bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0163114
HIT000548485 (
ENST00000450551
)
(Hypothetical protein.)
genome : 22,156,208 - 22,753,977 (597,770)
query : 1 - 636 (636/636)
5 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 11.5, cyto 10.5, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0163114)
HIX0162857
HIT000537743 (
ENST00000439809
)
(Cytochrome b/b6, N-terminal domain containing protein.)
genome : 22,539,925 - 22,540,116 (192)
query : 1 - 192 (192/192)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162857)
HIX0162361
HIT000516947 (
ENST00000419013
)
(Hypothetical short protein.)
genome : 22,600,466 - 22,704,876 (104,411)
query : 1 - 569 (569/569)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 14, nucl 7.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162361)
HIX0161955
HIT000438287_03
(
DQ571756
)
Representative transcript
(Non-protein coding transcript.)
genome : 22,642,787 - 22,642,816 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161955)
HIX0162703
HIT000531363 (
ENST00000433429
)
(Hypothetical short protein.)
genome : 22,759,351 - 22,761,160 (1,810)
query : 1 - 440 (440/440)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12, cyto 12, mito 6, extr_plas 6, cyto_pero 6,
cyto_plas 6, cyto_golg 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162703)
HIX0161779
HIT000519515 (
ENST00000421581
)
(Hypothetical short protein.)
genome : 23,240,997 - 23,313,708 (72,712)
query : 1 - 717 (717/717)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 7.5, cyto_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161779)
HIX0161779
HIT000530546 (
ENST00000432612
)
(Hypothetical short protein.)
genome : 23,249,981 - 23,253,293 (3,313)
query : 1 - 533 (533/533)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161779)
HIX0161779
HIT000538719 (
ENST00000440785
)
(Non-protein coding transcript.)
genome : 23,253,475 - 23,421,927 (168,453)
query : 1 - 506 (506/506)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161779)
HIX0030367
HIT000097559
(
BC043238
)
Representative transcript
(Hypothetical short protein.)
genome : 23,281,095 - 23,283,553 (2,459)
query : 1 - 2,459 (2,459/2,474)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030367)
HIX0020637
HIT000007898
(
AK024624
)
Representative transcript
(Conserved hypothetical protein.)
genome : 23,348,658 - 23,349,587 (930)
query : 1 - 930 (930/946)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 16, extr 5, mito 4, nucl 3, cyto 3, cyto_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020637)
HIX0162468
HIT000521640 (
ENST00000423706
)
(Hypothetical short protein.)
genome : 23,553,535 - 23,554,915 (1,381)
query : 1 - 525 (525/525)
4 exons
identity = 0.992
3'(1.000;1.000;0.978;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, nucl 4.5, cyto_nucl 4, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162468)
HIX0162272
HIT000513179 (
ENST00000415245
)
(Hypothetical protein.)
genome : 23,570,525 - 23,574,735 (4,211)
query : 1 - 892 (892/892)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 8.5, cyto_nucl 8.5, cyto_pero 7.66667, extr 7,
nucl 6, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162272)
HIX0162525
HIT000524461 (
ENST00000426527
)
(Hypothetical short protein.)
genome : 23,580,387 - 23,583,247 (2,861)
query : 1 - 533 (533/533)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 13, nucl 2.5, cyto_nucl 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162525)
HIX0162422
HIT000519497 (
ENST00000421563
)
(Hypothetical short protein.)
genome : 23,598,100 - 23,604,170 (6,071)
query : 1 - 541 (541/541)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 3.5, cyto_nucl 2.5, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162422)
HIX0162422
HIT000527985 (
ENST00000430051
)
(Conserved hypothetical protein.)
genome : 23,598,235 - 23,604,126 (5,892)
query : 1 - 572 (572/572)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 11.5, mito 7, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162422)
HIX0001863
HIT000013860
(
AK057246
)
Representative transcript
(Hypothetical short protein.)
genome : 23,604,256 - 23,606,310 (2,055)
query : 1 - 2,055 (2,055/2,055)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 14.5, cyto 9, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001863)
HIX0001864
HIT000590194 (
ENST00000486442
)
(Kelch-like protein 29; Kelch repeat and BTB domain-containing protein 9;)
genome : 23,608,088 - 23,931,476 (323,389)
query : 1 - 5,287 (5,287/5,287)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 6, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001864)
HIX0001864
HIT000657659 (
NM_052920
)
(Kelch-like protein 29; Kelch repeat and BTB domain-containing protein 9;)
genome : 23,608,298 - 23,931,483 (323,186)
query : 1 - 5,084 (5,084/5,084)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 6, mito 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001864)
HIX0030076
HIT000066125
(
AF075103
)
Representative transcript
(Hypothetical short protein.)
genome : 23,675,374 - 23,675,980 (607)
query : 1 - 607 (607/616)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, pero 3, cyto 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030076)
HIX0030231
HIT000089821
(
BC018945
)
Representative transcript
(Conserved hypothetical protein.)
genome : 23,724,797 - 23,727,929 (3,133)
query : 1 - 3,133 (3,133/3,210)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 14, mito 12, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030231)
HIX0162635
HIT000528922 (
ENST00000430988
)
(Conserved hypothetical protein.)
genome : 23,729,913 - 23,747,214 (17,302)
query : 1 - 584 (584/584)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162635)
HIX0001864
HIT000263424
(
BC069271
)
(Kelch-like protein 29.)
genome : 23,755,455 - 23,867,143 (111,689)
query : 1 - 2,444 (2,444/2,461)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 15.5, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001864)
HIX0001864
HIT000593049 (
ENST00000489446
)
(Kelch-like protein 29.)
genome : 23,755,455 - 23,867,143 (111,689)
query : 1 - 2,444 (2,444/2,456)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001864)
HIX0001864
HIT000029245
(
AL834515
)
(Kelch-like protein 29; Kelch repeat and BTB domain-containing protein 9;)
genome : 23,785,309 - 23,920,814 (135,506)
query : 1 - 3,294 (3,294/3,369)
9 exons
identity = 0.997
5'(1.000;1.000;0.994;1.000;1.000;1.000;1.000;
1.000;0.996)3'
coverage = 1.000
InterPro :
IPR000210 : BTB/POZ-like
IPR006652 : Kelch repeat type 1
IPR011333 : BTB/POZ fold
IPR011705 : BTB/Kelch-associated
IPR013069 : BTB/POZ
IPR015916 : Galactose oxidase, beta-propeller
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 14.5, cyto 11.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001864)
HIX0001865
HIT000007462
(
AK024188
)
Representative transcript
(Conserved hypothetical protein.)
genome : 23,859,224 - 23,860,955 (1,732)
query : 1 - 1,734 (1,734/1,734)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 10, nucl 9.5, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001865)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : XM_001142578
HIX0001864
HIT000007442
(
AK024168
)
(Kelch-like protein 29; Kelch repeat and BTB domain-containing protein 9;)
genome : 23,865,163 - 23,868,329 (3,167)
query : 1 - 2,706 (2,706/2,706)
2 exons
identity = 0.993
5'(0.994;0.993)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 17.5, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001864)
HIX0001864
HIT000037248
(
BC015667
)
(Kelch-like protein 29.)
genome : 23,865,262 - 23,920,801 (55,540)
query : 1 - 3,042 (3,042/3,088)
7 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR000210 : BTB/POZ-like
IPR006652 : Kelch repeat type 1
IPR011333 : BTB/POZ fold
IPR011705 : BTB/Kelch-associated
IPR013069 : BTB/POZ
IPR015916 : Galactose oxidase, beta-propeller
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10.3333, cyto 9.5, cyto_mito 9.5, nucl 9,
mito 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001864)
HIX0001864
HIT000113008 (
ENST00000288548
)
(Kelch-like protein 29.)
genome : 23,865,262 - 23,920,802 (55,541)
query : 1 - 3,043 (3,043/3,043)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10.3333, cyto 9.5, cyto_mito 9.5, nucl 9,
mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001864)
HIX0001864
HIT000088248
(
BC013982
)
Representative transcript
(Kelch-like protein 29; Kelch repeat and BTB domain-containing protein 9;)
genome : 23,865,292 - 23,931,476 (66,185)
query : 7 - 4,066 (4,060/4,084)
10 exons
identity = 0.996
5'(0.974;1.000;1.000;1.000;1.000;1.000;0.994;
1.000;0.993;0.999)3'
coverage = 0.999
InterPro :
IPR000210 : BTB/POZ-like
IPR006652 : Kelch repeat type 1
IPR011333 : BTB/POZ fold
IPR011705 : BTB/Kelch-associated
IPR013069 : BTB/POZ
IPR015916 : Galactose oxidase, beta-propeller
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto_nucl 8.33333, nucl 8, cyto 6.5,
cyto_pero 5.16667, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001864)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC065168
Gallus
sp. (Chicken) : CR388973
Oryzias
sp. (Medaka) : ENSORLT00000012582
Pongo
sp. (Orangutan) : ENSPPYT00000014648
Tetraodon
sp. (Tetraodon) : GSTENT00020258001
Takifugu
sp. (Fugu) : SINFRUT00000139468
Rattus
sp. (Rat) : XM_001071030
Equus
sp. (Horse) : XM_001503238
Pan
sp. (Chimpanzee) : XM_525706
Canis
sp. (Dog) : XM_540105
Bos
sp. (Cow) : XM_617297
Danio
sp. (Zebrafish) : XM_690818
HIX0001866
HIT000005536
(
AK022262
)
Representative transcript
(Conserved hypothetical protein.)
genome : 23,877,584 - 23,879,802 (2,219)
query : 1 - 2,219 (2,219/2,219)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001866)
HIX0024196
HIT000049963
(
AK130692
)
Representative transcript
(Conserved hypothetical protein.)
genome : 23,882,146 - 23,884,210 (2,065)
query : 1 - 2,066 (2,066/2,066)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto_nucl 9.66667, nucl 9.5, cyto 6.5,
cyto_pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024196)
HIX0001864
HIT000001636
(
AB067508
)
(Kelch-like protein 29.)
genome : 23,911,655 - 23,931,481 (19,827)
query : 1 - 6,385 (6,385/6,385)
8 exons
identity = 0.998
5'(0.998;1.000;1.000;0.995;0.994;1.000;1.000;
0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, mito 12, cyto_nucl 12, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001864)
HIX0001864
HIT000576067 (
ENST00000471654
)
(Kelch-like protein 29.)
genome : 23,911,655 - 23,931,481 (19,827)
query : 1 - 6,385 (6,385/6,385)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, mito 12, cyto_nucl 12, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001864)
HIX0001864
HIT000019455
(
AK094600
)
(Kelch-like protein 29.)
genome : 23,929,377 - 23,931,473 (2,097)
query : 1 - 2,097 (2,097/2,097)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
InterPro :
IPR015915 : Kelch-type beta propeller
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 2.5, cyto_nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001864)
HIX0001867
HIT000486214 (
NM_017552
)
(ATPase family AAA domain-containing protein 2B;)
genome : 23,971,534 - 24,149,936 (178,403)
query : 1 - 8,055 (8,055/8,066)
28 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 15, cyto 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001867)
HIX0001867
HIT000657515 (
NM_001242338
)
(ATPase family AAA domain-containing protein 2B;)
genome : 23,971,534 - 24,149,936 (178,403)
query : 1 - 8,040 (8,040/8,051)
28 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 15, cyto 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001867)
HIX0001867
HIT000104891 (
ENST00000238789
)
(ATPase family AAA domain-containing protein 2B;)
genome : 23,971,534 - 24,149,984 (178,451)
query : 1 - 8,103 (8,103/8,103)
28 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 15, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001867)
HIX0001867
HIT000000956
(
AB033066
)
(ATPase family AAA domain-containing protein 2B isoform 2.)
genome : 23,971,541 - 24,042,725 (71,185)
query : 1 - 5,579 (5,579/5,579)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001867)
HIX0001867
HIT000362302 (
ENST00000381024
)
(ATPase family AAA domain-containing protein 2B isoform 2.)
genome : 23,971,541 - 24,042,725 (71,185)
query : 1 - 5,579 (5,579/5,579)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001867)
HIX0001867
HIT000063422
(
AF038204
)
(Hypothetical short protein.)
genome : 23,972,612 - 23,974,268 (1,657)
query : 1 - 1,657 (1,657/1,684)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001867)
HIX0001867
HIT000503577
(
BC171846
)
Representative transcript
(ATPase family AAA domain-containing protein 2B isoform 2.)
genome : 23,974,551 - 24,149,931 (175,381)
query : 1 - 5,102 (5,102/5,102)
29 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR003593 : AAA+ ATPase domain
IPR003959 : ATPase, AAA-type, core
IPR003960 : ATPase, AAA-type, conserved site
GO :
0000166 : Molecular Function : nucleotide binding
0005524 : Molecular Function : ATP binding
0017111 : Molecular Function : nucleoside-triphosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 15.5, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001867)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : BC081936
Danio
sp. (Zebrafish) : ENSDART00000085416
Equus
sp. (Horse) : ENSECAT00000025305
Monodelphis
sp. (Opossum) : ENSMODT00000019461
Tetraodon
sp. (Tetraodon) : GSTENT00020256001
Takifugu
sp. (Fugu) : SINFRUT00000161351
Pan
sp. (Chimpanzee) : XM_001142731
Gallus
sp. (Chicken) : XM_419982
Canis
sp. (Dog) : XM_532888
Bos
sp. (Cow) : XM_591344
Macaca
sp. (Macaque) : XR_012019
HIX0001867
eHIT000014853 ( ESTsASS_2_954 )
(Non-protein coding transcript.)
genome : 23,974,614 - 24,080,372 (105,759)
query : 1 - 3,199 (3,199/3,199)
16 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001867)
ESTs used for assembly :
CN357459,BF085638,T64001,CV318991
DB147416,DA614704,AW183181,DB460182
CA394347,DB320149,DA768177,BX479082
HIX0001867
HIT000045591
(
AK125718
)
(ATPase family AAA domain-containing protein 2B isoform 2.)
genome : 23,974,673 - 24,055,472 (80,800)
query : 1 - 3,765 (3,765/3,765)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto_nucl 11.5, cyto 8, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001867)
HIX0001867
HIT000578864 (
ENST00000474583
)
(ATPase family AAA domain-containing protein 2B isoform 2.)
genome : 23,974,673 - 24,055,472 (80,800)
query : 1 - 3,765 (3,765/3,765)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto_nucl 11.5, cyto 8, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001867)
HIX0001867
HIT000590356 (
ENST00000486610
)
(ATPase family AAA domain-containing protein 2B;)
genome : 23,977,054 - 23,977,962 (909)
query : 1 - 570 (570/570)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18, mito 6, E.R. 3, cyto_mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001867)
HIX0001867
HIT000249589
(
AK131301
)
(ATPase family AAA domain-containing protein 2B;)
genome : 23,988,403 - 24,080,336 (91,934)
query : 1 - 1,713 (1,713/1,713)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001487 : Bromodomain
IPR003959 : ATPase, AAA-type, core
IPR003960 : ATPase, AAA-type, conserved site
IPR018359 : Bromodomain, conserved site
GO :
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 10.5, extr 10, cyto_nucl 9, cyto 6.5, plas 2,
mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001867)
HIX0022038
HIT000010544
(
AK027272
)
Representative transcript
(Conserved hypothetical protein.)
genome : 23,994,527 - 23,996,417 (1,891)
query : 2 - 1,893 (1,892/1,893)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, mito 5, extr 3, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022038)
HIX0001867
HIT000264600
(
BC071781
)
(ATPase family AAA domain-containing protein 2B;)
genome : 24,004,639 - 24,005,995 (1,357)
query : 1 - 1,358 (1,358/1,387)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
InterPro :
IPR001487 : Bromodomain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 14.8333, cyto_plas 12.8333,
nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001867)
HIX0001867
HIT000006979
(
AK023705
)
(ATPase family AAA domain-containing protein 2B;)
genome : 24,007,586 - 24,011,233 (3,648)
query : 1 - 1,670 (1,670/1,674)
2 exons
identity = 0.999
3'(0.999;0.994)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, mito_nucl 14.8333, nucl 5.5,
cyto_nucl 4.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001867)
HIX0001867
HIT000582972 (
ENST00000478885
)
(ATPase family AAA domain-containing protein 2B;)
genome : 24,008,625 - 24,011,233 (2,609)
query : 1 - 631 (631/631)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14.5, mito_nucl 13.3333, nucl 11,
cyto_nucl 7.33333, E.R._mito 7.33333, mito_pero 7.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001867)
HIX0001867
HIT000601250 (
ENST00000498006
)
(ATPase family AAA domain-containing protein 2B;)
genome : 24,029,044 - 24,034,340 (5,297)
query : 1 - 521 (521/521)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.5, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001867)
HIX0001867
HIT000556444 (
ENST00000458510
)
(ATPase family AAA domain-containing protein 2B;)
genome : 24,046,381 - 24,055,481 (9,101)
query : 1 - 554 (554/554)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001867)
HIX0001867
HIT000019676
(
AK094821
)
(ATPase family AAA domain-containing protein 2B;)
genome : 24,056,794 - 24,149,984 (93,191)
query : 1 - 2,067 (2,067/2,067)
14 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003593 : AAA+ ATPase domain
IPR003959 : ATPase, AAA-type, core
IPR003960 : ATPase, AAA-type, conserved site
GO :
0000166 : Molecular Function : nucleotide binding
0005524 : Molecular Function : ATP binding
0017111 : Molecular Function : nucleoside-triphosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 15, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001867)
HIX0001867
HIT000347718 (
ENST00000366438
)
(ATPase family AAA domain-containing protein 2B;)
genome : 24,078,879 - 24,090,757 (11,879)
query : 1 - 867 (867/867)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 13, extr 3, mito 3, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001867)
HIX0001867
HIT000094843
(
BC037408
)
(ATPase family AAA domain-containing protein 2B;)
genome : 24,092,541 - 24,149,935 (57,395)
query : 12 - 1,416 (1,405/1,430)
10 exons
identity = 0.999
3'(1.000;1.000)5'
coverage = 0.992
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 15.5, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001867)
HIX0001867
HIT000537849 (
ENST00000439915
)
(ATPase family AAA domain-containing protein 2B;)
genome : 24,092,540 - 24,149,935 (57,396)
query : 1 - 1,406 (1,406/1,406)
10 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 15.5, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001867)
HIX0161796
HIT000523618 (
ENST00000425684
)
(Histidine phosphatase superfamily, clade-1 protein.)
genome : 24,095,138 - 24,095,884 (747)
query : 1 - 747 (747/747)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 10, mito 6, cyto_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161796)
HIX0001867
eHIT000014853 ( ESTsASS_2_954 )
(Non-protein coding transcript.)
genome : 23,974,614 - 24,080,372 (105,759)
query : 1 - 3,199 (3,199/3,199)
16 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0001867)
ESTs used for assembly :
CN357459,BF085638,T64001,CV318991
DB147416,DA614704,AW183181,DB460182
CA394347,DB320149,DA768177,BX479082
AC116176.4
22500001-22532193 F +
NCBI
AC099799.6
22532194-22558139 F +
NCBI
AC096570.1
22558140-22764111 F +
NCBI
AC096561.1
22764112-22932415 F +
NCBI
AC074233.6
22932416-22989041 F +
NCBI
AC110300.3
22989042-23080836 F +
NCBI
AC127378.3
23080837-23082830 F +
NCBI
AC104807.5
23082831-23145062 F +
NCBI
AC016768.10
23145063-23327513 F +
NCBI
AC018467.9
23327514-23483124 F +
NCBI
AC110925.1
23483125-23485118 F -
NCBI
AC012506.9
23485119-23680421 F +
NCBI
AC011239.5
23680422-23870296 F +
NCBI
AC009242.6
23870297-24028492 F -
NCBI
AC079924.6
24028493-24056812 F +
NCBI
AC066692.3
24056813-24100000 F +
NCBI