002110 : Ankyrin repeat
IPR011992 : EF-hand domain pair
IPR020683 : Ankyrin repeat-containing domain
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 15.5, nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015638)
HIX0015638
HIT000015243
(
AK074463
)
(Ankyrin repeat and EF-hand domain-containing protein 1.)
genome : 10,030,792 - 10,037,406 (6,615)
query : 1 - 1,863 (1,863/1,884)
5 exons
identity = 0.992
5'(1.000;0.996;1.000;1.000;0.990)3'
coverage = 1.000
InterPro :
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 12, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015638)
HIX0027713
pHIT000094771 ( pHIT000094771 )
(Hypothetical protein.)
genome : 10,043,517 - 10,082,420 (38,904)
query : 1 - 270 (270/270)
3 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027713)
CAGE tag :
H39BA47I1805
HIX0027713
HIT000524425 (
ENST00000426491
)
(Hypothetical short protein.)
genome : 10,055,085 - 10,200,154 (145,070)
query : 1 - 804 (804/804)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 8.5, cyto_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027713)
HIX0027713
HIT000549085 (
ENST00000451151
)
(Hypothetical short protein.)
genome : 10,084,789 - 10,199,963 (115,175)
query : 1 - 453 (453/453)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027713)
HIX0027713
HIT000551478 (
ENST00000453544
)
(Hypothetical short protein.)
genome : 10,084,993 - 10,349,424 (264,432)
query : 1 - 368 (368/368)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
This sequence is too short.
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027713)
HIX0174850
HIT000522865 (
ENST00000424931
)
(Hypothetical short protein.)
genome : 10,154,168 - 10,177,638 (23,471)
query : 1 - 349 (349/349)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto_nucl 8, cyto 6, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174850)
HIX0175043
HIT000555938 (
ENST00000458004
)
(Non-protein coding transcript.)
genome : 10,160,883 - 10,166,423 (5,541)
query : 1 - 446 (446/446)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175043)
HIX0196711
pHIT000035242 ( pHIT000035242 )
Representative transcript
(Hypothetical protein.)
genome : 10,199,249 - 10,201,987 (2,739)
query : 1 - 387 (387/387)
3 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0196711)
CAGE tag :
H04BA02K1210
HIX0015639
HIT000199945 (
NM_003081
)
(Synaptosomal-associated protein 25 isoform SNAP25A.)
genome : 10,199,477 - 10,288,066 (88,590)
query : 1 - 2,054 (2,054/2,069)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13, extr 4, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015639)
HIX0015639
HIT000212091 (
NM_130811
)
(Synaptosomal-associated protein 25; SNAP-25; Super protein; SUP; Synaptosomal-associated 25 kDa protein;)
genome : 10,199,477 - 10,288,066 (88,590)
query : 1 - 2,054 (2,054/2,069)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13, extr 4, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015639)
HIX0015639
HIT000106720 (
ENST00000254976
)
(Synaptosomal-associated protein 25; SNAP-25; Super protein; SUP; Synaptosomal-associated 25 kDa protein;)
genome : 10,199,478 - 10,288,066 (88,589)
query : 1 - 2,053 (2,053/2,053)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13, extr 4, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015639)
HIX0015639
HIT000019415
(
AK094560
)
(Synaptosomal-associated protein 25; SNAP-25; Super protein; SUP; Synaptosomal-associated 25 kDa protein;)
genome : 10,199,478 - 10,288,065 (88,588)
query : 1 - 2,170 (2,170/2,170)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.999)3'
coverage = 1.000
InterPro :
IPR000727 : Target SNARE coiled-coil domain
IPR000928 : SNAP-25
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 12.8333, cyto_plas 11.8333, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015639)
HIX0015639
HIT000023177
(
AK098347
)
(Synaptosomal-associated protein 25; SNAP-25; Super protein; SUP; Synaptosomal-associated 25 kDa protein;)
genome : 10,199,478 - 10,288,065 (88,588)
query : 1 - 1,812 (1,812/1,812)
7 exons
identity = 0.987
5'(0.993;0.806;0.978;1.000;1.000;0.906;0.998)3'
coverage = 1.000
InterPro :
IPR000727 : Target SNARE coiled-coil domain
IPR000928 : SNAP-25
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 7.5, cyto_nucl 7.5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015639)
HIX0015639
HIT000116882 (
ENST00000304886
)
(Synaptosomal-associated protein 25 isoform SNAP25A.)
genome : 10,199,481 - 10,288,066 (88,586)
query : 1 - 2,050 (2,050/2,050)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13, extr 4, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015639)
HIX0015639
HIT000101100
(
D21267
)
(Synaptosomal-associated protein 25; SNAP-25; Super protein; SUP; Synaptosomal-associated 25 kDa protein;)
genome : 10,199,497 - 10,288,065 (88,569)
query : 14 - 2,046 (2,033/2,046)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.998)3'
coverage = 1.000
InterPro :
IPR000727 : Target SNARE coiled-coil domain
IPR000928 : SNAP-25
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13, extr 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015639)
HIX0015639
HIT000331397
(
AK223617
)
(Synaptosomal-associated protein 25; SNAP-25; Super protein; SUP; Synaptosomal-associated 25 kDa protein;)
genome : 10,199,493 - 10,287,172 (87,680)
query : 10 - 1,153 (1,144/1,153)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;0.980;1.000;1.000;1.000;
1.000)3'
coverage = 0.992
InterPro :
IPR000727 : Target SNARE coiled-coil domain
IPR000928 : SNAP-25
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 12.5, extr 5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015639)
HIX0015639
HIT000433225
(
AK314359
)
(Synaptosomal-associated protein 25; SNAP-25; Super protein; SUP; Synaptosomal-associated 25 kDa protein;)
genome : 10,199,535 - 10,286,845 (87,311)
query : 1 - 775 (775/775)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR000727 : Target SNARE coiled-coil domain
IPR000928 : SNAP-25
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13, extr 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015639)
HIX0015639
HIT000422444
(
AK289647
)
Representative transcript
(Synaptosomal-associated protein 25 isoform SNAP25A.)
genome : 10,199,540 - 10,287,258 (87,719)
query : 1 - 1,438 (1,438/1,438)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR000727 : Target SNARE coiled-coil domain
IPR000928 : SNAP-25
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13, extr 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015639)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB169798
Pan
sp. (Chimpanzee) : AB188276
Rattus
sp. (Rat) : AF245227
Mus
sp. (Mouse) : AK078038
Danio
sp. (Zebrafish) : BC063942
Bos
sp. (Cow) : BC118237
Tetraodon
sp. (Tetraodon) : CR697598
Pongo
sp. (Orangutan) : CR926071
Monodelphis
sp. (Opossum) : ENSMODT00000006033
Oryzias
sp. (Medaka) : ENSORLT00000020178
Gallus
sp. (Chicken) : M57957
Takifugu
sp. (Fugu) : SINFRUT00000183229
Equus
sp. (Horse) : XM_001493127
Canis
sp. (Dog) : XM_854145
HIX0015639
HIT000035030
(
BC010647
)
(Synaptosomal-associated protein 25 isoform SNAP25A.)
genome : 10,199,557 - 10,288,066 (88,510)
query : 1 - 1,974 (1,974/1,989)
8 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.998)3'
coverage = 1.000
InterPro :
IPR000727 : Target SNARE coiled-coil domain
IPR000928 : SNAP-25
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13, extr 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015639)
HIX0015639
HIT000056090
(
BX647443
)
(Synaptosomal-associated protein 25; SNAP-25; Super protein; SUP; Synaptosomal-associated 25 kDa protein;)
genome : 10,199,574 - 10,288,065 (88,492)
query : 1 - 1,956 (1,956/1,975)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.999)3'
coverage = 0.999
InterPro :
IPR000727 : Target SNARE coiled-coil domain
IPR000928 : SNAP-25
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13, extr 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015639)
HIX0015639
HIT000023597
(
AK098767
)
(Synaptosomal-associated protein 25 isoform SNAP25A.)
genome : 10,199,576 - 10,288,065 (88,490)
query : 1 - 1,954 (1,954/1,954)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.999)3'
coverage = 1.000
InterPro :
IPR000727 : Target SNARE coiled-coil domain
IPR000928 : SNAP-25
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13, extr 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015639)
HIX0015639
HIT000528270 (
ENST00000430336
)
(Synaptosomal-associated protein 25; SNAP-25; Super protein; SUP; Synaptosomal-associated 25 kDa protein;)
genome : 10,199,714 - 10,273,926 (74,213)
query : 1 - 492 (492/492)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 4.5, mito 4, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015639)
HIX0097028
HIT000388103
(
BC119791
)
Representative transcript
(Hypothetical short protein.)
genome : 10,200,060 - 10,200,402 (343)
query : 9 - 351 (343/360)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 0.953
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 9, cyto 6, mito_nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0097028)
HIX0027713
HIT000338650
(
BC107086
)
(Hypothetical short protein.)
genome : 10,200,060 - 10,200,402 (343)
query : 10 - 352 (343/356)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 0.963
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 10, nucl 3, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027713)
HIX0015639
HIT000192368
(
L19760
)
(Synaptosomal-associated protein 25 isoform SNAP25A.)
genome : 10,256,072 - 10,287,059 (30,988)
query : 21 - 923 (903/923)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.992;1.000;1.000)3'
coverage = 0.978
InterPro :
IPR000727 : Target SNARE coiled-coil domain
IPR000928 : SNAP-25
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13, extr 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015639)
HIX0015639
HIT000192369
(
L19761
)
(Synaptosomal-associated protein 25; SNAP-25; Super protein; SUP; Synaptosomal-associated 25 kDa protein;)
genome : 10,256,072 - 10,287,059 (30,988)
query : 21 - 923 (903/923)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.978
InterPro :
IPR000727 : Target SNARE coiled-coil domain
IPR000928 : SNAP-25
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13, extr 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015639)
HIX0015639
HIT000266608
(
BT019684
)
(Synaptosomal-associated protein 25 isoform SNAP25A.)
genome : 10,256,140 - 10,286,844 (30,705)
query : 1 - 620 (620/621)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.998
InterPro :
IPR000727 : Target SNARE coiled-coil domain
IPR000928 : SNAP-25
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13, extr 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015639)
HIX0015639
HIT000596280 (
ENST00000492814
)
(Synaptosomal-associated protein 25; SNAP-25; Super protein; SUP; Synaptosomal-associated 25 kDa protein;)
genome : 10,256,167 - 10,258,717 (2,551)
query : 1 - 430 (430/430)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 14, extr 9, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015639)
HIX0027679
HIT000098632
(
BC047512
)
Representative transcript
(Hypothetical short protein.)
genome : 10,268,655 - 10,271,296 (2,642)
query : 1 - 2,643 (2,643/2,659)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14, extr 7, cyto_nucl 7, cyto_golg 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027679)
HIX0027679
HIT000044152
(
AK124279
)
(Hypothetical short protein.)
genome : 10,269,583 - 10,271,295 (1,713)
query : 1 - 1,713 (1,713/1,713)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14, extr 7, cyto_nucl 7, cyto_golg 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027679)
HIX0015639
HIT000016189
(
AK091322
)
(Synaptosomal-associated protein 25 isoform SNAP25A.)
genome : 10,272,777 - 10,275,437 (2,661)
query : 1 - 2,662 (2,662/2,662)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, mito 4, cyto 3.5, cyto_nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015639)
HIX0015639
HIT000015724
(
AK090857
)
(Synaptosomal-associated protein 25; SNAP-25; Super protein; SUP; Synaptosomal-associated 25 kDa protein;)
genome : 10,276,084 - 10,288,065 (11,982)
query : 1 - 3,053 (3,053/3,053)
3 exons
identity = 0.997
5'(0.996;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR000727 : Target SNARE coiled-coil domain
IPR000928 : SNAP-25
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, cyto 2.5, cyto_nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015639)
HIX0015639
HIT000010006
(
AK026732
)
(Synaptosomal-associated protein 25; SNAP-25; Super protein; SUP; Synaptosomal-associated 25 kDa protein;)
genome : 10,276,878 - 10,288,066 (11,189)
query : 1 - 2,256 (2,256/2,279)
3 exons
identity = 0.998
5'(0.998;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR000727 : Target SNARE coiled-coil domain
IPR000928 : SNAP-25
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, cyto 2.5, cyto_nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015639)
HIX0015639
HIT000599231 (
ENST00000495883
)
(Synaptosomal-associated protein 25; SNAP-25; Super protein; SUP; Synaptosomal-associated 25 kDa protein;)
genome : 10,276,878 - 10,288,066 (11,189)
query : 1 - 2,256 (2,256/2,256)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, cyto 2.5, cyto_nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015639)
HIX0015640
HIT000019327
(
AK094472
)
Representative transcript
(Conserved hypothetical protein.)
genome : 10,290,278 - 10,292,323 (2,046)
query : 1 - 2,046 (2,046/2,046)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 24, plas 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015640)
HIX0174800
HIT000514132 (
ENST00000416198
)
(Hypoxia induced protein, domain containing protein.)
genome : 10,315,067 - 10,315,346 (280)
query : 1 - 280 (280/280)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, mito 3, cyto_nucl 3, nucl 2.5, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174800)
HIX0138364
HIT000544571 (
ENST00000446637
)
(Ribosomal protein L25/L23 family protein.)
genome : 10,329,805 - 10,330,276 (472)
query : 1 - 472 (472/472)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto 8, extr 4, cyto_pero 4, cyto_plas 4,
cyto_golg 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0138364)
HIX0138348
HIT000474228 (
ENST00000390233
)
(Non-protein coding transcript.)
genome : 10,342,736 - 10,342,878 (143)
query : 1 - 143 (143/143)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0138348)
HIX0196346
HIT000539242 (
ENST00000441308
)
(Sda1 family protein.)
genome : 10,366,427 - 10,368,454 (2,028)
query : 1 - 2,028 (2,028/2,028)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 15.5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0196346)
HIX0015641
HIT000677408 (
ENST00000564280
)
(Hypothetical short protein.)
genome : 10,381,657 - 10,384,178 (2,522)
query : 1 - 2,522 (2,522/2,522)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 12, cyto_nucl 10.5, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015641)
HIX0015641
HIT000011386
(
AK054772
)
Representative transcript
(Conserved hypothetical protein.)
genome : 10,382,257 - 10,384,178 (1,922)
query : 1 - 1,922 (1,922/1,922)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 12, cyto_nucl 10.5, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015641)
HIX0015642
HIT000214586 (
NM_170784
)
(McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin; Bardet-Biedl syndrome 6 protein;)
genome : 10,385,428 - 10,414,887 (29,460)
query : 1 - 2,960 (2,960/2,960)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31.5, extr_plas 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015642)
HIX0015642
HIT000727367 (
NR_072977
)
(Conserved hypothetical protein.)
genome : 10,385,428 - 10,414,887 (29,460)
query : 1 - 1,558 (1,558/1,558)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31.5, extr_plas 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015642)
HIX0015642
HIT000491063
(
AK296439
)
(Conserved hypothetical protein.)
genome : 10,385,428 - 10,414,881 (29,454)
query : 1 - 1,552 (1,552/1,552)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31.5, extr_plas 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015642)
HIX0015642
HIT000207430 (
NM_018848
)
(McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin; Bardet-Biedl syndrome 6 protein;)
genome : 10,385,428 - 10,412,573 (27,146)
query : 1 - 3,070 (3,070/3,070)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31.5, extr_plas 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015642)
HIX0015642
HIT000050964
(
BC028973
)
(McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin; Bardet-Biedl syndrome 6 protein;)
genome : 10,385,838 - 10,414,790 (28,953)
query : 1 - 2,453 (2,453/2,497)
6 exons
identity = 0.998
3'(0.996;1.000;1.000;0.999;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002423 : Chaperonin Cpn60/TCP-1 family
IPR027409 : GroEL-like apical domain
IPR027413 : GroEL-like equatorial domain
IPR028790 : McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin
GO :
0005524 : Molecular Function : ATP binding
0006457 : Biological Process : protein folding
0042384 : Biological Process : cilium assembly
0044267 : Biological Process : cellular protein metabolic process
0051082 : Molecular Function : unfolded protein binding
0060271 : Biological Process : cilium morphogenesis
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 14.5, nucl 10, extr 2, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015642)
HIX0015642
HIT000026061
(
AL157427
)
(McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin; Bardet-Biedl syndrome 6 protein;)
genome : 10,385,838 - 10,414,827 (28,990)
query : 1 - 2,490 (2,490/2,512)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31.5, extr_plas 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015642)
HIX0015642
HIT000074380
(
AF221993
)
(McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin; Bardet-Biedl syndrome 6 protein;)
genome : 10,385,838 - 10,412,570 (26,733)
query : 1 - 2,657 (2,657/2,678)
6 exons
identity = 1.000
3'(1.000;1.000;0.994;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31.5, extr_plas 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015642)
HIX0015642
HIT000009015
(
AK025741
)
(McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin; Bardet-Biedl syndrome 6 protein;)
genome : 10,385,838 - 10,414,807 (28,970)
query : 15 - 2,485 (2,471/2,503)
6 exons
identity = 0.994
3'(0.992;1.000;1.000;0.998;1.000;0.868)5'
coverage = 0.994
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31.5, extr_plas 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015642)
HIX0015642
HIT000074379
(
AF221992
)
Representative transcript
(McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin; Bardet-Biedl syndrome 6 protein;)
genome : 10,385,838 - 10,414,842 (29,005)
query : 1 - 2,505 (2,505/2,516)
6 exons
identity = 1.000
3'(1.000;1.000;0.994;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31.5, extr_plas 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015642)
HIX0015642
HIT000307443 (
ENST00000347364
)
(McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin; Bardet-Biedl syndrome 6 protein;)
genome : 10,385,832 - 10,414,870 (29,039)
query : 1 - 2,539 (2,539/2,539)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31.5, extr_plas 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015642)
HIX0015642
HIT000482168 (
ENST00000399054
)
(McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin; Bardet-Biedl syndrome 6 protein;)
genome : 10,385,832 - 10,412,570 (26,739)
query : 1 - 2,663 (2,663/2,663)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31.5, extr_plas 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015642)
HIX0015642
HIT000424722
(
AK291925
)
(McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin; Bardet-Biedl syndrome 6 protein;)
genome : 10,385,837 - 10,414,836 (29,000)
query : 1 - 2,500 (2,500/2,500)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31.5, extr_plas 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015642)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK004987
Rattus
sp. (Rat) : BC083863
Pongo
sp. (Orangutan) : CR858036
Equus
sp. (Horse) : ENSECAT00000020756
Oryzias
sp. (Medaka) : ENSORLT00000015281
Tetraodon
sp. (Tetraodon) : GSTENT00030852001
Takifugu
sp. (Fugu) : SINFRUT00000173385
Macaca
sp. (Macaque) : XM_001116196
Pan
sp. (Chimpanzee) : XM_001169410
Monodelphis
sp. (Opossum) : XM_001374382
Canis
sp. (Dog) : XM_542894
Bos
sp. (Cow) : XM_865734
HIX0015642
HIT000066046
(
AF075024
)
(McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin; Bardet-Biedl syndrome 6 protein;)
genome : 10,394,076 - 10,401,298 (7,223)
query : 2 - 628 (627/628)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 13, extr 5, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015642)
HIX0015642
HIT000075945
(
AF275813
)
(Hypothetical protein.)
genome : 10,394,177 - 10,401,408 (7,232)
query : 21 - 655 (635/679)
2 exons
identity = 0.994
3'(0.990;1.000)5'
coverage = 0.969
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31.5, extr_plas 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015642)
HIX0015642
HIT000088084
(
BC013287
)
(Hypothetical short protein.)
genome : 10,394,358 - 10,394,558 (201)
query : 4 - 204 (201/235)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.976
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, mito 3.5, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015642)
HIX0015642
HIT000087216
(
BC009180
)
(Non-protein coding transcript.)
genome : 10,394,357 - 10,394,488 (132)
query : 9 - 140 (132/157)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015642)
HIX0027687
HIT000050900
(
BC026094
)
(Protein SLX4IP.)
genome : 10,415,951 - 10,603,995 (188,045)
query : 5 - 1,379 (1,375/1,406)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 12, extr 6, cyto 3, extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027687)
HIX0027687
HIT000129016 (
ENST00000334534
)
(Protein SLX4IP; SLX4-interacting protein;)
genome : 10,415,951 - 10,604,027 (188,077)
query : 1 - 1,407 (1,407/1,407)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 12, extr 5, cyto 4, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027687)
HIX0027687
HIT000365141 (
NM_001009608
)
(Protein SLX4IP; SLX4-interacting protein;)
genome : 10,415,951 - 10,604,027 (188,077)
query : 1 - 1,407 (1,407/1,407)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 12, extr 5, cyto 4, pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027687)
HIX0027687
HIT000090244
(
BC020787
)
Representative transcript
(Protein SLX4IP.)
genome : 10,415,951 - 10,603,995 (188,045)
query : 1 - 1,375 (1,375/1,404)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 12.5, extr 6, cyto 3, extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027687)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK050487
Gallus
sp. (Chicken) : CR406961
Pongo
sp. (Orangutan) : ENSPPYT00000012443
Rattus
sp. (Rat) : XM_001081289
Macaca
sp. (Macaque) : XM_001116207
Pan
sp. (Chimpanzee) : XM_001169452
Equus
sp. (Horse) : XM_001495300
Bos
sp. (Cow) : XR_028683
HIX0027687
HIT000592443 (
ENST00000488816
)
(Protein SLX4IP.)
genome : 10,579,323 - 10,617,477 (38,155)
query : 1 - 597 (597/597)
4 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12.5, cyto_mito 11, cyto_nucl 8, cyto 7.5,
extr 7, cyto_pero 5.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027687)
HIX0196343
HIT000553998 (
ENST00000456064
)
(DnaJ domain containing protein.)
genome : 10,593,509 - 10,594,877 (1,369)
query : 1 - 1,369 (1,369/1,369)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 14.5, nucl 9, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0196343)
HIX0196343
HIT000108118_03 (
ENST00000261752
)
(DnaJ domain containing protein.)
genome : 10,594,084 - 10,594,842 (759)
query : 1 - 759 (759/759)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 14.5, nucl 9, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0196343)
HIX0226992
HIT000535438 (
ENST00000437504
)
(Conserved hypothetical protein.)
genome : 9,966,774 - 10,023,864 (57,091)
query : 1 - 489 (489/489)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226992)
HIX0015635
pHIT000035234 ( pHIT000035234 )
(Hypothetical short protein.)
genome : 9,049,886 - 9,078,846 (28,961)
query : 1 - 171 (171/171)
3 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015635)
CAGE tag :
H08BA27D2105,H27BC92C1307,H27BD54L1502
H28BA26L1513,H37BA19O1309
HIX0027713
pHIT000094771 ( pHIT000094771 )
(Hypothetical protein.)
genome : 10,043,517 - 10,082,420 (38,904)
query : 1 - 270 (270/270)
3 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027713)
CAGE tag :
H08BA54J0603,H09BA59K0302,H10BA82D1209
H22BB89H1010,H39BA47I1805
HIX0196711
pHIT000035242 ( pHIT000035242 )
Representative transcript
(Hypothetical protein.)
genome : 10,199,249 - 10,201,987 (2,739)
query : 1 - 387 (387/387)
3 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0196711)
CAGE tag :
H04BA01C2205,H04BA01L1201,H04BA02B0109
H04BA02J0101,H04BA02K1210
AL121898.23
9000001-9160649 F +
NCBI
AL121909.10
9160650-9249800 F +
NCBI
AL023805.2
9249801-9387479 F +
NCBI
AL031652.4
9387480-9536020 F +
NCBI
AL353612.9
9536021-9589784 F +
NCBI
AL135935.17
9589785-9644333 F +
NCBI
AL031682.4
9644334-9800536 F +
NCBI
AL034427.4
9800537-9857067 F +
NCBI
AL353739.4
9857068-9958355 F +
NCBI
AL109754.13
9958356-10123265 F +
NCBI
AL354824.8
10123266-10207116 F +
NCBI
AL023913.6
10207117-10347322 F +
NCBI
AL034430.4
10347323-10422039 F +
NCBI
AL353599.7
10422040-10450839 F +
NCBI
AL133340.27
10450840-10589181 F +
NCBI
AL035456.26
10589182-10600000 F +
NCBI