bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0175038
HIT000555158 (
ENST00000457224
)
(Hypothetical short protein.)
genome : 24,123,226 - 24,125,022 (1,797)
query : 1 - 534 (534/534)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 11, cyto 3, cyto_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175038)
HIX0018172
HIT000015767
(
AK090900
)
Representative transcript
(Conserved hypothetical protein.)
genome : 24,180,403 - 24,205,224 (24,822)
query : 1 - 2,376 (2,376/2,376)
4 exons
identity = 0.997
5'(1.000;0.997;0.950;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 13, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018172)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : XM_001103555
HIX0018172
HIT000555208 (
ENST00000457274
)
(Hypothetical protein.)
genome : 24,180,403 - 24,205,224 (24,822)
query : 1 - 2,376 (2,376/2,376)
4 exons
identity = 0.997
5'(1.000;0.999;0.950;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 13, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018172)
HIX0018172
HIT000726162 (
NR_040102
)
(Hypothetical protein.)
genome : 24,180,403 - 24,205,224 (24,822)
query : 1 - 2,376 (2,376/2,376)
4 exons
identity = 0.997
5'(1.000;0.999;0.950;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 13, mito 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018172)
HIX0175018
HIT000551855 (
ENST00000453921
)
(Hypothetical short protein.)
genome : 24,278,221 - 24,298,722 (20,502)
query : 1 - 602 (602/602)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 9, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175018)
HIX0175046
HIT000556331 (
ENST00000458397
)
(Conserved hypothetical protein.)
genome : 24,426,027 - 24,426,950 (924)
query : 1 - 924 (924/924)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175046)
HIX0196754
pHIT000120966 ( pHIT000120966 )
Representative transcript
(Hypothetical short protein.)
genome : 24,439,318 - 24,450,792 (11,475)
query : 1 - 219 (219/219)
3 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0196754)
CAGE tag :
T20R0174496D
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : XM_001252435
HIX0015696
HIT000358142 (
ENST00000376862
)
(Synapse differentiation-inducing gene protein 1; SynDIG1; Dispanin subfamily C member 2; DSPC2; Transmembrane protein 90B;)
genome : 24,449,835 - 24,647,252 (197,418)
query : 1 - 2,522 (2,522/2,522)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015696)
HIX0015696
HIT000007556
(
AK024282
)
Representative transcript
(Synapse differentiation-inducing gene protein 1; SynDIG1; Dispanin subfamily C member 2; DSPC2; Transmembrane protein 90B;)
genome : 24,449,835 - 24,647,167 (197,333)
query : 1 - 2,437 (2,437/2,437)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR007593 : CD225/Dispanin family
GO :
0009607 : Biological Process : response to biotic stimulus
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015696)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB171074
Rattus
sp. (Rat) : BC092131
Gallus
sp. (Chicken) : BX950498
Equus
sp. (Horse) : ENSECAT00000006450
Oryzias
sp. (Medaka) : ENSORLT00000003804
Pongo
sp. (Orangutan) : ENSPPYT00000012517
Pan
sp. (Chimpanzee) : ENSPTRT00000024765
Tetraodon
sp. (Tetraodon) : GSTENT00025018001
Mus
sp. (Mouse) : NM_001085521
Takifugu
sp. (Fugu) : SINFRUT00000158177
Danio
sp. (Zebrafish) : XM_001332064
Monodelphis
sp. (Opossum) : XM_001373882
Canis
sp. (Dog) : XM_844786
HIX0015696
HIT000209574 (
NM_024893
)
(Synapse differentiation-inducing gene protein 1; SynDIG1; Dispanin subfamily C member 2; DSPC2; Transmembrane protein 90B;)
genome : 24,449,835 - 24,647,167 (197,333)
query : 1 - 2,437 (2,437/2,437)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015696)
HIX0015696
HIT000041079
(
BC030637
)
(Synapse differentiation-inducing gene protein 1; SynDIG1; Dispanin subfamily C member 2; DSPC2; Transmembrane protein 90B;)
genome : 24,450,336 - 24,647,173 (196,838)
query : 4 - 1,945 (1,942/1,959)
4 exons
identity = 0.999
5'(1.000;0.998;1.000;0.999)3'
coverage = 0.998
InterPro :
IPR007593 : CD225/Dispanin family
GO :
0009607 : Biological Process : response to biotic stimulus
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015696)
HIX0175049
HIT000556395 (
ENST00000458461
)
(Hypothetical short protein.)
genome : 24,472,108 - 24,482,981 (10,874)
query : 1 - 823 (823/823)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 8, cyto_nucl 6.33333, cyto 2.5,
cyto_pero 2.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0175049)
HIX0015696
HIT000268175
(
CR457325
)
(Synapse differentiation-inducing gene protein 1; SynDIG1; Dispanin subfamily C member 2; DSPC2; Transmembrane protein 90B;)
genome : 24,523,734 - 24,646,136 (122,403)
query : 1 - 773 (773/777)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.995
InterPro :
IPR007593 : CD225/Dispanin family
GO :
0009607 : Biological Process : response to biotic stimulus
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015696)
HIX0015696
HIT000586562 (
ENST00000482637
)
(Synapse differentiation-inducing gene protein 1; SynDIG1; Dispanin subfamily C member 2; DSPC2; Transmembrane protein 90B;)
genome : 24,565,538 - 24,577,789 (12,252)
query : 1 - 417 (417/417)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 21, nucl 6, cyto_nucl 6, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015696)
HIX0203103
HIT000530768 (
ENST00000432834
)
(Hypothetical short protein.)
genome : 24,660,183 - 24,661,627 (1,445)
query : 1 - 805 (805/805)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203103)
HIX0015697
HIT000200460 (
NM_003650
)
(Cystatin family protein.)
genome : 24,929,866 - 24,940,563 (10,698)
query : 1 - 929 (929/940)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, mito 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015697)
HIX0015697
HIT000584793 (
ENST00000480798
)
(Cystatin family protein.)
genome : 24,929,866 - 24,940,564 (10,699)
query : 1 - 930 (930/930)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015697)
HIX0015697
HIT000358115 (
ENST00000376835
)
(Cystatin family protein.)
genome : 24,929,866 - 24,940,562 (10,697)
query : 1 - 928 (928/928)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015697)
HIX0015697
HIT000063076
(
AF031824
)
Representative transcript
(Cystatin family protein.)
genome : 24,929,927 - 24,940,562 (10,636)
query : 1 - 867 (867/867)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000010 : Proteinase inhibitor I25, cystatin
IPR027214 : Cystatin
GO :
0004869 : Molecular Function : cysteine-type endopeptidase inhibitor activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, mito 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015697)
HIX0015697
HIT000037150
(
BC015507
)
(Cystatin family protein.)
genome : 24,929,971 - 24,940,563 (10,593)
query : 1 - 824 (824/905)
4 exons
identity = 0.998
5'(1.000;1.000;0.991;0.997)3'
coverage = 1.000
InterPro :
IPR000010 : Proteinase inhibitor I25, cystatin
IPR027214 : Cystatin
GO :
0004869 : Molecular Function : cysteine-type endopeptidase inhibitor activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, mito 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015697)
HIX0015697
HIT000058395
(
AB015225
)
(Cystatin family protein.)
genome : 24,929,994 - 24,940,562 (10,569)
query : 1 - 800 (800/800)
4 exons
identity = 0.998
5'(1.000;1.000;0.991;0.997)3'
coverage = 1.000
InterPro :
IPR000010 : Proteinase inhibitor I25, cystatin
IPR027214 : Cystatin
GO :
0004869 : Molecular Function : cysteine-type endopeptidase inhibitor activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, mito 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015697)
HIX0015697
HIT000266387
(
BT009825
)
(Cystatin family protein.)
genome : 24,930,076 - 24,940,346 (10,271)
query : 1 - 502 (502/504)
4 exons
identity = 0.998
5'(1.000;1.000;0.991;1.000)3'
coverage = 0.996
InterPro :
IPR000010 : Proteinase inhibitor I25, cystatin
IPR027214 : Cystatin
GO :
0004869 : Molecular Function : cysteine-type endopeptidase inhibitor activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, mito 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015697)
HIX0015697
HIT000063333
(
AF036342
)
(Cystatin family protein.)
genome : 24,930,085 - 24,940,557 (10,473)
query : 1 - 704 (704/727)
4 exons
identity = 0.996
5'(1.000;1.000;0.991;0.993)3'
coverage = 1.000
InterPro :
IPR000010 : Proteinase inhibitor I25, cystatin
IPR027214 : Cystatin
GO :
0004869 : Molecular Function : cysteine-type endopeptidase inhibitor activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015697)
HIX0015697
HIT000268730
(
CR541860
)
(Cystatin family protein.)
genome : 24,930,142 - 24,940,348 (10,207)
query : 1 - 438 (438/438)
4 exons
identity = 0.998
5'(1.000;1.000;0.991;1.000)3'
coverage = 1.000
InterPro :
IPR000010 : Proteinase inhibitor I25, cystatin
IPR027214 : Cystatin
GO :
0004869 : Molecular Function : cysteine-type endopeptidase inhibitor activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015697)
HIX0015697
HIT000268748
(
CR541878
)
(Cystatin family protein.)
genome : 24,930,142 - 24,940,345 (10,204)
query : 1 - 435 (435/435)
4 exons
identity = 0.998
5'(1.000;1.000;0.991;1.000)3'
coverage = 1.000
InterPro :
IPR000010 : Proteinase inhibitor I25, cystatin
IPR027214 : Cystatin
GO :
0004869 : Molecular Function : cysteine-type endopeptidase inhibitor activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015697)
HIX0015698
HIT000207977 (
NM_020531
)
(Adipocyte plasma membrane-associated protein; Protein BSCv;)
genome : 24,943,580 - 24,973,425 (29,846)
query : 1 - 2,221 (2,221/2,251)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 24, nucl 3, cyto 2, mito_nucl 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015698)
HIX0015698
HIT000010140
(
AK026866
)
(Adipocyte plasma membrane-associated protein.)
genome : 24,943,580 - 24,952,212 (8,633)
query : 21 - 1,719 (1,699/1,749)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.988
InterPro :
IPR011042 : Six-bladed beta-propeller, TolB-like
IPR018119 : Strictosidine synthase, conserved region
GO :
0009058 : Biological Process : biosynthetic process
0016844 : Molecular Function : strictosidine synthase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 18, cyto 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015698)
HIX0015698
HIT000059095
(
AB033767
)
Representative transcript
(Adipocyte plasma membrane-associated protein; Protein BSCv;)
genome : 24,943,580 - 24,973,360 (29,781)
query : 5 - 2,160 (2,156/2,188)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.998
InterPro :
IPR011042 : Six-bladed beta-propeller, TolB-like
IPR018119 : Strictosidine synthase, conserved region
GO :
0009058 : Biological Process : biosynthetic process
0016844 : Molecular Function : strictosidine synthase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 24, nucl 3, cyto 2, mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015698)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ720833
Mus
sp. (Mouse) : AK154266
Rattus
sp. (Rat) : AY325201
Danio
sp. (Zebrafish) : BC044505
Bos
sp. (Cow) : BC102429
Oryzias
sp. (Medaka) : ENSORLT00000003789
Pongo
sp. (Orangutan) : ENSPPYT00000012519
Tetraodon
sp. (Tetraodon) : GSTENT00025016001
Takifugu
sp. (Fugu) : SINFRUT00000158173
Macaca
sp. (Macaque) : XM_001098383
Monodelphis
sp. (Opossum) : XM_001382052
Equus
sp. (Horse) : XM_001491000
Pan
sp. (Chimpanzee) : XM_514556
Canis
sp. (Dog) : XM_844993
HIX0015698
HIT000068267
(
AF090935
)
(Adipocyte plasma membrane-associated protein.)
genome : 24,943,580 - 24,973,278 (29,699)
query : 1 - 2,098 (2,098/2,122)
10 exons
identity = 0.998
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.939)5'
coverage = 0.989
InterPro :
IPR011042 : Six-bladed beta-propeller, TolB-like
IPR018119 : Strictosidine synthase, conserved region
GO :
0009058 : Biological Process : biosynthetic process
0016844 : Molecular Function : strictosidine synthase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 11, mito 8.5, extr_plas 8.5, extr 6, cyto_mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015698)
HIX0015698
HIT000031559
(
BC003501
)
(Adipocyte plasma membrane-associated protein; Protein BSCv;)
genome : 24,943,580 - 24,973,349 (29,770)
query : 1 - 2,145 (2,145/2,166)
9 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR011042 : Six-bladed beta-propeller, TolB-like
IPR018119 : Strictosidine synthase, conserved region
GO :
0009058 : Biological Process : biosynthetic process
0016844 : Molecular Function : strictosidine synthase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 24, nucl 3, cyto 2, mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015698)
HIX0015698
HIT000103229 (
ENST00000217456
)
(Adipocyte plasma membrane-associated protein; Protein BSCv;)
genome : 24,943,561 - 24,973,615 (30,055)
query : 1 - 2,430 (2,430/2,430)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 24, nucl 3, cyto 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015698)
HIX0015698
HIT000549376 (
ENST00000451442
)
(Adipocyte plasma membrane-associated protein.)
genome : 24,943,561 - 24,973,278 (29,718)
query : 1 - 2,117 (2,117/2,117)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, mito 6, cyto 4, mito_pero 4, nucl 3, lyso 3,
cyto_pero 3, cyto_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015698)
HIX0015698
HIT000009108
(
AK025834
)
(Adipocyte plasma membrane-associated protein.)
genome : 24,943,580 - 24,952,198 (8,619)
query : 1 - 1,685 (1,685/1,701)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR011042 : Six-bladed beta-propeller, TolB-like
IPR018119 : Strictosidine synthase, conserved region
GO :
0009058 : Biological Process : biosynthetic process
0016844 : Molecular Function : strictosidine synthase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 15.5, cyto 9.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015698)
HIX0015698
HIT000253120
(
AY359076
)
(Adipocyte plasma membrane-associated protein.)
genome : 24,943,581 - 24,964,638 (21,058)
query : 1 - 2,007 (2,007/2,019)
8 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.999
InterPro :
IPR011042 : Six-bladed beta-propeller, TolB-like
IPR018119 : Strictosidine synthase, conserved region
GO :
0009058 : Biological Process : biosynthetic process
0016844 : Molecular Function : strictosidine synthase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, E.R. 4, pero 4, lyso 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015698)
HIX0015698
HIT000545072 (
ENST00000447138
)
(Adipocyte plasma membrane-associated protein.)
genome : 24,943,581 - 24,973,360 (29,780)
query : 1 - 1,962 (1,962/1,962)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 20, nucl 4, cyto 3.5, cyto_mito 2.5, extr 1,
E.R. 1, lyso 1, golg 1, E.R._golg 1
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015698)
HIX0015698
HIT000423926
(
AK291129
)
(Adipocyte plasma membrane-associated protein.)
genome : 24,944,193 - 24,973,386 (29,194)
query : 1 - 1,569 (1,569/1,569)
9 exons
identity = 0.997
3'(0.998;0.995;1.000;1.000;1.000;1.000;0.991;
1.000;0.994)5'
coverage = 1.000
InterPro :
IPR011042 : Six-bladed beta-propeller, TolB-like
IPR018119 : Strictosidine synthase, conserved region
GO :
0009058 : Biological Process : biosynthetic process
0016844 : Molecular Function : strictosidine synthase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 24, nucl 3, cyto 2, mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015698)
HIX0015698
HIT000496583
(
AK301959
)
(Adipocyte plasma membrane-associated protein.)
genome : 24,944,205 - 24,973,566 (29,362)
query : 1 - 1,544 (1,544/1,544)
8 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.997)5'
coverage = 1.000
InterPro :
IPR011042 : Six-bladed beta-propeller, TolB-like
IPR018119 : Strictosidine synthase, conserved region
GO :
0009058 : Biological Process : biosynthetic process
0016844 : Molecular Function : strictosidine synthase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 20, nucl 4, cyto 3.5, cyto_mito 2.5, extr 1,
E.R. 1, lyso 1, golg 1, E.R._golg 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015698)
HIX0226835
HIT000092561
(
BC032076
)
Representative transcript
(Acetyl-coenzyme A synthetase 2-like, mitochondrial isoform 4 precursor.)
genome : 24,986,873 - 24,995,875 (9,003)
query : 6 - 2,363 (2,358/2,394)
7 exons
identity = 0.998
3'(0.999;1.000;1.000;1.000;0.992;1.000;0.980)5'
coverage = 0.998
EC number :
EC 6.2.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00620 : Pyruvate metabolism (62)
00640 : Propanoate metabolism (45)
00680 : Methane metabolism (75)
00720 : Carbon fixation pathways in prokaryotes (41)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR000873 : AMP-dependent synthetase/ligase
IPR025110 : AMP-binding enzyme C-terminal domain
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 15, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226835)
HIX0226835
HIT000027953
(
AL833041
)
(Acetyl-coenzyme A synthetase 2-like, mitochondrial; EC=6.2.1.1; Acetate--CoA ligase 2; Acetyl-CoA synthetase 2; AceCS2; Acyl-CoA synthetase short-chain family member 1; Precursor;)
genome : 24,986,873 - 24,990,128 (3,256)
query : 1 - 1,928 (1,928/1,940)
2 exons
identity = 0.998
3'(0.998;1.000)5'
coverage = 1.000
EC number :
EC 6.2.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00620 : Pyruvate metabolism (62)
00640 : Propanoate metabolism (45)
00680 : Methane metabolism (75)
00720 : Carbon fixation pathways in prokaryotes (41)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR025110 : AMP-binding enzyme C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 10, extr 9, mito 6, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226835)
HIX0226835
HIT000588249 (
ENST00000484396
)
(AMP-binding enzyme C-terminal domain containing protein.)
genome : 24,986,868 - 24,992,962 (6,095)
query : 1 - 4,767 (4,767/4,767)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 12, nucl 7, extr 5, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226835)
HIX0226835
HIT000015718
(
AK090851
)
(Acetyl-coenzyme A synthetase 2-like, mitochondrial; EC=6.2.1.1; Acetate--CoA ligase 2; Acetyl-CoA synthetase 2; AceCS2; Acyl-CoA synthetase short-chain family member 1; Precursor;)
genome : 24,986,868 - 24,990,635 (3,768)
query : 1 - 2,440 (2,440/2,440)
2 exons
identity = 0.999
3'(0.999;0.999)5'
coverage = 1.000
EC number :
EC 6.2.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00620 : Pyruvate metabolism (62)
00640 : Propanoate metabolism (45)
00680 : Methane metabolism (75)
00720 : Carbon fixation pathways in prokaryotes (41)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR025110 : AMP-binding enzyme C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 12, nucl 7, extr 5, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226835)
HIX0226835
HIT000045796
(
AK125923
)
(Acetyl-coenzyme A synthetase 2-like, mitochondrial; EC=6.2.1.1; Acetate--CoA ligase 2; Acetyl-CoA synthetase 2; AceCS2; Acyl-CoA synthetase short-chain family member 1; Precursor;)
genome : 24,986,870 - 24,992,962 (6,093)
query : 1 - 4,765 (4,765/4,765)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.2.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00620 : Pyruvate metabolism (62)
00640 : Propanoate metabolism (45)
00680 : Methane metabolism (75)
00720 : Carbon fixation pathways in prokaryotes (41)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR025110 : AMP-binding enzyme C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 12, nucl 7, extr 5, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226835)
HIX0226829
HIT000007670
(
AK024396
)
Representative transcript
(AMP-dependent synthetase/ligase domain containing protein.)
genome : 24,997,638 - 25,003,006 (5,369)
query : 1 - 5,123 (5,123/5,125)
2 exons
identity = 0.997
3'(1.000;0.997)5'
coverage = 1.000
InterPro :
IPR000873 : AMP-dependent synthetase/ligase
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226829)
HIX0226829
HIT000007698
(
AK024424
)
(AMP-dependent synthetase/ligase domain containing protein.)
genome : 24,997,638 - 25,002,532 (4,895)
query : 1 - 4,896 (4,896/4,896)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
InterPro :
IPR000873 : AMP-dependent synthetase/ligase
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226829)
HIX0040682
HIT000089863
(
BC019031
)
Representative transcript
(Conserved hypothetical protein.)
genome : 25,021,540 - 25,023,358 (1,819)
query : 1 - 1,814 (1,814/1,851)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 6.33333, mito 6, cyto 5.5, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040682)
HIX0226838
HIT000019269
(
AK094414
)
Representative transcript
(Conserved hypothetical protein.)
genome : 25,026,574 - 25,039,616 (13,043)
query : 2 - 2,245 (2,244/2,245)
3 exons
identity = 0.996
3'(0.994;1.000;0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25.5, cyto_mito 14.1667, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226838)
HIX0226838
HIT000358006 (
ENST00000376726
)
(Conserved hypothetical protein.)
genome : 25,026,574 - 25,039,616 (13,043)
query : 1 - 2,244 (2,244/2,244)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25.5, cyto_mito 14.1667, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226838)
HIX0040512
HIT000723566 (
NM_001256271
)
(Visual system homeobox 1; Homeodomain protein RINX; Retinal inner nuclear layer homeobox protein; Transcription factor VSX1;)
genome : 25,051,525 - 25,063,015 (11,491)
query : 1 - 2,040 (2,040/2,055)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040512)
HIX0040512
HIT000723567 (
NM_001256272
)
(Visual system homeobox 1; Homeodomain protein RINX; Retinal inner nuclear layer homeobox protein; Transcription factor VSX1;)
genome : 25,051,525 - 25,063,015 (11,491)
query : 1 - 2,221 (2,221/2,236)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040512)
HIX0040512
HIT000726445 (
NR_045948
)
(Visual system homeobox 1; Homeodomain protein RINX; Retinal inner nuclear layer homeobox protein; Transcription factor VSX1;)
genome : 25,051,525 - 25,063,015 (11,491)
query : 1 - 2,329 (2,329/2,344)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040512)
HIX0040512
HIT000726446 (
NR_045951
)
(Visual system homeobox 1 isoform c.)
genome : 25,051,525 - 25,063,015 (11,491)
query : 1 - 2,148 (2,148/2,163)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040512)
HIX0040512
HIT000527696 (
ENST00000429762
)
(Visual system homeobox 1; Homeodomain protein RINX; Retinal inner nuclear layer homeobox protein; Transcription factor VSX1;)
genome : 25,051,521 - 25,062,767 (11,247)
query : 1 - 1,977 (1,977/1,977)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040512)
HIX0040512
HIT000393893
(
DQ854812
)
Representative transcript
(Visual system homeobox 1; Homeodomain protein RINX; Retinal inner nuclear layer homeobox protein; Transcription factor VSX1;)
genome : 25,052,131 - 25,062,767 (10,637)
query : 1 - 1,367 (1,367/1,379)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR017970 : Homeobox, conserved site
IPR023339 : CVC domain
GO :
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040512)
HIX0040512
HIT000393891
(
DQ854810
)
(Visual system homeobox 1 isoform c.)
genome : 25,052,131 - 25,062,767 (10,637)
query : 1 - 1,294 (1,294/1,305)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040512)
HIX0040512
HIT000507980 (
ENST00000409958
)
(Visual system homeobox 1 isoform c.)
genome : 25,052,131 - 25,062,767 (10,637)
query : 1 - 1,294 (1,294/1,305)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040512)
HIX0040512
HIT000393890
(
DQ854809
)
(Visual system homeobox 1; Homeodomain protein RINX; Retinal inner nuclear layer homeobox protein; Transcription factor VSX1;)
genome : 25,052,131 - 25,062,767 (10,637)
query : 1 - 1,475 (1,475/1,485)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR017970 : Homeobox, conserved site
IPR023339 : CVC domain
GO :
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040512)
HIX0040512
HIT000507318 (
ENST00000409285
)
(Visual system homeobox 1; Homeodomain protein RINX; Retinal inner nuclear layer homeobox protein; Transcription factor VSX1;)
genome : 25,052,131 - 25,062,767 (10,637)
query : 1 - 1,475 (1,475/1,485)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040512)
HIX0040512
HIT000393892
(
DQ854811
)
(Visual system homeobox 1; Homeodomain protein RINX; Retinal inner nuclear layer homeobox protein; Transcription factor VSX1;)
genome : 25,052,131 - 25,062,767 (10,637)
query : 1 - 1,186 (1,186/1,195)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040512)
HIX0040512
HIT000542445 (
ENST00000444511
)
(Visual system homeobox 1; Homeodomain protein RINX; Retinal inner nuclear layer homeobox protein; Transcription factor VSX1;)
genome : 25,052,131 - 25,062,767 (10,637)
query : 1 - 1,186 (1,186/1,195)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040512)
HIX0040512
HIT000522508 (
ENST00000424574
)
(Visual system homeobox 1; Homeodomain protein RINX; Retinal inner nuclear layer homeobox protein; Transcription factor VSX1;)
genome : 25,053,245 - 25,062,996 (9,752)
query : 1 - 1,107 (1,107/1,107)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040512)
HIX0040512
HIT000549192 (
ENST00000451258
)
(Visual system homeobox 1; Homeodomain protein RINX; Retinal inner nuclear layer homeobox protein; Transcription factor VSX1;)
genome : 25,053,250 - 25,062,996 (9,747)
query : 1 - 921 (921/921)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040512)
HIX0040512
HIT000204920 (
NM_014588
)
(Visual system homeobox 1; Homeodomain protein RINX; Retinal inner nuclear layer homeobox protein; Transcription factor VSX1;)
genome : 25,056,072 - 25,063,015 (6,944)
query : 1 - 2,206 (2,206/2,216)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040512)
HIX0040512
HIT000393888
(
DQ854807
)
(Visual system homeobox 1; Homeodomain protein RINX; Retinal inner nuclear layer homeobox protein; Transcription factor VSX1;)
genome : 25,056,072 - 25,062,767 (6,696)
query : 1 - 1,958 (1,958/1,968)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR017970 : Homeobox, conserved site
IPR023339 : CVC domain
GO :
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040512)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : AF251032
Mus
sp. (Mouse) : BC057647
Danio
sp. (Zebrafish) : BC059574
Equus
sp. (Horse) : ENSECAT00000003277
Gallus
sp. (Chicken) : ENSGALT00000013957
Monodelphis
sp. (Opossum) : ENSMODT00000008040
Pongo
sp. (Orangutan) : ENSPPYT00000012521
Rattus
sp. (Rat) : ENSRNOT00000009627
Tetraodon
sp. (Tetraodon) : GSTENT00025013001
Takifugu
sp. (Fugu) : SINFRUT00000158162
Pan
sp. (Chimpanzee) : XM_001156350
Canis
sp. (Dog) : XM_845045
Macaca
sp. (Macaque) : XR_013317
HIX0040512
HIT000075032
(
AF251033
)
(Visual system homeobox 1; Homeodomain protein RINX; Retinal inner nuclear layer homeobox protein; Transcription factor VSX1;)
genome : 25,056,102 - 25,062,767 (6,666)
query : 1 - 1,928 (1,928/1,956)
5 exons
identity = 0.998
3'(0.996;1.000;1.000;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR017970 : Homeobox, conserved site
IPR023339 : CVC domain
GO :
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040512)
HIX0040512
HIT000357989 (
ENST00000376709
)
(Visual system homeobox 1; Homeodomain protein RINX; Retinal inner nuclear layer homeobox protein; Transcription factor VSX1;)
genome : 25,056,102 - 25,062,996 (6,895)
query : 1 - 2,157 (2,157/2,157)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040512)
HIX0040512
HIT000072673
(
AF176797
)
(Visual system homeobox 1; Homeodomain protein RINX; Retinal inner nuclear layer homeobox protein; Transcription factor VSX1;)
genome : 25,056,835 - 25,062,996 (6,162)
query : 10 - 1,433 (1,424/1,433)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.994
InterPro :
IPR017970 : Homeobox, conserved site
IPR023339 : CVC domain
GO :
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040512)
HIX0040512
HIT000388820
(
BC126228
)
(Visual system homeobox 1; Homeodomain protein RINX; Retinal inner nuclear layer homeobox protein; Transcription factor VSX1;)
genome : 25,056,876 - 25,062,757 (5,882)
query : 1 - 1,144 (1,144/1,144)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR017970 : Homeobox, conserved site
IPR023339 : CVC domain
GO :
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040512)
HIX0040512
HIT000500513
(
BC136497
)
(Visual system homeobox 1; Homeodomain protein RINX; Retinal inner nuclear layer homeobox protein; Transcription factor VSX1;)
genome : 25,056,876 - 25,062,757 (5,882)
query : 1 - 1,144 (1,144/1,144)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR017970 : Homeobox, conserved site
IPR023339 : CVC domain
GO :
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040512)
HIX0040512
HIT000670584 (
ENST00000557285
)
(Visual system homeobox 1; Homeodomain protein RINX; Retinal inner nuclear layer homeobox protein; Transcription factor VSX1;)
genome : 25,056,944 - 25,058,635 (1,692)
query : 1 - 558 (558/558)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 13.5, cyto 9.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040512)
HIX0040512
HIT000075033
(
AF251034
)
(Visual system homeobox 1; Homeodomain protein RINX; Retinal inner nuclear layer homeobox protein; Transcription factor VSX1;)
genome : 25,059,197 - 25,062,767 (3,571)
query : 1 - 930 (930/949)
3 exons
identity = 0.998
3'(0.995;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040512)
HIX0040512
HIT000319750 (
NM_199425
)
(Visual system homeobox 1; Homeodomain protein RINX; Retinal inner nuclear layer homeobox protein; Transcription factor VSX1;)
genome : 25,059,179 - 25,063,015 (3,837)
query : 1 - 1,196 (1,196/1,196)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040512)
HIX0040512
HIT000357987 (
ENST00000376707
)
(Visual system homeobox 1; Homeodomain protein RINX; Retinal inner nuclear layer homeobox protein; Transcription factor VSX1;)
genome : 25,059,179 - 25,062,767 (3,589)
query : 1 - 948 (948/948)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040512)
HIX0040512
HIT000393889
(
DQ854808
)
(Visual system homeobox 1; Homeodomain protein RINX; Retinal inner nuclear layer homeobox protein; Transcription factor VSX1;)
genome : 25,059,197 - 25,062,767 (3,571)
query : 1 - 930 (930/943)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040512)
HIX0040512
HIT000481531 (
ENST00000398332
)
(Visual system homeobox 1; Homeodomain protein RINX; Retinal inner nuclear layer homeobox protein; Transcription factor VSX1;)
genome : 25,062,309 - 25,062,996 (688)
query : 1 - 688 (688/696)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.989
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 12, extr 10, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040512)
HIX0196285
pHIT000120975 ( pHIT000120975 )
Representative transcript
(Conserved hypothetical protein.)
genome : 25,065,763 - 25,080,259 (14,497)
query : 1 - 510 (510/510)
3 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0196285)
CAGE tag :
T20F017DAFEF
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : XR_012278
Pan
sp. (Chimpanzee) : XR_024021
HIX0196285
HIT000592142_02 (
ENST00000488493
)
(Hypothetical protein.)
genome : 25,079,254 - 25,080,090 (837)
query : 42 - 561 (520/561)
2 exons
identity = 0.950
5'(0.946;0.951)3'
coverage = 0.927
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, E.R. 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0196285)
HIX0196285
HIT000106979 (
ENST00000256654
)
(Conserved hypothetical protein.)
genome : 25,079,741 - 25,080,564 (824)
query : 1 - 824 (824/824)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0196285)
HIX0196285
HIT000528805 (
ENST00000430871
)
(Conserved hypothetical protein.)
genome : 25,079,741 - 25,080,427 (687)
query : 1 - 663 (663/663)
1 exon
identity = 0.965
5'(0.965)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, E.R. 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0196285)
HIX0196757
pHIT000120976 ( pHIT000120976 )
Representative transcript
(Conserved hypothetical protein.)
genome : 25,110,664 - 25,126,320 (15,657)
query : 1 - 849 (849/849)
5 exons
InterPro :
IPR006954 : Moulting cycle MLT-10-like protein
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0196757)
CAGE tag :
T20F017DAFEF
Ortholog candidate ( ->
Evola
)
Takifugu
sp. (Fugu) : SINFRUT00000140968
Macaca
sp. (Macaque) : XM_001106654
HIX0015701
HIT000086996
(
BC008055
)
(Hypothetical short protein.)
genome : 25,121,425 - 25,123,094 (1,670)
query : 1 - 1,670 (1,670/1,688)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23.5, mito_pero 13, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015701)
HIX0015701
HIT000552610 (
ENST00000454676
)
(Hypothetical protein.)
genome : 25,121,425 - 25,129,426 (8,002)
query : 1 - 3,168 (3,168/3,168)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, nucl 15
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015701)
HIX0015701
HIT000020655
(
AK095800
)
Representative transcript
(Conserved hypothetical protein.)
genome : 25,121,434 - 25,129,426 (7,993)
query : 1 - 3,159 (3,159/3,159)
4 exons
identity = 0.999
3'(1.000;0.993;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, nucl 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015701)
HIX0015701
HIT000563253 (
NR_027091
)
(Conserved hypothetical protein.)
genome : 25,121,434 - 25,129,426 (7,993)
query : 1 - 3,159 (3,159/3,159)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, nucl 15
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015701)
HIX0015701
HIT000563254 (
NR_027092
)
(Conserved hypothetical protein.)
genome : 25,121,434 - 25,129,361 (7,928)
query : 1 - 2,452 (2,452/2,452)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_mito 9.16667, mito 9, cyto_nucl 8.66667,
cyto 8.5, extr 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015701)
HIX0015701
HIT000563255 (
NR_027093
)
(Conserved hypothetical protein.)
genome : 25,121,434 - 25,128,629 (7,196)
query : 1 - 2,559 (2,559/2,559)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_mito 9.16667, mito 9, cyto_nucl 8.66667,
cyto 8.5, extr 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015701)
HIX0015701
HIT000386465
(
BC105718
)
(Hypothetical protein.)
genome : 25,122,106 - 25,128,629 (6,524)
query : 1 - 1,887 (1,887/1,887)
4 exons
identity = 0.999
3'(1.000;0.986;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_mito 9.16667, mito 9, cyto_nucl 8.66667,
cyto 8.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015701)
HIX0015701
HIT000386469
(
BC105722
)
(Hypothetical protein.)
genome : 25,122,106 - 25,128,629 (6,524)
query : 1 - 1,887 (1,887/1,887)
4 exons
identity = 0.999
3'(0.999;0.993;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_mito 9.16667, mito 9, cyto_nucl 8.66667,
cyto 8.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015701)
HIX0015701
HIT000428253
(
AK309387
)
(Hypothetical short protein.)
genome : 25,122,495 - 25,129,430 (6,936)
query : 1 - 1,182 (1,182/1,182)
4 exons
identity = 0.997
3'(0.997;0.998;0.992;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, nucl 10.5, cyto_nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015701)
HIX0015701
HIT000428237
(
AK309371
)
(Hypothetical protein.)
genome : 25,122,762 - 25,129,361 (6,600)
query : 1 - 1,124 (1,124/1,124)
4 exons
identity = 0.999
3'(1.000;0.993;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_mito 9.16667, mito 9, cyto_nucl 8.66667,
cyto 8.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015701)
HIX0015701
HIT000536221 (
ENST00000438287
)
(Hypothetical short protein.)
genome : 25,123,876 - 25,129,894 (6,019)
query : 1 - 468 (468/468)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015701)
HIX0015701
HIT000538291 (
ENST00000440357
)
(Non-protein coding transcript.)
genome : 25,124,001 - 25,129,876 (5,876)
query : 1 - 343 (343/343)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015701)
HIX0015701
HIT000524788 (
ENST00000426854
)
(Non-protein coding transcript.)
genome : 25,124,001 - 25,125,060 (1,060)
query : 16 - 292 (277/292)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.949
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015701)
HIX0174949
HIT000538576 (
ENST00000440642
)
(Magnesium transporter NIPA family protein.)
genome : 25,141,803 - 25,142,697 (895)
query : 1 - 895 (895/895)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174949)
HIX0020334
HIT000017525
(
AK092658
)
Representative transcript
(Transposase, L1 family protein.)
genome : 25,165,308 - 25,177,508 (12,201)
query : 4 - 2,163 (2,160/2,163)
6 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR004244 : Transposase, L1
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto 8, nucl 6, E.R._mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020334)
HIX0226878
HIT000427492
(
AK308626
)
(Ectonucleoside triphosphate diphosphohydrolase 6 isoform 2.)
genome : 25,176,339 - 25,202,359 (26,021)
query : 1 - 1,546 (1,546/1,546)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;0.993;0.987;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
InterPro :
IPR000407 : Nucleoside phosphatase GDA1/CD39
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 21, plas 4, E.R. 2, golg 2, E.R._golg 2,
cysk_plas 2, cyto_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226878)
HIX0226878
HIT000537096 (
ENST00000439162
)
(Nucleoside phosphatase GDA1/CD39 family protein.)
genome : 25,176,362 - 25,199,250 (22,889)
query : 1 - 1,028 (1,028/1,028)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 23, extr 3, E.R. 2, golg 2, extr_plas 2,
E.R._golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226878)
HIX0226878
HIT000515401 (
ENST00000417467
)
(Nucleoside phosphatase GDA1/CD39 family protein.)
genome : 25,176,372 - 25,198,217 (21,846)
query : 1 - 809 (809/809)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 25, plas 3, extr 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226878)
HIX0226878
HIT000525487 (
ENST00000427553
)
(Nucleoside phosphatase GDA1/CD39 family protein.)
genome : 25,176,411 - 25,198,217 (21,807)
query : 1 - 451 (451/451)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, nucl 9, extr 7, E.R._mito 7, mito_pero 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226878)
HIX0226878
HIT000533454 (
ENST00000435520
)
(Nucleoside phosphatase GDA1/CD39 family protein.)
genome : 25,176,428 - 25,194,012 (17,585)
query : 1 - 878 (878/878)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 11, mito 10, cyto 4.5, E.R. 4, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226878)
HIX0226878
HIT000516824 (
ENST00000418890
)
(Nucleoside phosphatase GDA1/CD39 family protein.)
genome : 25,176,429 - 25,197,353 (20,925)
query : 1 - 656 (656/656)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 24, plas 3, extr 3, extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226878)
HIX0226878
HIT000497019
(
AK302395
)
Representative transcript
(Ectonucleoside triphosphate diphosphohydrolase 6 isoform 1.)
genome : 25,176,458 - 25,202,239 (25,782)
query : 1 - 1,376 (1,376/1,376)
11 exons
identity = 0.999
5'(1.000;1.000;0.997;1.000;1.000;0.987;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
InterPro :
IPR000407 : Nucleoside phosphatase GDA1/CD39
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 12, mito 5, E.R. 5, E.R._mito 5, cyto 4.5,
cyto_nucl 3.5, E.R._golg 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226878)
HIX0226878
HIT000523747 (
ENST00000425813
)
(Nucleoside phosphatase GDA1/CD39 family protein.)
genome : 25,176,475 - 25,201,969 (25,495)
query : 1 - 945 (945/945)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 11, mito 8, E.R. 5, cyto 3.5, E.R._golg 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226878)
HIX0226944
HIT000585298 (
ENST00000481322
)
(Non-protein coding transcript.)
genome : 25,202,695 - 25,203,519 (825)
query : 1 - 414 (414/414)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226944)
HIX0226941
HIT000568516 (
ENST00000463734
)
(Nucleoside phosphatase GDA1/CD39 family protein.)
genome : 25,204,503 - 25,206,369 (1,867)
query : 1 - 639 (639/639)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 11.5, extr 10, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226941)
HIX0226918
HIT000254797
(
AY459290
)
Representative transcript
(Hypothetical protein.)
genome : 25,206,548 - 25,206,733 (186)
query : 1 - 186 (186/186)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 5.5, cyto_nucl 5.33333, cyto 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226918)
HIX0040503
HIT000064796
(
AF058296
)
Representative transcript
(Conserved hypothetical protein.)
genome : 25,207,084 - 25,207,371 (288)
query : 1 - 287 (287/287)
1 exon
identity = 0.993
3'(0.993)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, nucl 9, cyto_nucl 8.83333, extr 6,
E.R._mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040503)
HIX0040503
HIT000705167 (
ENST00000593352
)
(Conserved hypothetical protein.)
genome : 25,207,122 - 25,207,370 (249)
query : 1 - 249 (249/249)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, nucl 9, cyto_nucl 8.83333, extr 6,
E.R._mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040503)
HIX0027716
HIT000045306
(
AK125433
)
Representative transcript
(Conserved hypothetical protein.)
genome : 25,209,786 - 25,212,569 (2,784)
query : 1 - 2,784 (2,784/2,784)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 4.5, cyto_nucl 4, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027716)
HIX0027702
HIT000043700
(
AK123827
)
Representative transcript
(Conserved hypothetical protein.)
genome : 25,219,643 - 25,225,865 (6,223)
query : 1 - 2,337 (2,337/2,337)
2 exons
identity = 0.998
3'(0.998;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 13, extr 7, cyto 7, nucl 4, cyto_golg 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027702)
HIX0018253
HIT000023204
(
AK098374
)
Representative transcript
(Conserved hypothetical protein.)
genome : 25,219,753 - 25,221,308 (1,556)
query : 1 - 1,556 (1,556/1,556)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018253)
HIX0015703
HIT000103141 (
ENST00000216962
)
(Glycogen phosphorylase, brain form; EC=2.4.1.1;)
genome : 25,228,705 - 25,278,650 (49,946)
query : 1 - 4,134 (4,134/4,134)
20 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 13, extr 5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015703)
HIX0015703
HIT000199737 (
NM_002862
)
(Glycogen phosphorylase, brain form; EC=2.4.1.1;)
genome : 25,228,706 - 25,278,648 (49,943)
query : 1 - 4,131 (4,131/4,131)
20 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 13, extr 5, nucl 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015703)
HIX0015703
HIT000427902
(
AK309036
)
(Glycogen phosphorylase, brain form; EC=2.4.1.1;)
genome : 25,228,708 - 25,266,913 (38,206)
query : 1 - 2,358 (2,358/2,358)
15 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.986;0.989;0.993;1.000;0.991;1.000;0.993;
0.994)3'
coverage = 1.000
EC number :
EC 2.4.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
InterPro :
IPR000811 : Glycosyl transferase, family 35
IPR011833 : Glycogen/starch/alpha-glucan phosphorylase
GO :
0004645 : Molecular Function : phosphorylase activity
0005975 : Biological Process : carbohydrate metabolic process
0008184 : Molecular Function : glycogen phosphorylase activity
0030170 : Molecular Function : pyridoxal phosphate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, extr 4, E.R. 4, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015703)
HIX0015703
HIT000494321
(
AK299697
)
(Glycogen phosphorylase, brain form; EC=2.4.1.1;)
genome : 25,228,721 - 25,277,531 (48,811)
query : 1 - 2,938 (2,938/2,938)
20 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.993;1.000;1.000;1.000;0.993;
1.000;1.000;0.995;0.993;0.985;0.998)3'
coverage = 1.000
EC number :
EC 2.4.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
InterPro :
IPR000811 : Glycosyl transferase, family 35
IPR011833 : Glycogen/starch/alpha-glucan phosphorylase
GO :
0004645 : Molecular Function : phosphorylase activity
0005975 : Biological Process : carbohydrate metabolic process
0008184 : Molecular Function : glycogen phosphorylase activity
0030170 : Molecular Function : pyridoxal phosphate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, mito 4, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015703)
HIX0015703
HIT000041139
(
BC030795
)
(Glycogen phosphorylase, brain form; EC=2.4.1.1;)
genome : 25,228,741 - 25,278,629 (49,889)
query : 12 - 4,088 (4,077/4,103)
20 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.997
EC number :
EC 2.4.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
InterPro :
IPR000811 : Glycosyl transferase, family 35
IPR011833 : Glycogen/starch/alpha-glucan phosphorylase
GO :
0004645 : Molecular Function : phosphorylase activity
0005975 : Biological Process : carbohydrate metabolic process
0008184 : Molecular Function : glycogen phosphorylase activity
0030170 : Molecular Function : pyridoxal phosphate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 13, extr 5, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015703)
HIX0015703
HIT000037804
(
BC017045
)
Representative transcript
(Glycogen phosphorylase, brain form; EC=2.4.1.1;)
genome : 25,228,731 - 25,278,645 (49,915)
query : 1 - 4,103 (4,103/4,154)
20 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
InterPro :
IPR000811 : Glycosyl transferase, family 35
IPR011833 : Glycogen/starch/alpha-glucan phosphorylase
GO :
0004645 : Molecular Function : phosphorylase activity
0005975 : Biological Process : carbohydrate metabolic process
0008184 : Molecular Function : glycogen phosphorylase activity
0030170 : Molecular Function : pyridoxal phosphate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 13, extr 5, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015703)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB220423
Gallus
sp. (Chicken) : AJ719440
Mus
sp. (Mouse) : AK169052
Bos
sp. (Cow) : BC107536
Danio
sp. (Zebrafish) : BC134889
Pongo
sp. (Orangutan) : CR860831
Oryzias
sp. (Medaka) : ENSORLT00000011231
Tetraodon
sp. (Tetraodon) : GSTENT00035781001
Rattus
sp. (Rat) : L10668
Takifugu
sp. (Fugu) : SINFRUT00000158156
Monodelphis
sp. (Opossum) : XM_001382050
Equus
sp. (Horse) : XM_001490567
Pan
sp. (Chimpanzee) : XM_525293
Canis
sp. (Dog) : XM_534201
HIX0015703
HIT000191169
(
J03544
)
(Glycogen phosphorylase, brain form; EC=2.4.1.1;)
genome : 25,228,736 - 25,278,644 (49,909)
query : 1 - 3,814 (3,814/3,816)
21 exons
identity = 0.991
5'(0.994;0.990;1.000;1.000;1.000;0.982;1.000;
0.993;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.978)3'
coverage = 0.999
EC number :
EC 2.4.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
InterPro :
IPR000811 : Glycosyl transferase, family 35
IPR011833 : Glycogen/starch/alpha-glucan phosphorylase
GO :
0004645 : Molecular Function : phosphorylase activity
0005975 : Biological Process : carbohydrate metabolic process
0008184 : Molecular Function : glycogen phosphorylase activity
0030170 : Molecular Function : pyridoxal phosphate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 13, extr 5, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015703)
HIX0015703
HIT000329015
(
AB209080
)
(Glycogen phosphorylase, brain form; EC=2.4.1.1;)
genome : 25,228,748 - 25,278,647 (49,900)
query : 1 - 4,093 (4,093/4,093)
20 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.993;1.000;0.993;1.000;0.991;1.000;0.993;
1.000;1.000;1.000;1.000;0.985;0.995)3'
coverage = 1.000
EC number :
EC 2.4.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
InterPro :
IPR000811 : Glycosyl transferase, family 35
IPR011833 : Glycogen/starch/alpha-glucan phosphorylase
GO :
0004645 : Molecular Function : phosphorylase activity
0005975 : Biological Process : carbohydrate metabolic process
0008184 : Molecular Function : glycogen phosphorylase activity
0030170 : Molecular Function : pyridoxal phosphate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 21, cyto 3, cyto_pero 3, plas 2, E.R. 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015703)
HIX0015703
HIT000220017
(
U47025
)
(Glycosyl transferase, family 35 protein.)
genome : 25,228,781 - 25,278,648 (49,868)
query : 1 - 4,056 (4,056/4,066)
20 exons
identity = 0.998
5'(0.993;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.996)3'
coverage = 1.000
EC number :
EC 2.4.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
InterPro :
IPR000811 : Glycosyl transferase, family 35
IPR011833 : Glycogen/starch/alpha-glucan phosphorylase
GO :
0004645 : Molecular Function : phosphorylase activity
0005975 : Biological Process : carbohydrate metabolic process
0008184 : Molecular Function : glycogen phosphorylase activity
0030170 : Molecular Function : pyridoxal phosphate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 15.5, cyto 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015703)
HIX0015703
HIT000526392 (
ENST00000428458
)
(Glycogen phosphorylase, brain form; EC=2.4.1.1;)
genome : 25,270,484 - 25,277,104 (6,621)
query : 1 - 734 (734/734)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16.1667, cyto_plas 11, nucl 5.5,
extr 3, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015703)
HIX0015703
HIT000079608
(
AF432222
)
(Glycogen phosphorylase, brain form; EC=2.4.1.1;)
genome : 25,271,213 - 25,278,649 (7,437)
query : 1 - 2,100 (2,100/2,100)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 2.4.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
InterPro :
IPR000811 : Glycosyl transferase, family 35
GO :
0005975 : Biological Process : carbohydrate metabolic process
0008184 : Molecular Function : glycogen phosphorylase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 15.5, cyto_plas 14.3333, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015703)
HIX0015703
HIT000575794 (
ENST00000471359
)
(Glycogen phosphorylase, brain form; EC=2.4.1.1;)
genome : 25,274,537 - 25,277,272 (2,736)
query : 1 - 726 (726/726)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.4.1.1
KEGG pathway :
00500 : Starch and sucrose metabolism (71)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 11.5, extr 8, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015703)
HIX0015704
HIT000205561 (
NM_015600
)
(Monoacylglycerol lipase ABHD12 isoform b.)
genome : 25,275,379 - 25,371,618 (96,240)
query : 1 - 1,724 (1,724/1,751)
13 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;0.952;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.23
KEGG pathway :
00561 : Glycerolipid metabolism (35)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 23, cyto 3, mito 3, mito_pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015704)
HIX0015704
HIT000036488
(
BC014049
)
Representative transcript
(Monoacylglycerol lipase ABHD12 isoform b.)
genome : 25,275,379 - 25,371,454 (96,076)
query : 1 - 1,569 (1,569/1,596)
13 exons
identity = 0.991
3'(1.000;1.000;1.000;1.000;0.940;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.971)5'
coverage = 1.000
EC number :
EC 3.1.1.23
KEGG pathway :
00561 : Glycerolipid metabolism (35)
01100 : Metabolic pathways (1346)
InterPro :
IPR026605 : Monoacylglycerol lipase protein ABHD12
IPR029058 : Alpha/Beta hydrolase fold
IPR029059 : Alpha/beta hydrolase fold-5
GO :
0047372 : Molecular Function : acylglycerol lipase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 23, cyto 3, mito 3, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015704)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB168958
Gallus
sp. (Chicken) : AJ720754
Mus
sp. (Mouse) : AK160126
Rattus
sp. (Rat) : BC078918
Bos
sp. (Cow) : BC123534
Danio
sp. (Zebrafish) : BC124330
Oryzias
sp. (Medaka) : ENSORLT00000003469
Pongo
sp. (Orangutan) : ENSPPYT00000012526
Pan
sp. (Chimpanzee) : ENSPTRT00000024778
Takifugu
sp. (Fugu) : SINFRUT00000139715
Monodelphis
sp. (Opossum) : XM_001382049
Equus
sp. (Horse) : XM_001490613
Canis
sp. (Dog) : XM_534202
HIX0015704
HIT000357822 (
ENST00000376542
)
(Monoacylglycerol lipase ABHD12 isoform b.)
genome : 25,275,379 - 25,371,619 (96,241)
query : 1 - 1,725 (1,725/1,725)
13 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;0.952;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.23
KEGG pathway :
00561 : Glycerolipid metabolism (35)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 23, cyto 3, mito 3, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015704)
HIX0015704
HIT000570381 (
ENST00000465694
)
(Monoacylglycerol lipase ABHD12 isoform b.)
genome : 25,275,379 - 25,281,520 (6,142)
query : 1 - 474 (474/474)
2 exons
identity = 0.979
3'(1.000;0.949)5'
coverage = 1.000
EC number :
EC 3.1.1.23
KEGG pathway :
00561 : Glycerolipid metabolism (35)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 10.5, extr 9, cyto_nucl 9, mito 8, cyto 4.5,
extr_plas 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015704)
HIX0015703
HIT000327161
(
Z36853
)
(Non-protein coding transcript.)
genome : 25,277,959 - 25,278,247 (289)
query : 2 - 290 (289/290)
1 exon
identity = 0.956
5'(0.956)3'
coverage = 0.997
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015703)
HIX0015704
HIT000397535 (
NM_001042472
)
(Monoacylglycerol lipase ABHD12; EC=3.1.1.23; 2-arachidonoylglycerol hydrolase; Abhydrolase domain-containing protein 12;)
genome : 25,280,834 - 25,371,618 (90,785)
query : 1 - 2,123 (2,123/2,140)
13 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;0.952;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.23
KEGG pathway :
00561 : Glycerolipid metabolism (35)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 18, cyto 6, mito 5, mito_pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015704)
HIX0015704
HIT000024604
(
AL117442
)
(Monoacylglycerol lipase ABHD12; EC=3.1.1.23; 2-arachidonoylglycerol hydrolase; Abhydrolase domain-containing protein 12;)
genome : 25,280,850 - 25,300,923 (20,074)
query : 1 - 1,375 (1,375/1,392)
10 exons
identity = 0.994
3'(0.996;0.992;1.000;1.000;0.952;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.999
EC number :
EC 3.1.1.23
KEGG pathway :
00561 : Glycerolipid metabolism (35)
01100 : Metabolic pathways (1346)
InterPro :
IPR026605 : Monoacylglycerol lipase protein ABHD12
IPR029058 : Alpha/Beta hydrolase fold
IPR029059 : Alpha/beta hydrolase fold-5
GO :
0047372 : Molecular Function : acylglycerol lipase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 18, cyto 6, nucl 4, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015704)
HIX0015704
HIT000131787 (
ENST00000339157
)
(Monoacylglycerol lipase ABHD12; EC=3.1.1.23; 2-arachidonoylglycerol hydrolase; Abhydrolase domain-containing protein 12;)
genome : 25,280,834 - 25,371,612 (90,779)
query : 1 - 2,117 (2,117/2,117)
13 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;0.952;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.23
KEGG pathway :
00561 : Glycerolipid metabolism (35)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 18, cyto 6, mito 5, mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015704)
HIX0015704
HIT000082058
(
AK075023
)
(Monoacylglycerol lipase ABHD12; EC=3.1.1.23; 2-arachidonoylglycerol hydrolase; Abhydrolase domain-containing protein 12;)
genome : 25,280,850 - 25,371,349 (90,500)
query : 1 - 1,838 (1,838/1,838)
13 exons
identity = 0.995
3'(0.996;0.984;1.000;1.000;0.952;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.23
KEGG pathway :
00561 : Glycerolipid metabolism (35)
01100 : Metabolic pathways (1346)
InterPro :
IPR026605 : Monoacylglycerol lipase protein ABHD12
IPR029058 : Alpha/Beta hydrolase fold
IPR029059 : Alpha/beta hydrolase fold-5
GO :
0047372 : Molecular Function : acylglycerol lipase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 17, cyto 7, mito 5, mito_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015704)
HIX0015704
HIT000488119
(
AK293495
)
(Monoacylglycerol lipase ABHD12; EC=3.1.1.23; 2-arachidonoylglycerol hydrolase; Abhydrolase domain-containing protein 12;)
genome : 25,281,161 - 25,371,212 (90,052)
query : 25 - 1,374 (1,350/1,374)
14 exons
identity = 0.987
3'(0.989;0.993;0.984;1.000;1.000;0.952;1.000;
0.992;1.000;1.000;1.000;1.000;1.000;0.891)5'
coverage = 0.983
EC number :
EC 3.1.1.23
KEGG pathway :
00561 : Glycerolipid metabolism (35)
01100 : Metabolic pathways (1346)
InterPro :
IPR026605 : Monoacylglycerol lipase protein ABHD12
IPR029058 : Alpha/Beta hydrolase fold
IPR029059 : Alpha/beta hydrolase fold-5
GO :
0047372 : Molecular Function : acylglycerol lipase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 11, mito 7, cyto 6, extr_plas 6, mito_pero 5.5,
cysk_plas 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015704)
HIX0015704
HIT000423612
(
AK290815
)
(Monoacylglycerol lipase ABHD12; EC=3.1.1.23; 2-arachidonoylglycerol hydrolase; Abhydrolase domain-containing protein 12;)
genome : 25,281,273 - 25,371,349 (90,077)
query : 1 - 1,415 (1,415/1,415)
13 exons
identity = 0.996
3'(1.000;0.992;1.000;1.000;0.940;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.23
KEGG pathway :
00561 : Glycerolipid metabolism (35)
01100 : Metabolic pathways (1346)
InterPro :
IPR026605 : Monoacylglycerol lipase protein ABHD12
IPR029058 : Alpha/Beta hydrolase fold
IPR029059 : Alpha/beta hydrolase fold-5
GO :
0047372 : Molecular Function : acylglycerol lipase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 18, cyto 6, mito 5, mito_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015704)
HIX0015704
HIT000688392 (
ENST00000576316
)
(Monoacylglycerol lipase ABHD12; EC=3.1.1.23; 2-arachidonoylglycerol hydrolase; Abhydrolase domain-containing protein 12;)
genome : 25,283,899 - 25,290,134 (6,236)
query : 1 - 620 (620/620)
5 exons
identity = 0.994
3'(1.000;1.000;0.952;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.23
KEGG pathway :
00561 : Glycerolipid metabolism (35)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto_nucl 11, cyto 10, cyto_pero 8.16667,
nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015704)
HIX0015704
HIT000595199 (
ENST00000491682
)
(Monoacylglycerol lipase ABHD12; EC=3.1.1.23; 2-arachidonoylglycerol hydrolase; Abhydrolase domain-containing protein 12;)
genome : 25,287,469 - 25,320,385 (32,917)
query : 1 - 814 (814/814)
10 exons
identity = 0.995
3'(1.000;0.952;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.23
KEGG pathway :
00561 : Glycerolipid metabolism (35)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, cysk 10, cyto_nucl 8, extr 5, cysk_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015704)
HIX0015704
HIT000585524 (
ENST00000481556
)
(Monoacylglycerol lipase ABHD12; EC=3.1.1.23; 2-arachidonoylglycerol hydrolase; Abhydrolase domain-containing protein 12;)
genome : 25,287,469 - 25,291,108 (3,640)
query : 1 - 604 (604/604)
5 exons
identity = 0.993
3'(1.000;0.952;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.23
KEGG pathway :
00561 : Glycerolipid metabolism (35)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 10.5, cysk 6, nucl 5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015704)
HIX0015704
HIT000575727 (
ENST00000471287
)
(Monoacylglycerol lipase ABHD12; EC=3.1.1.23; 2-arachidonoylglycerol hydrolase; Abhydrolase domain-containing protein 12;)
genome : 25,289,093 - 25,370,770 (81,678)
query : 1 - 805 (805/805)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.23
KEGG pathway :
00561 : Glycerolipid metabolism (35)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 11.5, nucl 8.5, mito 7, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015704)
HIX0015704
HIT000548327 (
ENST00000450393
)
(Monoacylglycerol lipase ABHD12; EC=3.1.1.23; 2-arachidonoylglycerol hydrolase; Abhydrolase domain-containing protein 12;)
genome : 25,290,135 - 25,320,367 (30,233)
query : 1 - 615 (615/615)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.23
KEGG pathway :
00561 : Glycerolipid metabolism (35)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, cyto 9.5, cyto_nucl 9.5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015704)
HIX0015704
HIT000566102 (
ENST00000461204
)
(Monoacylglycerol lipase ABHD12; EC=3.1.1.23; 2-arachidonoylglycerol hydrolase; Abhydrolase domain-containing protein 12;)
genome : 25,300,835 - 25,371,389 (70,555)
query : 1 - 712 (712/712)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.23
KEGG pathway :
00561 : Glycerolipid metabolism (35)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 16, mito 7, extr 6, mito_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015704)
HIX0174667
HIT000512077 (
ENST00000414143
)
(Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain containing protein.)
genome : 25,348,911 - 25,349,402 (492)
query : 1 - 492 (492/492)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 11.5, cyto_nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174667)
HIX0015705
HIT000035861
(
BC012542
)
(Conserved hypothetical protein.)
genome : 25,388,321 - 25,427,705 (39,385)
query : 4 - 1,808 (1,805/1,861)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;0.989;1.000;1.000;0.999)3'
coverage = 0.983
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 15, cyto_nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015705)
HIX0015705
HIT000208202 (
NM_021067
)
(DNA replication complex GINS protein PSF1; GINS complex subunit 1;)
genome : 25,388,323 - 25,429,191 (40,869)
query : 1 - 3,289 (3,289/3,289)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 12.5, extr 8, nucl 7.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015705)
HIX0015705
HIT000042323
(
D80008
)
Representative transcript
(DNA replication complex GINS protein PSF1; GINS complex subunit 1;)
genome : 25,388,363 - 25,429,191 (40,829)
query : 1 - 3,248 (3,248/3,248)
7 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR005339 : GINS complex, subunit Psf1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 12.5, extr 8, nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015705)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ851817
Mus
sp. (Mouse) : AK013116
Danio
sp. (Zebrafish) : BC083239
Bos
sp. (Cow) : BC134582
Tetraodon
sp. (Tetraodon) : CR721859
Canis
sp. (Dog) : ENSCAFT00000028687
Oryzias
sp. (Medaka) : ENSORLT00000003440
Pongo
sp. (Orangutan) : ENSPPYT00000012527
Takifugu
sp. (Fugu) : SINFRUT00000158142
Rattus
sp. (Rat) : XM_001057757
Macaca
sp. (Macaque) : XM_001107106
Monodelphis
sp. (Opossum) : XM_001382048
Equus
sp. (Horse) : XM_001490637
Pan
sp. (Chimpanzee) : XM_514558
HIX0015705
HIT000108420 (
ENST00000262460
)
(DNA replication complex GINS protein PSF1; GINS complex subunit 1;)
genome : 25,388,363 - 25,429,191 (40,829)
query : 1 - 3,249 (3,249/3,249)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 12.5, extr 8, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015705)
HIX0015705
HIT000489217
(
AK294593
)
(DNA replication complex GINS protein PSF1.)
genome : 25,388,365 - 25,426,978 (38,614)
query : 1 - 1,156 (1,156/1,156)
8 exons
identity = 0.998
5'(1.000;1.000;1.000;0.978;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR005339 : GINS complex, subunit Psf1
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 11.5, extr 8, nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015705)
HIX0015705
HIT000527196 (
ENST00000429262
)
(DNA replication complex GINS protein PSF1.)
genome : 25,388,365 - 25,426,978 (38,614)
query : 1 - 1,156 (1,156/1,156)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, cyto_nucl 9.5, nucl 8, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015705)
HIX0015705
HIT000588721 (
ENST00000484893
)
(DNA replication complex GINS protein PSF1.)
genome : 25,388,367 - 25,398,831 (10,465)
query : 1 - 583 (583/583)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 8, cyto_nucl 7.5, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015705)
HIX0015705
HIT000577791 (
ENST00000473460
)
(DNA replication complex GINS protein PSF1.)
genome : 25,394,093 - 25,397,882 (3,790)
query : 1 - 541 (541/541)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015705)
HIX0015705
HIT000585698 (
ENST00000481735
)
(Conserved hypothetical protein.)
genome : 25,423,660 - 25,433,264 (9,605)
query : 1 - 396 (396/396)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015705)
HIX0203030
HIT000005128
(
AK021854
)
(Ninein-like protein.)
genome : 25,433,462 - 25,439,612 (6,151)
query : 1 - 1,524 (1,524/1,524)
3 exons
identity = 0.996
3'(0.995;0.991;0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto 5, nucl 3, cyto_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203030)
HIX0203030
HIT000569042 (
ENST00000464285
)
(Conserved hypothetical protein.)
genome : 25,433,473 - 25,439,612 (6,140)
query : 1 - 1,514 (1,514/1,514)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto 5, nucl 3, cyto_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203030)
HIX0203030
HIT000599824 (
ENST00000496509
)
(Conserved hypothetical protein.)
genome : 25,436,309 - 25,443,378 (7,070)
query : 1 - 735 (735/735)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, nucl 6, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203030)
HIX0203030
HIT000129936 (
ENST00000336104
)
(Conserved hypothetical protein.)
genome : 25,443,019 - 25,459,663 (16,645)
query : 1 - 439 (439/439)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 8.5, cyto_nucl 8, nucl 6.5,
extr_plas 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203030)
HIX0203030
HIT000018436
(
AK093569
)
(Ninein-like protein;)
genome : 25,458,605 - 25,472,909 (14,305)
query : 1 - 2,626 (2,626/2,626)
6 exons
identity = 0.997
3'(0.998;1.000;1.000;1.000;0.973;0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15.5, cyto 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203030)
HIX0203030
HIT000428164
(
AK309298
)
Representative transcript
(Ninein-like protein.)
genome : 25,459,411 - 25,566,167 (106,757)
query : 1 - 2,386 (2,386/2,386)
16 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;0.965;1.000;1.000;
1.000;0.993;1.000;1.000;1.000;1.000;1.000;
1.000;0.987)5'
coverage = 1.000
InterPro :
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
IPR018247 : EF-Hand 1, calcium-binding site
GO :
0005509 : Molecular Function : calcium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203030)
HIX0203030
HIT000593371 (
ENST00000489780
)
(Conserved hypothetical protein.)
genome : 25,462,474 - 25,472,161 (9,688)
query : 1 - 630 (630/630)
4 exons
identity = 0.994
3'(1.000;1.000;0.965;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 16, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203030)
HIX0203030
HIT000566516 (
ENST00000461642
)
(Conserved hypothetical protein.)
genome : 25,469,619 - 25,477,439 (7,821)
query : 1 - 594 (594/594)
3 exons
identity = 0.993
3'(1.000;0.965;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, mito 6, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203030)
HIX0203030
HIT000488615
(
AK293991
)
(EF-hand domain containing protein.)
genome : 25,472,111 - 25,521,018 (48,908)
query : 1 - 1,735 (1,735/1,735)
11 exons
identity = 0.998
3'(1.000;0.993;1.000;0.994;1.000;1.000;1.000;
1.000;1.000;1.000;0.994)5'
coverage = 1.000
InterPro :
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
IPR018247 : EF-Hand 1, calcium-binding site
GO :
0005509 : Molecular Function : calcium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 12.1667, cyto 8.5,
cyto_pero 6.83333, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203030)
HIX0027763
HIT000050250
(
AK130979
)
Representative transcript
(Hypothetical short protein.)
genome : 25,513,663 - 25,514,148 (486)
query : 1 - 486 (486/486)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 8, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027763)
HIX0213124
HIT000615477 (
ENST00000516074
)
(Non-protein coding transcript.)
genome : 25,591,789 - 25,591,859 (71)
query : 1 - 71 (71/71)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0213124)
HIX0226916
HIT000086237
(
BC003415
)
Representative transcript
(Conserved hypothetical protein.)
genome : 25,594,176 - 25,597,128 (2,953)
query : 1 - 2,952 (2,952/2,969)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 9.5, cyto_nucl 8.83333, extr 8, cyto 7.5,
mito_pero 6.83333, cyto_pero 6.33333, nucl 4, extr_plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226916)
HIX0015699
HIT000052875
(
BC044588
)
(Acetyl-coenzyme A synthetase 2-like, mitochondrial; EC=6.2.1.1; Acetate--CoA ligase 2; Acetyl-CoA synthetase 2; AceCS2; Acyl-CoA synthetase short-chain family member 1; Precursor;)
genome : 24,986,868 - 25,038,743 (51,876)
query : 1 - 3,599 (3,599/3,626)
14 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;0.992;1.000;1.000;
1.000;1.000;1.000;1.000;0.995;1.000;0.997)5'
coverage = 0.997
EC number :
EC 6.2.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00620 : Pyruvate metabolism (62)
00640 : Propanoate metabolism (45)
00680 : Methane metabolism (75)
00720 : Carbon fixation pathways in prokaryotes (41)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR000873 : AMP-dependent synthetase/ligase
IPR011904 : Acetate-CoA ligase
IPR020845 : AMP-binding, conserved site
IPR025110 : AMP-binding enzyme C-terminal domain
GO :
0003824 : Molecular Function : catalytic activity
0003987 : Molecular Function : acetate-CoA ligase activity
0008152 : Biological Process : metabolic process
0016208 : Molecular Function : AMP binding
0019427 : Biological Process : acetyl-CoA biosynthetic process from acetate
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 18.5, cyto_mito 11.5, nucl 4, cyto 3.5, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015699)
HIX0015699
HIT000054104
(
BC055008
)
(Acetyl-coenzyme A synthetase 2-like, mitochondrial; EC=6.2.1.1; Acetate--CoA ligase 2; Acetyl-CoA synthetase 2; AceCS2; Acyl-CoA synthetase short-chain family member 1; Precursor;)
genome : 24,986,868 - 25,038,743 (51,876)
query : 1 - 3,599 (3,599/3,624)
14 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;0.992;1.000;1.000;
1.000;1.000;1.000;1.000;0.995;1.000;0.997)5'
coverage = 0.997
EC number :
EC 6.2.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00620 : Pyruvate metabolism (62)
00640 : Propanoate metabolism (45)
00680 : Methane metabolism (75)
00720 : Carbon fixation pathways in prokaryotes (41)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR000873 : AMP-dependent synthetase/ligase
IPR011904 : Acetate-CoA ligase
IPR020845 : AMP-binding, conserved site
IPR025110 : AMP-binding enzyme C-terminal domain
GO :
0003824 : Molecular Function : catalytic activity
0003987 : Molecular Function : acetate-CoA ligase activity
0008152 : Biological Process : metabolic process
0016208 : Molecular Function : AMP binding
0019427 : Biological Process : acetyl-CoA biosynthetic process from acetate
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 18.5, cyto_mito 11.5, nucl 4, cyto 3.5, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015699)
HIX0015699
HIT000210684 (
NM_032501
)
(Acetyl-coenzyme A synthetase 2-like, mitochondrial; EC=6.2.1.1; Acetate--CoA ligase 2; Acetyl-CoA synthetase 2; AceCS2; Acyl-CoA synthetase short-chain family member 1; Precursor;)
genome : 24,986,866 - 25,038,818 (51,953)
query : 1 - 3,682 (3,682/3,692)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.2.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00620 : Pyruvate metabolism (62)
00640 : Propanoate metabolism (45)
00680 : Methane metabolism (75)
00720 : Carbon fixation pathways in prokaryotes (41)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 18.5, cyto_mito 11.5, nucl 4, cyto 3.5, plas 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015699)
HIX0015699
HIT000723341 (
NM_001252675
)
(Acetyl-coenzyme A synthetase 2-like, mitochondrial; EC=6.2.1.1; Acetate--CoA ligase 2; Acetyl-CoA synthetase 2; AceCS2; Acyl-CoA synthetase short-chain family member 1; Precursor;)
genome : 24,986,866 - 25,038,818 (51,953)
query : 1 - 3,676 (3,676/3,686)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.2.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00620 : Pyruvate metabolism (62)
00640 : Propanoate metabolism (45)
00680 : Methane metabolism (75)
00720 : Carbon fixation pathways in prokaryotes (41)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 18.5, cyto_mito 11.5, nucl 4, cyto 3.5, plas 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015699)
HIX0015699
HIT000723343 (
NM_001252677
)
(Acetyl-coenzyme A synthetase 2-like, mitochondrial; EC=6.2.1.1; Acetate--CoA ligase 2; Acetyl-CoA synthetase 2; AceCS2; Acyl-CoA synthetase short-chain family member 1; Precursor;)
genome : 24,986,866 - 25,038,818 (51,953)
query : 1 - 2,438 (2,438/2,448)
12 exons
identity = 0.998
3'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.2.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00620 : Pyruvate metabolism (62)
00640 : Propanoate metabolism (45)
00680 : Methane metabolism (75)
00720 : Carbon fixation pathways in prokaryotes (41)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 18.5, cyto_mito 11.5, plas 5, cyto 3.5, nucl 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015699)
HIX0015699
HIT000723342 (
NM_001252676
)
(Acetyl-coenzyme A synthetase 2-like, mitochondrial; EC=6.2.1.1; Acetate--CoA ligase 2; Acetyl-CoA synthetase 2; AceCS2; Acyl-CoA synthetase short-chain family member 1; Precursor;)
genome : 24,986,866 - 25,013,342 (26,477)
query : 1 - 3,509 (3,509/3,519)
13 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.988)5'
coverage = 1.000
EC number :
EC 6.2.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00620 : Pyruvate metabolism (62)
00640 : Propanoate metabolism (45)
00680 : Methane metabolism (75)
00720 : Carbon fixation pathways in prokaryotes (41)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 11.5, nucl 7.5, cyto_nucl 7, mito_pero 7,
cyto 5.5, plas 2, E.R. 2, golg 2, E.R._golg 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015699)
HIX0015699
HIT000052180
(
BC039261
)
Representative transcript
(Acetyl-coenzyme A synthetase 2-like, mitochondrial; EC=6.2.1.1; Acetate--CoA ligase 2; Acetyl-CoA synthetase 2; AceCS2; Acyl-CoA synthetase short-chain family member 1; Precursor;)
genome : 24,986,873 - 25,038,776 (51,904)
query : 2 - 3,634 (3,633/3,649)
14 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;0.992;1.000;1.000;
1.000;1.000;1.000;1.000;0.995;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.2.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00620 : Pyruvate metabolism (62)
00640 : Propanoate metabolism (45)
00680 : Methane metabolism (75)
00720 : Carbon fixation pathways in prokaryotes (41)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR000873 : AMP-dependent synthetase/ligase
IPR011904 : Acetate-CoA ligase
IPR020845 : AMP-binding, conserved site
IPR025110 : AMP-binding enzyme C-terminal domain
GO :
0003824 : Molecular Function : catalytic activity
0003987 : Molecular Function : acetate-CoA ligase activity
0008152 : Biological Process : metabolic process
0016208 : Molecular Function : AMP binding
0019427 : Biological Process : acetyl-CoA biosynthetic process from acetate
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 18.5, cyto_mito 11.5, nucl 4, cyto 3.5, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015699)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK146568
Bos
sp. (Cow) : BC114698
Danio
sp. (Zebrafish) : BC159207
Gallus
sp. (Chicken) : BX933603
Gallus
sp. (Chicken) : CR523173
Monodelphis
sp. (Opossum) : ENSMODT00000008034
Oryzias
sp. (Medaka) : ENSORLT00000021867
Pongo
sp. (Orangutan) : ENSPPYT00000012520
Rattus
sp. (Rat) : ENSRNOT00000009627
Takifugu
sp. (Fugu) : SINFRUT00000149956
Takifugu
sp. (Fugu) : SINFRUT00000158168
Macaca
sp. (Macaque) : XM_001099300
Pan
sp. (Chimpanzee) : XM_001149014
Equus
sp. (Horse) : XM_001490974
Canis
sp. (Dog) : XM_534200
HIX0015699
HIT000027851
(
AL832939
)
(Acetyl-coenzyme A synthetase 2-like, mitochondrial; EC=6.2.1.1; Acetate--CoA ligase 2; Acetyl-CoA synthetase 2; AceCS2; Acyl-CoA synthetase short-chain family member 1; Precursor;)
genome : 24,986,873 - 25,038,502 (51,630)
query : 1 - 2,744 (2,744/2,755)
10 exons
identity = 0.997
3'(0.997;1.000;1.000;1.000;0.992;1.000;1.000;
0.995;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.2.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00620 : Pyruvate metabolism (62)
00640 : Propanoate metabolism (45)
00680 : Methane metabolism (75)
00720 : Carbon fixation pathways in prokaryotes (41)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR000873 : AMP-dependent synthetase/ligase
IPR025110 : AMP-binding enzyme C-terminal domain
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 12.5, nucl 5.5, plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015699)
HIX0015699
HIT000123512 (
ENST00000323482
)
(Acetyl-coenzyme A synthetase 2-like, mitochondrial; EC=6.2.1.1; Acetate--CoA ligase 2; Acetyl-CoA synthetase 2; AceCS2; Acyl-CoA synthetase short-chain family member 1; Precursor;)
genome : 24,986,868 - 25,038,818 (51,951)
query : 1 - 3,680 (3,680/3,680)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.2.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00620 : Pyruvate metabolism (62)
00640 : Propanoate metabolism (45)
00680 : Methane metabolism (75)
00720 : Carbon fixation pathways in prokaryotes (41)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 18.5, cyto_mito 11.5, nucl 4, cyto 3.5, plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015699)
HIX0015699
HIT000001561
(
AB058749
)
(Acetyl-coenzyme A synthetase 2-like, mitochondrial; EC=6.2.1.1; Acetate--CoA ligase 2; Acetyl-CoA synthetase 2; AceCS2; Acyl-CoA synthetase short-chain family member 1; Precursor;)
genome : 24,986,868 - 25,002,129 (15,262)
query : 1 - 2,597 (2,597/2,597)
9 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.2.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00620 : Pyruvate metabolism (62)
00640 : Propanoate metabolism (45)
00680 : Methane metabolism (75)
00720 : Carbon fixation pathways in prokaryotes (41)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 13.5, nucl 9.5, cysk 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015699)
HIX0015699
HIT000047439
(
AK127566
)
(Acetyl-coenzyme A synthetase 2-like, mitochondrial isoform 2 precursor.)
genome : 24,986,874 - 25,038,764 (51,891)
query : 1 - 2,376 (2,376/2,376)
12 exons
identity = 0.997
3'(0.993;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.2.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00620 : Pyruvate metabolism (62)
00640 : Propanoate metabolism (45)
00680 : Methane metabolism (75)
00720 : Carbon fixation pathways in prokaryotes (41)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR000873 : AMP-dependent synthetase/ligase
IPR011904 : Acetate-CoA ligase
IPR020845 : AMP-binding, conserved site
GO :
0003824 : Molecular Function : catalytic activity
0003987 : Molecular Function : acetate-CoA ligase activity
0008152 : Biological Process : metabolic process
0016208 : Molecular Function : AMP binding
0019427 : Biological Process : acetyl-CoA biosynthetic process from acetate
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 19.5, cyto_mito 12, plas 5, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015699)
HIX0015699
HIT000044931
(
AK125058
)
(Acetyl-coenzyme A synthetase 2-like, mitochondrial; EC=6.2.1.1; Acetate--CoA ligase 2; Acetyl-CoA synthetase 2; AceCS2; Acyl-CoA synthetase short-chain family member 1; Precursor;)
genome : 24,986,874 - 25,013,308 (26,435)
query : 1 - 4,877 (4,877/4,877)
12 exons
identity = 0.997
3'(0.998;1.000;1.000;1.000;0.992;1.000;1.000;
0.993;1.000;1.000;1.000;0.996)5'
coverage = 1.000
EC number :
EC 6.2.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00620 : Pyruvate metabolism (62)
00640 : Propanoate metabolism (45)
00680 : Methane metabolism (75)
00720 : Carbon fixation pathways in prokaryotes (41)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR000873 : AMP-dependent synthetase/ligase
IPR011904 : Acetate-CoA ligase
IPR020845 : AMP-binding, conserved site
IPR025110 : AMP-binding enzyme C-terminal domain
GO :
0003824 : Molecular Function : catalytic activity
0003987 : Molecular Function : acetate-CoA ligase activity
0008152 : Biological Process : metabolic process
0016208 : Molecular Function : AMP binding
0019427 : Biological Process : acetyl-CoA biosynthetic process from acetate
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 23, mito_pero 3.66667, E.R._mito 3.16667, nucl 3,
mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015699)
HIX0015699
HIT000636547 (
ENST00000537502
)
(Acetyl-coenzyme A synthetase 2-like, mitochondrial; EC=6.2.1.1; Acetate--CoA ligase 2; Acetyl-CoA synthetase 2; AceCS2; Acyl-CoA synthetase short-chain family member 1; Precursor;)
genome : 24,986,874 - 25,013,308 (26,435)
query : 1 - 4,877 (4,877/4,877)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.2.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00620 : Pyruvate metabolism (62)
00640 : Propanoate metabolism (45)
00680 : Methane metabolism (75)
00720 : Carbon fixation pathways in prokaryotes (41)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 23, mito_pero 3.66667, E.R._mito 3.16667, nucl 3,
mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015699)
HIX0015699
HIT000017162
(
AK092295
)
(Acetyl-coenzyme A synthetase 2-like, mitochondrial; EC=6.2.1.1; Acetate--CoA ligase 2; Acetyl-CoA synthetase 2; AceCS2; Acyl-CoA synthetase short-chain family member 1; Precursor;)
genome : 24,986,874 - 25,011,522 (24,649)
query : 1 - 3,051 (3,051/3,051)
12 exons
identity = 0.982
3'(0.979;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.877;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.2.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00620 : Pyruvate metabolism (62)
00640 : Propanoate metabolism (45)
00680 : Methane metabolism (75)
00720 : Carbon fixation pathways in prokaryotes (41)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR000873 : AMP-dependent synthetase/ligase
IPR020845 : AMP-binding, conserved site
IPR025110 : AMP-binding enzyme C-terminal domain
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, cyto_mito 12, nucl 7, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015699)
HIX0015699
HIT000011089
(
AK027817
)
(Acetyl-coenzyme A synthetase 2-like, mitochondrial; EC=6.2.1.1; Acetate--CoA ligase 2; Acetyl-CoA synthetase 2; AceCS2; Acyl-CoA synthetase short-chain family member 1; Precursor;)
genome : 24,986,874 - 25,000,784 (13,911)
query : 11 - 2,497 (2,487/2,497)
8 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.996
EC number :
EC 6.2.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00620 : Pyruvate metabolism (62)
00640 : Propanoate metabolism (45)
00680 : Methane metabolism (75)
00720 : Carbon fixation pathways in prokaryotes (41)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR000873 : AMP-dependent synthetase/ligase
IPR025110 : AMP-binding enzyme C-terminal domain
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 15, mito 5.5, E.R._mito 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015699)
HIX0015699
HIT000530736 (
ENST00000432802
)
(Acetyl-coenzyme A synthetase 2-like, mitochondrial; EC=6.2.1.1; Acetate--CoA ligase 2; Acetyl-CoA synthetase 2; AceCS2; Acyl-CoA synthetase short-chain family member 1; Precursor;)
genome : 24,987,496 - 25,039,616 (52,121)
query : 1 - 2,606 (2,606/2,606)
12 exons
identity = 0.998
3'(0.947;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.2.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00620 : Pyruvate metabolism (62)
00640 : Propanoate metabolism (45)
00680 : Methane metabolism (75)
00720 : Carbon fixation pathways in prokaryotes (41)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 18.5, cyto_mito 11.5, plas 5, cyto 3.5, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015699)
HIX0015699
HIT000490930
(
AK296306
)
(Acetate-CoA ligase family protein.)
genome : 24,988,144 - 25,013,337 (25,194)
query : 3 - 2,228 (2,226/2,228)
13 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;0.992;1.000;1.000;
1.000;1.000;1.000;1.000;0.995;0.988)5'
coverage = 0.999
InterPro :
IPR000873 : AMP-dependent synthetase/ligase
IPR011904 : Acetate-CoA ligase
IPR020845 : AMP-binding, conserved site
IPR025110 : AMP-binding enzyme C-terminal domain
GO :
0003824 : Molecular Function : catalytic activity
0003987 : Molecular Function : acetate-CoA ligase activity
0008152 : Biological Process : metabolic process
0016208 : Molecular Function : AMP binding
0019427 : Biological Process : acetyl-CoA biosynthetic process from acetate
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15.5, cyto_mito 10.6667, nucl 6, mito 4.5,
mito_pero 4.33333, pero 2, extr_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015699)
HIX0015699
HIT000641663 (
ENST00000542618
)
(Acetyl-coenzyme A synthetase 2-like, mitochondrial; EC=6.2.1.1; Acetate--CoA ligase 2; Acetyl-CoA synthetase 2; AceCS2; Acyl-CoA synthetase short-chain family member 1; Precursor;)
genome : 24,988,144 - 25,013,339 (25,196)
query : 1 - 2,228 (2,228/2,228)
13 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.988)5'
coverage = 1.000
EC number :
EC 6.2.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00620 : Pyruvate metabolism (62)
00640 : Propanoate metabolism (45)
00680 : Methane metabolism (75)
00720 : Carbon fixation pathways in prokaryotes (41)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 11.5, nucl 7.5, cyto_nucl 7, mito_pero 7,
cyto 5.5, plas 2, E.R. 2, golg 2, E.R._golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015699)
HIX0015699
HIT000433306
(
AK314440
)
(Acetyl-coenzyme A synthetase 2-like, mitochondrial; EC=6.2.1.1; Acetate--CoA ligase 2; Acetyl-CoA synthetase 2; AceCS2; Acyl-CoA synthetase short-chain family member 1; Precursor;)
genome : 24,988,398 - 25,038,741 (50,344)
query : 1 - 2,072 (2,072/2,072)
14 exons
identity = 1.000
3'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.2.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00620 : Pyruvate metabolism (62)
00640 : Propanoate metabolism (45)
00680 : Methane metabolism (75)
00720 : Carbon fixation pathways in prokaryotes (41)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR000873 : AMP-dependent synthetase/ligase
IPR011904 : Acetate-CoA ligase
IPR020845 : AMP-binding, conserved site
IPR025110 : AMP-binding enzyme C-terminal domain
GO :
0003824 : Molecular Function : catalytic activity
0003987 : Molecular Function : acetate-CoA ligase activity
0008152 : Biological Process : metabolic process
0016208 : Molecular Function : AMP binding
0019427 : Biological Process : acetyl-CoA biosynthetic process from acetate
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 18.5, cyto_mito 11.5, nucl 4, cyto 3.5, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015699)
HIX0015699
HIT000340755
(
BC114612
)
(Acetyl-coenzyme A synthetase 2-like, mitochondrial; EC=6.2.1.1; Acetate--CoA ligase 2; Acetyl-CoA synthetase 2; AceCS2; Acyl-CoA synthetase short-chain family member 1; Precursor;)
genome : 24,994,269 - 25,038,597 (44,329)
query : 13 - 1,353 (1,341/1,359)
10 exons
identity = 0.999
3'(0.967;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.987
EC number :
EC 6.2.1.1
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00620 : Pyruvate metabolism (62)
00640 : Propanoate metabolism (45)
00680 : Methane metabolism (75)
00720 : Carbon fixation pathways in prokaryotes (41)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR000873 : AMP-dependent synthetase/ligase
IPR020845 : AMP-binding, conserved site
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 11.5, nucl 5.5, mito 3, pero 3,
mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015699)
HIX0015702
HIT000309199 (
ENST00000354989
)
(Ectonucleoside triphosphate diphosphohydrolase 6; NTPDase 6; EC=3.6.1.6; CD39 antigen-like 2;)
genome : 25,176,329 - 25,207,365 (31,037)
query : 1 - 2,708 (2,708/2,708)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 20, plas 2, extr 2, nucl 2, E.R. 2, lyso 2,
golg 2, extr_plas 2, E.R._golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015702)
HIX0015702
HIT000313475 (
ENST00000360031
)
(Ectonucleoside triphosphate diphosphohydrolase 6; NTPDase 6; EC=3.6.1.6; CD39 antigen-like 2;)
genome : 25,176,337 - 25,207,365 (31,029)
query : 1 - 2,766 (2,766/2,766)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 12, mito 5, E.R. 5, E.R._mito 5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015702)
HIX0015702
HIT000198242 (
NM_001247
)
(Ectonucleoside triphosphate diphosphohydrolase 6; NTPDase 6; EC=3.6.1.6; CD39 antigen-like 2;)
genome : 25,176,339 - 25,207,360 (31,022)
query : 1 - 2,762 (2,762/2,787)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;0.987;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 12, mito 5, E.R. 5, E.R._mito 5, cyto 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015702)
HIX0015702
HIT000485936 (
NM_001114089
)
(Ectonucleoside triphosphate diphosphohydrolase 6 isoform 2.)
genome : 25,176,339 - 25,207,360 (31,022)
query : 1 - 2,693 (2,693/2,718)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;0.987;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 20, plas 4, nucl 2, lyso 2, golg 2, cysk_plas 2,
cyto_plas 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015702)
HIX0015702
HIT000498410
(
AK303786
)
(Ectonucleoside triphosphate diphosphohydrolase 6 isoform 2.)
genome : 25,176,348 - 25,206,608 (30,261)
query : 1 - 1,929 (1,929/1,929)
14 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.987;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
InterPro :
IPR000407 : Nucleoside phosphatase GDA1/CD39
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 21, plas 2, nucl 2, E.R. 2, golg 2, E.R._golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015702)
HIX0015702
HIT000357932 (
ENST00000376652
)
(Ectonucleoside triphosphate diphosphohydrolase 6; NTPDase 6; EC=3.6.1.6; CD39 antigen-like 2;)
genome : 25,176,356 - 25,207,365 (31,010)
query : 1 - 2,750 (2,750/2,750)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 12, mito 5, E.R. 5, E.R._mito 5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015702)
HIX0015702
HIT000307023
(
CR936750
)
(Ectonucleoside triphosphate diphosphohydrolase 6; NTPDase 6; EC=3.6.1.6; CD39 antigen-like 2;)
genome : 25,176,358 - 25,207,351 (30,994)
query : 1 - 2,339 (2,339/2,355)
13 exons
identity = 0.997
5'(1.000;1.000;0.993;0.987;1.000;0.988;1.000;
0.985;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
InterPro :
IPR000407 : Nucleoside phosphatase GDA1/CD39
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 8.5, cyto_nucl 6.5, extr 4, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015702)
HIX0015702
HIT000487880
(
AK293256
)
(Ectonucleoside triphosphate diphosphohydrolase 6 isoform 2.)
genome : 25,176,362 - 25,206,369 (30,008)
query : 1 - 1,719 (1,719/1,719)
14 exons
identity = 0.999
5'(1.000;1.000;0.987;1.000;0.987;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
InterPro :
IPR000407 : Nucleoside phosphatase GDA1/CD39
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 23, golg 3, E.R. 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015702)
HIX0015702
HIT000531351 (
ENST00000433417
)
(Ectonucleoside triphosphate diphosphohydrolase 6; NTPDase 6; EC=3.6.1.6; CD39 antigen-like 2;)
genome : 25,176,366 - 25,203,606 (27,241)
query : 1 - 940 (940/940)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015702)
HIX0015702
HIT000048285
(
AK128412
)
(Ectonucleoside triphosphate diphosphohydrolase 6 isoform 2.)
genome : 25,176,368 - 25,207,350 (30,983)
query : 2 - 3,150 (3,149/3,150)
8 exons
identity = 0.995
5'(1.000;1.000;1.000;0.987;0.991;1.000;1.000;
0.998)3'
coverage = 1.000
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 5.5, cyto_nucl 5.33333, cyto 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015702)
HIX0015702
HIT000494652
(
AK300028
)
(Ectonucleoside triphosphate diphosphohydrolase 6 isoform 2.)
genome : 25,176,368 - 25,206,538 (30,171)
query : 1 - 1,431 (1,431/1,431)
12 exons
identity = 0.998
5'(1.000;1.000;0.993;0.987;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
InterPro :
IPR000407 : Nucleoside phosphatase GDA1/CD39
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16.5, nucl 8.5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015702)
HIX0015702
HIT000063509
(
AF039916
)
(Ectonucleoside triphosphate diphosphohydrolase 6; NTPDase 6; EC=3.6.1.6; CD39 antigen-like 2;)
genome : 25,176,372 - 25,207,360 (30,989)
query : 1 - 2,728 (2,728/2,762)
15 exons
identity = 0.999
5'(1.000;1.000;1.000;0.987;1.000;0.987;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.998)3'
coverage = 1.000
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
InterPro :
IPR000407 : Nucleoside phosphatase GDA1/CD39
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 12, mito 5, E.R. 5, E.R._mito 5, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015702)
HIX0015702
HIT000495138
(
AK300514
)
(Ectonucleoside triphosphate diphosphohydrolase 6 isoform 2.)
genome : 25,176,380 - 25,206,524 (30,145)
query : 1 - 1,350 (1,350/1,350)
12 exons
identity = 0.999
5'(1.000;1.000;0.987;1.000;1.000;0.988;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
InterPro :
IPR000407 : Nucleoside phosphatase GDA1/CD39
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015702)
HIX0015702
HIT000307038
(
CR936765
)
(Ectonucleoside triphosphate diphosphohydrolase 6 isoform 1.)
genome : 25,176,389 - 25,207,349 (30,961)
query : 1 - 2,741 (2,741/2,949)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;0.987;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.932
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
InterPro :
IPR000407 : Nucleoside phosphatase GDA1/CD39
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 13, mito 5, E.R. 5, E.R._mito 5, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015702)
HIX0015702
HIT000028889
(
AL834158
)
Representative transcript
(Ectonucleoside triphosphate diphosphohydrolase 6 isoform 2.)
genome : 25,176,391 - 25,207,349 (30,959)
query : 1 - 2,630 (2,630/2,670)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;0.987;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
InterPro :
IPR000407 : Nucleoside phosphatase GDA1/CD39
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 20, plas 4, nucl 2, lyso 2, golg 2, cysk_plas 2,
cyto_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015702)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AJ277748
Gallus
sp. (Chicken) : AJ719561
Mus
sp. (Mouse) : BC028318
Danio
sp. (Zebrafish) : BC092988
Tetraodon
sp. (Tetraodon) : CR692977
Bos
sp. (Cow) : ENSBTAT00000013034
Monodelphis
sp. (Opossum) : ENSMODT00000008069
Oryzias
sp. (Medaka) : ENSORLT00000003739
Pongo
sp. (Orangutan) : ENSPPYT00000012522
Takifugu
sp. (Fugu) : SINFRUT00000158159
Macaca
sp. (Macaque) : XM_001099807
Equus
sp. (Horse) : XM_001487835
Pan
sp. (Chimpanzee) : XM_514557
Canis
sp. (Dog) : XM_542683
HIX0015702
HIT000531193 (
ENST00000433259
)
(Ectonucleoside triphosphate diphosphohydrolase 6; NTPDase 6; EC=3.6.1.6; CD39 antigen-like 2;)
genome : 25,176,393 - 25,207,365 (30,973)
query : 1 - 2,654 (2,654/2,654)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 12, mito 5, E.R. 5, E.R._mito 5, cyto 4.5,
cyto_nucl 3.5, E.R._golg 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015702)
HIX0015702
HIT000040049
(
BC025980
)
(Ectonucleoside triphosphate diphosphohydrolase 6; NTPDase 6; EC=3.6.1.6; CD39 antigen-like 2;)
genome : 25,176,399 - 25,207,351 (30,953)
query : 1 - 2,689 (2,689/2,756)
15 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;0.987;1.000;
1.000;0.988;1.000;1.000;1.000;1.000;1.000;
0.998)3'
coverage = 1.000
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
InterPro :
IPR000407 : Nucleoside phosphatase GDA1/CD39
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 12, mito 5, E.R. 5, E.R._mito 5, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015702)
HIX0015702
HIT000251799
(
AY327581
)
(Ectonucleoside triphosphate diphosphohydrolase 6; NTPDase 6; EC=3.6.1.6; CD39 antigen-like 2;)
genome : 25,176,408 - 25,207,349 (30,942)
query : 1 - 2,681 (2,681/2,697)
15 exons
identity = 0.997
5'(0.979;0.986;1.000;1.000;0.993;0.987;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.998)3'
coverage = 1.000
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
InterPro :
IPR000407 : Nucleoside phosphatase GDA1/CD39
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 12, E.R. 5, cyto 4.5, E.R._mito 4.5, mito 4,
cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015702)
HIX0015702
HIT000492578
(
AK297954
)
(Ectonucleoside triphosphate diphosphohydrolase 6 isoform 2.)
genome : 25,176,466 - 25,206,221 (29,756)
query : 1 - 1,539 (1,539/1,539)
15 exons
identity = 0.998
5'(1.000;0.986;1.000;1.000;0.993;0.987;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
InterPro :
IPR000407 : Nucleoside phosphatase GDA1/CD39
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 12, E.R. 5, cyto 4.5, E.R._mito 4.5, mito 4,
cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015702)
HIX0015702
HIT000081726
(
AK074691
)
(Ectonucleoside triphosphate diphosphohydrolase 6 isoform 2.)
genome : 25,187,180 - 25,207,349 (20,170)
query : 1 - 2,564 (2,564/2,564)
14 exons
identity = 0.997
5'(0.979;0.994;1.000;0.986;0.987;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
InterPro :
IPR000407 : Nucleoside phosphatase GDA1/CD39
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 12, E.R. 5, cyto 4.5, E.R._mito 4.5, mito 4,
cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015702)
HIX0015702
HIT000545811 (
ENST00000447877
)
(Ectonucleoside triphosphate diphosphohydrolase 6; NTPDase 6; EC=3.6.1.6; CD39 antigen-like 2;)
genome : 25,187,980 - 25,205,953 (17,974)
query : 1 - 932 (932/932)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10, cyto 8.5, cyto_nucl 8.5, nucl 7.5, extr 3,
pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015702)
HIX0015702
HIT000357946 (
ENST00000376666
)
(Ectonucleoside triphosphate diphosphohydrolase 6; NTPDase 6; EC=3.6.1.6; CD39 antigen-like 2;)
genome : 25,193,976 - 25,207,365 (13,390)
query : 1 - 2,100 (2,100/2,100)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 5.5, cyto_nucl 5.33333, cyto 4, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015702)
HIX0015702
HIT000489866
(
AK295242
)
(Ectonucleoside triphosphate diphosphohydrolase 6; NTPDase 6; EC=3.6.1.6; CD39 antigen-like 2;)
genome : 25,195,512 - 25,206,684 (11,173)
query : 1 - 1,198 (1,198/1,198)
9 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.998)3'
coverage = 1.000
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
InterPro :
IPR000407 : Nucleoside phosphatase GDA1/CD39
GO :
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, nucl 10, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015702)
HIX0015702
HIT000575906 (
ENST00000471478
)
(Ectonucleoside triphosphate diphosphohydrolase 6; NTPDase 6; EC=3.6.1.6; CD39 antigen-like 2;)
genome : 25,197,281 - 25,205,338 (8,058)
query : 12 - 991 (980/991)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.989
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, cyto 13.5, nucl 11.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015702)
HIX0015702
HIT000044498
(
AK124625
)
(Ectonucleoside triphosphate diphosphohydrolase 6; NTPDase 6; EC=3.6.1.6; CD39 antigen-like 2;)
genome : 25,200,612 - 25,207,349 (6,738)
query : 1 - 4,388 (4,388/4,388)
4 exons
identity = 0.999
5'(0.999;1.000;1.000;0.998)3'
coverage = 1.000
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 5.5, cyto_nucl 5.33333, cyto 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015702)
HIX0015702
HIT000589715 (
ENST00000485936
)
(Ectonucleoside triphosphate diphosphohydrolase 6; NTPDase 6; EC=3.6.1.6; CD39 antigen-like 2;)
genome : 25,202,428 - 25,207,365 (4,938)
query : 1 - 2,588 (2,588/2,588)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 5.5, cyto_nucl 5.33333, cyto 4, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015702)
HIX0015702
HIT000018887
(
AK094030
)
(Ectonucleoside triphosphate diphosphohydrolase 6; NTPDase 6; EC=3.6.1.6; CD39 antigen-like 2;)
genome : 25,202,428 - 25,207,350 (4,923)
query : 1 - 2,573 (2,573/2,573)
4 exons
identity = 0.998
5'(0.998;1.000;1.000;0.997)3'
coverage = 1.000
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 5.5, cyto_nucl 5.33333, cyto 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015702)
HIX0015702
HIT000593756 (
ENST00000490187
)
(Conserved hypothetical protein.)
genome : 25,205,267 - 25,207,365 (2,099)
query : 1 - 1,918 (1,918/1,918)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 5.5, cyto_nucl 5.33333, cyto 4, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015702)
HIX0015702
HIT000020563
(
AK095708
)
(Conserved hypothetical protein.)
genome : 25,205,267 - 25,207,349 (2,083)
query : 1 - 1,902 (1,902/1,902)
2 exons
identity = 0.999
5'(0.999;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 5.5, cyto_nucl 5.33333, cyto 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0015702)
HIX0226974
HIT000051689
(
BC036380
)
(Ninein-like protein;)
genome : 25,433,333 - 25,507,241 (73,909)
query : 9 - 4,924 (4,916/4,955)
23 exons
identity = 0.996
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
0.992;0.996;1.000;1.000;1.000;0.965;1.000;
1.000;1.000;1.000;1.000;0.995;1.000;1.000;
1.000;0.995)5'
coverage = 0.998
InterPro :
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
IPR018247 : EF-Hand 1, calcium-binding site
GO :
0005509 : Molecular Function : calcium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 18, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226974)
HIX0226974
HIT000209773 (
NM_025176
)
(Ninein-like protein;)
genome : 25,433,340 - 25,566,153 (132,814)
query : 1 - 4,970 (4,970/4,979)
24 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.965;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 18, cyto 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226974)
HIX0226974
HIT000111778 (
ENST00000278886
)
(Ninein-like protein;)
genome : 25,433,341 - 25,566,153 (132,813)
query : 1 - 4,969 (4,969/4,969)
24 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.965;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 18, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226974)
HIX0226974
HIT000520450 (
ENST00000422516
)
(Ninein-like protein.)
genome : 25,433,341 - 25,566,153 (132,813)
query : 1 - 3,922 (3,922/3,922)
23 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.965;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 17.5, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226974)
HIX0226974
HIT000000697
(
AB023197
)
Representative transcript
(Ninein-like protein;)
genome : 25,433,462 - 25,566,153 (132,692)
query : 1 - 4,848 (4,848/4,848)
24 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.965;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 18, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226974)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK129253
Canis
sp. (Dog) : ENSCAFT00000007092
Equus
sp. (Horse) : ENSECAT00000020967
Oryzias
sp. (Medaka) : ENSORLT00000003402
Pongo
sp. (Orangutan) : ENSPPYT00000012528
Tetraodon
sp. (Tetraodon) : GSTENT00025005001
Takifugu
sp. (Fugu) : SINFRUT00000158128
Rattus
sp. (Rat) : XM_001060198
Pan
sp. (Chimpanzee) : XM_001150168
Monodelphis
sp. (Opossum) : XM_001382047
Danio
sp. (Zebrafish) : XM_685326
Macaca
sp. (Macaque) : XR_012538
HIX0226974
HIT000558024
(
EU718622
)
(Ninein-like protein.)
genome : 25,433,462 - 25,566,153 (132,692)
query : 1 - 3,801 (3,801/3,801)
23 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.965;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
IPR018247 : EF-Hand 1, calcium-binding site
GO :
0005509 : Molecular Function : calcium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 17.5, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226974)
HIX0203043
HIT000028028
(
AL833116
)
Representative transcript
(N-acylneuraminate-9-phosphatase; EC=3.1.3.29; Haloacid dehalogenase-like hydrolase domain-containing protein 4; Neu5Ac-9-Pase;)
genome : 25,593,571 - 25,604,621 (11,051)
query : 2 - 3,774 (3,773/3,811)
2 exons
identity = 0.999
3'(0.999)5'
coverage = 0.998
EC number :
EC 3.1.3.29
KEGG pathway :
00520 : Amino sugar and nucleotide sugar metabolism (92)
01100 : Metabolic pathways (1346)
InterPro :
IPR006439 : HAD hydrolase, subfamily IA
IPR011950 : HAD-superfamily hydrolase, subfamily IA, CTE7
IPR023214 : HAD-like domain
GO :
0008152 : Biological Process : metabolic process
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 12, extr 9, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203043)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ720390
Mus
sp. (Mouse) : BC083086
Rattus
sp. (Rat) : BC087587
Oryzias
sp. (Medaka) : ENSORLT00000001054
Pongo
sp. (Orangutan) : ENSPPYT00000012529
Tetraodon
sp. (Tetraodon) : GSTENT00003817001
Takifugu
sp. (Fugu) : SINFRUT00000142123
Macaca
sp. (Macaque) : XM_001101196
Pan
sp. (Chimpanzee) : XM_001150653
Monodelphis
sp. (Opossum) : XM_001382046
Equus
sp. (Horse) : XM_001490677
Danio
sp. (Zebrafish) : XM_001922849
Canis
sp. (Dog) : XM_845120
HIX0203043
HIT000213925 (
NM_152667
)
(N-acylneuraminate-9-phosphatase; EC=3.1.3.29; Haloacid dehalogenase-like hydrolase domain-containing protein 4; Neu5Ac-9-Pase;)
genome : 25,593,571 - 25,604,648 (11,078)
query : 1 - 3,801 (3,801/3,806)
2 exons
identity = 1.000
3'(1.000)5'
coverage = 0.999
EC number :
EC 3.1.3.29
KEGG pathway :
00520 : Amino sugar and nucleotide sugar metabolism (92)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 12, extr 9, nucl 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203043)
HIX0203043
HIT000116847 (
ENST00000304788
)
(N-acylneuraminate-9-phosphatase; EC=3.1.3.29; Haloacid dehalogenase-like hydrolase domain-containing protein 4; Neu5Ac-9-Pase;)
genome : 25,593,571 - 25,604,811 (11,241)
query : 1 - 3,964 (3,964/3,964)
2 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.29
KEGG pathway :
00520 : Amino sugar and nucleotide sugar metabolism (92)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 12, extr 9, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203043)
HIX0203043
HIT000039625
(
BC022552
)
(N-acylneuraminate-9-phosphatase; EC=3.1.3.29; Haloacid dehalogenase-like hydrolase domain-containing protein 4; Neu5Ac-9-Pase;)
genome : 25,595,001 - 25,604,614 (9,614)
query : 1 - 2,337 (2,337/2,352)
2 exons
identity = 0.998
3'(0.998)5'
coverage = 1.000
EC number :
EC 3.1.3.29
KEGG pathway :
00520 : Amino sugar and nucleotide sugar metabolism (92)
01100 : Metabolic pathways (1346)
InterPro :
IPR006439 : HAD hydrolase, subfamily IA
IPR011950 : HAD-superfamily hydrolase, subfamily IA, CTE7
IPR023214 : HAD-like domain
GO :
0008152 : Biological Process : metabolic process
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 12, extr 9, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203043)
HIX0203043
HIT000012086
(
AK055472
)
(N-acylneuraminate-9-phosphatase; EC=3.1.3.29; Haloacid dehalogenase-like hydrolase domain-containing protein 4; Neu5Ac-9-Pase;)
genome : 25,595,050 - 25,604,615 (9,566)
query : 1 - 2,289 (2,289/2,289)
2 exons
identity = 0.998
3'(0.998)5'
coverage = 1.000
EC number :
EC 3.1.3.29
KEGG pathway :
00520 : Amino sugar and nucleotide sugar metabolism (92)
01100 : Metabolic pathways (1346)
InterPro :
IPR006439 : HAD hydrolase, subfamily IA
IPR011950 : HAD-superfamily hydrolase, subfamily IA, CTE7
IPR023214 : HAD-like domain
GO :
0008152 : Biological Process : metabolic process
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 12, extr 9, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203043)
HIX0196754
pHIT000120966 ( pHIT000120966 )
Representative transcript
(Hypothetical short protein.)
genome : 24,439,318 - 24,450,792 (11,475)
query : 1 - 219 (219/219)
3 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0196754)
CAGE tag :
T20R0174496D
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : XM_001252435
HIX0196285
pHIT000120975 ( pHIT000120975 )
Representative transcript
(Conserved hypothetical protein.)
genome : 25,065,763 - 25,080,259 (14,497)
query : 1 - 510 (510/510)
3 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0196285)
CAGE tag :
T20F017DAFEF
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : XR_012278
Pan
sp. (Chimpanzee) : XR_024021
HIX0196757
pHIT000120976 ( pHIT000120976 )
Representative transcript
(Conserved hypothetical protein.)
genome : 25,110,664 - 25,126,320 (15,657)
query : 1 - 849 (849/849)
5 exons
InterPro :
IPR006954 : Moulting cycle MLT-10-like protein
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0196757)
CAGE tag :
T20F017DAFEF
Ortholog candidate ( ->
Evola
)
Takifugu
sp. (Fugu) : SINFRUT00000140968
Macaca
sp. (Macaque) : XM_001106654
AL133466.22
24000001-24053788 F +
NCBI
AL110503.2
24053789-24215213 F +
NCBI
AL109830.11
24215214-24276885 F +
NCBI
AL158090.3
24276886-24311879 F +
NCBI
AL034426.5
24311880-24460421 F +
NCBI
AL157413.18
24460422-24593528 F +
NCBI
AL049594.4
24593529-24750219 F +
NCBI
AL121925.10
24750220-24789379 F +
NCBI
AL353582.16
24789380-24904830 F +
NCBI
AL035661.16
24904831-25008411 F +
NCBI
AL080312.14
25008412-25102971 F +
NCBI
AL035252.5
25102972-25211358 F +
NCBI
AL121772.19
25211359-25286757 F +
NCBI
AL353812.13
25286758-25416351 F +
NCBI
AL031672.13
25416352-25517309 F +
NCBI
AL161802.15
25517310-25574324 F +
NCBI
AL031673.19
25574325-25600000 F +
NCBI