bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0214623
pHIT000073057 ( pHIT000073057 )
(Conserved hypothetical protein.)
genome : 206,951,066 - 207,024,705 (73,640)
query : 1 - 1,959 (1,959/1,959)
15 exons
InterPro :
IPR000283 : NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site
IPR006656 : Molybdopterin oxidoreductase
IPR006963 : Molybdopterin oxidoreductase, 4Fe-4S domain
IPR010228 : NADH:ubiquinone oxidoreductase, subunit G
IPR019574 : NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding
GO :
0008137 : Molecular Function : NADH dehydrogenase (ubiquinone) activity
0016020 : Cellular Component : membrane
0016491 : Molecular Function : oxidoreductase activity
0016651 : Molecular Function : oxidoreductase activity, acting on NAD(P)H
0042773 : Biological Process : ATP synthesis coupled electron transport
0051536 : Molecular Function : iron-sulfur cluster binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214623)
CAGE tag :
H21BA13I1611
HIX0214623
HIT000035633
(
BC012068
)
Representative transcript
(Molybdopterin oxidoreductase domain containing protein.)
genome : 206,988,633 - 207,003,289 (14,657)
query : 1 - 1,149 (1,149/1,200)
7 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR006656 : Molybdopterin oxidoreductase
IPR015405 : NADH-quinone oxidoreductase, chain G, C-terminal
GO :
0016491 : Molecular Function : oxidoreductase activity
0016651 : Molecular Function : oxidoreductase activity, acting on NAD(P)H
0051536 : Molecular Function : iron-sulfur cluster binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 18.1667, cyto_pero 13.3333,
mito 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214623)
HIX0214623
HIT000387226
(
BC113969
)
(NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding domain containing protein.)
genome : 207,007,494 - 207,012,555 (5,062)
query : 14 - 722 (709/727)
6 exons
identity = 0.997
3'(0.984;0.991;1.000;1.000;1.000;1.000)5'
coverage = 0.975
InterPro :
IPR000283 : NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site
IPR006656 : Molybdopterin oxidoreductase
IPR006963 : Molybdopterin oxidoreductase, 4Fe-4S domain
IPR019574 : NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding
GO :
0008137 : Molecular Function : NADH dehydrogenase (ubiquinone) activity
0016020 : Cellular Component : membrane
0016491 : Molecular Function : oxidoreductase activity
0042773 : Biological Process : ATP synthesis coupled electron transport
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 10, cysk 9, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214623)
HIX0214623
HIT000554218 (
ENST00000456284
)
(Beta-grasp domain containing protein.)
genome : 207,012,476 - 207,024,149 (11,674)
query : 1 - 548 (548/563)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.973
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214623)
HIX0214623
HIT000552129 (
ENST00000454195
)
(NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding domain containing protein.)
genome : 207,012,506 - 207,023,981 (11,476)
query : 1 - 569 (569/569)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26.5, cyto_mito 15, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214623)
HIX0030263
HIT000092797
(
BC032767
)
Representative transcript
(Conserved hypothetical protein.)
genome : 207,017,446 - 207,018,309 (864)
query : 12 - 876 (865/896)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 0.987
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11, nucl 8.5, extr 6, mito 2,
golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030263)
HIX0002770
HIT000104725 (
ENST00000236957
)
(Elongation factor 1-beta; EF-1-beta;)
genome : 207,024,309 - 207,027,652 (3,344)
query : 1 - 844 (844/844)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 13.5, cyto 12.5, plas 2, extr 2,
extr_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002770)
HIX0002770
HIT000198888 (
NM_001959
)
(Elongation factor 1-beta; EF-1-beta;)
genome : 207,024,318 - 207,027,653 (3,336)
query : 1 - 1,110 (1,110/1,128)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 13.5, cyto 12.5, plas 2, extr 2,
extr_plas 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002770)
HIX0002770
HIT000208241 (
NM_021121
)
(Elongation factor 1-beta; EF-1-beta;)
genome : 207,024,318 - 207,027,653 (3,336)
query : 1 - 836 (836/854)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 13.5, cyto 12.5, plas 2, extr 2,
extr_plas 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002770)
HIX0002770
HIT000366340 (
NM_001037663
)
(Elongation factor 1-beta; EF-1-beta;)
genome : 207,024,318 - 207,027,653 (3,336)
query : 1 - 882 (882/900)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 13.5, cyto 12.5, plas 2, extr 2,
extr_plas 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002770)
HIX0002770
HIT000475713 (
ENST00000392221
)
(Elongation factor 1-beta; EF-1-beta;)
genome : 207,024,318 - 207,027,651 (3,334)
query : 1 - 880 (880/880)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 13.5, cyto 12.5, plas 2, extr 2,
extr_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002770)
HIX0002770
HIT000475714 (
ENST00000392222
)
(Elongation factor 1-beta; EF-1-beta;)
genome : 207,024,329 - 207,027,652 (3,324)
query : 1 - 1,098 (1,098/1,098)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 13.5, cyto 12.5, plas 2, extr 2,
extr_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002770)
HIX0002770
HIT000543439 (
ENST00000445505
)
(Elongation factor 1-beta; EF-1-beta;)
genome : 207,024,331 - 207,026,801 (2,471)
query : 1 - 515 (515/515)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 11.5, extr 9, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002770)
HIX0002770
HIT000322412
(
X60656
)
Representative transcript
(Elongation factor 1-beta; EF-1-beta;)
genome : 207,024,334 - 207,027,652 (3,319)
query : 1 - 818 (818/818)
7 exons
identity = 0.999
5'(0.987;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001326 : Translation elongation factor EF1B, beta/delta chains, conserved site
IPR010987 : Glutathione S-transferase, C-terminal-like
IPR014038 : Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange
IPR014717 : Translation elongation factor EF1B/ribosomal protein S6
IPR018940 : Elongation factor 1 beta central acidic region, eukaryote
GO :
0003746 : Molecular Function : translation elongation factor activity
0005853 : Cellular Component : eukaryotic translation elongation factor 1 complex
0006414 : Biological Process : translational elongation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 13.5, cyto 12.5, plas 2, extr 2,
extr_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002770)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB171095
Mus
sp. (Mouse) : AK012756
Danio
sp. (Zebrafish) : AY398339
Bos
sp. (Cow) : BT021037
Gallus
sp. (Chicken) : BX933428
Tetraodon
sp. (Tetraodon) : CR688433
Oryzias
sp. (Medaka) : ENSORLT00000015599
Pongo
sp. (Orangutan) : ENSPPYT00000015240
Takifugu
sp. (Fugu) : SINFRUT00000170621
Rattus
sp. (Rat) : XM_001071102
Pan
sp. (Chimpanzee) : XM_001135927
Monodelphis
sp. (Opossum) : XM_001365825
Equus
sp. (Horse) : XM_001498308
Canis
sp. (Dog) : XM_854704
HIX0002770
HIT000583643 (
ENST00000479587
)
(Elongation factor 1-beta; EF-1-beta;)
genome : 207,024,339 - 207,025,841 (1,503)
query : 1 - 701 (701/701)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 11.5, extr 8, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002770)
HIX0002770
HIT000029434
(
BC000211
)
(Elongation factor 1-beta; EF-1-beta;)
genome : 207,024,352 - 207,027,652 (3,301)
query : 1 - 801 (801/825)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001326 : Translation elongation factor EF1B, beta/delta chains, conserved site
IPR010987 : Glutathione S-transferase, C-terminal-like
IPR014038 : Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange
IPR014717 : Translation elongation factor EF1B/ribosomal protein S6
IPR018940 : Elongation factor 1 beta central acidic region, eukaryote
GO :
0003746 : Molecular Function : translation elongation factor activity
0005853 : Cellular Component : eukaryotic translation elongation factor 1 complex
0006414 : Biological Process : translational elongation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 13.5, cyto 12.5, plas 2, extr 2,
extr_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002770)
HIX0002770
HIT000527703 (
ENST00000429769
)
(Elongation factor 1-beta; EF-1-beta;)
genome : 207,024,360 - 207,027,525 (3,166)
query : 1 - 912 (912/912)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, nucl 11.5, cyto 10.5, extr 5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002770)
HIX0002770
HIT000565676 (
ENST00000460760
)
(Elongation factor 1-beta; EF-1-beta;)
genome : 207,024,362 - 207,025,914 (1,553)
query : 1 - 1,025 (1,025/1,025)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 11.5, extr 8, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002770)
HIX0002770
HIT000322403
(
X60489
)
(Elongation factor 1-beta; EF-1-beta;)
genome : 207,024,469 - 207,027,652 (3,184)
query : 1 - 958 (958/964)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.994
InterPro :
IPR001326 : Translation elongation factor EF1B, beta/delta chains, conserved site
IPR010987 : Glutathione S-transferase, C-terminal-like
IPR014038 : Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange
IPR014717 : Translation elongation factor EF1B/ribosomal protein S6
IPR018940 : Elongation factor 1 beta central acidic region, eukaryote
GO :
0003746 : Molecular Function : translation elongation factor activity
0005853 : Cellular Component : eukaryotic translation elongation factor 1 complex
0006414 : Biological Process : translational elongation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 13.5, cyto 12.5, plas 2, extr 2,
extr_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002770)
HIX0002770
HIT000262755
(
BC067787
)
(Elongation factor 1-beta; EF-1-beta;)
genome : 207,024,621 - 207,027,652 (3,032)
query : 3 - 808 (806/852)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.995)3'
coverage = 0.998
InterPro :
IPR001326 : Translation elongation factor EF1B, beta/delta chains, conserved site
IPR010987 : Glutathione S-transferase, C-terminal-like
IPR014038 : Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange
IPR014717 : Translation elongation factor EF1B/ribosomal protein S6
IPR018940 : Elongation factor 1 beta central acidic region, eukaryote
GO :
0003746 : Molecular Function : translation elongation factor activity
0005853 : Cellular Component : eukaryotic translation elongation factor 1 complex
0006414 : Biological Process : translational elongation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 13.5, cyto 12.5, plas 2, extr 2,
extr_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002770)
HIX0002770
HIT000424707
(
AK291910
)
(Elongation factor 1-beta; EF-1-beta;)
genome : 207,024,620 - 207,027,651 (3,032)
query : 1 - 806 (806/806)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001326 : Translation elongation factor EF1B, beta/delta chains, conserved site
IPR010987 : Glutathione S-transferase, C-terminal-like
IPR014038 : Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange
IPR014717 : Translation elongation factor EF1B/ribosomal protein S6
IPR018940 : Elongation factor 1 beta central acidic region, eukaryote
GO :
0003746 : Molecular Function : translation elongation factor activity
0005853 : Cellular Component : eukaryotic translation elongation factor 1 complex
0006414 : Biological Process : translational elongation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 13.5, cyto 12.5, plas 2, extr 2,
extr_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002770)
HIX0002770
HIT000428962
(
AK310096
)
(Elongation factor 1-beta; EF-1-beta;)
genome : 207,024,620 - 207,026,257 (1,638)
query : 1 - 934 (934/934)
3 exons
identity = 0.999
5'(1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR010987 : Glutathione S-transferase, C-terminal-like
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 11.5, extr 8, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002770)
HIX0002770
HIT000101179
(
D28350
)
(Non-protein coding transcript.)
genome : 207,024,620 - 207,024,709 (90)
query : 1 - 90 (90/90)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002770)
HIX0002770
HIT000091739
(
BC029316
)
(Elongation factor 1-beta; EF-1-beta;)
genome : 207,024,642 - 207,027,652 (3,011)
query : 1 - 785 (785/802)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001326 : Translation elongation factor EF1B, beta/delta chains, conserved site
IPR010987 : Glutathione S-transferase, C-terminal-like
IPR014038 : Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange
IPR014717 : Translation elongation factor EF1B/ribosomal protein S6
IPR018940 : Elongation factor 1 beta central acidic region, eukaryote
GO :
0003746 : Molecular Function : translation elongation factor activity
0005853 : Cellular Component : eukaryotic translation elongation factor 1 complex
0006414 : Biological Process : translational elongation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 13.5, cyto 12.5, plas 2, extr 2,
extr_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002770)
HIX0002770
HIT000513838 (
ENST00000415904
)
(Elongation factor 1-beta; EF-1-beta;)
genome : 207,024,651 - 207,026,191 (1,541)
query : 1 - 649 (649/649)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 11.5, extr 8, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002770)
HIX0002770
HIT000032094
(
BC004931
)
(Elongation factor 1-beta; EF-1-beta;)
genome : 207,024,657 - 207,027,652 (2,996)
query : 1 - 770 (770/817)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.942
InterPro :
IPR001326 : Translation elongation factor EF1B, beta/delta chains, conserved site
IPR010987 : Glutathione S-transferase, C-terminal-like
IPR014038 : Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange
IPR014717 : Translation elongation factor EF1B/ribosomal protein S6
IPR018940 : Elongation factor 1 beta central acidic region, eukaryote
GO :
0003746 : Molecular Function : translation elongation factor activity
0005853 : Cellular Component : eukaryotic translation elongation factor 1 complex
0006414 : Biological Process : translational elongation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 13.5, cyto 12.5, plas 2, extr 2,
extr_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002770)
HIX0002770
HIT000553084 (
ENST00000455150
)
(Elongation factor 1-delta; EF-1-delta; Antigen NY-CO-4;)
genome : 207,024,658 - 207,027,563 (2,906)
query : 1 - 670 (670/670)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15.5, mito_nucl 10.3333, extr 8, nucl 4,
cyto_nucl 3.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002770)
HIX0002770
HIT000533057 (
ENST00000435123
)
(Elongation factor 1-beta; EF-1-beta;)
genome : 207,024,658 - 207,026,178 (1,521)
query : 1 - 389 (389/389)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002770)
HIX0002770
HIT000099999
(
BT007079
)
(Elongation factor 1-beta; EF-1-beta;)
genome : 207,024,704 - 207,027,606 (2,903)
query : 1 - 677 (677/678)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR001326 : Translation elongation factor EF1B, beta/delta chains, conserved site
IPR010987 : Glutathione S-transferase, C-terminal-like
IPR014038 : Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange
IPR014717 : Translation elongation factor EF1B/ribosomal protein S6
IPR018940 : Elongation factor 1 beta central acidic region, eukaryote
GO :
0003746 : Molecular Function : translation elongation factor activity
0005853 : Cellular Component : eukaryotic translation elongation factor 1 complex
0006414 : Biological Process : translational elongation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 13.5, cyto 12.5, plas 2, extr 2,
extr_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002770)
HIX0002770
HIT000267675
(
CR456825
)
(Elongation factor 1-beta; EF-1-beta;)
genome : 207,024,704 - 207,027,607 (2,904)
query : 1 - 678 (678/678)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.994)3'
coverage = 1.000
InterPro :
IPR001326 : Translation elongation factor EF1B, beta/delta chains, conserved site
IPR010987 : Glutathione S-transferase, C-terminal-like
IPR014038 : Translation elongation factor EF1B, beta/delta subunit, guanine nucleotide exchange
IPR014717 : Translation elongation factor EF1B/ribosomal protein S6
IPR018940 : Elongation factor 1 beta central acidic region, eukaryote
GO :
0003746 : Molecular Function : translation elongation factor activity
0005853 : Cellular Component : eukaryotic translation elongation factor 1 complex
0006414 : Biological Process : translational elongation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 13.5, cyto 12.5, plas 2, extr 2,
extr_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002770)
HIX0002770
HIT000618975_01 (
ENST00000519625
)
(Elongation factor 1-beta; EF-1-beta;)
genome : 207,024,704 - 207,027,607 (2,904)
query : 1 - 676 (676/676)
6 exons
identity = 0.956
5'(0.938;0.935;0.961;0.955;0.960;0.974)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 11.5, extr 7, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002770)
HIX0002770
HIT000680237_01 (
ENST00000567221
)
(Elongation factor 1-beta; EF-1-beta;)
genome : 207,024,706 - 207,027,606 (2,901)
query : 1 - 672 (672/672)
6 exons
identity = 0.957
5'(0.923;0.951;0.961;1.000;0.937;0.974)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 13.5, nucl 11.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002770)
HIX0077690
HIT000470325 (
ENST00000384320
)
(Non-protein coding transcript.)
genome : 207,026,602 - 207,026,681 (80)
query : 1 - 80 (80/80)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0077690)
HIX0077690
HIT000367042 (
NR_002589
)
(Non-protein coding transcript.)
genome : 207,026,605 - 207,026,674 (70)
query : 1 - 70 (70/70)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0077690)
HIX0077690
HIT000383098
(
X96650
)
Representative transcript
(Non-protein coding transcript.)
genome : 207,026,605 - 207,026,674 (70)
query : 1 - 70 (70/70)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0077690)
HIX0077690
HIT000438031
(
DQ571500
)
(Non-protein coding transcript.)
genome : 207,026,645 - 207,026,674 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0077690)
HIX0002770
HIT000586054 (
ENST00000482103
)
(Elongation factor 1-beta; EF-1-beta;)
genome : 207,026,952 - 207,027,652 (701)
query : 1 - 587 (587/587)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18, cyto 10, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002770)
HIX0002770
HIT000367043 (
NR_002590
)
(Hypothetical short protein.)
genome : 207,026,952 - 207,027,083 (132)
query : 1 - 132 (132/132)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 14.5, cyto_nucl 8, extr_plas 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002770)
HIX0002770
HIT000383010
(
AJ609464
)
(Hypothetical short protein.)
genome : 207,026,952 - 207,027,083 (132)
query : 1 - 132 (132/132)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 14.5, cyto_nucl 8, extr_plas 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002770)
HIX0002770
HIT000470666 (
ENST00000384675
)
(Hypothetical short protein.)
genome : 207,026,952 - 207,027,083 (132)
query : 1 - 132 (132/132)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 14.5, cyto_nucl 8, extr_plas 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002770)
HIX0029868
HIT000082165
(
AK075130
)
(G protein-coupled receptor 1 orphan family protein.)
genome : 207,039,828 - 207,078,095 (38,268)
query : 1 - 2,237 (2,237/2,237)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
InterPro :
IPR002275 : G protein-coupled receptor 1 orphan
GO :
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029868)
HIX0029868
HIT000201984 (
NM_005279
)
(G protein-coupled receptor 1 orphan family protein.)
genome : 207,040,043 - 207,082,771 (42,729)
query : 1 - 2,315 (2,315/2,330)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029868)
HIX0029868
HIT000485161 (
NM_001098199
)
(G protein-coupled receptor 1 orphan family protein.)
genome : 207,040,043 - 207,082,771 (42,729)
query : 1 - 2,311 (2,311/2,326)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029868)
HIX0029868
HIT000724405 (
NM_001261452
)
(G protein-coupled receptor 1 orphan family protein.)
genome : 207,040,043 - 207,082,771 (42,729)
query : 1 - 2,562 (2,562/2,577)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029868)
HIX0029868
HIT000724406 (
NM_001261453
)
(G protein-coupled receptor 1 orphan family protein.)
genome : 207,040,043 - 207,082,771 (42,729)
query : 1 - 2,566 (2,566/2,581)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029868)
HIX0029868
HIT000262801
(
BC067833
)
(G-protein coupled receptor 1;)
genome : 207,040,043 - 207,082,635 (42,593)
query : 2 - 2,180 (2,179/2,195)
3 exons
identity = 0.999
3'(0.998;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002275 : G protein-coupled receptor 1 orphan
GO :
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029868)
HIX0029868
HIT000724407 (
NM_001261454
)
(G protein-coupled receptor 1 orphan family protein.)
genome : 207,040,043 - 207,078,352 (38,310)
query : 1 - 2,157 (2,157/2,172)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029868)
HIX0029868
HIT000724408 (
NM_001261455
)
(G protein-coupled receptor 1 orphan family protein.)
genome : 207,040,043 - 207,078,352 (38,310)
query : 1 - 2,153 (2,153/2,168)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029868)
HIX0029868
HIT000505929 (
ENST00000407325
)
(G protein-coupled receptor 1 orphan family protein.)
genome : 207,040,040 - 207,082,748 (42,709)
query : 1 - 2,295 (2,295/2,295)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029868)
HIX0029868
HIT000259795
(
BC058005
)
(G protein-coupled receptor 1 orphan family protein.)
genome : 207,040,520 - 207,078,095 (37,576)
query : 5 - 1,551 (1,547/1,610)
2 exons
identity = 0.992
3'(0.991;1.000)5'
coverage = 0.997
InterPro :
IPR002275 : G protein-coupled receptor 1 orphan
GO :
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029868)
HIX0029868
HIT000398667
(
U13666
)
(G protein-coupled receptor 1 orphan family protein.)
genome : 207,040,760 - 207,042,195 (1,436)
query : 2 - 1,438 (1,437/1,438)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 0.999
InterPro :
IPR002275 : G protein-coupled receptor 1 orphan
GO :
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029868)
HIX0029868
HIT000423773
(
AK290976
)
(G-protein coupled receptor 1;)
genome : 207,040,827 - 207,082,685 (41,859)
query : 1 - 1,445 (1,445/1,445)
3 exons
identity = 0.999
3'(0.999;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002275 : G protein-coupled receptor 1 orphan
GO :
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029868)
HIX0029868
HIT000431783
(
AK312917
)
(G-protein coupled receptor 1.)
genome : 207,040,904 - 207,082,627 (41,724)
query : 1 - 1,556 (1,556/1,556)
4 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002275 : G protein-coupled receptor 1 orphan
GO :
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029868)
HIX0029868
HIT000535354 (
ENST00000437420
)
(G protein-coupled receptor 1 orphan family protein.)
genome : 207,040,904 - 207,082,627 (41,724)
query : 1 - 1,557 (1,557/1,557)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029868)
HIX0029868
HIT000469151
(
EF577403
)
Representative transcript
(G protein-coupled receptor 1 orphan family protein.)
genome : 207,040,904 - 207,041,971 (1,068)
query : 1 - 1,068 (1,068/1,068)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR002275 : G protein-coupled receptor 1 orphan
GO :
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029868)
HIX0029868
HIT000540068 (
ENST00000442134
)
(G protein-coupled receptor 1 orphan family protein.)
genome : 207,041,290 - 207,078,095 (36,806)
query : 1 - 830 (830/830)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029868)
HIX0029868
HIT000549724 (
ENST00000451790
)
(G protein-coupled receptor 1 orphan family protein.)
genome : 207,041,437 - 207,078,349 (36,913)
query : 1 - 756 (756/756)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029868)
HIX0029868
HIT000545779 (
ENST00000447845
)
(G protein-coupled receptor 1 orphan family protein.)
genome : 207,041,560 - 207,078,162 (36,603)
query : 1 - 572 (572/572)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029868)
HIX0029868
HIT000537866 (
ENST00000439932
)
(G protein-coupled receptor 1 orphan family protein.)
genome : 207,041,724 - 207,078,468 (36,745)
query : 1 - 592 (592/592)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 21, cyto 5.5, cyto_mito 3.5, nucl 2, E.R. 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029868)
HIX0029868
HIT000509653 (
ENST00000411719
)
(G protein-coupled receptor 1 orphan family protein.)
genome : 207,041,751 - 207,082,771 (41,021)
query : 1 - 603 (603/603)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 17.5, extr_plas 9.5, cyto 5.5, cyto_mito 4,
nucl 3, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029868)
HIX0029868
HIT000556374 (
ENST00000458440
)
(Hypothetical short protein.)
genome : 207,041,915 - 207,082,624 (40,710)
query : 1 - 547 (547/547)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029868)
HIX0163002
HIT000543809 (
ENST00000445875
)
(ATPase, OSCP/delta subunit family protein.)
genome : 207,100,960 - 207,101,595 (636)
query : 1 - 636 (636/636)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, cyto 15, nucl 12, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0163002)
HIX0002771
HIT000018182
(
AK093315
)
(Conserved hypothetical protein.)
genome : 207,117,171 - 207,129,280 (12,110)
query : 1 - 1,899 (1,899/1,899)
2 exons
identity = 0.997
5'(0.997;0.998)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002771)
HIX0162827
HIT000536442 (
ENST00000438508
)
(Conserved hypothetical protein.)
genome : 207,124,352 - 207,124,642 (291)
query : 1 - 291 (291/291)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 9, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162827)
HIX0002771
HIT000004479
(
AK002005
)
Representative transcript
(Conserved hypothetical protein.)
genome : 207,128,788 - 207,130,967 (2,180)
query : 1 - 2,180 (2,180/2,180)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, cyto 12.5, nucl 10.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002771)
HIX0002771
HIT000091566
(
BC028329
)
(Conserved hypothetical protein.)
genome : 207,128,915 - 207,130,050 (1,136)
query : 1 - 1,136 (1,136/1,152)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002771)
HIX0002772
HIT000660565
(
AB775781
)
(DBF4-type zinc finger-containing protein 2;)
genome : 207,139,365 - 207,179,148 (39,784)
query : 1 - 10,304 (10,304/10,304)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006572 : Zinc finger, DBF-type
GO :
0003676 : Molecular Function : nucleic acid binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002772)
HIX0002772
HIT000355703 (
ENST00000374423
)
(DBF4-type zinc finger-containing protein 2;)
genome : 207,139,387 - 207,179,148 (39,762)
query : 1 - 10,282 (10,282/10,282)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002772)
HIX0002772
HIT000047144
(
AK127271
)
Representative transcript
(DBF4-type zinc finger-containing protein 2 homolog;)
genome : 207,139,523 - 207,172,525 (33,003)
query : 4 - 3,526 (3,523/3,526)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR006572 : Zinc finger, DBF-type
GO :
0003676 : Molecular Function : nucleic acid binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002772)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK015271
Bos
sp. (Cow) : ENSBTAT00000002190
Pongo
sp. (Orangutan) : ENSPPYT00000015242
Macaca
sp. (Macaque) : XM_001097564
Monodelphis
sp. (Opossum) : XM_001370678
Equus
sp. (Horse) : XM_001498369
Pan
sp. (Chimpanzee) : XM_526003
Canis
sp. (Dog) : XM_545611
Rattus
sp. (Rat) : XM_576579
HIX0002772
HIT000486244 (
NM_020923
)
(DBF4-type zinc finger-containing protein 2;)
genome : 207,139,523 - 207,179,148 (39,626)
query : 1 - 10,146 (10,146/10,146)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002772)
HIX0002772
HIT000660564
(
AB775780
)
(DBF4-type zinc finger-containing protein 2.)
genome : 207,139,752 - 207,179,148 (39,397)
query : 1 - 10,198 (10,198/10,198)
7 exons
identity = 1.000
5'(1.000;1.000;0.978;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 13.5, mito 7, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002772)
HIX0002772
HIT000001286
(
AB046791
)
(DBF4-type zinc finger-containing protein 2 homolog;)
genome : 207,170,977 - 207,179,148 (8,172)
query : 1 - 8,172 (8,172/8,172)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002772)
HIX0002772
HIT000050164
(
AK130893
)
(DBF4-type zinc finger-containing protein 2.)
genome : 207,172,602 - 207,174,774 (2,173)
query : 1 - 2,173 (2,173/2,173)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 15.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002772)
HIX0002772
HIT000007613
(
AK024339
)
(Conserved hypothetical protein.)
genome : 207,177,009 - 207,179,148 (2,140)
query : 1 - 2,142 (2,142/2,142)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, mito 11, cyto 4.5, cyto_pero 4.33333,
cyto_nucl 4.16667, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002772)
HIX0057115
HIT000133597_02 (
ENST00000340967
)
(Ceramidase family protein.)
genome : 207,273,435 - 207,275,659 (2,225)
query : 1 - 2,238 (2,238/2,238)
1 exon
identity = 0.960
3'(0.960)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057115)
HIX0057115
HIT000517997_01 (
ENST00000420063
)
(Ceramidase family protein.)
genome : 207,274,811 - 207,275,633 (823)
query : 1 - 823 (823/823)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057115)
HIX0163110
HIT000548339 (
ENST00000450405
)
(RNA recognition motif domain containing protein.)
genome : 207,284,016 - 207,284,962 (947)
query : 1 - 947 (947/947)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0163110)
HIX0002773
HIT000109286 (
ENST00000264377
)
(Peptidase M12B, propeptide domain containing protein.)
genome : 207,308,263 - 207,485,851 (177,589)
query : 1 - 6,327 (6,327/6,327)
26 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, golg 6, E.R._golg 6, E.R. 4, plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002773)
HIX0002773
HIT000200607 (
NM_003812
)
(Peptidase M12B, propeptide domain containing protein.)
genome : 207,308,368 - 207,485,853 (177,486)
query : 1 - 6,224 (6,224/6,236)
26 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, golg 6, E.R._golg 6, E.R. 4, plas 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002773)
HIX0002773
HIT000058189
(
AB009672
)
(Disintegrin and metalloproteinase domain-containing protein 23; ADAM 23; Metalloproteinase-like, disintegrin-like, and cysteine-rich protein 3; MDC-3; Precursor;)
genome : 207,308,368 - 207,482,682 (174,315)
query : 1 - 3,054 (3,054/3,054)
26 exons
identity = 0.999
5'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR000742 : Epidermal growth factor-like domain
IPR001590 : Peptidase M12B, ADAM/reprolysin
IPR001762 : Blood coagulation inhibitor, Disintegrin
IPR002870 : Peptidase M12B, propeptide
IPR006586 : ADAM, cysteine-rich
IPR013032 : EGF-like, conserved site
IPR024079 : Metallopeptidase, catalytic domain
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0005515 : Molecular Function : protein binding
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, golg 6, E.R._golg 6, E.R. 4, plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002773)
HIX0002773
HIT000390816
(
BC132763
)
(Disintegrin and metalloproteinase domain-containing protein 23; ADAM 23; Metalloproteinase-like, disintegrin-like, and cysteine-rich protein 3; MDC-3; Precursor;)
genome : 207,308,388 - 207,482,393 (174,006)
query : 1 - 2,744 (2,744/2,744)
26 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000742 : Epidermal growth factor-like domain
IPR001590 : Peptidase M12B, ADAM/reprolysin
IPR001762 : Blood coagulation inhibitor, Disintegrin
IPR002870 : Peptidase M12B, propeptide
IPR006586 : ADAM, cysteine-rich
IPR013032 : EGF-like, conserved site
IPR024079 : Metallopeptidase, catalytic domain
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0005515 : Molecular Function : protein binding
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, golg 6, E.R._golg 6, E.R. 4, plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002773)
HIX0002773
HIT000390818
(
BC132765
)
(Disintegrin and metalloproteinase domain-containing protein 23; ADAM 23; Metalloproteinase-like, disintegrin-like, and cysteine-rich protein 3; MDC-3; Precursor;)
genome : 207,308,388 - 207,482,391 (174,004)
query : 1 - 2,742 (2,742/2,742)
26 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000742 : Epidermal growth factor-like domain
IPR001590 : Peptidase M12B, ADAM/reprolysin
IPR001762 : Blood coagulation inhibitor, Disintegrin
IPR002870 : Peptidase M12B, propeptide
IPR006586 : ADAM, cysteine-rich
IPR013032 : EGF-like, conserved site
IPR024079 : Metallopeptidase, catalytic domain
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0005515 : Molecular Function : protein binding
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, golg 6, E.R._golg 6, E.R. 4, plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002773)
HIX0002773
HIT000244039
(
AJ005580
)
Representative transcript
(Disintegrin and metalloproteinase domain-containing protein 23; ADAM 23; Metalloproteinase-like, disintegrin-like, and cysteine-rich protein 3; MDC-3; Precursor;)
genome : 207,308,539 - 207,482,879 (174,341)
query : 1 - 3,079 (3,079/3,079)
26 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000742 : Epidermal growth factor-like domain
IPR001590 : Peptidase M12B, ADAM/reprolysin
IPR001762 : Blood coagulation inhibitor, Disintegrin
IPR002870 : Peptidase M12B, propeptide
IPR006586 : ADAM, cysteine-rich
IPR013032 : EGF-like, conserved site
IPR024079 : Metallopeptidase, catalytic domain
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0005515 : Molecular Function : protein binding
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, golg 6, E.R._golg 6, E.R. 4, plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002773)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AB009673
Macaca
sp. (Macaque) : AY650341
Rattus
sp. (Rat) : BC100646
Bos
sp. (Cow) : BC123411
Gallus
sp. (Chicken) : CR389836
Tetraodon
sp. (Tetraodon) : CR717415
Oryzias
sp. (Medaka) : ENSORLT00000022046
Pongo
sp. (Orangutan) : ENSPPYT00000015243
Takifugu
sp. (Fugu) : SINFRUT00000131800
Monodelphis
sp. (Opossum) : XM_001370517
Equus
sp. (Horse) : XM_001918018
Danio
sp. (Zebrafish) : XM_001923227
Pan
sp. (Chimpanzee) : XM_516049
Danio
sp. (Zebrafish) : XM_688429
Canis
sp. (Dog) : XM_844759
HIX0002773
HIT000355696 (
ENST00000374416
)
(Peptidase M12B, propeptide domain containing protein.)
genome : 207,308,539 - 207,482,879 (174,341)
query : 1 - 2,988 (2,988/2,988)
25 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, extr 9, cyto_nucl 4.5, extr_plas 4.5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002773)
HIX0002773
HIT000491468
(
AK296844
)
(Disintegrin and metalloproteinase domain-containing protein 11; ADAM 11; MDC11.1; Metalloprotease-disintegrin MDC11a; Metalloproteinase-like, disintegrin-like, and cysteine-rich protein; MDC; Fragment;)
genome : 207,308,561 - 207,482,569 (174,009)
query : 1 - 2,485 (2,485/2,485)
25 exons
identity = 0.994
5'(0.986;0.995;1.000;1.000;1.000;1.000;0.986;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.968;0.904;1.000)3'
coverage = 1.000
InterPro :
IPR001590 : Peptidase M12B, ADAM/reprolysin
IPR001762 : Blood coagulation inhibitor, Disintegrin
IPR002870 : Peptidase M12B, propeptide
IPR006586 : ADAM, cysteine-rich
IPR024079 : Metallopeptidase, catalytic domain
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto_mito 13.5, cyto_nucl 8.16667, nucl 7.5,
cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002773)
HIX0002773
HIT000355695 (
ENST00000374415
)
(Peptidase M12B, propeptide domain containing protein.)
genome : 207,308,591 - 207,482,566 (173,976)
query : 1 - 2,714 (2,714/2,714)
26 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, golg 6, E.R._golg 6, E.R. 4, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002773)
HIX0002773
HIT000049177
(
AK129906
)
(Peptidase M12B, propeptide domain containing protein.)
genome : 207,406,816 - 207,482,677 (75,862)
query : 1 - 2,212 (2,212/2,212)
22 exons
identity = 1.000
5'(1.000;1.000;0.986;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR000742 : Epidermal growth factor-like domain
IPR001590 : Peptidase M12B, ADAM/reprolysin
IPR001762 : Blood coagulation inhibitor, Disintegrin
IPR002870 : Peptidase M12B, propeptide
IPR006586 : ADAM, cysteine-rich
IPR013032 : EGF-like, conserved site
IPR024079 : Metallopeptidase, catalytic domain
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0005515 : Molecular Function : protein binding
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 13, mito 7, cyto_plas 7, nucl 5, mito_pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002773)
HIX0002773
HIT000542215 (
ENST00000444281
)
(EGF-like domain, extracellular containing protein.)
genome : 207,459,559 - 207,482,579 (23,021)
query : 1 - 460 (460/460)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, extr 12, cyto_nucl 11.5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002773)
HIX0002774
HIT000019994
(
AK095139
)
Representative transcript
(Hypothetical protein.)
genome : 207,470,896 - 207,473,546 (2,651)
query : 1 - 2,654 (2,654/2,654)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002774)
HIX0002774
HIT000513209 (
ENST00000415275
)
(Hypothetical short protein.)
genome : 207,471,221 - 207,474,536 (3,316)
query : 1 - 440 (440/440)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 14, cyto 9, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002774)
HIX0002773
HIT000016667
(
AK091800
)
(Conserved hypothetical protein.)
genome : 207,479,360 - 207,482,677 (3,318)
query : 4 - 3,321 (3,318/3,321)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 15.5, cyto 11.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002773)
HIX0002773
HIT000064310
(
AF052115
)
(Hypothetical protein.)
genome : 207,484,178 - 207,485,853 (1,676)
query : 1 - 1,644 (1,644/1,666)
2 exons
identity = 0.996
5'(0.993;0.999)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, pero 6, plas 3, cyto_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002773)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : BC100646
Bos
sp. (Cow) : BC126736
HIX0162266
HIT000512963 (
ENST00000415029
)
(Conserved hypothetical protein.)
genome : 207,504,797 - 207,506,006 (1,210)
query : 1 - 566 (566/566)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162266)
HIX0119026
HIT000485666 (
NM_001102659
)
(Conserved hypothetical protein.)
genome : 207,507,142 - 207,514,173 (7,032)
query : 1 - 1,376 (1,376/1,376)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0119026)
HIX0119026
HIT000642535 (
ENST00000543490
)
(Conserved hypothetical protein.)
genome : 207,507,142 - 207,514,173 (7,032)
query : 1 - 1,376 (1,376/1,376)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0119026)
HIX0119026
HIT000551750 (
ENST00000453816
)
(Conserved hypothetical protein.)
genome : 207,508,145 - 207,513,571 (5,427)
query : 1 - 214 (214/214)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, mito 11, extr 3, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0119026)
HIX0119026
HIT000539157 (
ENST00000441223
)
(Conserved hypothetical protein.)
genome : 207,508,951 - 207,513,735 (4,785)
query : 1 - 773 (773/773)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0119026)
HIX0094188
HIT000392421
(
DQ516347
)
Representative transcript
(Dystrotelin;)
genome : 207,516,345 - 207,583,120 (66,776)
query : 1 - 2,051 (2,051/2,051)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000433 : Zinc finger, ZZ-type
IPR011992 : EF-hand domain pair
IPR015153 : EF-hand domain, type 1
IPR015154 : EF-hand domain, type 2
GO :
0005509 : Molecular Function : calcium ion binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, nucl 12, cyto 12, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0094188)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : DQ443726
Mus
sp. (Mouse) : DQ443727
Equus
sp. (Horse) : ENSECAT00000006905
Takifugu
sp. (Fugu) : SINFRUT00000180563
Rattus
sp. (Rat) : XM_001071578
Gallus
sp. (Chicken) : XM_426570
HIX0094188
HIT000485107 (
NM_001093730
)
(Dystrotelin;)
genome : 207,516,345 - 207,583,120 (66,776)
query : 1 - 2,051 (2,051/2,051)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, nucl 12, cyto 12, mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0094188)
HIX0094188
HIT000550269 (
ENST00000452335
)
(Dystrotelin;)
genome : 207,516,345 - 207,583,120 (66,776)
query : 1 - 2,051 (2,051/2,051)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, nucl 12, cyto 12, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0094188)
HIX0118949
HIT000524021 (
ENST00000426087
)
(Conserved hypothetical protein.)
genome : 207,551,241 - 207,552,086 (846)
query : 1 - 846 (846/846)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0118949)
HIX0094188
HIT000581868 (
ENST00000477734
)
(Dystrotelin;)
genome : 207,564,451 - 207,569,758 (5,308)
query : 3 - 430 (428/430)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 6.5, cyto_nucl 5.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0094188)
HIX0002775
HIT000496874
(
AK302250
)
(Putative malate dehydrogenase 1B; EC=1.1.1.-;)
genome : 207,598,942 - 207,630,031 (31,090)
query : 1 - 1,014 (1,014/1,014)
10 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.992;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.-
InterPro :
IPR010945 : Malate dehydrogenase, type 2
GO :
0006108 : Biological Process : malate metabolic process
0016615 : Molecular Function : malate dehydrogenase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 15.8333, cyto_plas 12, extr 4,
nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002775)
HIX0002775
HIT000355692 (
ENST00000374412
)
(Putative malate dehydrogenase 1B; EC=1.1.1.-;)
genome : 207,602,487 - 207,630,271 (27,785)
query : 1 - 2,553 (2,553/2,553)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 11, cysk 8, nucl 2.5, extr 2,
mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002775)
HIX0002775
HIT000366572 (
NM_001039845
)
(Putative malate dehydrogenase 1B; EC=1.1.1.-;)
genome : 207,602,487 - 207,630,050 (27,564)
query : 1 - 2,332 (2,332/2,332)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 11, cysk 8, nucl 2.5, extr 2,
mito 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002775)
HIX0002775
HIT000051128
(
BC033509
)
(Putative malate dehydrogenase 1B; EC=1.1.1.-;)
genome : 207,602,552 - 207,630,018 (27,467)
query : 1 - 1,874 (1,874/1,901)
10 exons
identity = 0.996
3'(0.994;1.000;0.991;1.000;1.000;1.000;0.993;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.-
InterPro :
IPR010945 : Malate dehydrogenase, type 2
IPR015955 : Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0006108 : Biological Process : malate metabolic process
0016615 : Molecular Function : malate dehydrogenase activity
0016616 : Molecular Function : oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 14.8333, cyto_plas 13.1667,
nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002775)
HIX0002775
HIT000530845 (
ENST00000432911
)
(Putative malate dehydrogenase 1B; EC=1.1.1.-;)
genome : 207,602,552 - 207,630,018 (27,467)
query : 1 - 1,874 (1,874/1,874)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 14.8333, cyto_plas 13.1667,
nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002775)
HIX0002775
HIT000547726 (
ENST00000449792
)
(Putative malate dehydrogenase 1B; EC=1.1.1.-;)
genome : 207,602,949 - 207,630,050 (27,102)
query : 1 - 1,757 (1,757/1,757)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto 12, nucl 3, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002775)
HIX0002775
HIT000425183
(
AK292386
)
(Putative malate dehydrogenase 1B; EC=1.1.1.-;)
genome : 207,602,981 - 207,630,010 (27,030)
query : 1 - 1,795 (1,795/1,795)
12 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.993;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.-
InterPro :
IPR010945 : Malate dehydrogenase, type 2
IPR015955 : Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal
IPR016040 : NAD(P)-binding domain
IPR022383 : Lactate/malate dehydrogenase, C-terminal
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0006108 : Biological Process : malate metabolic process
0016615 : Molecular Function : malate dehydrogenase activity
0016616 : Molecular Function : oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 11, cysk 8, nucl 2.5, extr 2,
pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002775)
HIX0002775
HIT000552710 (
ENST00000454776
)
(Putative malate dehydrogenase 1B; EC=1.1.1.-;)
genome : 207,602,981 - 207,630,010 (27,030)
query : 1 - 1,795 (1,795/1,795)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 11, cysk 8, nucl 2.5, extr 2,
pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002775)
HIX0002775
HIT000266190
(
BC088356
)
(Putative malate dehydrogenase 1B; EC=1.1.1.-;)
genome : 207,603,054 - 207,630,027 (26,974)
query : 1 - 1,742 (1,742/1,773)
12 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.993;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.-
InterPro :
IPR010945 : Malate dehydrogenase, type 2
IPR015955 : Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal
IPR016040 : NAD(P)-binding domain
IPR022383 : Lactate/malate dehydrogenase, C-terminal
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0006108 : Biological Process : malate metabolic process
0016615 : Molecular Function : malate dehydrogenase activity
0016616 : Molecular Function : oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 11, cysk 8, nucl 2.5, extr 2,
mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002775)
HIX0002775
HIT000427123
(
AK308257
)
(Putative malate dehydrogenase 1B; EC=1.1.1.-;)
genome : 207,603,053 - 207,630,052 (27,000)
query : 1 - 1,766 (1,766/1,766)
12 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.993;0.978;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.-
InterPro :
IPR010945 : Malate dehydrogenase, type 2
IPR015955 : Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal
IPR016040 : NAD(P)-binding domain
IPR022383 : Lactate/malate dehydrogenase, C-terminal
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0006108 : Biological Process : malate metabolic process
0016615 : Molecular Function : malate dehydrogenase activity
0016616 : Molecular Function : oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 11, cysk 8, nucl 2.5, extr 2,
pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002775)
HIX0002775
HIT000014676
(
AK058070
)
(Putative malate dehydrogenase 1B; EC=1.1.1.-;)
genome : 207,603,053 - 207,625,684 (22,632)
query : 1 - 1,619 (1,619/1,619)
11 exons
identity = 0.986
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.956;0.993;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.-
InterPro :
IPR010945 : Malate dehydrogenase, type 2
IPR015955 : Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal
IPR016040 : NAD(P)-binding domain
IPR022383 : Lactate/malate dehydrogenase, C-terminal
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0006108 : Biological Process : malate metabolic process
0016615 : Molecular Function : malate dehydrogenase activity
0016616 : Molecular Function : oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, cyto 8, E.R._mito 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002775)
HIX0002775
HIT000425175
(
AK292378
)
Representative transcript
(Putative malate dehydrogenase 1B; EC=1.1.1.-;)
genome : 207,603,055 - 207,630,271 (27,217)
query : 1 - 1,985 (1,985/1,985)
12 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.993;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.-
InterPro :
IPR010945 : Malate dehydrogenase, type 2
IPR015955 : Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal
IPR016040 : NAD(P)-binding domain
IPR022383 : Lactate/malate dehydrogenase, C-terminal
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0006108 : Biological Process : malate metabolic process
0016615 : Molecular Function : malate dehydrogenase activity
0016616 : Molecular Function : oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 11, cysk 8, nucl 2.5, extr 2,
mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002775)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC050786
Danio
sp. (Zebrafish) : BC124491
Bos
sp. (Cow) : BC133372
Pongo
sp. (Orangutan) : CR858744
Oryzias
sp. (Medaka) : ENSORLT00000006646
Takifugu
sp. (Fugu) : SINFRUT00000174068
Rattus
sp. (Rat) : XM_001071578
Macaca
sp. (Macaque) : XM_001106735
Pan
sp. (Chimpanzee) : XM_001138429
Monodelphis
sp. (Opossum) : XM_001370491
Equus
sp. (Horse) : XM_001498497
Gallus
sp. (Chicken) : XM_421952
Canis
sp. (Dog) : XM_536042
HIX0002775
HIT000534406 (
ENST00000436472
)
(Putative malate dehydrogenase 1B; EC=1.1.1.-;)
genome : 207,604,317 - 207,630,031 (25,715)
query : 1 - 911 (911/911)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 15.8333, cyto_plas 12, extr 4,
nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002775)
HIX0002775
HIT000428010
(
AK309144
)
(Putative malate dehydrogenase 1B; EC=1.1.1.-;)
genome : 207,604,346 - 207,630,050 (25,705)
query : 1 - 1,827 (1,827/1,827)
11 exons
identity = 0.999
3'(1.000;0.997;1.000;1.000;1.000;1.000;1.000;
1.000;0.993;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.-
InterPro :
IPR010945 : Malate dehydrogenase, type 2
IPR015955 : Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal
IPR016040 : NAD(P)-binding domain
IPR022383 : Lactate/malate dehydrogenase, C-terminal
GO :
0003824 : Molecular Function : catalytic activity
0005975 : Biological Process : carbohydrate metabolic process
0006108 : Biological Process : malate metabolic process
0016615 : Molecular Function : malate dehydrogenase activity
0016616 : Molecular Function : oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto 12, nucl 3, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002775)
HIX0002775
HIT000475706 (
ENST00000392214
)
(Putative malate dehydrogenase 1B; EC=1.1.1.-;)
genome : 207,606,024 - 207,630,271 (24,248)
query : 1 - 1,128 (1,128/1,128)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 14.8333, cyto_plas 13.1667,
nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002775)
HIX0002775
HIT000576388 (
ENST00000471988
)
(Putative malate dehydrogenase 1B; EC=1.1.1.-;)
genome : 207,621,343 - 207,630,025 (8,683)
query : 1 - 722 (722/722)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.1.1.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 16.3333, cyto_plas 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002775)
HIX0002776
HIT000104729 (
ENST00000236980
)
(FAST kinase domain-containing protein 2;)
genome : 207,630,081 - 207,657,233 (27,153)
query : 1 - 3,188 (3,188/3,188)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25.5, cyto_mito 15, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002776)
HIX0002776
HIT000516223 (
ENST00000418289
)
(FAST kinase domain-containing protein 2;)
genome : 207,630,089 - 207,631,789 (1,701)
query : 1 - 576 (576/576)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 29.5, mito_pero 15.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002776)
HIX0002776
HIT000205208 (
NM_014929
)
(FAST kinase domain-containing protein 2;)
genome : 207,630,112 - 207,660,913 (30,802)
query : 1 - 6,837 (6,837/6,837)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25.5, cyto_mito 15, cyto 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002776)
HIX0002776
HIT000560329 (
NM_001136193
)
(FAST kinase domain-containing protein 2;)
genome : 207,630,112 - 207,660,913 (30,802)
query : 1 - 6,930 (6,930/6,930)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25.5, cyto_mito 15, cyto 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002776)
HIX0002776
HIT000560330 (
NM_001136194
)
(FAST kinase domain-containing protein 2;)
genome : 207,630,112 - 207,660,913 (30,802)
query : 1 - 6,945 (6,945/6,945)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25.5, cyto_mito 15, cyto 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002776)
HIX0002776
HIT000504251 (
ENST00000402774
)
(FAST kinase domain-containing protein 2;)
genome : 207,630,156 - 207,656,613 (26,458)
query : 1 - 2,586 (2,586/2,586)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25.5, cyto_mito 15, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002776)
HIX0002776
HIT000004831
(
AK021557
)
(FAST kinase domain-containing protein 2;)
genome : 207,630,311 - 207,656,598 (26,288)
query : 1 - 2,415 (2,415/2,415)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.988;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25.5, cyto_mito 15, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002776)
HIX0002776
HIT000504364 (
ENST00000403094
)
(FAST kinase domain-containing protein 2;)
genome : 207,630,330 - 207,656,530 (26,201)
query : 1 - 2,344 (2,344/2,344)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25.5, cyto_mito 15, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002776)
HIX0002776
HIT000003990
(
AK001516
)
(FAST kinase domain-containing protein 2;)
genome : 207,630,332 - 207,657,232 (26,901)
query : 1 - 2,936 (2,936/2,936)
12 exons
identity = 0.999
5'(1.000;0.999;1.000;1.000;1.000;0.993;1.000;
1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25.5, cyto_mito 15, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002776)
HIX0002776
HIT000002345
(
AF223470
)
Representative transcript
(FAST kinase domain-containing protein 2;)
genome : 207,630,338 - 207,656,613 (26,276)
query : 1 - 2,404 (2,404/2,434)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.995)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25.5, cyto_mito 15, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002776)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK148224
Rattus
sp. (Rat) : BC088416
Bos
sp. (Cow) : BC149140
Pongo
sp. (Orangutan) : CR860242
Monodelphis
sp. (Opossum) : ENSMODT00000020321
Equus
sp. (Horse) : XM_001498513
Canis
sp. (Dog) : XM_536043
Danio
sp. (Zebrafish) : XM_687718
Macaca
sp. (Macaque) : XR_012077
Pan
sp. (Chimpanzee) : XR_023024
HIX0002776
HIT000028750
(
AL833877
)
(FAST kinase domain-containing protein 2;)
genome : 207,630,338 - 207,656,542 (26,205)
query : 1 - 2,240 (2,240/2,258)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR010622 : FAST kinase leucine-rich
IPR013579 : FAST kinase-like protein, subdomain 2
IPR013584 : RAP domain
GO :
0004672 : Molecular Function : protein kinase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25.5, cyto_mito 15, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002776)
HIX0002776
HIT000000688_03
(
AB023188
)
(FAST kinase domain-containing protein 2;)
genome : 207,631,362 - 207,656,670 (25,309)
query : 4 - 4,999 (4,996/4,999)
9 exons
identity = 1.000
5'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25.5, cyto_mito 15, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002776)
HIX0002776
HIT000591466 (
ENST00000487777
)
(FAST kinase domain-containing protein 2;)
genome : 207,631,362 - 207,656,670 (25,309)
query : 4 - 4,999 (4,996/4,999)
9 exons
identity = 1.000
5'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25.5, cyto_mito 15, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002776)
HIX0002776
HIT000030483
(
BC001544
)
(FAST kinase domain-containing protein 2;)
genome : 207,631,362 - 207,657,229 (25,868)
query : 3 - 2,893 (2,891/2,908)
11 exons
identity = 0.999
5'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.999)3'
coverage = 0.999
InterPro :
IPR010622 : FAST kinase leucine-rich
IPR013579 : FAST kinase-like protein, subdomain 2
IPR013584 : RAP domain
GO :
0004672 : Molecular Function : protein kinase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25.5, cyto_mito 15, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002776)
HIX0002776
HIT000003789
(
AK001315
)
(FAST kinase domain-containing protein 2;)
genome : 207,639,018 - 207,657,228 (18,211)
query : 5 - 1,516 (1,512/1,516)
6 exons
identity = 0.999
5'(0.990;1.000;1.000;1.000;1.000;0.999)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto 10.5, cyto_nucl 10.5, nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002776)
HIX0204295
HIT000659344 (
NR_036078
)
(Non-protein coding transcript.)
genome : 207,647,958 - 207,648,032 (75)
query : 1 - 75 (75/75)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0204295)
HIX0204295
HIT000691153 (
ENST00000579223
)
(Non-protein coding transcript.)
genome : 207,647,958 - 207,648,032 (75)
query : 1 - 75 (75/75)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0204295)
HIX0204294
HIT000659343 (
NR_036077
)
(Non-protein coding transcript.)
genome : 207,647,958 - 207,648,032 (75)
query : 1 - 75 (75/75)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0204294)
HIX0002776
HIT000049223
(
AK129952
)
(FAST kinase domain-containing protein 2;)
genome : 207,650,039 - 207,653,471 (3,433)
query : 1 - 3,433 (3,433/3,435)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.999
InterPro :
IPR010622 : FAST kinase leucine-rich
GO :
0004672 : Molecular Function : protein kinase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 14, nucl 11, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002776)
HIX0002776
HIT000576198 (
ENST00000471788
)
(FAST kinase domain-containing protein 2;)
genome : 207,651,338 - 207,655,547 (4,210)
query : 1 - 842 (842/842)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 7, mito 5, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002776)
HIX0002776
HIT000047587
(
AK127714
)
(Conserved hypothetical protein.)
genome : 207,658,745 - 207,660,909 (2,165)
query : 1 - 2,165 (2,165/2,165)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, extr 7, cyto 4, cyto_pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002776)
HIX0180544
pHIT000100536 ( pHIT000100536 )
Representative transcript
(Hypothetical protein.)
genome : 207,661,474 - 207,726,272 (64,799)
query : 1 - 528 (528/528)
4 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0180544)
CAGE tag :
T02F0C5BBC2E
HIX0030277
HIT000093305
(
BC033975
)
Representative transcript
(Hypothetical short protein.)
genome : 207,685,919 - 207,687,018 (1,100)
query : 6 - 1,105 (1,100/1,120)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030277)
HIX0030277
HIT000675128 (
ENST00000561915
)
(Hypothetical short protein.)
genome : 207,685,914 - 207,687,018 (1,105)
query : 1 - 1,105 (1,105/1,105)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030277)
HIX0162817
HIT000536004 (
ENST00000438070
)
(Hypothetical short protein.)
genome : 207,731,519 - 207,733,013 (1,495)
query : 1 - 646 (646/646)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162817)
HIX0029863
HIT000110947 (
ENST00000272852
)
(Carboxypeptidase O; CPO; EC=3.4.17.-; Precursor;)
genome : 207,804,278 - 207,834,198 (29,921)
query : 1 - 1,209 (1,209/1,209)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.17.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R._mito 7.33333, mito 7, plas 6, mito_pero 6,
extr 5, E.R. 4.5, pero 3.5, nucl 3, cysk_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029863)
HIX0029863
HIT000214775 (
NM_173077
)
(Carboxypeptidase O; CPO; EC=3.4.17.-; Precursor;)
genome : 207,804,278 - 207,834,198 (29,921)
query : 1 - 1,209 (1,209/1,209)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.17.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R._mito 7.33333, mito 7, plas 6, mito_pero 6,
extr 5, E.R. 4.5, pero 3.5, nucl 3, cysk_plas 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029863)
HIX0029863
HIT000340207
(
BC112078
)
(Carboxypeptidase O; CPO; EC=3.4.17.-; Precursor;)
genome : 207,804,278 - 207,834,198 (29,921)
query : 1 - 1,209 (1,209/1,209)
9 exons
identity = 0.998
5'(1.000;1.000;0.990;1.000;0.991;0.989;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.17.-
InterPro :
IPR000834 : Peptidase M14, carboxypeptidase A
GO :
0004181 : Molecular Function : metallocarboxypeptidase activity
0006508 : Biological Process : proteolysis
0008270 : Molecular Function : zinc ion binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R._mito 7.33333, mito 7, plas 6, mito_pero 6,
E.R. 4.5, cyto_plas 4.5, extr 4, pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029863)
HIX0029863
HIT000340205
(
BC112076
)
(Carboxypeptidase O; CPO; EC=3.4.17.-; Precursor;)
genome : 207,804,278 - 207,834,195 (29,918)
query : 1 - 1,206 (1,206/1,206)
9 exons
identity = 0.997
5'(0.991;1.000;0.990;1.000;0.991;0.989;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.17.-
InterPro :
IPR000834 : Peptidase M14, carboxypeptidase A
GO :
0004181 : Molecular Function : metallocarboxypeptidase activity
0006508 : Biological Process : proteolysis
0008270 : Molecular Function : zinc ion binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R._mito 7.33333, mito 7, plas 6, mito_pero 6,
E.R. 4.5, cyto_plas 4.5, extr 4, pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029863)
HIX0029863
HIT000247910
(
AJ422118
)
Representative transcript
(Carboxypeptidase O; CPO; EC=3.4.17.-; Precursor;)
genome : 207,804,324 - 207,834,160 (29,837)
query : 1 - 1,125 (1,125/1,125)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.17.-
InterPro :
IPR000834 : Peptidase M14, carboxypeptidase A
GO :
0004181 : Molecular Function : metallocarboxypeptidase activity
0006508 : Biological Process : proteolysis
0008270 : Molecular Function : zinc ion binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R._mito 7.33333, mito 7, plas 6, mito_pero 6,
extr 5, E.R. 4.5, pero 3.5, nucl 3, cysk_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029863)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : BC122774
Macaca
sp. (Macaque) : ENSMMUT00000019739
Oryzias
sp. (Medaka) : ENSORLT00000005124
Pongo
sp. (Orangutan) : ENSPPYT00000015248
Tetraodon
sp. (Tetraodon) : GSTENT00019606001
Takifugu
sp. (Fugu) : SINFRUT00000162215
Pan
sp. (Chimpanzee) : XM_001138601
Monodelphis
sp. (Opossum) : XM_001370415
Equus
sp. (Horse) : XM_001918024
Gallus
sp. (Chicken) : XM_421950
Canis
sp. (Dog) : XM_847015
HIX0002777
HIT000724849 (
NM_001270943
)
(Krueppel-like factor 7; Ubiquitous krueppel-like factor;)
genome : 207,938,861 - 208,031,970 (93,110)
query : 1 - 7,990 (7,990/7,990)
4 exons
identity = 1.000
3'(1.000;1.000;0.998;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002777)
HIX0002777
HIT000724848 (
NM_001270942
)
(Krueppel-like factor 7; Ubiquitous krueppel-like factor;)
genome : 207,938,861 - 208,031,580 (92,720)
query : 1 - 8,021 (8,021/8,021)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 7.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002777)
HIX0002777
HIT000727471 (
NR_073108
)
(Krueppel-like factor 7;)
genome : 207,938,861 - 208,030,910 (92,050)
query : 1 - 7,827 (7,827/7,827)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002777)
HIX0002777
HIT000200510 (
NM_003709
)
(Krueppel-like factor 7; Ubiquitous krueppel-like factor;)
genome : 207,938,861 - 208,030,740 (91,880)
query : 1 - 8,433 (8,433/8,433)
4 exons
identity = 1.000
3'(1.000;1.000;0.998;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002777)
HIX0002777
HIT000118351 (
ENST00000309446
)
(Krueppel-like factor 7; Ubiquitous krueppel-like factor;)
genome : 207,938,861 - 208,030,669 (91,809)
query : 1 - 8,362 (8,362/8,362)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002777)
HIX0002777
HIT000724850 (
NM_001270944
)
(Krueppel-like factor 7 isoform 4.)
genome : 207,938,861 - 207,998,861 (60,001)
query : 1 - 7,954 (7,954/7,954)
4 exons
identity = 1.000
3'(1.000;1.000;0.998;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002777)
HIX0002777
pHIT000073661 ( pHIT000073661 )
(Hypothetical protein.)
genome : 207,939,007 - 207,939,291 (285)
query : 1 - 285 (285/285)
1 exon
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002777)
CAGE tag :
H37BA39J1201
HIX0002777
HIT000054674
(
BX537890
)
(Krueppel-like factor 7; Ubiquitous krueppel-like factor;)
genome : 207,943,821 - 208,031,970 (88,150)
query : 1 - 3,031 (3,031/3,058)
4 exons
identity = 0.998
3'(0.998;1.000;0.998;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002777)
HIX0002777
HIT000003443
(
AK000969
)
(Hypothetical protein.)
genome : 207,943,807 - 207,945,684 (1,878)
query : 1 - 1,875 (1,875/1,875)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 9, nucl 6.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002777)
HIX0002777
HIT000519133 (
ENST00000421199
)
(Krueppel-like factor 7; Ubiquitous krueppel-like factor;)
genome : 207,943,814 - 208,031,970 (88,157)
query : 1 - 3,037 (3,037/3,037)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002777)
HIX0002777
HIT000036036
(
BC012919
)
Representative transcript
(Krueppel-like factor 7; Ubiquitous krueppel-like factor;)
genome : 207,945,087 - 208,031,571 (86,485)
query : 1 - 1,786 (1,786/1,801)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002777)
HIX0002777
HIT000010643
(
AK027371
)
(Krueppel-like factor 7; Ubiquitous krueppel-like factor;)
genome : 207,945,078 - 208,030,441 (85,364)
query : 1 - 1,917 (1,917/1,917)
4 exons
identity = 0.998
3'(0.999;1.000;0.997;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002777)
HIX0002777
HIT000520949 (
ENST00000423015
)
(Krueppel-like factor 7; Ubiquitous krueppel-like factor;)
genome : 207,945,085 - 208,031,571 (86,487)
query : 1 - 1,788 (1,788/1,788)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002777)
HIX0002777
HIT000058394
(
AB015132
)
(Krueppel-like factor 7; Ubiquitous krueppel-like factor;)
genome : 207,945,529 - 208,030,614 (85,086)
query : 2 - 1,640 (1,639/1,640)
4 exons
identity = 0.999
3'(0.998;1.000;0.998;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002777)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AF338369
Danio
sp. (Zebrafish) : BC124329
Gallus
sp. (Chicken) : ENSGALT00000039047
Monodelphis
sp. (Opossum) : ENSMODT00000020304
Oryzias
sp. (Medaka) : ENSORLT00000012956
Pongo
sp. (Orangutan) : ENSPPYT00000015249
Tetraodon
sp. (Tetraodon) : GSTENT00015864001
Takifugu
sp. (Fugu) : SINFRUT00000134565
Rattus
sp. (Rat) : XM_001071689
Macaca
sp. (Macaque) : XM_001106942
Pan
sp. (Chimpanzee) : XM_001138873
Equus
sp. (Horse) : XM_001918084
Bos
sp. (Cow) : XM_617930
Canis
sp. (Dog) : XM_854951
HIX0002777
HIT000491936
(
AK297312
)
(Krueppel-like factor 7 isoform 4.)
genome : 207,945,543 - 207,998,848 (53,306)
query : 1 - 1,261 (1,261/1,261)
4 exons
identity = 0.998
3'(0.996;1.000;0.998;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002777)
HIX0002777
HIT000510348 (
ENST00000412414
)
(Krueppel-like factor 7 isoform 4.)
genome : 207,945,543 - 207,998,848 (53,306)
query : 1 - 1,259 (1,259/1,259)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002777)
HIX0002777
HIT000556206 (
ENST00000458272
)
(Krueppel-like factor 7;)
genome : 207,945,740 - 208,030,295 (84,556)
query : 1 - 539 (539/539)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002777)
HIX0002777
HIT000572431 (
ENST00000467833
)
(Krueppel-like factor 7;)
genome : 207,945,740 - 207,989,132 (43,393)
query : 1 - 438 (438/438)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002777)
HIX0002777
HIT000714956
(
HF546205
)
(Krueppel-like factor 7;)
genome : 207,945,758 - 208,030,493 (84,736)
query : 1 - 719 (719/719)
4 exons
identity = 0.999
3'(0.996;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002777)
HIX0002777
HIT000714957
(
HF546206
)
(Krueppel-like factor 6; B-cell-derived protein 1; Core promoter element-binding protein; GC-rich sites-binding factor GBF; Proto-oncogene BCD1; Suppressor of tumorigenicity 12 protein; Transcription factor Zf9;)
genome : 207,945,758 - 208,030,493 (84,736)
query : 1 - 658 (658/658)
3 exons
identity = 0.998
3'(0.996;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 15.5, cyto 8, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002777)
HIX0002777
HIT000433305
(
AK314439
)
(Krueppel-like factor 7; Ubiquitous krueppel-like factor;)
genome : 207,945,937 - 208,030,669 (84,733)
query : 1 - 1,288 (1,288/1,288)
4 exons
identity = 0.998
3'(1.000;1.000;0.998;0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002777)
HIX0002777
HIT000268981
(
CR542112
)
(Krueppel-like factor 7; Ubiquitous krueppel-like factor;)
genome : 207,945,937 - 208,030,292 (84,356)
query : 1 - 909 (909/909)
4 exons
identity = 0.999
3'(1.000;1.000;0.998;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002777)
HIX0203962
HIT000616602 (
ENST00000517199
)
(Non-protein coding transcript.)
genome : 207,974,711 - 207,974,797 (87)
query : 1 - 87 (87/87)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203962)
HIX0203962
HIT000659490 (
NR_036227
)
(Non-protein coding transcript.)
genome : 207,974,711 - 207,974,797 (87)
query : 1 - 87 (87/87)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203962)
HIX0162577
HIT000526711 (
ENST00000428777
)
(Conserved hypothetical protein.)
genome : 207,985,608 - 207,986,768 (1,161)
query : 1 - 655 (655/655)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, mito 6, cyto_mito 5, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162577)
HIX0002777
HIT000533536 (
ENST00000435602
)
(Krueppel-like factor 7 isoform 4.)
genome : 207,988,622 - 207,998,861 (10,240)
query : 1 - 578 (578/578)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 15, cyto 12, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002777)
HIX0002777
HIT000524097 (
ENST00000426163
)
(Krueppel-like factor 7; Ubiquitous krueppel-like factor;)
genome : 207,988,893 - 208,030,910 (42,018)
query : 1 - 750 (750/750)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 6, cyto 6, cyto_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002777)
HIX0002777
HIT000555896 (
ENST00000457962
)
(Krueppel-like factor 7;)
genome : 207,989,049 - 208,031,991 (42,943)
query : 1 - 594 (594/594)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002777)
HIX0002777
HIT000549178 (
ENST00000451244
)
(Krueppel-like factor 7;)
genome : 207,989,077 - 208,030,699 (41,623)
query : 1 - 574 (574/574)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 12, cyto 12, extr 4, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002777)
HIX0162756
HIT000533577 (
ENST00000435643
)
(Hypothetical short protein.)
genome : 208,038,358 - 208,087,514 (49,157)
query : 1 - 554 (554/554)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 18, extr 9, cysk_plas 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162756)
HIX0030306
HIT000515030 (
ENST00000417096
)
(Hypothetical short protein.)
genome : 208,051,441 - 208,100,607 (49,167)
query : 1 - 556 (556/556)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto_nucl 8.5, cyto 7.5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030306)
HIX0030306
HIT000095242
(
BC038530
)
Representative transcript
(Hypothetical short protein.)
genome : 208,084,388 - 208,100,789 (16,402)
query : 1 - 1,009 (1,009/1,039)
4 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto_nucl 8.5, cyto 7.5, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030306)
HIX0030306
HIT000546720 (
ENST00000448786
)
(Hypothetical short protein.)
genome : 208,084,575 - 208,100,790 (16,216)
query : 1 - 823 (823/823)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto_nucl 8.5, cyto 7.5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030306)
HIX0163217
HIT000552378 (
ENST00000454444
)
(Hypothetical short protein.)
genome : 208,091,673 - 208,093,032 (1,360)
query : 1 - 551 (551/551)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 4, cyto 3, mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0163217)
HIX0030306
HIT000538479 (
ENST00000440545
)
(Hypothetical short protein.)
genome : 208,100,023 - 208,102,599 (2,577)
query : 1 - 361 (361/361)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 7, nucl 5.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030306)
HIX0162621
HIT000538260 (
ENST00000440326
)
(Hypothetical short protein.)
genome : 208,104,374 - 208,110,312 (5,939)
query : 1 - 806 (806/806)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, cyto_nucl 11, extr 7, cyto 6, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162621)
HIX0162621
HIT000528428 (
ENST00000430494
)
(Hypothetical short protein.)
genome : 208,104,535 - 208,110,611 (6,077)
query : 1 - 974 (974/974)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 12, nucl 9.5, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162621)
HIX0161700
HIT000530347 (
ENST00000432413
)
(Hypothetical short protein.)
genome : 208,104,588 - 208,118,976 (14,389)
query : 1 - 539 (539/539)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, mito 11, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161700)
HIX0161700
HIT000510321 (
ENST00000412387
)
(Hypothetical short protein.)
genome : 208,104,845 - 208,394,519 (289,675)
query : 1 - 533 (533/533)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 10, nucl 4, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161700)
HIX0162838
HIT000536758 (
ENST00000438824
)
(Hypothetical short protein.)
genome : 208,125,169 - 208,135,414 (10,246)
query : 1 - 523 (523/523)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10.5, cyto 10, nucl 9, extr 8, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162838)
HIX0161700
HIT000516784 (
ENST00000418850
)
(Hypothetical protein.)
genome : 208,192,614 - 208,394,515 (201,902)
query : 1 - 741 (741/741)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 12, mito 6, cyto_nucl 6, cyto_pero 6,
cyto_plas 6, cyto_golg 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161700)
HIX0114418
pHIT000005413 ( pHIT000005413 )
Representative transcript
(Hypothetical protein.)
genome : 208,393,977 - 208,394,303 (327)
query : 1 - 327 (327/327)
1 exon
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0114418)
CAGE tag :
H05BB32K0508
HIX0214803
HIT000543737 (
ENST00000445803
)
(cAMP response element binding (CREB) protein family protein.)
genome : 208,394,647 - 208,435,045 (40,399)
query : 1 - 651 (651/651)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, nucl 16, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214803)
HIX0214803
HIT000597502 (
ENST00000494094
)
(Coactivator CBP, pKID domain containing protein.)
genome : 208,394,796 - 208,432,434 (37,639)
query : 1 - 580 (580/580)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, nucl 17, cyto 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214803)
HIX0214803
HIT000550408 (
ENST00000452474
)
(Coactivator CBP, pKID domain containing protein.)
genome : 208,394,828 - 208,432,280 (37,453)
query : 1 - 518 (518/518)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 15.5, cyto 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214803)
HIX0214803
HIT000512615 (
ENST00000414681
)
(Conserved hypothetical protein.)
genome : 208,414,985 - 208,425,072 (10,088)
query : 1 - 580 (580/580)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, nucl 14.5, cyto 14.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214803)
HIX0214803
HIT000584218 (
ENST00000480189
)
(cAMP response element binding (CREB) protein family protein.)
genome : 208,423,846 - 208,436,501 (12,656)
query : 1 - 569 (569/569)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, nucl 11, cyto 10, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214803)
HIX0214803
HIT000569156 (
ENST00000464407
)
(Coactivator CBP, pKID domain containing protein.)
genome : 208,423,895 - 208,432,874 (8,980)
query : 1 - 920 (920/920)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11, cyto 9, extr 8, mito 8, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214803)
HIX0214803
HIT000555035 (
ENST00000457101
)
(cAMP response element binding (CREB) protein family protein.)
genome : 208,423,950 - 208,435,012 (11,063)
query : 1 - 430 (430/430)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto_nucl 11, cyto 10, nucl 6, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214803)
HIX0214650
HIT000553691 (
ENST00000455757
)
(cAMP response element binding (CREB) protein family protein.)
genome : 208,440,010 - 208,442,789 (2,780)
query : 1 - 730 (730/730)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 13, extr 9, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214650)
HIX0214650
HIT000598365 (
ENST00000494983
)
(cAMP response element binding (CREB) protein family protein.)
genome : 208,441,360 - 208,462,182 (20,823)
query : 1 - 754 (754/754)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214650)
HIX0002779
HIT000530350 (
ENST00000432416
)
(Nicotinamide N-methyltransferase-like family protein.)
genome : 208,445,355 - 208,489,845 (44,491)
query : 1 - 869 (869/869)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 9, pero 8, mito 5, cyto_golg 5, extr 4,
mito_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002779)
HIX0002779
HIT000034380
(
BC009462
)
Representative transcript
(Protein-lysine methyltransferase METTL21A.)
genome : 208,446,078 - 208,490,055 (43,978)
query : 1 - 1,365 (1,365/1,383)
4 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR019410 : Nicotinamide N-methyltransferase-like
IPR029063 : S-adenosyl-L-methionine-dependent methyltransferase
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12, mito 6, extr 4, pero 4, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002779)
HIX0002779
HIT000556360 (
ENST00000458426
)
(Nicotinamide N-methyltransferase-like family protein.)
genome : 208,446,077 - 208,490,055 (43,979)
query : 1 - 1,366 (1,366/1,366)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12, mito 6, extr 4, pero 4, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002779)
HIX0002779
HIT000523066 (
ENST00000425132
)
(Nicotinamide N-methyltransferase-like family protein.)
genome : 208,446,419 - 208,490,103 (43,685)
query : 1 - 869 (869/869)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12, mito 6, extr 4, pero 4, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002779)
HIX0214650
HIT000544383 (
ENST00000446449
)
(Hypothetical short protein.)
genome : 208,461,889 - 208,463,906 (2,018)
query : 1 - 265 (265/265)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
This sequence is too short.
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214650)
HIX0214650
HIT000549098 (
ENST00000451164
)
(Hypothetical short protein.)
genome : 208,462,072 - 208,464,480 (2,409)
query : 1 - 813 (813/813)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214650)
HIX0214650
HIT000046215
(
AK126342
)
Representative transcript
(Conserved hypothetical protein.)
genome : 208,463,912 - 208,466,949 (3,038)
query : 1 - 3,036 (3,036/3,036)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214650)
HIX0214570
HIT000043825
(
AK123952
)
(Conserved hypothetical protein.)
genome : 208,465,812 - 208,468,041 (2,230)
query : 1 - 2,226 (2,226/2,226)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214570)
HIX0214570
HIT000016401
(
AK091534
)
Representative transcript
(Conserved hypothetical protein.)
genome : 208,467,342 - 208,470,282 (2,941)
query : 1 - 2,937 (2,937/2,937)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.6667, cyto 12.5, nucl 9.5,
cyto_plas 8.66667, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214570)
HIX0214918
HIT000019971
(
AK095116
)
Representative transcript
(Conserved hypothetical protein.)
genome : 208,468,158 - 208,470,282 (2,125)
query : 1 - 2,121 (2,121/2,121)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, mito 7, cyto_nucl 6.16667, nucl 5.5,
cyto 3.5, E.R._mito 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214918)
HIX0002779
HIT000582043 (
ENST00000477919
)
(Conserved hypothetical protein.)
genome : 208,473,838 - 208,477,750 (3,913)
query : 1 - 1,611 (1,611/1,611)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 11, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002779)
HIX0002779
HIT000509366 (
ENST00000411432
)
(Nicotinamide N-methyltransferase-like family protein.)
genome : 208,473,839 - 208,489,973 (16,135)
query : 1 - 4,805 (4,805/4,805)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14, mito 6, nucl 4, extr 3, pero 3, E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002779)
HIX0002779
HIT000559278 (
NM_001127395
)
(Nicotinamide N-methyltransferase-like family protein.)
genome : 208,473,839 - 208,489,973 (16,135)
query : 1 - 4,805 (4,805/4,805)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14, mito 6, nucl 4, extr 3, pero 3, E.R._mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002779)
HIX0002779
HIT000213186 (
NM_145280
)
(Nicotinamide N-methyltransferase-like family protein.)
genome : 208,473,839 - 208,489,696 (15,858)
query : 1 - 4,748 (4,748/4,748)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14, mito 6, nucl 4, extr 3, pero 3, E.R._mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002779)
HIX0002779
HIT000460834_12
(
DQ594303
)
(Non-protein coding transcript.)
genome : 208,476,266 - 208,476,295 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002779)
HIX0002779
HIT000041918
(
BC033720
)
(Protein-lysine methyltransferase METTL21A; EC=2.1.1.-; Hepatocellular carcinoma-associated antigen 557b; Methyltransferase-like protein 21A;)
genome : 208,476,840 - 208,489,707 (12,868)
query : 1 - 1,756 (1,756/1,770)
4 exons
identity = 0.990
3'(0.989;1.000;1.000;0.972)5'
coverage = 1.000
EC number :
EC 2.1.1.-
InterPro :
IPR019410 : Nicotinamide N-methyltransferase-like
IPR029063 : S-adenosyl-L-methionine-dependent methyltransferase
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14, mito 6, nucl 4, extr 3, pero 3, E.R._mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002779)
HIX0002779
HIT000545941 (
ENST00000448007
)
(Nicotinamide N-methyltransferase-like family protein.)
genome : 208,476,840 - 208,489,707 (12,868)
query : 1 - 1,758 (1,758/1,770)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14, mito 6, nucl 4, extr 3, pero 3, E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002779)
HIX0002779
HIT000018679
(
AK093812
)
(Protein-lysine methyltransferase METTL21A; EC=2.1.1.-; Hepatocellular carcinoma-associated antigen 557b; Methyltransferase-like protein 21A;)
genome : 208,476,841 - 208,489,696 (12,856)
query : 1 - 1,744 (1,744/1,744)
4 exons
identity = 0.993
3'(0.992;1.000;0.994;1.000)5'
coverage = 1.000
EC number :
EC 2.1.1.-
InterPro :
IPR019410 : Nicotinamide N-methyltransferase-like
IPR029063 : S-adenosyl-L-methionine-dependent methyltransferase
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14, extr 5, mito 5, nucl 3, plas 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002779)
HIX0002779
HIT000110943 (
ENST00000272839
)
(Nicotinamide N-methyltransferase-like family protein.)
genome : 208,477,447 - 208,489,275 (11,829)
query : 1 - 1,210 (1,210/1,210)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 9.5, mito 5, pero 5, mito_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002779)
HIX0002779
HIT000079947
(
AF455817
)
(Protein-lysine methyltransferase METTL21A; EC=2.1.1.-; Hepatocellular carcinoma-associated antigen 557b; Methyltransferase-like protein 21A;)
genome : 208,477,467 - 208,490,068 (12,602)
query : 2 - 1,071 (1,070/1,087)
4 exons
identity = 0.993
3'(0.997;1.000;1.000;0.938)5'
coverage = 0.999
EC number :
EC 2.1.1.-
InterPro :
IPR019410 : Nicotinamide N-methyltransferase-like
IPR029063 : S-adenosyl-L-methionine-dependent methyltransferase
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14, mito 6, nucl 4, extr 3, pero 3, E.R._mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002779)
HIX0002779
HIT000546757 (
ENST00000448823
)
(Conserved hypothetical protein.)
genome : 208,477,451 - 208,489,104 (11,654)
query : 1 - 869 (869/869)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 8, cyto_nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002779)
HIX0002779
HIT000505784 (
ENST00000406927
)
(Nicotinamide N-methyltransferase-like family protein.)
genome : 208,477,467 - 208,490,102 (12,636)
query : 1 - 1,103 (1,103/1,103)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14, mito 6, nucl 4, extr 3, pero 3, E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002779)
HIX0002779
HIT000524009 (
ENST00000426075
)
(Nicotinamide N-methyltransferase-like family protein.)
genome : 208,477,567 - 208,489,290 (11,724)
query : 1 - 1,051 (1,051/1,051)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14, mito 6, nucl 4, extr 3, pero 3, E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002779)
HIX0002779
HIT000540455 (
ENST00000442521
)
(Nicotinamide N-methyltransferase-like family protein.)
genome : 208,477,704 - 208,490,651 (12,948)
query : 1 - 1,003 (1,003/1,003)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14, mito 6, nucl 4, extr 3, pero 3, E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002779)
HIX0002779
HIT000575572 (
ENST00000471128
)
(Nicotinamide N-methyltransferase-like family protein.)
genome : 208,485,458 - 208,489,986 (4,529)
query : 1 - 546 (546/546)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12, mito 5, extr 4, pero 4, mito_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002779)
HIX0002779
HIT000566306 (
ENST00000461419
)
(Nicotinamide N-methyltransferase-like family protein.)
genome : 208,486,520 - 208,490,652 (4,133)
query : 1 - 551 (551/559)
3 exons
identity = 0.993
3'(0.967;1.000;1.000)5'
coverage = 0.986
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 12, mito 12, cyto 4, nucl 2, cyto_pero 2,
cyto_golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002779)
HIX0030059
HIT000059566
(
AB050775
)
Representative transcript
(Conserved hypothetical protein.)
genome : 208,495,205 - 208,495,946 (742)
query : 1 - 742 (742/742)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto_mito 7, mito 6, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030059)
HIX0162871
HIT000538294 (
ENST00000440360
)
(Ribosomal protein S14 family protein.)
genome : 208,519,505 - 208,519,675 (171)
query : 1 - 171 (171/171)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162871)
HIX0162602
HIT000527664 (
ENST00000429730
)
(Conserved hypothetical protein.)
genome : 208,527,099 - 208,531,748 (4,650)
query : 1 - 492 (492/492)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, extr 11, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162602)
HIX0118948
HIT000524218 (
ENST00000426284
)
(PKC-activated phosphatase-1 inhibitor family protein.)
genome : 208,546,314 - 208,546,757 (444)
query : 1 - 444 (444/444)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, mito 13, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0118948)
HIX0118948
HIT000608922_01 (
ENST00000509033
)
(PKC-activated phosphatase-1 inhibitor family protein.)
genome : 208,546,314 - 208,546,757 (444)
query : 1 - 445 (445/445)
1 exon
identity = 0.953
5'(0.953)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, mito 10, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0118948)
HIX0002778
HIT000213789 (
NM_152523
)
(Cyclin-Y-like protein 1 isoform 2.)
genome : 208,576,264 - 208,620,895 (44,632)
query : 1 - 3,658 (3,658/3,674)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 19, nucl 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002778)
HIX0002778
HIT000560511 (
NM_001142300
)
(Cyclin-Y-like protein 1;)
genome : 208,576,264 - 208,620,895 (44,632)
query : 1 - 3,757 (3,757/3,773)
8 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_pero 7.5, cyto 7, mito 7, pero 6, mito_nucl 6,
extr 5, nucl 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002778)
HIX0002778
HIT000022605
(
AK097751
)
Representative transcript
(Cyclin-Y-like protein 1 isoform 2.)
genome : 208,576,264 - 208,619,189 (42,926)
query : 1 - 1,953 (1,953/1,953)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006671 : Cyclin, N-terminal
IPR013763 : Cyclin-like
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 19, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002778)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK132782
Danio
sp. (Zebrafish) : BC124226
Gallus
sp. (Chicken) : CR385362
Rattus
sp. (Rat) : DQ602990
Equus
sp. (Horse) : ENSECAT00000019254
Macaca
sp. (Macaque) : ENSMMUT00000028432
Oryzias
sp. (Medaka) : ENSORLT00000008553
Pongo
sp. (Orangutan) : ENSPPYT00000015254
Tetraodon
sp. (Tetraodon) : GSTENT00016592001
Takifugu
sp. (Fugu) : SINFRUT00000135763
Monodelphis
sp. (Opossum) : XM_001370098
Canis
sp. (Dog) : XM_545613
Bos
sp. (Cow) : XM_618363
Pan
sp. (Chimpanzee) : XR_019991
HIX0002778
HIT000475701 (
ENST00000392209
)
(Cyclin-Y-like protein 1 isoform 2.)
genome : 208,576,264 - 208,619,189 (42,926)
query : 1 - 1,952 (1,952/1,952)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 19, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002778)
HIX0002778
eHIT000014427 ( ESTsASS_2_528 )
(Non-protein coding transcript.)
genome : 208,576,366 - 208,618,870 (42,505)
query : 1 - 1,783 (1,783/1,783)
10 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002778)
ESTs used for assembly :
DA043723,BI830899,BF818623,CT000112
DA737368,DN996802,AA416803,DN992603
HIX0002778
HIT000098500
(
BC047293
)
(Cyclin-Y-like protein 1;)
genome : 208,576,372 - 208,579,548 (3,177)
query : 1 - 952 (952/997)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 5, cyto 4, mito 4, cyto_pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002778)
HIX0002778
HIT000518756 (
ENST00000420822
)
(Cyclin-Y-like protein 1;)
genome : 208,576,372 - 208,579,548 (3,177)
query : 1 - 952 (952/952)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 5, cyto 4, mito 4, cyto_pero 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002778)
HIX0002778
HIT000114160 (
ENST00000295414
)
(Cyclin-Y-like protein 1;)
genome : 208,576,410 - 208,620,898 (44,489)
query : 1 - 3,767 (3,767/3,767)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_pero 7.5, cyto 7, mito 7, nucl 6, pero 6, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002778)
HIX0002778
HIT000262498
(
BC067253
)
(Cyclin-Y-like protein 1 isoform 1.)
genome : 208,576,475 - 208,619,968 (43,494)
query : 1 - 2,617 (2,617/2,632)
8 exons
identity = 0.996
5'(0.995;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006671 : Cyclin, N-terminal
IPR013763 : Cyclin-like
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_pero 7.5, cyto 7, mito 7, pero 6, mito_nucl 6,
extr 5, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002778)
HIX0002778
HIT000132512 (
ENST00000339882
)
(Cyclin-Y-like protein 1;)
genome : 208,576,475 - 208,619,968 (43,494)
query : 1 - 2,619 (2,619/2,619)
8 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_pero 7.5, cyto 7, mito 7, pero 6, mito_nucl 6,
extr 5, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002778)
HIX0002778
HIT000550246 (
ENST00000452312
)
(Cyclin-Y-like protein 1 isoform 1.)
genome : 208,589,522 - 208,615,838 (26,317)
query : 16 - 709 (694/709)
7 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.979
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, plas 7, extr_plas 5, nucl 4, mito 3, pero 3,
mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002778)
HIX0200457
pHIT000005404 ( pHIT000005404 )
Representative transcript
(Conserved hypothetical protein.)
genome : 206,980,894 - 207,024,705 (43,812)
query : 1 - 2,019 (2,019/2,019)
15 exons
InterPro :
IPR000283 : NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site
IPR002930 : Glycine cleavage system H-protein
IPR006656 : Molybdopterin oxidoreductase
IPR006963 : Molybdopterin oxidoreductase, 4Fe-4S domain
IPR010228 : NADH:ubiquinone oxidoreductase, subunit G
IPR011053 : Single hybrid motif
IPR019574 : NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding
GO :
0005960 : Cellular Component : glycine cleavage complex
0006546 : Biological Process : glycine catabolic process
0008137 : Molecular Function : NADH dehydrogenase (ubiquinone) activity
0016020 : Cellular Component : membrane
0016491 : Molecular Function : oxidoreductase activity
0016651 : Molecular Function : oxidoreductase activity, acting on NAD(P)H
0042773 : Biological Process : ATP synthesis coupled electron transport
0051536 : Molecular Function : iron-sulfur cluster binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200457)
CAGE tag :
H05BE57B1903
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB169174
Gallus
sp. (Chicken) : AJ720577
Mus
sp. (Mouse) : AK142711
Rattus
sp. (Rat) : AY724535
Danio
sp. (Zebrafish) : BC085651
Bos
sp. (Cow) : BC120069
Pongo
sp. (Orangutan) : CR859585
Pan
sp. (Chimpanzee) : DQ885672
Oryzias
sp. (Medaka) : ENSORLT00000007556
Takifugu
sp. (Fugu) : SINFRUT00000131791
Monodelphis
sp. (Opossum) : XM_001370787
Equus
sp. (Horse) : XM_001505117
Canis
sp. (Dog) : XM_854665
HIX0002769
HIT000104460 (
ENST00000233190
)
(NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial; EC=1.6.5.3; EC=1.6.99.3; Complex I-75kD; CI-75kD; Precursor;)
genome : 206,986,149 - 207,024,327 (38,179)
query : 1 - 5,211 (5,211/5,211)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.6.5.3
,
EC 1.6.99.3
KEGG pathway :
00190 : Oxidative phosphorylation (12)
00910 : Nitrogen metabolism (50)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22.5, cyto_mito 14, cyto 4.5, plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002769)
HIX0002769
HIT000041164
(
BC030833
)
(NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial; EC=1.6.5.3; EC=1.6.99.3; Complex I-75kD; CI-75kD; Precursor;)
genome : 206,986,166 - 207,024,147 (37,982)
query : 1 - 3,732 (3,732/3,749)
20 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;0.995;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
EC number :
EC 1.6.5.3
,
EC 1.6.99.3
KEGG pathway :
00190 : Oxidative phosphorylation (12)
00910 : Nitrogen metabolism (50)
01100 : Metabolic pathways (1346)
InterPro :
IPR000283 : NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site
IPR001041 : 2Fe-2S ferredoxin-type domain
IPR006656 : Molybdopterin oxidoreductase
IPR006963 : Molybdopterin oxidoreductase, 4Fe-4S domain
IPR010228 : NADH:ubiquinone oxidoreductase, subunit G
IPR012675 : Beta-grasp domain
IPR015405 : NADH-quinone oxidoreductase, chain G, C-terminal
IPR019574 : NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding
GO :
0008137 : Molecular Function : NADH dehydrogenase (ubiquinone) activity
0009055 : Molecular Function : electron carrier activity
0016020 : Cellular Component : membrane
0016491 : Molecular Function : oxidoreductase activity
0016651 : Molecular Function : oxidoreductase activity, acting on NAD(P)H
0042773 : Biological Process : ATP synthesis coupled electron transport
0051536 : Molecular Function : iron-sulfur cluster binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22.5, cyto_mito 14, cyto 4.5, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002769)
HIX0002769
HIT000201724 (
NM_005006
)
(NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial; EC=1.6.5.3; EC=1.6.99.3; Complex I-75kD; CI-75kD; Precursor;)
genome : 206,987,803 - 207,024,243 (36,441)
query : 1 - 3,473 (3,473/3,473)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.6.5.3
,
EC 1.6.99.3
KEGG pathway :
00190 : Oxidative phosphorylation (12)
00910 : Nitrogen metabolism (50)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22.5, cyto_mito 14, cyto 4.5, plas 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002769)
HIX0002769
HIT000656741 (
NM_001199981
)
(NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial isoform 2 precursor.)
genome : 206,987,803 - 207,024,243 (36,441)
query : 1 - 3,365 (3,365/3,365)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.6.5.3
,
EC 1.6.99.3
KEGG pathway :
00190 : Oxidative phosphorylation (12)
00910 : Nitrogen metabolism (50)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23.5, cyto_mito 14, cyto 3.5, nucl 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002769)
HIX0002769
HIT000656742 (
NM_001199982
)
(NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial isoform 3.)
genome : 206,987,803 - 207,024,243 (36,441)
query : 1 - 3,196 (3,196/3,196)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.6.5.3
,
EC 1.6.99.3
KEGG pathway :
00190 : Oxidative phosphorylation (12)
00910 : Nitrogen metabolism (50)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 12.5, nucl 6.5, plas 3, pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002769)
HIX0002769
HIT000656743 (
NM_001199983
)
(NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial isoform 4.)
genome : 206,987,803 - 207,024,243 (36,441)
query : 1 - 3,381 (3,381/3,381)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.6.5.3
,
EC 1.6.99.3
KEGG pathway :
00190 : Oxidative phosphorylation (12)
00910 : Nitrogen metabolism (50)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, cyto_mito 10.6667, mito 9, pero 9,
cyto_nucl 7.33333, E.R._mito 5.33333
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002769)
HIX0002769
HIT000656744 (
NM_001199984
)
(NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial; EC=1.6.5.3; EC=1.6.99.3; Complex I-75kD; CI-75kD; Precursor;)
genome : 206,987,803 - 207,023,918 (36,116)
query : 1 - 3,393 (3,393/3,393)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.6.5.3
,
EC 1.6.99.3
KEGG pathway :
00190 : Oxidative phosphorylation (12)
00910 : Nitrogen metabolism (50)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21.5, cyto_mito 13.5, cyto 4.5, nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002769)
HIX0002769
HIT000521659 (
ENST00000423725
)
(NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial isoform 4.)
genome : 206,988,543 - 207,024,233 (35,691)
query : 1 - 2,631 (2,631/2,631)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.6.5.3
KEGG pathway :
00190 : Oxidative phosphorylation (12)
00910 : Nitrogen metabolism (50)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, cyto_mito 10.6667, mito 9, pero 9,
cyto_nucl 7.33333, E.R._mito 5.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002769)
HIX0002769
HIT000495209
(
AK300585
)
(NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial isoform 4.)
genome : 206,988,543 - 207,024,147 (35,605)
query : 1 - 2,545 (2,545/2,545)
18 exons
identity = 0.999
3'(1.000;1.000;1.000;0.991;1.000;1.000;1.000;
0.988;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.6.5.3
KEGG pathway :
00190 : Oxidative phosphorylation (12)
00910 : Nitrogen metabolism (50)
01100 : Metabolic pathways (1346)
InterPro :
IPR000283 : NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site
IPR001041 : 2Fe-2S ferredoxin-type domain
IPR006656 : Molybdopterin oxidoreductase
IPR006963 : Molybdopterin oxidoreductase, 4Fe-4S domain
IPR010228 : NADH:ubiquinone oxidoreductase, subunit G
IPR015405 : NADH-quinone oxidoreductase, chain G, C-terminal
IPR019574 : NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding
GO :
0008137 : Molecular Function : NADH dehydrogenase (ubiquinone) activity
0009055 : Molecular Function : electron carrier activity
0016020 : Cellular Component : membrane
0016491 : Molecular Function : oxidoreductase activity
0016651 : Molecular Function : oxidoreductase activity, acting on NAD(P)H
0042773 : Biological Process : ATP synthesis coupled electron transport
0051536 : Molecular Function : iron-sulfur cluster binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, cyto_mito 10.6667, mito 9, pero 9,
cyto_nucl 7.33333, E.R._mito 5.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002769)
HIX0002769
HIT000322448
(
X61100
)
(NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial; EC=1.6.5.3; EC=1.6.99.3; Complex I-75kD; CI-75kD; Precursor;)
genome : 206,988,633 - 207,024,104 (35,472)
query : 3 - 2,507 (2,505/2,525)
19 exons
identity = 0.996
3'(1.000;0.977;1.000;0.991;1.000;1.000;1.000;
1.000;0.987;1.000;1.000;0.985;1.000)5'
coverage = 0.999
EC number :
EC 1.6.5.3
,
EC 1.6.99.3
KEGG pathway :
00190 : Oxidative phosphorylation (12)
00910 : Nitrogen metabolism (50)
01100 : Metabolic pathways (1346)
InterPro :
IPR000283 : NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site
IPR001041 : 2Fe-2S ferredoxin-type domain
IPR006656 : Molybdopterin oxidoreductase
IPR006963 : Molybdopterin oxidoreductase, 4Fe-4S domain
IPR010228 : NADH:ubiquinone oxidoreductase, subunit G
IPR012675 : Beta-grasp domain
IPR015405 : NADH-quinone oxidoreductase, chain G, C-terminal
IPR019574 : NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding
GO :
0008137 : Molecular Function : NADH dehydrogenase (ubiquinone) activity
0009055 : Molecular Function : electron carrier activity
0016020 : Cellular Component : membrane
0016491 : Molecular Function : oxidoreductase activity
0016651 : Molecular Function : oxidoreductase activity, acting on NAD(P)H
0042773 : Biological Process : ATP synthesis coupled electron transport
0051536 : Molecular Function : iron-sulfur cluster binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21.5, cyto_mito 13.5, cyto 4.5, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002769)
HIX0002769
HIT000023225
(
AK098395
)
(NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial isoform 3.)
genome : 206,988,634 - 207,024,112 (35,479)
query : 1 - 1,866 (1,866/1,866)
14 exons
identity = 0.995
3'(1.000;0.992;1.000;0.991;0.969;0.974;1.000;
0.979)5'
coverage = 1.000
EC number :
EC 1.6.5.3
KEGG pathway :
00190 : Oxidative phosphorylation (12)
00910 : Nitrogen metabolism (50)
01100 : Metabolic pathways (1346)
InterPro :
IPR006656 : Molybdopterin oxidoreductase
IPR006963 : Molybdopterin oxidoreductase, 4Fe-4S domain
IPR015405 : NADH-quinone oxidoreductase, chain G, C-terminal
GO :
0016491 : Molecular Function : oxidoreductase activity
0016651 : Molecular Function : oxidoreductase activity, acting on NAD(P)H
0051536 : Molecular Function : iron-sulfur cluster binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25.5, cyto_mito 14.5, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002769)
HIX0002769
HIT000490590
(
AK295966
)
(NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial; EC=1.6.5.3; EC=1.6.99.3; Complex I-75kD; CI-75kD; Precursor;)
genome : 206,988,669 - 207,024,149 (35,481)
query : 1 - 2,171 (2,171/2,171)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.988)5'
coverage = 1.000
EC number :
EC 1.6.5.3
,
EC 1.6.99.3
KEGG pathway :
00190 : Oxidative phosphorylation (12)
00910 : Nitrogen metabolism (50)
01100 : Metabolic pathways (1346)
InterPro :
IPR000283 : NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site
IPR006656 : Molybdopterin oxidoreductase
IPR006963 : Molybdopterin oxidoreductase, 4Fe-4S domain
IPR010228 : NADH:ubiquinone oxidoreductase, subunit G
IPR015405 : NADH-quinone oxidoreductase, chain G, C-terminal
IPR019574 : NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding
GO :
0008137 : Molecular Function : NADH dehydrogenase (ubiquinone) activity
0016020 : Cellular Component : membrane
0016491 : Molecular Function : oxidoreductase activity
0016651 : Molecular Function : oxidoreductase activity, acting on NAD(P)H
0042773 : Biological Process : ATP synthesis coupled electron transport
0051536 : Molecular Function : iron-sulfur cluster binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, nucl 5.5, cyto_nucl 5.5, cyto 4.5, plas 3,
E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002769)
HIX0002769
HIT000554945 (
ENST00000457011
)
(NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial; EC=1.6.5.3; EC=1.6.99.3; Complex I-75kD; CI-75kD; Precursor;)
genome : 206,988,669 - 207,024,149 (35,481)
query : 1 - 2,171 (2,171/2,171)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.6.5.3
,
EC 1.6.99.3
KEGG pathway :
00190 : Oxidative phosphorylation (12)
00910 : Nitrogen metabolism (50)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, nucl 6.5, cyto_nucl 6, cyto 4.5, plas 3,
E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002769)
HIX0002769
HIT000490329
(
AK295705
)
(NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial isoform 2 precursor.)
genome : 206,988,680 - 207,024,149 (35,470)
query : 1 - 2,394 (2,394/2,394)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.6.5.3
KEGG pathway :
00190 : Oxidative phosphorylation (12)
00910 : Nitrogen metabolism (50)
01100 : Metabolic pathways (1346)
InterPro :
IPR000283 : NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site
IPR006656 : Molybdopterin oxidoreductase
IPR006963 : Molybdopterin oxidoreductase, 4Fe-4S domain
IPR010228 : NADH:ubiquinone oxidoreductase, subunit G
IPR015405 : NADH-quinone oxidoreductase, chain G, C-terminal
IPR019574 : NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding
GO :
0008137 : Molecular Function : NADH dehydrogenase (ubiquinone) activity
0016020 : Cellular Component : membrane
0016491 : Molecular Function : oxidoreductase activity
0016651 : Molecular Function : oxidoreductase activity, acting on NAD(P)H
0042773 : Biological Process : ATP synthesis coupled electron transport
0051536 : Molecular Function : iron-sulfur cluster binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23.5, cyto_mito 14, cyto 3.5, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002769)
HIX0002769
HIT000538208 (
ENST00000440274
)
(NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial isoform 2 precursor.)
genome : 206,988,680 - 207,024,149 (35,470)
query : 1 - 2,394 (2,394/2,394)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.6.5.3
KEGG pathway :
00190 : Oxidative phosphorylation (12)
00910 : Nitrogen metabolism (50)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23.5, cyto_mito 14, cyto 3.5, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002769)
HIX0002769
HIT000089800
(
BC018900
)
(NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial; EC=1.6.5.3; EC=1.6.99.3; Complex I-75kD; CI-75kD; Precursor;)
genome : 206,988,794 - 207,024,113 (35,320)
query : 7 - 2,358 (2,352/2,375)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.997
EC number :
EC 1.6.5.3
,
EC 1.6.99.3
KEGG pathway :
00190 : Oxidative phosphorylation (12)
00910 : Nitrogen metabolism (50)
01100 : Metabolic pathways (1346)
InterPro :
IPR000283 : NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site
IPR001041 : 2Fe-2S ferredoxin-type domain
IPR006656 : Molybdopterin oxidoreductase
IPR006963 : Molybdopterin oxidoreductase, 4Fe-4S domain
IPR010228 : NADH:ubiquinone oxidoreductase, subunit G
IPR012675 : Beta-grasp domain
IPR015405 : NADH-quinone oxidoreductase, chain G, C-terminal
IPR019574 : NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding
GO :
0008137 : Molecular Function : NADH dehydrogenase (ubiquinone) activity
0009055 : Molecular Function : electron carrier activity
0016020 : Cellular Component : membrane
0016491 : Molecular Function : oxidoreductase activity
0016651 : Molecular Function : oxidoreductase activity, acting on NAD(P)H
0042773 : Biological Process : ATP synthesis coupled electron transport
0051536 : Molecular Function : iron-sulfur cluster binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22.5, cyto_mito 14, cyto 4.5, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002769)
HIX0002769
HIT000039501
(
BC022368
)
Representative transcript
(NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial; EC=1.6.5.3; EC=1.6.99.3; Complex I-75kD; CI-75kD; Precursor;)
genome : 206,988,824 - 207,024,144 (35,321)
query : 1 - 2,353 (2,353/2,382)
19 exons
identity = 0.998
3'(1.000;0.992;1.000;0.991;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.988)5'
coverage = 1.000
EC number :
EC 1.6.5.3
,
EC 1.6.99.3
KEGG pathway :
00190 : Oxidative phosphorylation (12)
00910 : Nitrogen metabolism (50)
01100 : Metabolic pathways (1346)
InterPro :
IPR000283 : NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site
IPR001041 : 2Fe-2S ferredoxin-type domain
IPR006656 : Molybdopterin oxidoreductase
IPR006963 : Molybdopterin oxidoreductase, 4Fe-4S domain
IPR010228 : NADH:ubiquinone oxidoreductase, subunit G
IPR012675 : Beta-grasp domain
IPR015405 : NADH-quinone oxidoreductase, chain G, C-terminal
IPR019574 : NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding
GO :
0008137 : Molecular Function : NADH dehydrogenase (ubiquinone) activity
0009055 : Molecular Function : electron carrier activity
0016020 : Cellular Component : membrane
0016491 : Molecular Function : oxidoreductase activity
0016651 : Molecular Function : oxidoreductase activity, acting on NAD(P)H
0042773 : Biological Process : ATP synthesis coupled electron transport
0051536 : Molecular Function : iron-sulfur cluster binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22.5, cyto_mito 14, cyto 4.5, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002769)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB169174
Gallus
sp. (Chicken) : AJ720577
Mus
sp. (Mouse) : AK142711
Rattus
sp. (Rat) : AY724535
Danio
sp. (Zebrafish) : BC085651
Bos
sp. (Cow) : BC120069
Pongo
sp. (Orangutan) : CR859585
Pan
sp. (Chimpanzee) : DQ885672
Oryzias
sp. (Medaka) : ENSORLT00000007556
Tetraodon
sp. (Tetraodon) : GSTENT00007136001
Takifugu
sp. (Fugu) : SINFRUT00000131791
Takifugu
sp. (Fugu) : SINFRUT00000165329
Monodelphis
sp. (Opossum) : XM_001370787
Equus
sp. (Horse) : XM_001505117
Canis
sp. (Dog) : XM_854665
HIX0002769
HIT000086295
(
BC004133
)
(NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial; EC=1.6.5.3; EC=1.6.99.3; Complex I-75kD; CI-75kD; Precursor;)
genome : 206,988,824 - 207,024,151 (35,328)
query : 1 - 2,358 (2,358/2,375)
19 exons
identity = 0.999
3'(1.000;0.984;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.6.5.3
,
EC 1.6.99.3
KEGG pathway :
00190 : Oxidative phosphorylation (12)
00910 : Nitrogen metabolism (50)
01100 : Metabolic pathways (1346)
InterPro :
IPR000283 : NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site
IPR001041 : 2Fe-2S ferredoxin-type domain
IPR006656 : Molybdopterin oxidoreductase
IPR006963 : Molybdopterin oxidoreductase, 4Fe-4S domain
IPR010228 : NADH:ubiquinone oxidoreductase, subunit G
IPR012675 : Beta-grasp domain
IPR015405 : NADH-quinone oxidoreductase, chain G, C-terminal
IPR019574 : NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding
GO :
0008137 : Molecular Function : NADH dehydrogenase (ubiquinone) activity
0009055 : Molecular Function : electron carrier activity
0016020 : Cellular Component : membrane
0016491 : Molecular Function : oxidoreductase activity
0016651 : Molecular Function : oxidoreductase activity, acting on NAD(P)H
0042773 : Biological Process : ATP synthesis coupled electron transport
0051536 : Molecular Function : iron-sulfur cluster binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22.5, cyto_mito 14, cyto 4.5, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002769)
HIX0002769
HIT000490611
(
AK295987
)
(NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial; EC=1.6.5.3; EC=1.6.99.3; Complex I-75kD; CI-75kD; Precursor;)
genome : 206,988,825 - 207,023,918 (35,094)
query : 1 - 2,371 (2,371/2,374)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
EC number :
EC 1.6.5.3
,
EC 1.6.99.3
KEGG pathway :
00190 : Oxidative phosphorylation (12)
00910 : Nitrogen metabolism (50)
01100 : Metabolic pathways (1346)
InterPro :
IPR000283 : NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site
IPR001041 : 2Fe-2S ferredoxin-type domain
IPR006656 : Molybdopterin oxidoreductase
IPR006963 : Molybdopterin oxidoreductase, 4Fe-4S domain
IPR010228 : NADH:ubiquinone oxidoreductase, subunit G
IPR012675 : Beta-grasp domain
IPR015405 : NADH-quinone oxidoreductase, chain G, C-terminal
IPR019574 : NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding
GO :
0008137 : Molecular Function : NADH dehydrogenase (ubiquinone) activity
0009055 : Molecular Function : electron carrier activity
0016020 : Cellular Component : membrane
0016491 : Molecular Function : oxidoreductase activity
0016651 : Molecular Function : oxidoreductase activity, acting on NAD(P)H
0042773 : Biological Process : ATP synthesis coupled electron transport
0051536 : Molecular Function : iron-sulfur cluster binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21.5, cyto_mito 13.5, cyto 4.5, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002769)
HIX0002769
HIT000553868 (
ENST00000455934
)
(NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial; EC=1.6.5.3; EC=1.6.99.3; Complex I-75kD; CI-75kD; Precursor;)
genome : 206,988,823 - 207,023,918 (35,096)
query : 1 - 2,373 (2,373/2,373)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.6.5.3
,
EC 1.6.99.3
KEGG pathway :
00190 : Oxidative phosphorylation (12)
00910 : Nitrogen metabolism (50)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21.5, cyto_mito 13.5, cyto 4.5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002769)
HIX0002769
HIT000492944
(
AK298320
)
(NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial isoform 3.)
genome : 206,988,825 - 207,024,149 (35,325)
query : 1 - 2,080 (2,080/2,080)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.6.5.3
KEGG pathway :
00190 : Oxidative phosphorylation (12)
00910 : Nitrogen metabolism (50)
01100 : Metabolic pathways (1346)
InterPro :
IPR000283 : NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site
IPR006656 : Molybdopterin oxidoreductase
IPR006963 : Molybdopterin oxidoreductase, 4Fe-4S domain
IPR010228 : NADH:ubiquinone oxidoreductase, subunit G
IPR015405 : NADH-quinone oxidoreductase, chain G, C-terminal
IPR019574 : NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding
GO :
0008137 : Molecular Function : NADH dehydrogenase (ubiquinone) activity
0016020 : Cellular Component : membrane
0016491 : Molecular Function : oxidoreductase activity
0016651 : Molecular Function : oxidoreductase activity, acting on NAD(P)H
0042773 : Biological Process : ATP synthesis coupled electron transport
0051536 : Molecular Function : iron-sulfur cluster binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 12.5, nucl 6.5, plas 3, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002769)
HIX0002769
HIT000530103 (
ENST00000432169
)
(NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial isoform 3.)
genome : 206,988,825 - 207,024,149 (35,325)
query : 1 - 2,080 (2,080/2,080)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.6.5.3
KEGG pathway :
00190 : Oxidative phosphorylation (12)
00910 : Nitrogen metabolism (50)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 12.5, nucl 6.5, plas 3, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002769)
HIX0002769
HIT000547633 (
ENST00000449699
)
(NADH-ubiquinone oxidoreductase 75 kDa subunit, mitochondrial; EC=1.6.5.3; EC=1.6.99.3; Complex I-75kD; CI-75kD; Precursor;)
genome : 206,988,825 - 207,023,918 (35,094)
query : 1 - 2,371 (2,371/2,371)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 1.6.5.3
,
EC 1.6.99.3
KEGG pathway :
00190 : Oxidative phosphorylation (12)
00910 : Nitrogen metabolism (50)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21.5, cyto_mito 13.5, cyto 4.5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002769)
HIX0023181
HIT000528558 (
ENST00000430624
)
(Cyclic AMP-responsive element-binding protein 1; CREB-1; cAMP-responsive element-binding protein 1;)
genome : 208,394,461 - 208,462,513 (68,053)
query : 1 - 2,005 (2,005/2,005)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023181)
HIX0023181
HIT000431613
(
AK312747
)
Representative transcript
(Cyclic AMP-responsive element-binding protein 1; CREB-1; cAMP-responsive element-binding protein 1;)
genome : 208,394,461 - 208,461,782 (67,322)
query : 1 - 1,172 (1,172/1,172)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001630 : cAMP response element binding (CREB) protein
IPR003102 : Coactivator CBP, pKID
IPR004827 : Basic-leucine zipper domain
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005515 : Molecular Function : protein binding
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023181)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ851654
Rattus
sp. (Rat) : BC097311
Bos
sp. (Cow) : BC142303
Pongo
sp. (Orangutan) : CR858103
Danio
sp. (Zebrafish) : ENSDART00000075632
Monodelphis
sp. (Opossum) : ENSMODT00000020288
Oryzias
sp. (Medaka) : ENSORLT00000002931
Tetraodon
sp. (Tetraodon) : GSTENT00015873001
Tetraodon
sp. (Tetraodon) : GSTENT00015879001
Mus
sp. (Mouse) : M95106
Takifugu
sp. (Fugu) : SINFRUT00000135766
Macaca
sp. (Macaque) : XM_001107192
Pan
sp. (Chimpanzee) : XM_001139842
Equus
sp. (Horse) : XM_001505120
Canis
sp. (Dog) : XM_855100
HIX0023181
HIT000201129 (
NM_004379
)
(Cyclic AMP-responsive element-binding protein 1; CREB-1; cAMP-responsive element-binding protein 1;)
genome : 208,394,616 - 208,470,283 (75,668)
query : 1 - 9,736 (9,736/9,752)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023181)
HIX0023181
HIT000212275 (
NM_134442
)
(Cyclic AMP-responsive element-binding protein 1; CREB-1; cAMP-responsive element-binding protein 1;)
genome : 208,394,616 - 208,470,283 (75,668)
query : 1 - 9,778 (9,778/9,794)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023181)
HIX0023181
HIT000530263 (
ENST00000432329
)
(Cyclic AMP-responsive element-binding protein 1; CREB-1; cAMP-responsive element-binding protein 1;)
genome : 208,394,616 - 208,468,155 (73,540)
query : 1 - 7,650 (7,650/7,650)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023181)
HIX0023181
HIT000308371 (
ENST00000353267
)
(Cyclic AMP-responsive element-binding protein 1; CREB-1; cAMP-responsive element-binding protein 1;)
genome : 208,394,636 - 208,468,155 (73,520)
query : 1 - 7,588 (7,588/7,588)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023181)
HIX0023181
HIT000519073 (
ENST00000421139
)
(Cyclic AMP-responsive element-binding protein 1; CREB-1; cAMP-responsive element-binding protein 1; Cyclic AMP-responsive DNA-binding protein;)
genome : 208,394,664 - 208,442,355 (47,692)
query : 1 - 713 (713/713)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, cyto 11.5, nucl 9.5, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023181)
HIX0023181
HIT000335200
(
BC095407
)
(Cyclic AMP-responsive element-binding protein 1; CREB-1; cAMP-responsive element-binding protein 1;)
genome : 208,394,672 - 208,463,208 (68,537)
query : 1 - 2,605 (2,605/2,622)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.999
InterPro :
IPR001630 : cAMP response element binding (CREB) protein
IPR003102 : Coactivator CBP, pKID
IPR004827 : Basic-leucine zipper domain
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005515 : Molecular Function : protein binding
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023181)
HIX0023181
HIT000321978
(
X55545
)
(Cyclic AMP-responsive element-binding protein 1; CREB-1; cAMP-responsive element-binding protein 1;)
genome : 208,394,732 - 208,461,803 (67,072)
query : 9 - 1,190 (1,182/1,266)
9 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.976)3'
coverage = 0.934
InterPro :
IPR001630 : cAMP response element binding (CREB) protein
IPR003102 : Coactivator CBP, pKID
IPR004827 : Basic-leucine zipper domain
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005515 : Molecular Function : protein binding
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023181)
HIX0023181
HIT000195183
(
M27691
)
(Cyclic AMP-responsive element-binding protein 1; CREB-1; cAMP-responsive element-binding protein 1;)
genome : 208,394,751 - 208,463,136 (68,386)
query : 1 - 2,454 (2,454/2,454)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR001630 : cAMP response element binding (CREB) protein
IPR003102 : Coactivator CBP, pKID
IPR004827 : Basic-leucine zipper domain
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005515 : Molecular Function : protein binding
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023181)
HIX0023181
HIT000035024
(
BC010636
)
(Cyclic AMP-responsive element-binding protein 1; CREB-1; cAMP-responsive element-binding protein 1;)
genome : 208,394,773 - 208,463,569 (68,797)
query : 1 - 2,905 (2,905/2,919)
9 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.997)3'
coverage = 1.000
InterPro :
IPR001630 : cAMP response element binding (CREB) protein
IPR003102 : Coactivator CBP, pKID
IPR004827 : Basic-leucine zipper domain
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005515 : Molecular Function : protein binding
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023181)
HIX0023181
HIT000493364
(
AK298740
)
(Cyclic AMP-responsive element-binding protein 1 isoform A.)
genome : 208,394,794 - 208,441,649 (46,856)
query : 1 - 1,056 (1,056/1,056)
7 exons
identity = 0.999
5'(1.000;0.992;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001630 : cAMP response element binding (CREB) protein
IPR003102 : Coactivator CBP, pKID
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005515 : Molecular Function : protein binding
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 19.5, nucl 17, cyto 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023181)
HIX0023181
HIT000635771 (
ENST00000536726
)
(Cyclic AMP-responsive element-binding protein 1 isoform A.)
genome : 208,394,794 - 208,441,649 (46,856)
query : 1 - 1,056 (1,056/1,056)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 19.5, nucl 17, cyto 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023181)
HIX0023181
HIT000252065
(
AY347527
)
(Cyclic AMP-responsive element-binding protein 1; CREB-1; cAMP-responsive element-binding protein 1;)
genome : 208,394,824 - 208,462,673 (67,850)
query : 1 - 1,627 (1,627/1,650)
8 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.985;
0.998)3'
coverage = 0.998
InterPro :
IPR003102 : Coactivator CBP, pKID
IPR004827 : Basic-leucine zipper domain
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005515 : Molecular Function : protein binding
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023181)
HIX0023181
HIT000355677 (
ENST00000374397
)
(Cyclic AMP-responsive element-binding protein 1; CREB-1; cAMP-responsive element-binding protein 1;)
genome : 208,394,824 - 208,462,675 (67,852)
query : 1 - 1,629 (1,629/1,629)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023181)
HIX0023181
HIT000434092
(
AK315226
)
(Cyclic AMP-responsive element-binding protein 1; CREB-1; cAMP-responsive element-binding protein 1;)
genome : 208,394,826 - 208,461,782 (66,957)
query : 2 - 1,026 (1,025/1,026)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.999
InterPro :
IPR001630 : cAMP response element binding (CREB) protein
IPR003102 : Coactivator CBP, pKID
IPR004827 : Basic-leucine zipper domain
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005515 : Molecular Function : protein binding
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023181)
HIX0023181
HIT000322360
(
X60003
)
(Cyclic AMP-responsive element-binding protein 1; CREB-1; cAMP-responsive element-binding protein 1;)
genome : 208,420,360 - 208,461,822 (41,463)
query : 1 - 1,024 (1,024/1,024)
7 exons
identity = 0.985
5'(0.974;1.000;1.000;0.958;0.978;1.000;0.989)3'
coverage = 1.000
InterPro :
IPR001630 : cAMP response element binding (CREB) protein
IPR003102 : Coactivator CBP, pKID
IPR004827 : Basic-leucine zipper domain
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005515 : Molecular Function : protein binding
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023181)
HIX0023181
HIT000195580
(
M34356
)
(Cyclic AMP-responsive element-binding protein 1; CREB-1; cAMP-responsive element-binding protein 1;)
genome : 208,420,360 - 208,461,782 (41,423)
query : 1 - 1,026 (1,026/1,026)
8 exons
identity = 0.999
5'(1.000;0.993;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR001630 : cAMP response element binding (CREB) protein
IPR003102 : Coactivator CBP, pKID
IPR004827 : Basic-leucine zipper domain
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005515 : Molecular Function : protein binding
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023181)
HIX0023181
HIT000266528
(
BT019509
)
(Cyclic AMP-responsive element-binding protein 1; CREB-1; cAMP-responsive element-binding protein 1;)
genome : 208,420,360 - 208,461,781 (41,422)
query : 1 - 1,025 (1,025/1,026)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.999
InterPro :
IPR001630 : cAMP response element binding (CREB) protein
IPR003102 : Coactivator CBP, pKID
IPR004827 : Basic-leucine zipper domain
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005515 : Molecular Function : protein binding
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023181)
HIX0023181
HIT000267114
(
CR407617
)
(Cyclic AMP-responsive element-binding protein 1; CREB-1; cAMP-responsive element-binding protein 1;)
genome : 208,420,360 - 208,461,779 (41,420)
query : 1 - 981 (981/981)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001630 : cAMP response element binding (CREB) protein
IPR003102 : Coactivator CBP, pKID
IPR004827 : Basic-leucine zipper domain
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005515 : Molecular Function : protein binding
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023181)
HIX0023181
HIT000496957
(
AK302333
)
(Cyclic AMP-responsive element-binding protein 1; CREB-1; cAMP-responsive element-binding protein 1;)
genome : 208,423,846 - 208,441,924 (18,079)
query : 1 - 1,029 (1,029/1,029)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001630 : cAMP response element binding (CREB) protein
IPR003102 : Coactivator CBP, pKID
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005515 : Molecular Function : protein binding
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto_nucl 10.5, cyto 9, nucl 6, E.R._mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023181)
HIX0023181
HIT000638834 (
ENST00000539789
)
(Cyclic AMP-responsive element-binding protein 1; CREB-1; cAMP-responsive element-binding protein 1;)
genome : 208,423,846 - 208,441,924 (18,079)
query : 1 - 1,029 (1,029/1,029)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto_nucl 10.5, cyto 9, nucl 6, E.R._mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023181)
HIX0023181
HIT000546211 (
ENST00000448277
)
(Cyclic AMP-responsive element-binding protein 1; CREB-1; cAMP-responsive element-binding protein 1;)
genome : 208,423,912 - 208,461,673 (37,762)
query : 1 - 829 (829/829)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023181)
HIX0023181
HIT000516015 (
ENST00000418081
)
(Cyclic AMP-responsive element-binding protein 1; CREB-1; cAMP-responsive element-binding protein 1;)
genome : 208,425,038 - 208,461,673 (36,636)
query : 1 - 893 (893/893)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 13, mito 9, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023181)
HIX0214623
pHIT000073057 ( pHIT000073057 )
(Conserved hypothetical protein.)
genome : 206,951,066 - 207,024,705 (73,640)
query : 1 - 1,959 (1,959/1,959)
15 exons
InterPro :
IPR000283 : NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site
IPR006656 : Molybdopterin oxidoreductase
IPR006963 : Molybdopterin oxidoreductase, 4Fe-4S domain
IPR010228 : NADH:ubiquinone oxidoreductase, subunit G
IPR019574 : NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding
GO :
0008137 : Molecular Function : NADH dehydrogenase (ubiquinone) activity
0016020 : Cellular Component : membrane
0016491 : Molecular Function : oxidoreductase activity
0016651 : Molecular Function : oxidoreductase activity, acting on NAD(P)H
0042773 : Biological Process : ATP synthesis coupled electron transport
0051536 : Molecular Function : iron-sulfur cluster binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214623)
CAGE tag :
H05BB55F0609,H05BE40O0102,H05BE67I1702
H08BA34O1104,H21BA13I1611
HIX0200457
pHIT000005404 ( pHIT000005404 )
Representative transcript
(Conserved hypothetical protein.)
genome : 206,980,894 - 207,024,705 (43,812)
query : 1 - 2,019 (2,019/2,019)
15 exons
InterPro :
IPR000283 : NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site
IPR002930 : Glycine cleavage system H-protein
IPR006656 : Molybdopterin oxidoreductase
IPR006963 : Molybdopterin oxidoreductase, 4Fe-4S domain
IPR010228 : NADH:ubiquinone oxidoreductase, subunit G
IPR011053 : Single hybrid motif
IPR019574 : NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding
GO :
0005960 : Cellular Component : glycine cleavage complex
0006546 : Biological Process : glycine catabolic process
0008137 : Molecular Function : NADH dehydrogenase (ubiquinone) activity
0016020 : Cellular Component : membrane
0016491 : Molecular Function : oxidoreductase activity
0016651 : Molecular Function : oxidoreductase activity, acting on NAD(P)H
0042773 : Biological Process : ATP synthesis coupled electron transport
0051536 : Molecular Function : iron-sulfur cluster binding
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200457)
CAGE tag :
H05BA28I0604,H05BA61K1211,H05BD20E0907
H05BE52J1105,H05BE57B1903
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB169174
Gallus
sp. (Chicken) : AJ720577
Mus
sp. (Mouse) : AK142711
Rattus
sp. (Rat) : AY724535
Danio
sp. (Zebrafish) : BC085651
Bos
sp. (Cow) : BC120069
Pongo
sp. (Orangutan) : CR859585
Pan
sp. (Chimpanzee) : DQ885672
Oryzias
sp. (Medaka) : ENSORLT00000007556
Takifugu
sp. (Fugu) : SINFRUT00000131791
Monodelphis
sp. (Opossum) : XM_001370787
Equus
sp. (Horse) : XM_001505117
Canis
sp. (Dog) : XM_854665
HIX0180544
pHIT000100536 ( pHIT000100536 )
Representative transcript
(Hypothetical protein.)
genome : 207,661,474 - 207,726,272 (64,799)
query : 1 - 528 (528/528)
4 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0180544)
CAGE tag :
T02F0C5BBC2E
HIX0002777
pHIT000073661 ( pHIT000073661 )
(Hypothetical protein.)
genome : 207,939,007 - 207,939,291 (285)
query : 1 - 285 (285/285)
1 exon
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002777)
CAGE tag :
H04BA16N1801,H04BA31L0707,H05BC27P0304
H37BA20I2110,H37BA39J1201
HIX0114418
pHIT000005413 ( pHIT000005413 )
Representative transcript
(Hypothetical protein.)
genome : 208,393,977 - 208,394,303 (327)
query : 1 - 327 (327/327)
1 exon
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0114418)
CAGE tag :
H04BA78H0505,H04BA93E1908,H05BA51N2308
H05BB28L0308,H05BB32K0508
HIX0002778
eHIT000014427 ( ESTsASS_2_528 )
(Non-protein coding transcript.)
genome : 208,576,366 - 208,618,870 (42,505)
query : 1 - 1,783 (1,783/1,783)
10 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002778)
ESTs used for assembly :
DA043723,BI830899,BF818623,CT000112
DA737368,DN996802,AA416803,DN992603
AC007383.4
207000001-207138712 F +
NCBI
AC017081.8
207138713-207286174 F +
NCBI
AC009225.4
207286175-207449326 F +
NCBI
AC079136.4
207449327-207455152 F +
NCBI
AC010731.3
207455153-207583769 F +
NCBI
AC008269.4
207583770-207745504 F +
NCBI
AC019052.7
207745505-207863259 F +
NCBI
AC008062.3
207863260-207994309 F +
NCBI
AC007879.4
207994310-208152950 F +
NCBI
AC009226.3
208152951-208291528 F +
NCBI
AC009298.3
208291529-208456770 F +
NCBI
AC079767.7
208456771-208543676 F +
NCBI
AC096772.3
208543677-208600000 F +
NCBI