bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0163049
HIT000545921 (
ENST00000447987
)
(Hypothetical short protein.)
genome : 103,489,798 - 103,512,180 (22,383)
query : 1 - 708 (708/708)
4 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 6, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0163049)
HIX0162667
HIT000529831 (
ENST00000431897
)
(Hypothetical short protein.)
genome : 103,583,866 - 103,600,887 (17,022)
query : 1 - 437 (437/437)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 21, extr 5, cyto 3.5, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162667)
HIX0162747
HIT000533225 (
ENST00000435291
)
(Hypothetical protein.)
genome : 103,603,781 - 103,605,023 (1,243)
query : 1 - 549 (549/549)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, extr 11, cyto_nucl 8.5, nucl 3, mito 3,
golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162747)
HIX0163202
HIT000551812 (
ENST00000453878
)
(Hypothetical short protein.)
genome : 103,628,237 - 103,636,356 (8,120)
query : 1 - 478 (478/478)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, nucl 8.5, E.R._mito 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0163202)
HIX0162442
HIT000520617 (
ENST00000422683
)
(Conserved hypothetical protein.)
genome : 103,726,217 - 103,792,718 (66,502)
query : 1 - 638 (638/638)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162442)
HIX0162714
HIT000531764 (
ENST00000433830
)
(Conserved hypothetical protein.)
genome : 103,892,362 - 103,892,596 (235)
query : 1 - 235 (235/235)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 10, cyto_nucl 10, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162714)
HIX0204076
HIT000462690_03
(
DQ596159
)
Representative transcript
(Non-protein coding transcript.)
genome : 104,019,902 - 104,019,931 (30)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
5'(0.967)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0204076)
HIX0162885
HIT000538884 (
ENST00000440950
)
(Conserved hypothetical protein.)
genome : 104,110,699 - 104,112,300 (1,602)
query : 1 - 1,284 (1,284/1,284)
2 exons
identity = 0.998
5'(1.000;0.990)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162885)
HIX0162358
HIT000516832 (
ENST00000418898
)
(Conserved hypothetical protein.)
genome : 104,144,078 - 104,145,719 (1,642)
query : 1 - 1,319 (1,319/1,319)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162358)
HIX0162241
HIT000512199 (
ENST00000414265
)
(F-actin-capping protein subunit beta family protein.)
genome : 104,240,088 - 104,240,288 (201)
query : 1 - 201 (201/201)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 8, mito 4, cyto_pero 4, cyto_plas 4,
cyto_golg 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162241)
HIX0163254
HIT000553650 (
ENST00000455716
)
(Hypothetical short protein.)
genome : 104,473,428 - 104,496,667 (23,240)
query : 1 - 580 (580/580)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 16, nucl 9.5, cyto_nucl 8.66667, cyto 4.5,
cyto_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0163254)
HIX0163044
HIT000545695 (
ENST00000447761
)
(Hypothetical protein.)
genome : 104,482,204 - 104,486,146 (3,943)
query : 1 - 545 (545/545)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, mito 10, extr 3, cyto 2, pero 2, cyto_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0163044)
HIX0203969
HIT000636537 (
ENST00000537492
)
(Hypothetical short protein.)
genome : 104,490,768 - 104,694,062 (203,295)
query : 1 - 552 (552/552)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
This sequence is too short.
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203969)
HIX0203969
HIT000643914 (
ENST00000544869
)
(Conserved hypothetical protein.)
genome : 104,490,789 - 104,694,236 (203,448)
query : 1 - 546 (546/546)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
This sequence is too short.
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203969)
HIX0030303
HIT000095062
(
BC037947
)
Representative transcript
(Conserved hypothetical protein.)
genome : 104,625,921 - 104,627,573 (1,653)
query : 2 - 1,654 (1,653/1,668)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030303)
HIX0203969
HIT000644594 (
ENST00000545549
)
(Hypothetical short protein.)
genome : 104,668,433 - 104,693,981 (25,549)
query : 1 - 575 (575/575)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
This sequence is too short.
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203969)
HIX0203969
HIT000510046 (
ENST00000412112
)
(Conserved hypothetical protein.)
genome : 104,669,960 - 104,675,714 (5,755)
query : 1 - 1,378 (1,378/1,378)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0203969)
HIX0163315
HIT000556116 (
ENST00000458182
)
(Hypothetical short protein.)
genome : 104,741,726 - 104,763,687 (21,962)
query : 1 - 529 (529/529)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto_mito 5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0163315)
HIX0162111
HIT000490878
(
AK296254
)
Representative transcript
(Conserved hypothetical protein.)
genome : 104,995,308 - 105,024,790 (29,483)
query : 9 - 1,092 (1,084/1,092)
3 exons
identity = 0.999
3'(1.000;0.992;1.000)5'
coverage = 0.993
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162111)
HIX0162111
HIT000660044 (
NR_037885
)
(Conserved hypothetical protein.)
genome : 104,995,308 - 105,024,790 (29,483)
query : 1 - 1,084 (1,084/1,084)
3 exons
identity = 0.999
3'(1.000;0.992;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 2, lyso 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162111)
HIX0162388
HIT000517987 (
ENST00000420053
)
(S-adenosyl-L-homocysteine hydrolase, NAD binding domain containing protein.)
genome : 105,011,460 - 105,012,738 (1,279)
query : 1 - 1,279 (1,279/1,279)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 10.5, cyto_nucl 8, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162388)
HIX0162289
HIT000513942 (
ENST00000416008
)
(Hypothetical short protein.)
genome : 105,027,659 - 105,032,070 (4,412)
query : 1 - 471 (471/471)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162289)
HIX0030211
HIT000036661
(
BC014368
)
Representative transcript
(Hypothetical short protein.)
genome : 105,028,610 - 105,030,489 (1,880)
query : 2 - 592 (591/621)
2 exons
identity = 0.998
3'(0.998;1.000)5'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, extr 12, cyto 4.5, cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030211)
HIX0030211
HIT000547706 (
ENST00000449772
)
(Hypothetical short protein.)
genome : 105,028,685 - 105,030,466 (1,782)
query : 1 - 493 (493/493)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, extr 12, cyto 4.5, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030211)
HIX0002336
HIT000046831
(
AK126958
)
Representative transcript
(Conserved hypothetical protein.)
genome : 105,049,725 - 105,137,290 (87,566)
query : 1 - 3,771 (3,771/3,771)
4 exons
identity = 0.998
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, nucl 11, cyto 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002336)
HIX0002336
HIT000549334 (
ENST00000451400
)
(Conserved hypothetical protein.)
genome : 105,049,725 - 105,137,290 (87,566)
query : 1 - 3,778 (3,778/3,778)
4 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 12.5, extr 10, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002336)
HIX0002336
HIT000562161 (
NR_015399
)
(Conserved hypothetical protein.)
genome : 105,050,805 - 105,129,215 (78,411)
query : 1 - 1,505 (1,505/1,524)
4 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 10.5, mito 8, extr 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002336)
HIX0002336
HIT000011704
(
AK055090
)
(Conserved hypothetical protein.)
genome : 105,050,820 - 105,124,289 (73,470)
query : 1 - 2,128 (2,128/2,128)
2 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, plas 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002336)
HIX0002336
HIT000527398 (
ENST00000429464
)
(Conserved hypothetical protein.)
genome : 105,050,820 - 105,124,289 (73,470)
query : 1 - 2,128 (2,128/2,128)
2 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002336)
HIX0002336
HIT000512376 (
ENST00000414442
)
(Hypothetical short protein.)
genome : 105,050,824 - 105,122,563 (71,740)
query : 1 - 578 (578/578)
3 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23.5, mito_nucl 14.3333, nucl 4,
cyto_nucl 3.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002336)
HIX0002336
HIT000025801
(
AL137513
)
(Conserved hypothetical protein.)
genome : 105,050,836 - 105,129,215 (78,380)
query : 1 - 1,473 (1,473/1,492)
4 exons
identity = 0.999
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002336)
HIX0002336
HIT000545314 (
ENST00000447380
)
(Conserved hypothetical protein.)
genome : 105,050,836 - 105,129,215 (78,380)
query : 1 - 1,474 (1,474/1,474)
4 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 10.5, mito 8, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002336)
HIX0002336
HIT000386446
(
BC105699
)
(Conserved hypothetical protein.)
genome : 105,050,911 - 105,129,165 (78,255)
query : 1 - 1,349 (1,349/1,349)
4 exons
identity = 0.999
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 10.5, mito 8, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002336)
HIX0002336
HIT000386447
(
BC105700
)
(Conserved hypothetical protein.)
genome : 105,050,911 - 105,129,165 (78,255)
query : 1 - 1,350 (1,350/1,350)
4 exons
identity = 0.999
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 13, cyto_nucl 8, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002336)
HIX0002336
HIT000386448
(
BC105701
)
(Conserved hypothetical protein.)
genome : 105,050,911 - 105,129,165 (78,255)
query : 1 - 1,349 (1,349/1,349)
4 exons
identity = 0.999
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 10.5, mito 8, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002336)
HIX0002336
HIT000386449
(
BC105702
)
(Conserved hypothetical protein.)
genome : 105,050,911 - 105,129,165 (78,255)
query : 1 - 1,349 (1,349/1,349)
4 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 10.5, mito 8, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002336)
AC007251.4
103500001-103525498 F +
NCBI
AC108051.3
103525499-103643373 F +
NCBI
AC073987.4
103643374-103793724 F +
NCBI
AC010881.8
103793725-103968451 F +
NCBI
AC011593.8
103968452-104096800 F +
NCBI
AC092568.2
104096801-104126734 F +
NCBI
AC018880.6
104126735-104253559 F +
NCBI
AC021015.4
104253560-104402556 F +
NCBI
AC096548.1
104402557-104451897 F +
NCBI
AC013727.7
104451898-104615419 F +
NCBI
AC096554.1
104615420-104758115 F +
NCBI
AC097723.5
104758116-104844734 F +
NCBI
AC105926.5
104844735-104938172 F +
NCBI
AC068535.7
104938173-105100000 F +
NCBI