bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0214732
HIT000507269 (
ENST00000409236
)
(AF4/FMR2 family member 3; Lymphoid nuclear protein related to AF4; Protein LAF-4;)
genome : 100,167,816 - 100,721,178 (553,363)
query : 1 - 3,914 (3,914/3,914)
23 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214732)
HIX0214732
HIT000219379
(
U34360
)
(AF4/FMR2 family member 3; Lymphoid nuclear protein related to AF4; Protein LAF-4;)
genome : 100,167,816 - 100,720,968 (553,153)
query : 3 - 3,857 (3,855/3,857)
22 exons
identity = 0.997
3'(1.000;0.994;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR007797 : Transcription factor AF4/FMR2
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214732)
HIX0214732
HIT000500591
(
BC136579
)
(AF4/FMR2 family member 3; Lymphoid nuclear protein related to AF4; Protein LAF-4;)
genome : 100,167,894 - 100,720,935 (553,042)
query : 1 - 3,742 (3,742/3,742)
22 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007797 : Transcription factor AF4/FMR2
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214732)
HIX0214732
HIT000502692
(
BC144266
)
Representative transcript
(AF4/FMR2 family member 3 isoform 1.)
genome : 100,167,894 - 100,720,935 (553,042)
query : 1 - 3,817 (3,817/3,817)
23 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007797 : Transcription factor AF4/FMR2
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 17, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214732)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC052061
Bos
sp. (Cow) : BC151764
Pongo
sp. (Orangutan) : ENSPPYT00000014036
Macaca
sp. (Macaque) : XM_001104149
Pan
sp. (Chimpanzee) : XM_001160919
Monodelphis
sp. (Opossum) : XM_001369003
Equus
sp. (Horse) : XM_001492324
Rattus
sp. (Rat) : XM_343559
Danio
sp. (Zebrafish) : XM_693665
Canis
sp. (Dog) : XM_849267
HIX0214732
HIT000423265
(
AK290468
)
(AF4/FMR2 family member 3 isoform 2.)
genome : 100,203,616 - 100,721,159 (517,544)
query : 1 - 2,685 (2,685/2,701)
14 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000)5'
coverage = 0.994
InterPro :
IPR007797 : Transcription factor AF4/FMR2
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214732)
HIX0214732
HIT000528723 (
ENST00000430789
)
(AF4/FMR2 family member 3; Lymphoid nuclear protein related to AF4; Protein LAF-4;)
genome : 100,247,040 - 100,623,307 (376,268)
query : 1 - 730 (730/730)
9 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 11, mito 6, cyto 5.5, extr 3,
E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214732)
HIX0002314
HIT000005471
(
AK022197
)
Representative transcript
(Hypothetical short protein.)
genome : 100,513,115 - 100,515,470 (2,356)
query : 1 - 2,356 (2,356/2,356)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 14, extr 6, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002314)
HIX0002315
HIT000005523
(
AK022249
)
Representative transcript
(Conserved hypothetical protein.)
genome : 100,593,276 - 100,595,103 (1,828)
query : 1 - 1,828 (1,828/1,828)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_mito 9.33333, cyto 9, mito 9, cyto_nucl 9,
extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002315)
HIX0214732
HIT000601328 (
ENST00000498090
)
(AF4/FMR2 family member 3; Lymphoid nuclear protein related to AF4; Protein LAF-4;)
genome : 100,622,611 - 100,624,413 (1,803)
query : 1 - 1,673 (1,673/1,673)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 10, cyto_nucl 8.5, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214732)
HIX0214732
HIT000529971 (
ENST00000432037
)
(AF4/FMR2 family member 3; Lymphoid nuclear protein related to AF4; Protein LAF-4;)
genome : 100,623,614 - 100,720,992 (97,379)
query : 1 - 559 (559/559)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 14, cyto 8.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214732)
HIX0030328
HIT000096048
(
BC040181
)
Representative transcript
(Conserved hypothetical protein.)
genome : 100,721,381 - 100,723,966 (2,586)
query : 6 - 2,591 (2,586/2,611)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 9.5, cyto_nucl 8.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030328)
HIX0214984
HIT000532235 (
ENST00000434301
)
(Conserved hypothetical protein.)
genome : 100,721,381 - 100,723,966 (2,586)
query : 1 - 2,586 (2,586/2,586)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 11.1667, mito 8, cyto 4,
E.R._mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214984)
HIX0215036
HIT000587481 (
ENST00000483600
)
(Conserved hypothetical protein.)
genome : 100,726,307 - 100,759,201 (32,895)
query : 1 - 852 (852/852)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 13.5, cyto_nucl 10, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215036)
HIX0002316
HIT000013254
(
AK056640
)
Representative transcript
(Conserved hypothetical protein.)
genome : 100,824,716 - 100,867,946 (43,231)
query : 1 - 3,111 (3,111/3,111)
3 exons
identity = 0.998
5'(1.000;1.000;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 14, cyto 8, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002316)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : XM_001161051
HIX0002316
HIT000550288 (
ENST00000452354
)
(Conserved hypothetical protein.)
genome : 100,824,716 - 100,867,946 (43,231)
query : 1 - 3,115 (3,115/3,115)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002316)
HIX0002316
HIT000338107
(
BC105019
)
(Hypothetical protein.)
genome : 100,825,112 - 100,865,566 (40,455)
query : 1 - 339 (339/339)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 14, cyto 8, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002316)
HIX0002316
HIT000338105
(
BC105017
)
(Hypothetical protein.)
genome : 100,825,112 - 100,865,557 (40,446)
query : 1 - 330 (330/330)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 14, cyto 8, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002316)
HIX0002316
HIT000538970 (
ENST00000441036
)
(Conserved hypothetical protein.)
genome : 100,859,093 - 100,865,724 (6,632)
query : 1 - 581 (581/581)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 7.5, cyto_nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002316)
HIX0024130
HIT000319345 (
NM_198461
)
(LON peptidase N-terminal domain and RING finger protein 2; Neuroblastoma apoptosis-related protease; RING finger protein 192;)
genome : 100,889,753 - 100,939,195 (49,443)
query : 1 - 13,912 (13,912/13,920)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024130)
HIX0024130
HIT000476890 (
ENST00000393437
)
(LON peptidase N-terminal domain and RING finger protein 2; Neuroblastoma apoptosis-related protease; RING finger protein 192;)
genome : 100,889,753 - 100,939,195 (49,443)
query : 1 - 13,912 (13,912/13,912)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024130)
HIX0024130
HIT000306772
(
CR749844
)
(Conserved hypothetical protein.)
genome : 100,889,911 - 100,898,479 (8,569)
query : 1 - 6,689 (6,689/6,794)
2 exons
identity = 0.994
3'(0.998;0.993)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 1, cyto 1, mito 1, cyto_nucl 1, lyso 1,
cyto_mito 1, mito_nucl 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024130)
HIX0002317
HIT000043709
(
AK123836
)
(Hypothetical protein.)
genome : 100,889,851 - 100,893,446 (3,596)
query : 1 - 3,596 (3,596/3,596)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 14.5, cyto 12.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002317)
HIX0024130
HIT000026139
(
AL157505
)
(Conserved hypothetical protein.)
genome : 100,889,876 - 100,891,886 (2,011)
query : 13 - 2,023 (2,011/2,039)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024130)
HIX0002317
HIT000044612
(
AK124739
)
Representative transcript
(Conserved hypothetical protein.)
genome : 100,889,880 - 100,894,587 (4,708)
query : 1 - 4,708 (4,708/4,708)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 14.5, cyto 12.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002317)
HIX0024130
HIT000048588
(
AK128715
)
(Conserved hypothetical protein.)
genome : 100,889,884 - 100,895,323 (5,440)
query : 1 - 5,440 (5,440/5,440)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024130)
HIX0024130
HIT000341001
(
DQ020495
)
Representative transcript
(LON peptidase N-terminal domain and RING finger protein 2; Neuroblastoma apoptosis-related protease; RING finger protein 192;)
genome : 100,889,910 - 100,939,195 (49,286)
query : 1 - 11,823 (11,823/11,823)
14 exons
identity = 0.995
3'(0.998;0.992;0.997;0.993;1.000;1.000;1.000;
1.000;0.989;0.990;0.993;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003111 : Peptidase S16, lon N-terminal
IPR011990 : Tetratricopeptide-like helical domain
IPR013026 : Tetratricopeptide repeat-containing domain
IPR015947 : PUA-like domain
IPR017907 : Zinc finger, RING-type, conserved site
IPR019734 : Tetratricopeptide repeat
GO :
0004176 : Molecular Function : ATP-dependent peptidase activity
0005515 : Molecular Function : protein binding
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024130)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : CR390867
Bos
sp. (Cow) : ENSBTAT00000005666
Oryzias
sp. (Medaka) : ENSORLT00000011656
Pongo
sp. (Orangutan) : ENSPPYT00000014037
Tetraodon
sp. (Tetraodon) : GSTENT00029187001
Takifugu
sp. (Fugu) : SINFRUT00000155826
Rattus
sp. (Rat) : XM_001058206
Macaca
sp. (Macaque) : XM_001104504
Monodelphis
sp. (Opossum) : XM_001369202
Canis
sp. (Dog) : XM_538457
Pan
sp. (Chimpanzee) : XR_024009
HIX0002317
HIT000018901
(
AK094044
)
(Conserved hypothetical protein.)
genome : 100,889,912 - 100,892,743 (2,832)
query : 1 - 2,832 (2,832/2,832)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 14.5, cyto 12.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002317)
HIX0002317
HIT000012987
(
AK056373
)
(Hypothetical protein.)
genome : 100,889,912 - 100,892,000 (2,089)
query : 1 - 2,089 (2,089/2,089)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 14.5, cyto 12.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002317)
HIX0024130
HIT000047079
(
AK127206
)
(LON peptidase N-terminal domain and RING finger protein 2.)
genome : 100,900,004 - 100,925,698 (25,695)
query : 10 - 2,365 (2,356/2,365)
11 exons
identity = 0.995
3'(0.996;1.000;1.000;1.000;1.000;1.000;0.989;
0.990;0.993;1.000;0.977)5'
coverage = 0.996
InterPro :
IPR003111 : Peptidase S16, lon N-terminal
IPR011990 : Tetratricopeptide-like helical domain
IPR013026 : Tetratricopeptide repeat-containing domain
IPR015947 : PUA-like domain
IPR017907 : Zinc finger, RING-type, conserved site
GO :
0004176 : Molecular Function : ATP-dependent peptidase activity
0005515 : Molecular Function : protein binding
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024130)
HIX0024130
HIT000507676 (
ENST00000409647
)
(LON peptidase N-terminal domain and RING finger protein 2.)
genome : 100,900,004 - 100,925,698 (25,695)
query : 10 - 2,363 (2,354/2,363)
11 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.977)5'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024130)
HIX0024130
HIT000501925
(
BC143471
)
(LON peptidase N-terminal domain and RING finger protein 2.)
genome : 100,900,688 - 100,925,665 (24,978)
query : 1 - 1,541 (1,541/1,541)
10 exons
identity = 0.999
3'(1.000;0.993;1.000;1.000;1.000;1.000;0.995;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003111 : Peptidase S16, lon N-terminal
IPR015947 : PUA-like domain
IPR017907 : Zinc finger, RING-type, conserved site
GO :
0004176 : Molecular Function : ATP-dependent peptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024130)
HIX0024130
HIT000337021
(
BC101664
)
(LON peptidase N-terminal domain and RING finger protein 2.)
genome : 100,900,693 - 100,925,665 (24,973)
query : 1 - 1,631 (1,631/1,631)
11 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.989;
0.995;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003111 : Peptidase S16, lon N-terminal
IPR011990 : Tetratricopeptide-like helical domain
IPR013026 : Tetratricopeptide repeat-containing domain
IPR015947 : PUA-like domain
IPR017907 : Zinc finger, RING-type, conserved site
GO :
0004176 : Molecular Function : ATP-dependent peptidase activity
0005515 : Molecular Function : protein binding
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024130)
HIX0024130
HIT000501922
(
BC143468
)
(LON peptidase N-terminal domain and RING finger protein 2.)
genome : 100,900,696 - 100,925,665 (24,970)
query : 1 - 1,628 (1,628/1,628)
11 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.989;
0.995;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003111 : Peptidase S16, lon N-terminal
IPR011990 : Tetratricopeptide-like helical domain
IPR013026 : Tetratricopeptide repeat-containing domain
IPR015947 : PUA-like domain
IPR017907 : Zinc finger, RING-type, conserved site
GO :
0004176 : Molecular Function : ATP-dependent peptidase activity
0005515 : Molecular Function : protein binding
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024130)
HIX0024130
HIT000337019
(
BC101662
)
(LON peptidase N-terminal domain and RING finger protein 2.)
genome : 100,900,697 - 100,925,665 (24,969)
query : 1 - 1,627 (1,627/1,627)
11 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.989;
0.990;0.993;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003111 : Peptidase S16, lon N-terminal
IPR011990 : Tetratricopeptide-like helical domain
IPR013026 : Tetratricopeptide repeat-containing domain
IPR015947 : PUA-like domain
IPR017907 : Zinc finger, RING-type, conserved site
GO :
0004176 : Molecular Function : ATP-dependent peptidase activity
0005515 : Molecular Function : protein binding
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024130)
HIX0215116
HIT000706881 (
ENST00000595083
)
(Cytochrome c, class IA/ IB family protein.)
genome : 100,986,705 - 100,987,007 (303)
query : 1 - 303 (303/303)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, cyto 2.5, cyto_nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215116)
HIX0002318
HIT000063130
(
AF033827
)
Representative transcript
(Carbohydrate sulfotransferase 10; EC=2.8.2.-; HNK-1 sulfotransferase; HNK-1ST; HNK1ST; HuHNK-1ST;)
genome : 101,008,329 - 101,034,118 (25,790)
query : 1 - 2,835 (2,835/2,877)
7 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;0.986;1.000)5'
coverage = 1.000
EC number :
EC 2.8.2.-
InterPro :
IPR005331 : Sulfotransferase
IPR018011 : Carbohydrate sulfotransferase-related
GO :
0008146 : Molecular Function : sulfotransferase activity
0016021 : Cellular Component : integral component of membrane
0016051 : Biological Process : carbohydrate biosynthetic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, E.R. 4, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002318)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AF022729
Gallus
sp. (Chicken) : AJ720840
Mus
sp. (Mouse) : AK046415
Danio
sp. (Zebrafish) : BC079482
Bos
sp. (Cow) : BC140479
Pongo
sp. (Orangutan) : CR858486
Equus
sp. (Horse) : ENSECAT00000018844
Oryzias
sp. (Medaka) : ENSORLT00000006517
Tetraodon
sp. (Tetraodon) : GSTENT00027141001
Takifugu
sp. (Fugu) : SINFRUT00000136453
Macaca
sp. (Macaque) : XM_001104732
Monodelphis
sp. (Opossum) : XM_001363765
Pan
sp. (Chimpanzee) : XM_515653
Canis
sp. (Dog) : XM_531783
HIX0002318
HIT000201584 (
NM_004854
)
(Carbohydrate sulfotransferase 10; EC=2.8.2.-; HNK-1 sulfotransferase; HNK-1ST; HNK1ST; HuHNK-1ST;)
genome : 101,008,322 - 101,034,130 (25,809)
query : 1 - 2,854 (2,854/2,872)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.8.2.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, E.R. 4, pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002318)
HIX0002318
HIT000065761
(
AF070594
)
(Carbohydrate sulfotransferase 10; EC=2.8.2.-; HNK-1 sulfotransferase; HNK-1ST; HNK1ST; HuHNK-1ST;)
genome : 101,008,322 - 101,031,544 (23,223)
query : 1 - 2,530 (2,530/2,548)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.8.2.-
InterPro :
IPR005331 : Sulfotransferase
IPR018011 : Carbohydrate sulfotransferase-related
GO :
0008146 : Molecular Function : sulfotransferase activity
0016021 : Cellular Component : integral component of membrane
0016051 : Biological Process : carbohydrate biosynthetic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, E.R. 4, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002318)
HIX0002318
HIT000034946
(
BC010441
)
(Carbohydrate sulfotransferase 10; EC=2.8.2.-; HNK-1 sulfotransferase; HNK-1ST; HNK1ST; HuHNK-1ST;)
genome : 101,008,322 - 101,034,071 (25,750)
query : 1 - 2,795 (2,795/2,808)
7 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;0.986;1.000)5'
coverage = 1.000
EC number :
EC 2.8.2.-
InterPro :
IPR005331 : Sulfotransferase
IPR018011 : Carbohydrate sulfotransferase-related
GO :
0008146 : Molecular Function : sulfotransferase activity
0016021 : Cellular Component : integral component of membrane
0016051 : Biological Process : carbohydrate biosynthetic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, E.R. 4, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002318)
HIX0002318
HIT000109244 (
ENST00000264249
)
(Carbohydrate sulfotransferase 10; EC=2.8.2.-; HNK-1 sulfotransferase; HNK-1ST; HNK1ST; HuHNK-1ST;)
genome : 101,008,327 - 101,034,118 (25,792)
query : 1 - 2,837 (2,837/2,837)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.8.2.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, E.R. 4, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002318)
HIX0002318
HIT000491891
(
AK297267
)
(Carbohydrate sulfotransferase 10; EC=2.8.2.-; HNK-1 sulfotransferase; HNK-1ST; HNK1ST; HuHNK-1ST;)
genome : 101,009,604 - 101,033,649 (24,046)
query : 1 - 1,476 (1,476/1,476)
7 exons
identity = 0.998
3'(0.998;1.000;0.996;1.000;1.000;0.986;1.000)5'
coverage = 1.000
EC number :
EC 2.8.2.-
InterPro :
IPR005331 : Sulfotransferase
IPR018011 : Carbohydrate sulfotransferase-related
GO :
0008146 : Molecular Function : sulfotransferase activity
0016021 : Cellular Component : integral component of membrane
0016051 : Biological Process : carbohydrate biosynthetic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 21, cyto 3.5, cyto_nucl 3.5, E.R. 3, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002318)
HIX0002318
HIT000641662 (
ENST00000542617
)
(Carbohydrate sulfotransferase 10; EC=2.8.2.-; HNK-1 sulfotransferase; HNK-1ST; HNK1ST; HuHNK-1ST;)
genome : 101,009,604 - 101,033,649 (24,046)
query : 1 - 1,476 (1,476/1,476)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.8.2.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 19, cyto 4.5, mito 4, E.R. 4, E.R._mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002318)
HIX0002318
HIT000432107
(
AK313241
)
(Carbohydrate sulfotransferase 10; EC=2.8.2.-; HNK-1 sulfotransferase; HNK-1ST; HNK1ST; HuHNK-1ST;)
genome : 101,009,707 - 101,033,473 (23,767)
query : 1 - 1,338 (1,338/1,338)
7 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;0.986;1.000)5'
coverage = 1.000
EC number :
EC 2.8.2.-
InterPro :
IPR005331 : Sulfotransferase
IPR018011 : Carbohydrate sulfotransferase-related
GO :
0008146 : Molecular Function : sulfotransferase activity
0016021 : Cellular Component : integral component of membrane
0016051 : Biological Process : carbohydrate biosynthetic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, E.R. 4, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002318)
HIX0002318
HIT000507727 (
ENST00000409701
)
(Carbohydrate sulfotransferase 10; EC=2.8.2.-; HNK-1 sulfotransferase; HNK-1ST; HNK1ST; HuHNK-1ST;)
genome : 101,009,707 - 101,033,473 (23,767)
query : 1 - 1,338 (1,338/1,338)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.8.2.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, E.R. 4, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002318)
HIX0002318
HIT000588237 (
ENST00000484382
)
(Carbohydrate sulfotransferase 10; EC=2.8.2.-; HNK-1 sulfotransferase; HNK-1ST; HNK1ST; HuHNK-1ST;)
genome : 101,014,370 - 101,033,916 (19,547)
query : 1 - 519 (519/519)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.8.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, extr 12, nucl 3, mito 3, mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002318)
HIX0002318
HIT000507082 (
ENST00000409046
)
(Carbohydrate sulfotransferase 10; EC=2.8.2.-; HNK-1 sulfotransferase; HNK-1ST; HNK1ST; HuHNK-1ST;)
genome : 101,014,373 - 101,033,796 (19,424)
query : 1 - 604 (604/604)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.8.2.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002318)
HIX0002318
HIT000518792 (
ENST00000420858
)
(Carbohydrate sulfotransferase 10; EC=2.8.2.-; HNK-1 sulfotransferase; HNK-1ST; HNK1ST; HuHNK-1ST;)
genome : 101,014,398 - 101,032,307 (17,910)
query : 1 - 574 (574/574)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.8.2.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002318)
HIX0002318
HIT000546923 (
ENST00000448989
)
(Carbohydrate sulfotransferase 10; EC=2.8.2.-; HNK-1 sulfotransferase; HNK-1ST; HNK1ST; HuHNK-1ST;)
genome : 101,014,514 - 101,033,649 (19,136)
query : 1 - 585 (585/585)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.8.2.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 10, mito 9, cyto 5.5, cyto_nucl 4, E.R. 3,
extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002318)
HIX0002318
HIT000519408 (
ENST00000421474
)
(Carbohydrate sulfotransferase 10; EC=2.8.2.-; HNK-1 sulfotransferase; HNK-1ST; HNK1ST; HuHNK-1ST;)
genome : 101,014,542 - 101,033,802 (19,261)
query : 1 - 559 (559/559)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.8.2.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002318)
HIX0002319
HIT000004743
(
AK021469
)
Representative transcript
(Conserved hypothetical protein.)
genome : 101,015,582 - 101,017,024 (1,443)
query : 1 - 1,443 (1,443/1,443)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 7.16667, nucl 6.5, cyto 4.5,
cyto_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002319)
HIX0002318
HIT000516135 (
ENST00000418201
)
(Carbohydrate sulfotransferase 10; EC=2.8.2.-; HNK-1 sulfotransferase; HNK-1ST; HNK1ST; HuHNK-1ST;)
genome : 101,019,026 - 101,033,813 (14,788)
query : 1 - 692 (692/692)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.8.2.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002318)
HIX0002318
HIT000533894 (
ENST00000435960
)
(Carbohydrate sulfotransferase 10; EC=2.8.2.-; HNK-1 sulfotransferase; HNK-1ST; HNK1ST; HuHNK-1ST;)
genome : 101,023,038 - 101,033,841 (10,804)
query : 1 - 673 (673/673)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.8.2.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 11, cyto 8, extr 4, E.R. 3, mito 2, E.R._golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002318)
HIX0002318
HIT000588908 (
ENST00000485085
)
(Non-protein coding transcript.)
genome : 101,024,135 - 101,034,076 (9,942)
query : 1 - 564 (564/564)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002318)
HIX0002318
HIT000591545 (
ENST00000487860
)
(Conserved hypothetical protein.)
genome : 101,024,636 - 101,033,873 (9,238)
query : 1 - 596 (596/596)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002318)
HIX0002318
HIT000571227 (
ENST00000466583
)
(Conserved hypothetical protein.)
genome : 101,031,515 - 101,033,717 (2,203)
query : 1 - 487 (487/487)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 13, extr 5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002318)
HIX0163187
HIT000551186 (
ENST00000453252
)
(Rho GTPase-activating protein domain containing protein.)
genome : 101,041,810 - 101,042,569 (760)
query : 1 - 760 (760/760)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, nucl 4, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0163187)
HIX0029788
HIT000242473
(
AB164464
)
Representative transcript
(Neuromedin-S; Precursor;)
genome : 101,086,944 - 101,099,742 (12,799)
query : 1 - 485 (485/485)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR018070 : Neuromedin U, amidation site
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029788)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AB164466
Bos
sp. (Cow) : BC120470
Canis
sp. (Dog) : ENSCAFT00000035636
Pongo
sp. (Orangutan) : ENSPPYT00000014039
Rattus
sp. (Rat) : ENSRNOT00000059587
Macaca
sp. (Macaque) : XM_001105196
Pan
sp. (Chimpanzee) : XM_001161586
HIX0029788
HIT000316837 (
NM_001011717
)
(Neuromedin-S; Precursor;)
genome : 101,086,944 - 101,099,742 (12,799)
query : 1 - 485 (485/485)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029788)
HIX0029788
HIT000358145 (
ENST00000376865
)
(Neuromedin-S; Precursor;)
genome : 101,086,944 - 101,099,742 (12,799)
query : 1 - 485 (485/485)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0029788)
HIX0057640
HIT000634190 (
ENST00000535145
)
(Endosulphine family protein.)
genome : 101,125,739 - 101,126,077 (339)
query : 1 - 339 (339/339)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 16, extr 7, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057640)
HIX0057640
HIT000358136 (
ENST00000376856
)
(Endosulphine family protein.)
genome : 101,125,739 - 101,126,074 (336)
query : 1 - 336 (336/336)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 16, extr 7, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0057640)
HIX0002320
HIT000109245 (
ENST00000264254
)
(Phosducin-like protein 3; HTPHLP; PhPL3; Viral IAP-associated factor 1; VIAF-1;)
genome : 101,179,152 - 101,193,197 (14,046)
query : 1 - 1,337 (1,337/1,337)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 13.8333, cyto_pero 10.3333,
nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002320)
HIX0002320
HIT000432851
(
AK313985
)
Representative transcript
(Phosducin-like protein 3; HTPHLP; PhPL3; Viral IAP-associated factor 1; VIAF-1;)
genome : 101,179,152 - 101,192,958 (13,807)
query : 1 - 1,098 (1,098/1,098)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006442 : Type II toxin-antitoxin system, antitoxin Phd/YefM
IPR012336 : Thioredoxin-like fold
IPR024253 : Phosducin, thioredoxin-like domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 13.8333, cyto_pero 10.3333,
nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002320)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ719844
Mus
sp. (Mouse) : AK078372
Rattus
sp. (Rat) : BC099162
Bos
sp. (Cow) : BC119960
Canis
sp. (Dog) : ENSCAFT00000035733
Oryzias
sp. (Medaka) : ENSORLT00000011694
Pongo
sp. (Orangutan) : ENSPPYT00000014040
Takifugu
sp. (Fugu) : SINFRUT00000133140
Macaca
sp. (Macaque) : XM_001105373
Monodelphis
sp. (Opossum) : XM_001369460
Equus
sp. (Horse) : XM_001491992
Pan
sp. (Chimpanzee) : XM_525834
HIX0002320
HIT000209096 (
NM_024065
)
(Phosducin-like protein 3; HTPHLP; PhPL3; Viral IAP-associated factor 1; VIAF-1;)
genome : 101,179,418 - 101,193,201 (13,784)
query : 1 - 1,075 (1,075/1,086)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 13.8333, cyto_pero 10.3333,
nucl 8.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002320)
HIX0002320
HIT000030074
(
BC001021
)
(Phosducin-like protein 3; HTPHLP; PhPL3; Viral IAP-associated factor 1; VIAF-1;)
genome : 101,179,439 - 101,193,164 (13,726)
query : 1 - 1,017 (1,017/1,035)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006442 : Type II toxin-antitoxin system, antitoxin Phd/YefM
IPR012336 : Thioredoxin-like fold
IPR024253 : Phosducin, thioredoxin-like domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 13.8333, cyto_pero 10.3333,
nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002320)
HIX0002320
HIT000495451
(
AK300827
)
(Phosducin-like protein 3.)
genome : 101,179,463 - 101,193,296 (13,834)
query : 1 - 1,058 (1,058/1,058)
6 exons
identity = 0.996
5'(1.000;1.000;0.982;0.993;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR006442 : Type II toxin-antitoxin system, antitoxin Phd/YefM
IPR012336 : Thioredoxin-like fold
IPR024253 : Phosducin, thioredoxin-like domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 14.3333, cyto_pero 10.1667,
nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002320)
HIX0002320
HIT000002435
(
AF267853
)
(Phosducin-like protein 3; HTPHLP; PhPL3; Viral IAP-associated factor 1; VIAF-1;)
genome : 101,179,478 - 101,193,195 (13,718)
query : 13 - 1,021 (1,009/1,058)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;0.993;1.000;1.000)3'
coverage = 0.988
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 13.8333, cyto_pero 10.3333,
nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002320)
HIX0002320
HIT000069664
(
AF110511
)
(Phosducin-like protein 3; HTPHLP; PhPL3; Viral IAP-associated factor 1; VIAF-1;)
genome : 101,179,478 - 101,193,194 (13,717)
query : 10 - 1,016 (1,007/1,016)
6 exons
identity = 0.997
5'(0.983;1.000;1.000;0.993;1.000;0.997)3'
coverage = 0.999
InterPro :
IPR006442 : Type II toxin-antitoxin system, antitoxin Phd/YefM
IPR012336 : Thioredoxin-like fold
IPR024253 : Phosducin, thioredoxin-like domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 13.8333, cyto_pero 10.3333,
nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002320)
HIX0002320
HIT000514189 (
ENST00000416255
)
(Phosducin-like protein 3.)
genome : 101,179,720 - 101,188,094 (8,375)
query : 1 - 657 (657/657)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, nucl 10, cyto_mito 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002320)
HIX0002320
HIT000481261_02 (
ENST00000398028
)
(Phosducin-like protein 3.)
genome : 101,182,963 - 101,192,958 (9,996)
query : 5 - 722 (718/722)
5 exons
identity = 0.972
5'(0.946;0.967;0.965;0.990;0.979)3'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 16.5, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002320)
HIX0002320
HIT000593218_01 (
ENST00000489621
)
(Phosducin-like protein 3.)
genome : 101,182,963 - 101,192,958 (9,996)
query : 5 - 720 (716/720)
5 exons
identity = 0.971
5'(0.985;0.978;0.965;0.986;0.937)3'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 13.5, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002320)
HIX0002320
HIT000548061 (
ENST00000450127
)
(Phosducin-like protein 3.)
genome : 101,185,417 - 101,188,502 (3,086)
query : 1 - 662 (662/662)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 14.5, nucl 9.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002320)
HIX0162554
HIT000525522 (
ENST00000427588
)
(High mobility group nucleosome-binding domain-containing family protein.)
genome : 101,207,612 - 101,207,786 (175)
query : 1 - 175 (175/175)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162554)
HIX0162250
HIT000512581 (
ENST00000414647
)
(Hypothetical short protein.)
genome : 101,223,490 - 101,225,813 (2,324)
query : 1 - 517 (517/517)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, nucl 3, cyto 3, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162250)
HIX0162250
HIT000522276 (
ENST00000424342
)
(Hypothetical short protein.)
genome : 101,223,706 - 101,225,820 (2,115)
query : 1 - 438 (438/438)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, extr 12, nucl 10, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162250)
HIX0163064
HIT000546378 (
ENST00000448444
)
(Conserved hypothetical protein.)
genome : 101,276,674 - 101,277,087 (414)
query : 1 - 414 (414/414)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, cyto 11, extr 5, plas 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0163064)
HIX0162261
HIT000512899 (
ENST00000414965
)
(Hypothetical short protein.)
genome : 101,286,354 - 101,292,500 (6,147)
query : 1 - 562 (562/562)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto_nucl 7, nucl 6.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162261)
HIX0162930
HIT000540964 (
ENST00000443030
)
(Non-protein coding transcript.)
genome : 101,338,683 - 101,339,344 (662)
query : 1 - 236 (236/236)
2 exons
identity = 0.970
3'(1.000;0.904)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162930)
HIX0200274
HIT000199411 (
NM_002518
)
(Neuronal PAS domain-containing protein 2; Neuronal PAS2; Basic-helix-loop-helix-PAS protein MOP4; Class E basic helix-loop-helix protein 9; bHLHe9; Member of PAS protein 4; PAS domain-containing protein 4;)
genome : 101,436,613 - 101,613,287 (176,675)
query : 1 - 4,004 (4,004/4,004)
21 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.992;0.952;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 17.5, cyto 13
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200274)
HIX0200274
HIT000221400
(
U77970
)
(Neuronal PAS domain-containing protein 2; Neuronal PAS2; Basic-helix-loop-helix-PAS protein MOP4; Class E basic helix-loop-helix protein 9; bHLHe9; Member of PAS protein 4; PAS domain-containing protein 4;)
genome : 101,436,613 - 101,612,163 (175,551)
query : 1 - 2,880 (2,880/2,880)
21 exons
identity = 0.996
5'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
0.984;0.952;1.000;0.993;1.000;0.993;1.000;
0.989;1.000;0.995;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000014 : PAS domain
IPR001067 : Nuclear translocator
IPR001610 : PAC motif
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
IPR013767 : PAS fold
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0004871 : Molecular Function : signal transducer activity
0005634 : Cellular Component : nucleus
0005667 : Cellular Component : transcription factor complex
0005737 : Cellular Component : cytoplasm
0006355 : Biological Process : regulation of transcription, DNA-templated
0007165 : Biological Process : signal transduction
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 18, cyto 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200274)
HIX0200274
HIT000129755 (
ENST00000335681
)
(Neuronal PAS domain-containing protein 2; Neuronal PAS2; Basic-helix-loop-helix-PAS protein MOP4; Class E basic helix-loop-helix protein 9; bHLHe9; Member of PAS protein 4; PAS domain-containing protein 4;)
genome : 101,436,614 - 101,613,291 (176,678)
query : 1 - 4,007 (4,007/4,007)
21 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.992;0.952;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 17.5, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200274)
HIX0200274
HIT000264828
(
BC072383
)
(Neuronal PAS domain-containing protein 2; Neuronal PAS2; Basic-helix-loop-helix-PAS protein MOP4; Class E basic helix-loop-helix protein 9; bHLHe9; Member of PAS protein 4; PAS domain-containing protein 4;)
genome : 101,436,646 - 101,612,515 (175,870)
query : 1 - 3,199 (3,199/3,216)
21 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.992;0.952;1.000;1.000;1.000;0.993;1.000;
1.000;1.000;1.000;1.000;1.000;0.994;1.000)3'
coverage = 1.000
InterPro :
IPR000014 : PAS domain
IPR001067 : Nuclear translocator
IPR001610 : PAC motif
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
IPR013767 : PAS fold
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0004871 : Molecular Function : signal transducer activity
0005634 : Cellular Component : nucleus
0005667 : Cellular Component : transcription factor complex
0005737 : Cellular Component : cytoplasm
0006355 : Biological Process : regulation of transcription, DNA-templated
0007165 : Biological Process : signal transduction
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 17.5, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200274)
HIX0200274
HIT000099326
(
BC051351
)
Representative transcript
(Neuronal PAS domain-containing protein 2; Neuronal PAS2; Basic-helix-loop-helix-PAS protein MOP4; Class E basic helix-loop-helix protein 9; bHLHe9; Member of PAS protein 4; PAS domain-containing protein 4;)
genome : 101,436,649 - 101,613,234 (176,586)
query : 1 - 3,915 (3,915/3,935)
21 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.992;0.952;1.000;1.000;1.000;0.993;1.000;
1.000;1.000;1.000;1.000;1.000;0.994;0.998)3'
coverage = 1.000
InterPro :
IPR000014 : PAS domain
IPR001067 : Nuclear translocator
IPR001610 : PAC motif
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
IPR013767 : PAS fold
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0004871 : Molecular Function : signal transducer activity
0005634 : Cellular Component : nucleus
0005667 : Cellular Component : transcription factor complex
0005737 : Cellular Component : cytoplasm
0006355 : Biological Process : regulation of transcription, DNA-templated
0007165 : Biological Process : signal transduction
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 17.5, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200274)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : AB087255
Macaca
sp. (Macaque) : AB173468
Gallus
sp. (Chicken) : AF396828
Bos
sp. (Cow) : BC134580
Oryzias
sp. (Medaka) : ENSORLT00000011821
Pongo
sp. (Orangutan) : ENSPPYT00000014041
Takifugu
sp. (Fugu) : SINFRUT00000133470
Mus
sp. (Mouse) : U77969
Rattus
sp. (Rat) : XM_001058630
Monodelphis
sp. (Opossum) : XM_001369635
Equus
sp. (Horse) : XM_001914983
Pan
sp. (Chimpanzee) : XM_515656
Canis
sp. (Dog) : XM_531781
HIX0200274
HIT000489357
(
AK294733
)
(Neuronal PAS domain-containing protein 2; Neuronal PAS2; Basic-helix-loop-helix-PAS protein MOP4; Class E basic helix-loop-helix protein 9; bHLHe9; Member of PAS protein 4; PAS domain-containing protein 4;)
genome : 101,437,487 - 101,612,097 (174,611)
query : 1 - 2,725 (2,725/2,725)
21 exons
identity = 0.997
5'(1.000;1.000;1.000;0.989;1.000;1.000;1.000;
0.992;0.952;1.000;1.000;1.000;0.993;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR000014 : PAS domain
IPR001067 : Nuclear translocator
IPR001610 : PAC motif
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
IPR013767 : PAS fold
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0004871 : Molecular Function : signal transducer activity
0005634 : Cellular Component : nucleus
0005667 : Cellular Component : transcription factor complex
0005737 : Cellular Component : cytoplasm
0006355 : Biological Process : regulation of transcription, DNA-templated
0007165 : Biological Process : signal transduction
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 16.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200274)
HIX0200274
HIT000641549 (
ENST00000542504
)
(Neuronal PAS domain-containing protein 2; Neuronal PAS2; Basic-helix-loop-helix-PAS protein MOP4; Class E basic helix-loop-helix protein 9; bHLHe9; Member of PAS protein 4; PAS domain-containing protein 4;)
genome : 101,437,487 - 101,612,097 (174,611)
query : 1 - 2,725 (2,725/2,725)
21 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.992;0.952;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 16.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200274)
HIX0200274
HIT000525347 (
ENST00000427413
)
(Neuronal PAS domain-containing protein 2; Neuronal PAS2; Basic-helix-loop-helix-PAS protein MOP4; Class E basic helix-loop-helix protein 9; bHLHe9; Member of PAS protein 4; PAS domain-containing protein 4;)
genome : 101,437,487 - 101,564,761 (127,275)
query : 1 - 625 (625/625)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 20.5, nucl 17, cyto 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200274)
HIX0162625
HIT000528520 (
ENST00000430586
)
(Hypothetical protein.)
genome : 101,439,123 - 101,463,682 (24,560)
query : 1 - 717 (717/717)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto_nucl 10.5, nucl 9.5, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162625)
HIX0024201
HIT000050140
(
AK130869
)
Representative transcript
(Hypothetical protein.)
genome : 101,464,506 - 101,466,473 (1,968)
query : 1 - 1,968 (1,968/1,968)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024201)
HIX0002322
HIT000005287
(
AK022013
)
Representative transcript
(Conserved hypothetical protein.)
genome : 101,492,527 - 101,493,907 (1,381)
query : 1 - 1,381 (1,381/1,381)
1 exon
identity = 0.993
5'(0.993)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29, mito 1.5, E.R._mito 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002322)
HIX0200274
HIT000220220
(
U51625
)
(Neuronal PAS domain-containing protein 2; Neuronal PAS2; Basic-helix-loop-helix-PAS protein MOP4; Class E basic helix-loop-helix protein 9; bHLHe9; Member of PAS protein 4; PAS domain-containing protein 4;)
genome : 101,521,191 - 101,606,767 (85,577)
query : 10 - 1,912 (1,903/1,912)
17 exons
identity = 0.995
5'(0.966;0.993;1.000;1.000;1.000;0.991;0.992;
0.952;1.000;1.000;1.000;0.993;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 0.995
InterPro :
IPR000014 : PAS domain
IPR001067 : Nuclear translocator
IPR001610 : PAC motif
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
IPR013767 : PAS fold
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0004871 : Molecular Function : signal transducer activity
0005634 : Cellular Component : nucleus
0005667 : Cellular Component : transcription factor complex
0005737 : Cellular Component : cytoplasm
0006355 : Biological Process : regulation of transcription, DNA-templated
0007165 : Biological Process : signal transduction
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 17, cyto 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200274)
HIX0200274
HIT000091492
(
BC028107
)
(Neuronal PAS domain-containing protein 2; Neuronal PAS2; Basic-helix-loop-helix-PAS protein MOP4; Class E basic helix-loop-helix protein 9; bHLHe9; Member of PAS protein 4; PAS domain-containing protein 4;)
genome : 101,521,193 - 101,606,757 (85,565)
query : 6 - 1,896 (1,891/1,896)
17 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.992;
0.952;1.000;1.000;1.000;0.993;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 0.997
InterPro :
IPR000014 : PAS domain
IPR001067 : Nuclear translocator
IPR001610 : PAC motif
IPR011598 : Myc-type, basic helix-loop-helix (bHLH) domain
IPR013767 : PAS fold
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0004871 : Molecular Function : signal transducer activity
0005634 : Cellular Component : nucleus
0005667 : Cellular Component : transcription factor complex
0005737 : Cellular Component : cytoplasm
0006355 : Biological Process : regulation of transcription, DNA-templated
0007165 : Biological Process : signal transduction
0046983 : Molecular Function : protein dimerization activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 17, cyto 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200274)
HIX0200274
HIT000546746 (
ENST00000448812
)
(Neuronal PAS domain-containing protein 2; Neuronal PAS2; Basic-helix-loop-helix-PAS protein MOP4; Class E basic helix-loop-helix protein 9; bHLHe9; Member of PAS protein 4; PAS domain-containing protein 4;)
genome : 101,541,608 - 101,587,511 (45,904)
query : 1 - 774 (774/774)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23.5, mito_nucl 14.8333, mito_pero 13.1667,
nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200274)
HIX0200274
HIT000589793 (
ENST00000486017
)
(Neuronal PAS domain-containing protein 2; Neuronal PAS2; Basic-helix-loop-helix-PAS protein MOP4; Class E basic helix-loop-helix protein 9; bHLHe9; Member of PAS protein 4; PAS domain-containing protein 4;)
genome : 101,541,608 - 101,580,638 (39,031)
query : 1 - 764 (764/764)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, mito_nucl 14, mito_pero 12.8333,
cyto_nucl 4.83333, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200274)
HIX0200274
HIT000549674 (
ENST00000451740
)
(Neuronal PAS domain-containing protein 2; Neuronal PAS2; Basic-helix-loop-helix-PAS protein MOP4; Class E basic helix-loop-helix protein 9; bHLHe9; Member of PAS protein 4; PAS domain-containing protein 4;)
genome : 101,541,624 - 101,554,304 (12,681)
query : 1 - 321 (321/321)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, extr 10, cyto_nucl 9.5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200274)
HIX0200274
HIT000595861 (
ENST00000492373
)
(Neuronal PAS domain-containing protein 2; Neuronal PAS2; Basic-helix-loop-helix-PAS protein MOP4; Class E basic helix-loop-helix protein 9; bHLHe9; Member of PAS protein 4; PAS domain-containing protein 4;)
genome : 101,550,573 - 101,581,380 (30,808)
query : 1 - 552 (552/552)
6 exons
identity = 0.991
5'(1.000;1.000;1.000;1.000;0.992;0.931)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 12.5, cyto_nucl 9, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200274)
HIX0200274
HIT000385223
(
AK226093
)
(Neuronal PAS domain-containing protein 2; Neuronal PAS2; Basic-helix-loop-helix-PAS protein MOP4; Class E basic helix-loop-helix protein 9; bHLHe9; Member of PAS protein 4; PAS domain-containing protein 4;)
genome : 101,564,720 - 101,612,201 (47,482)
query : 1 - 2,246 (2,246/2,246)
16 exons
identity = 0.997
5'(1.000;1.000;0.992;0.952;1.000;1.000;1.000;
0.993;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000014 : PAS domain
IPR001610 : PAC motif
GO :
0004871 : Molecular Function : signal transducer activity
0007165 : Biological Process : signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 16, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200274)
HIX0200274
HIT000055248
(
BX640699
)
(Neuronal PAS domain-containing protein 2; Neuronal PAS2; Basic-helix-loop-helix-PAS protein MOP4; Class E basic helix-loop-helix protein 9; bHLHe9; Member of PAS protein 4; PAS domain-containing protein 4;)
genome : 101,587,063 - 101,612,515 (25,453)
query : 1 - 7,981 (7,981/7,998)
9 exons
identity = 0.997
5'(0.998;0.986;1.000;1.000;0.997;1.000;1.000;
0.994;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 10.5, extr 9, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200274)
HIX0200274
HIT000578834 (
ENST00000474550
)
(Neuronal PAS domain-containing protein 2; Neuronal PAS2; Basic-helix-loop-helix-PAS protein MOP4; Class E basic helix-loop-helix protein 9; bHLHe9; Member of PAS protein 4; PAS domain-containing protein 4;)
genome : 101,587,063 - 101,612,517 (25,455)
query : 1 - 7,983 (7,983/7,983)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 10.5, extr 9, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200274)
HIX0161835
HIT000544578 (
ENST00000446644
)
(Hypothetical short protein.)
genome : 101,589,110 - 101,593,262 (4,153)
query : 1 - 410 (410/410)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11.5, extr 10, cyto_nucl 9, cyto 5.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161835)
HIX0161835
HIT000537084 (
ENST00000439150
)
(Hypothetical short protein.)
genome : 101,589,110 - 101,592,162 (3,053)
query : 1 - 493 (493/493)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 8.5, extr_plas 8.5, cyto_nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161835)
HIX0200274
HIT000576374 (
ENST00000471974
)
(Neuronal PAS domain-containing protein 2; Neuronal PAS2; Basic-helix-loop-helix-PAS protein MOP4; Class E basic helix-loop-helix protein 9; bHLHe9; Member of PAS protein 4; PAS domain-containing protein 4;)
genome : 101,591,265 - 101,599,098 (7,834)
query : 1 - 513 (513/513)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 8.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200274)
HIX0200274
HIT000020661
(
AK095806
)
(Neuronal PAS domain-containing protein 2; Neuronal PAS2; Basic-helix-loop-helix-PAS protein MOP4; Class E basic helix-loop-helix protein 9; bHLHe9; Member of PAS protein 4; PAS domain-containing protein 4;)
genome : 101,591,328 - 101,613,287 (21,960)
query : 1 - 2,033 (2,033/2,033)
6 exons
identity = 0.996
5'(1.000;1.000;1.000;0.993;0.983;0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, mito 6, extr 4, cyto 2.5, cyto_pero 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200274)
HIX0200274
HIT000548697 (
ENST00000450763
)
(Neuronal PAS domain-containing protein 2; Neuronal PAS2; Basic-helix-loop-helix-PAS protein MOP4; Class E basic helix-loop-helix protein 9; bHLHe9; Member of PAS protein 4; PAS domain-containing protein 4;)
genome : 101,591,328 - 101,609,989 (18,662)
query : 1 - 607 (607/607)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, mito 5, extr 4, cyto 4, cyto_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200274)
HIX0161835
HIT000530946 (
ENST00000433012
)
(Hypothetical short protein.)
genome : 101,592,088 - 101,593,623 (1,536)
query : 1 - 489 (489/489)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0161835)
HIX0200274
HIT000531342 (
ENST00000433408
)
(Neuronal PAS domain-containing protein 2; Neuronal PAS2; Basic-helix-loop-helix-PAS protein MOP4; Class E basic helix-loop-helix protein 9; bHLHe9; Member of PAS protein 4; PAS domain-containing protein 4;)
genome : 101,598,716 - 101,612,517 (13,802)
query : 1 - 1,047 (1,047/1,047)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 14.5, cyto 6, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200274)
HIX0200274
HIT000048459
(
AK128586
)
(Neuronal PAS domain-containing protein 2; Neuronal PAS2;)
genome : 101,604,772 - 101,613,284 (8,513)
query : 1 - 3,834 (3,834/3,834)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200274)
HIX0200274
HIT000598919 (
ENST00000495559
)
(Neuronal PAS domain-containing protein 2; Neuronal PAS2;)
genome : 101,604,772 - 101,613,284 (8,513)
query : 1 - 3,834 (3,834/3,834)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200274)
HIX0200274
HIT000016806
(
AK091939
)
(Neuronal PAS domain-containing protein 2; Neuronal PAS2;)
genome : 101,605,962 - 101,613,287 (7,326)
query : 1 - 2,648 (2,648/2,648)
4 exons
identity = 0.999
5'(0.999;1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200274)
HIX0030289
HIT000093884
(
BC035412
)
Representative transcript
(Conserved hypothetical protein.)
genome : 101,610,135 - 101,618,706 (8,572)
query : 1 - 3,488 (3,488/3,503)
2 exons
identity = 0.998
3'(0.998;0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 9.83333, cyto 9, nucl 7.5,
cyto_pero 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030289)
HIX0030289
HIT000550298 (
ENST00000452364
)
(Conserved hypothetical protein.)
genome : 101,610,138 - 101,618,706 (8,569)
query : 1 - 3,485 (3,485/3,485)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 9.83333, cyto 9, nucl 7.5,
cyto_pero 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030289)
HIX0200274
HIT000016532
(
AK091665
)
(Conserved hypothetical protein.)
genome : 101,610,453 - 101,613,234 (2,782)
query : 2 - 2,018 (2,017/2,018)
2 exons
identity = 0.999
5'(0.999;0.943)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 7.5, cyto_nucl 7, cyto_pero 6.16667,
extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200274)
HIX0200274
HIT000593629 (
ENST00000490052
)
(Hypothetical protein.)
genome : 101,610,905 - 101,612,517 (1,613)
query : 1 - 398 (398/398)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, nucl 14, cyto 11, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200274)
HIX0200274
HIT000010065
(
AK026791
)
(Neuronal PAS domain-containing protein 2; Neuronal PAS2;)
genome : 101,611,395 - 101,613,282 (1,888)
query : 1 - 1,888 (1,888/1,904)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, cyto 7.5, cyto_nucl 7.16667, cyto_pero 6,
nucl 3.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0200274)
HIX0002323
HIT000109248 (
ENST00000264258
)
(60S ribosomal protein L31;)
genome : 101,618,177 - 101,623,729 (5,553)
query : 1 - 1,865 (1,865/1,865)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002323)
HIX0002323
HIT000485250 (
NM_001098577
)
(60S ribosomal protein L31;)
genome : 101,618,691 - 101,636,155 (17,465)
query : 1 - 1,129 (1,129/1,129)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, mito 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002323)
HIX0002323
HIT000198000 (
NM_000993
)
(60S ribosomal protein L31;)
genome : 101,618,691 - 101,622,885 (4,195)
query : 1 - 507 (507/524)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, mito 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002323)
HIX0002323
HIT000485424 (
NM_001099693
)
(60S ribosomal protein L31 isoform 3.)
genome : 101,618,691 - 101,622,885 (4,195)
query : 1 - 785 (785/801)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, mito 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002323)
HIX0002323
HIT000507037 (
ENST00000409000
)
(60S ribosomal protein L31;)
genome : 101,618,691 - 101,621,066 (2,376)
query : 1 - 641 (641/641)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, mito 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002323)
HIX0002323
HIT000507064 (
ENST00000409028
)
(60S ribosomal protein L31;)
genome : 101,618,745 - 101,636,078 (17,334)
query : 1 - 998 (998/998)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002323)
HIX0002323
HIT000491871
(
AK297247
)
(60S ribosomal protein L31;)
genome : 101,618,755 - 101,635,064 (16,310)
query : 2 - 1,084 (1,083/1,084)
5 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.997)3'
coverage = 0.999
InterPro :
IPR000054 : Ribosomal protein L31e
IPR020052 : Ribosomal protein L31e, conserved site
IPR023621 : Ribosomal protein L31e domain
GO :
0003735 : Molecular Function : structural constituent of ribosome
0005622 : Cellular Component : intracellular
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002323)
HIX0002323
HIT000491791
(
AK297167
)
(60S ribosomal protein L31;)
genome : 101,618,756 - 101,634,991 (16,236)
query : 3 - 1,041 (1,039/1,041)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.998
InterPro :
IPR000054 : Ribosomal protein L31e
IPR020052 : Ribosomal protein L31e, conserved site
IPR023621 : Ribosomal protein L31e domain
GO :
0003735 : Molecular Function : structural constituent of ribosome
0005622 : Cellular Component : intracellular
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002323)
HIX0002323
HIT000430641
(
AK311775
)
(60S ribosomal protein L31;)
genome : 101,618,756 - 101,622,843 (4,088)
query : 3 - 402 (400/402)
5 exons
identity = 0.998
5'(1.000;1.000;1.000;0.991;1.000)3'
coverage = 0.995
InterPro :
IPR000054 : Ribosomal protein L31e
IPR020052 : Ribosomal protein L31e, conserved site
IPR023621 : Ribosomal protein L31e domain
GO :
0003735 : Molecular Function : structural constituent of ribosome
0005622 : Cellular Component : intracellular
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002323)
HIX0002323
HIT000492107
(
AK297483
)
Representative transcript
(60S ribosomal protein L31;)
genome : 101,618,755 - 101,636,067 (17,313)
query : 1 - 977 (977/977)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR000054 : Ribosomal protein L31e
IPR020052 : Ribosomal protein L31e, conserved site
IPR023621 : Ribosomal protein L31e domain
GO :
0003735 : Molecular Function : structural constituent of ribosome
0005622 : Cellular Component : intracellular
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002323)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB170175
Mus
sp. (Mouse) : AK011236
Bos
sp. (Cow) : AY911357
Danio
sp. (Zebrafish) : BC114301
Gallus
sp. (Chicken) : CR387290
Tetraodon
sp. (Tetraodon) : CR713727
Pongo
sp. (Orangutan) : CR858565
Monodelphis
sp. (Opossum) : ENSMODT00000002133
Oryzias
sp. (Medaka) : ENSORLT00000006525
Takifugu
sp. (Fugu) : SINFRUT00000136457
Rattus
sp. (Rat) : X04809
Pan
sp. (Chimpanzee) : XM_001162291
Equus
sp. (Horse) : XM_001489469
Canis
sp. (Dog) : XM_541012
HIX0002323
HIT000507074 (
ENST00000409038
)
(60S ribosomal protein L31;)
genome : 101,618,755 - 101,634,768 (16,014)
query : 1 - 817 (817/817)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002323)
HIX0002323
HIT000507679 (
ENST00000409650
)
(60S ribosomal protein L31;)
genome : 101,618,755 - 101,634,751 (15,997)
query : 1 - 770 (770/770)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002323)
HIX0002323
HIT000264168
(
BC070210
)
(60S ribosomal protein L31 isoform 3.)
genome : 101,618,755 - 101,622,880 (4,126)
query : 1 - 716 (716/746)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR000054 : Ribosomal protein L31e
IPR020052 : Ribosomal protein L31e, conserved site
IPR023621 : Ribosomal protein L31e domain
GO :
0003735 : Molecular Function : structural constituent of ribosome
0005622 : Cellular Component : intracellular
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002323)
HIX0002323
HIT000264328
(
BC070373
)
(60S ribosomal protein L31;)
genome : 101,618,755 - 101,622,880 (4,126)
query : 1 - 438 (438/466)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.998
InterPro :
IPR000054 : Ribosomal protein L31e
IPR020052 : Ribosomal protein L31e, conserved site
IPR023621 : Ribosomal protein L31e domain
GO :
0003735 : Molecular Function : structural constituent of ribosome
0005622 : Cellular Component : intracellular
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002323)
HIX0002323
HIT000507758 (
ENST00000409733
)
(60S ribosomal protein L31;)
genome : 101,618,755 - 101,622,881 (4,127)
query : 1 - 825 (825/825)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002323)
HIX0002323
HIT000507352 (
ENST00000409320
)
(60S ribosomal protein L31 isoform 3.)
genome : 101,618,755 - 101,622,880 (4,126)
query : 1 - 716 (716/716)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002323)
HIX0002323
HIT000507737 (
ENST00000409711
)
(60S ribosomal protein L31;)
genome : 101,619,153 - 101,622,829 (3,677)
query : 1 - 2,328 (2,328/2,328)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, mito 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002323)
HIX0002323
HIT000554226 (
ENST00000456292
)
(60S ribosomal protein L31;)
genome : 101,619,153 - 101,622,533 (3,381)
query : 1 - 357 (357/357)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002323)
HIX0002323
HIT000321530
(
X15940
)
(60S ribosomal protein L31;)
genome : 101,619,164 - 101,622,880 (3,717)
query : 8 - 414 (407/414)
4 exons
identity = 0.978
5'(1.000;1.000;1.000;0.870)3'
coverage = 0.983
InterPro :
IPR000054 : Ribosomal protein L31e
IPR020052 : Ribosomal protein L31e, conserved site
IPR023621 : Ribosomal protein L31e domain
GO :
0003735 : Molecular Function : structural constituent of ribosome
0005622 : Cellular Component : intracellular
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002323)
HIX0002323
HIT000030557
(
BC001663
)
(60S ribosomal protein L31 isoform 3.)
genome : 101,619,164 - 101,622,885 (3,722)
query : 6 - 781 (776/797)
3 exons
identity = 0.999
5'(1.000;1.000;0.998)3'
coverage = 0.994
InterPro :
IPR000054 : Ribosomal protein L31e
IPR020052 : Ribosomal protein L31e, conserved site
IPR023621 : Ribosomal protein L31e domain
GO :
0003735 : Molecular Function : structural constituent of ribosome
0005622 : Cellular Component : intracellular
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, mito 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002323)
HIX0002323
HIT000517210 (
ENST00000419276
)
(60S ribosomal protein L31 isoform 3.)
genome : 101,619,164 - 101,622,885 (3,722)
query : 6 - 781 (776/781)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, mito 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002323)
HIX0002323
HIT000037955
(
BC017343
)
(60S ribosomal protein L31;)
genome : 101,619,164 - 101,622,885 (3,722)
query : 3 - 422 (420/439)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.995
InterPro :
IPR000054 : Ribosomal protein L31e
IPR020052 : Ribosomal protein L31e, conserved site
IPR023621 : Ribosomal protein L31e domain
GO :
0003735 : Molecular Function : structural constituent of ribosome
0005622 : Cellular Component : intracellular
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002323)
HIX0002323
HIT000584551_01 (
ENST00000480540
)
(60S ribosomal protein L31;)
genome : 101,619,164 - 101,622,843 (3,680)
query : 1 - 376 (376/376)
4 exons
identity = 0.968
5'(0.953;0.984;0.956;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002323)
HIX0002323
HIT000601636_01 (
ENST00000498412
)
(60S ribosomal protein L31;)
genome : 101,619,164 - 101,622,843 (3,680)
query : 1 - 377 (377/377)
4 exons
identity = 0.952
5'(0.953;0.968;0.920;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 27, cyto_nucl 15.5, nucl 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002323)
HIX0002323
HIT000594305_01 (
ENST00000490759
)
(60S ribosomal protein L31 isoform 2.)
genome : 101,619,164 - 101,622,533 (3,370)
query : 1 - 346 (346/375)
3 exons
identity = 0.962
5'(0.963;0.968;0.956)3'
coverage = 0.923
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, mito 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002323)
HIX0002323
HIT000322969
(
X69181
)
(60S ribosomal protein L31;)
genome : 101,619,176 - 101,622,880 (3,705)
query : 1 - 403 (403/403)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000054 : Ribosomal protein L31e
IPR020052 : Ribosomal protein L31e, conserved site
IPR023621 : Ribosomal protein L31e domain
GO :
0003735 : Molecular Function : structural constituent of ribosome
0005622 : Cellular Component : intracellular
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 15, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002323)
HIX0002323
HIT000539369 (
ENST00000441435
)
(60S ribosomal protein L31;)
genome : 101,619,201 - 101,640,494 (21,294)
query : 1 - 717 (717/717)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002323)
HIX0002324
HIT000003223
(
AK000748
)
(Conserved hypothetical protein.)
genome : 101,622,395 - 101,638,970 (16,576)
query : 1 - 2,333 (2,333/2,333)
2 exons
identity = 0.996
3'(0.998;0.979)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 12, cyto_nucl 11, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002324)
HIX0002323
HIT000476782_02 (
ENST00000393325
)
(60S ribosomal protein L31;)
genome : 101,622,422 - 101,622,843 (422)
query : 1 - 144 (144/144)
2 exons
identity = 0.965
5'(0.955;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, nucl 7, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002323)
HIX0002324
eHIT000014065 ( ESTsASS_2_166 )
(Non-protein coding transcript.)
genome : 101,624,021 - 101,767,844 (143,824)
query : 1 - 3,859 (3,859/3,859)
20 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002324)
ESTs used for assembly :
AW388196,BG419020,DC418385,DA428506
CD722231,BE772857,CR739061,DA678681
BP291834,AI906348,DA182581,BQ673509
CD623627,AI077460,BF734569,BE837734
CN354821,DB018245,DC422300,DB003829
DB079019,CD623625,AA308661,DW450151
DC415735
HIX0002324
HIT000021342
(
AK096487
)
(Conserved hypothetical protein.)
genome : 101,626,594 - 101,629,087 (2,494)
query : 1 - 2,494 (2,494/2,494)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 12.5, extr 9, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002324)
HIX0002324
HIT000597422 (
ENST00000494011
)
(EF-hand domain pair containing protein.)
genome : 101,627,502 - 101,638,835 (11,334)
query : 1 - 660 (660/660)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 12.5, cyto_nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002324)
HIX0030106
HIT000067154
(
AF086275
)
Representative transcript
(TBC1 domain family member 8.)
genome : 101,627,702 - 101,628,378 (677)
query : 1 - 677 (677/687)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 0.999
SOSUI :
This sequence is too short.
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030106)
HIX0002325
HIT000018410
(
AK093543
)
Representative transcript
(Conserved hypothetical protein.)
genome : 101,635,004 - 101,637,620 (2,617)
query : 1 - 2,299 (2,299/2,299)
2 exons
identity = 0.997
3'(0.998;0.996)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 13, nucl 12, cyto 10, extr 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002325)
HIX0002324
HIT000022962
(
AK098124
)
(Conserved hypothetical protein.)
genome : 101,637,763 - 101,640,490 (2,728)
query : 1 - 2,470 (2,470/2,470)
2 exons
identity = 0.994
3'(0.999;0.983)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, mito 4, lyso 2, cyto_mito 2, mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002324)
HIX0002324
HIT000578245 (
ENST00000473937
)
(Rab-GTPase-TBC domain containing protein.)
genome : 101,644,765 - 101,649,406 (4,642)
query : 1 - 1,093 (1,093/1,093)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito_pero 7.83333, E.R._mito 7.16667, mito 7, pero 6,
plas 5, extr 4, cyto 4, nucl 3, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002324)
HIX0002324
HIT000589659 (
ENST00000485875
)
(Rab-GTPase-TBC domain containing protein.)
genome : 101,644,807 - 101,646,434 (1,628)
query : 1 - 570 (570/570)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, mito 4.5, cyto_mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002324)
HIX0002324
HIT000585293 (
ENST00000481317
)
(Rab-GTPase-TBC domain containing protein.)
genome : 101,644,929 - 101,648,943 (4,015)
query : 1 - 573 (573/573)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 8, mito_pero 6.5, E.R._mito 5.5, cyto 5, mito 5,
pero 4.5, cyto_plas 4.5, plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002324)
HIX0002324
HIT000495157
(
AK300533
)
Representative transcript
(GRAM domain containing protein.)
genome : 101,649,703 - 101,767,846 (118,144)
query : 1 - 2,252 (2,252/2,252)
10 exons
identity = 0.998
3'(1.000;0.993;1.000;1.000;0.990;1.000;0.991;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000195 : Rab-GTPase-TBC domain
IPR004182 : GRAM domain
GO :
0005097 : Molecular Function : Rab GTPase activator activity
0032313 : Biological Process : regulation of Rab GTPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 13, cysk 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002324)
HIX0002324
HIT000591097 (
ENST00000487392
)
(Conserved hypothetical protein.)
genome : 101,675,914 - 101,726,425 (50,512)
query : 1 - 373 (373/373)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, cyto_nucl 16.5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002324)
HIX0002324
HIT000568262 (
ENST00000463469
)
(Conserved hypothetical protein.)
genome : 101,706,715 - 101,869,328 (162,614)
query : 1 - 561 (561/561)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 6, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002324)
HIX0017568
HIT000013161
(
AK056547
)
(Conserved hypothetical protein.)
genome : 101,768,122 - 101,771,872 (3,751)
query : 1 - 2,475 (2,475/2,475)
2 exons
identity = 0.997
5'(0.999;0.995)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, extr 10, mito 5, extr_plas 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017568)
HIX0017568
HIT000088414
(
BC014493
)
Representative transcript
(Conserved hypothetical protein.)
genome : 101,768,144 - 101,771,873 (3,730)
query : 1 - 2,455 (2,455/2,475)
2 exons
identity = 1.000
5'(0.999;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, extr 8, mito 5, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017568)
HIX0017568
HIT000265693
(
BC077729
)
(Conserved hypothetical protein.)
genome : 101,768,144 - 101,771,873 (3,730)
query : 1 - 2,455 (2,455/2,475)
2 exons
identity = 1.000
5'(0.999;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, extr 10, mito 5, extr_plas 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017568)
HIX0002324
HIT000567640 (
ENST00000462819
)
(Conserved hypothetical protein.)
genome : 101,804,286 - 101,869,317 (65,032)
query : 1 - 580 (580/580)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 12.5, cyto_nucl 9.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002324)
HIX0002324
HIT000589637 (
ENST00000485851
)
(Hypothetical short protein.)
genome : 101,804,446 - 101,869,326 (64,881)
query : 1 - 539 (539/539)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 12.5, cyto_nucl 9.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002324)
HIX0204051
HIT000452596_07
(
DQ586065
)
Representative transcript
(Non-protein coding transcript.)
genome : 101,810,040 - 101,810,069 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0204051)
HIX0018717
HIT000022086
(
AK097231
)
Representative transcript
(Conserved hypothetical protein.)
genome : 101,817,273 - 101,820,029 (2,757)
query : 1 - 2,755 (2,755/2,755)
1 exon
identity = 0.991
5'(0.991)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 10.5, cyto_nucl 10.5, nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018717)
HIX0002326
HIT000113115 (
ENST00000289382
)
(Protein of unknown function DUF2363 family protein.)
genome : 101,869,264 - 101,886,778 (17,515)
query : 1 - 2,599 (2,599/2,599)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 14, cyto 9.5, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002326)
HIX0002326
HIT000206455 (
NM_017546
)
(Protein of unknown function DUF2363 family protein.)
genome : 101,869,345 - 101,886,778 (17,434)
query : 1 - 2,518 (2,518/2,544)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 14, cyto 9.5, golg 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002326)
HIX0002326
HIT000069390
(
AF103798
)
Representative transcript
(Protein of unknown function DUF2363 family protein.)
genome : 101,869,362 - 101,886,002 (16,641)
query : 9 - 1,733 (1,725/1,750)
7 exons
identity = 0.999
5'(0.998;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR019312 : Protein of unknown function DUF2363
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 14, cyto 9.5, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002326)
HIX0002326
HIT000261384
(
BC064421
)
(Protein of unknown function DUF2363 family protein.)
genome : 101,869,378 - 101,886,776 (17,399)
query : 1 - 2,484 (2,484/2,590)
7 exons
identity = 0.999
5'(0.998;1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR019312 : Protein of unknown function DUF2363
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 14, cyto 10.5, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002326)
HIX0002326
HIT000050712
(
BC018664
)
(Protein of unknown function DUF2363 family protein.)
genome : 101,869,436 - 101,886,778 (17,343)
query : 1 - 2,427 (2,427/2,453)
7 exons
identity = 1.000
5'(0.998;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR019312 : Protein of unknown function DUF2363
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12, nucl 11, cyto 9, extr 7, mito 2, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002326)
HIX0002326
HIT000007495
(
AK024221
)
(Protein of unknown function DUF2363 family protein.)
genome : 101,874,265 - 101,886,777 (12,513)
query : 26 - 1,934 (1,909/1,934)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.987
InterPro :
IPR019312 : Protein of unknown function DUF2363
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 12, mito 7, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002326)
HIX0002326
HIT000567320 (
ENST00000462489
)
(Conserved hypothetical protein.)
genome : 101,878,893 - 101,883,246 (4,354)
query : 1 - 572 (572/572)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, mito 3, cyto 2.5, cyto_nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002326)
HIX0002326
HIT000518041 (
ENST00000420107
)
(Protein of unknown function DUF2363 family protein.)
genome : 101,881,437 - 101,885,777 (4,341)
query : 1 - 552 (552/552)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 15, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002326)
HIX0023941
HIT000589547 (
ENST00000485752
)
(Conserved hypothetical protein.)
genome : 101,887,681 - 101,889,398 (1,718)
query : 1 - 621 (621/621)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 8, cyto_nucl 7.66667, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023941)
HIX0023941
HIT000049070
(
AK129799
)
Representative transcript
(E3 ubiquitin-protein ligase RNF149 precursor.)
genome : 101,887,684 - 101,925,163 (37,480)
query : 1 - 2,010 (2,010/2,010)
8 exons
identity = 1.000
3'(1.000;1.000;0.995;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR003137 : Protease-associated domain, PA
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 15, E.R. 8, extr 4, E.R._mito 4, E.R._golg 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023941)
HIX0023941
HIT000522566 (
ENST00000424632
)
(Protease-associated domain, PA containing protein.)
genome : 101,887,684 - 101,925,163 (37,480)
query : 1 - 2,010 (2,010/2,010)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 15, E.R. 8, extr 4, E.R._mito 4, E.R._golg 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023941)
HIX0023941
HIT000046134
(
AK126261
)
(Conserved hypothetical protein.)
genome : 101,887,684 - 101,889,902 (2,219)
query : 1 - 2,221 (2,221/2,221)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 15, plas 6, extr 6, extr_plas 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023941)
HIX0023941
HIT000367340 (
NR_003070
)
(Hypothetical short protein.)
genome : 101,889,398 - 101,889,511 (114)
query : 1 - 114 (114/114)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023941)
HIX0023941
HIT000474508 (
ENST00000390981
)
(Hypothetical short protein.)
genome : 101,889,398 - 101,889,511 (114)
query : 1 - 114 (114/114)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023941)
HIX0023941
HIT000215024 (
NM_173647
)
(Protease-associated domain, PA containing protein.)
genome : 101,892,063 - 101,925,178 (33,116)
query : 1 - 2,968 (2,968/2,968)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 14, E.R. 8, extr 4, E.R._mito 4, E.R._golg 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023941)
HIX0023941
HIT000114131 (
ENST00000295317
)
(Protease-associated domain, PA containing protein.)
genome : 101,892,553 - 101,925,158 (32,606)
query : 1 - 2,458 (2,458/2,458)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 14, E.R. 8, extr 4, E.R._mito 4, E.R._golg 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023941)
HIX0023941
HIT000082020
(
AK074985
)
(E3 ubiquitin-protein ligase RNF149; EC=6.3.2.-; DNA polymerase-transactivated protein 2; RING finger protein 149; Precursor;)
genome : 101,892,553 - 101,925,152 (32,600)
query : 1 - 2,452 (2,452/2,452)
7 exons
identity = 1.000
3'(1.000;0.995;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
InterPro :
IPR003137 : Protease-associated domain, PA
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 14, E.R. 8, extr 4, E.R._mito 4, E.R._golg 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023941)
HIX0023941
HIT000092602
(
BC032328
)
(E3 ubiquitin-protein ligase RNF149; EC=6.3.2.-; DNA polymerase-transactivated protein 2; RING finger protein 149; Precursor;)
genome : 101,892,999 - 101,925,129 (32,131)
query : 12 - 1,994 (1,983/2,013)
7 exons
identity = 0.997
3'(0.999;0.990;1.000;1.000;1.000;1.000;0.996)5'
coverage = 0.994
EC number :
EC 6.3.2.-
InterPro :
IPR003137 : Protease-associated domain, PA
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 12, E.R. 12, lyso 4, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023941)
HIX0023941
HIT000050731
(
BC019355
)
(E3 ubiquitin-protein ligase RNF149; EC=6.3.2.-; DNA polymerase-transactivated protein 2; RING finger protein 149; Precursor;)
genome : 101,892,999 - 101,925,129 (32,131)
query : 1 - 1,983 (1,983/2,001)
7 exons
identity = 0.999
3'(1.000;0.995;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
InterPro :
IPR003137 : Protease-associated domain, PA
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 14, E.R. 8, extr 4, E.R._mito 4, E.R._golg 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023941)
HIX0023941
HIT000052969
(
BC045743
)
(E3 ubiquitin-protein ligase RNF149; EC=6.3.2.-; DNA polymerase-transactivated protein 2; RING finger protein 149; Precursor;)
genome : 101,892,999 - 101,925,152 (32,154)
query : 1 - 2,006 (2,006/2,021)
7 exons
identity = 0.999
3'(0.999;0.995;1.000;1.000;1.000;1.000;0.998)5'
coverage = 1.000
EC number :
EC 6.3.2.-
InterPro :
IPR003137 : Protease-associated domain, PA
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 14, E.R. 8, extr 4, E.R._mito 4, E.R._golg 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023941)
HIX0023941
HIT000254747
(
AY450390
)
(E3 ubiquitin-protein ligase RNF149; EC=6.3.2.-; DNA polymerase-transactivated protein 2; RING finger protein 149; Precursor;)
genome : 101,892,999 - 101,925,152 (32,154)
query : 1 - 2,006 (2,006/2,021)
7 exons
identity = 0.999
3'(0.999;0.995;1.000;1.000;1.000;1.000;0.998)5'
coverage = 1.000
EC number :
EC 6.3.2.-
InterPro :
IPR003137 : Protease-associated domain, PA
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 14, E.R. 8, extr 4, E.R._mito 4, E.R._golg 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023941)
HIX0023941
HIT000082176
(
AK075141
)
(E3 ubiquitin-protein ligase RNF149; EC=6.3.2.-; DNA polymerase-transactivated protein 2; RING finger protein 149; Precursor;)
genome : 101,893,000 - 101,925,152 (32,153)
query : 1 - 2,005 (2,005/2,005)
7 exons
identity = 0.999
3'(1.000;0.995;1.000;1.000;1.000;1.000;0.996)5'
coverage = 1.000
EC number :
EC 6.3.2.-
InterPro :
IPR003137 : Protease-associated domain, PA
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 12, E.R. 12, lyso 4, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023941)
HIX0023941
HIT000594109 (
ENST00000490553
)
(Conserved hypothetical protein.)
genome : 101,897,973 - 101,902,569 (4,597)
query : 1 - 574 (574/592)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, cyto 10.5, extr 10, nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023941)
HIX0023941
HIT000568508 (
ENST00000463726
)
(Conserved hypothetical protein.)
genome : 101,898,321 - 101,902,965 (4,645)
query : 1 - 622 (622/622)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 9, extr 8, cyto 7.5, cyto_nucl 7.5,
cyto_pero 6.66667, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023941)
HIX0023941
HIT000582512 (
ENST00000478404
)
(Conserved hypothetical protein.)
genome : 101,905,170 - 101,911,124 (5,955)
query : 1 - 997 (997/997)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, extr 10, mito 7, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023941)
HIX0023941
HIT000043373
(
AK123500
)
(Conserved hypothetical protein.)
genome : 101,909,463 - 101,911,369 (1,907)
query : 1 - 1,905 (1,905/1,905)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0023941)
HIX0214877
HIT000690416 (
ENST00000578474
)
(Non-protein coding transcript.)
genome : 101,925,912 - 101,925,996 (85)
query : 1 - 85 (85/85)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214877)
HIX0214877
HIT000727283 (
NR_049881
)
(Non-protein coding transcript.)
genome : 101,925,912 - 101,925,996 (85)
query : 1 - 85 (85/85)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0214877)
HIX0002327
HIT000214487 (
NM_153836
)
(Protein CREG2; Precursor;)
genome : 101,964,816 - 102,003,965 (39,150)
query : 1 - 3,488 (3,488/3,488)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, mito 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002327)
HIX0002327
HIT000059454
(
AB046109
)
Representative transcript
(Protein CREG2; Precursor;)
genome : 101,965,225 - 102,004,057 (38,833)
query : 1 - 3,175 (3,175/3,201)
4 exons
identity = 0.997
3'(0.996;1.000;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR012349 : FMN-binding split barrel
GO :
0010181 : Molecular Function : FMN binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002327)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK134713
Danio
sp. (Zebrafish) : BC085654
Macaca
sp. (Macaque) : ENSMMUT00000024408
Oryzias
sp. (Medaka) : ENSORLT00000015373
Takifugu
sp. (Fugu) : SINFRUT00000163825
Gallus
sp. (Chicken) : XM_001233981
Monodelphis
sp. (Opossum) : XM_001369891
Rattus
sp. (Rat) : XM_237081
Pan
sp. (Chimpanzee) : XM_515663
Canis
sp. (Dog) : XM_849204
Bos
sp. (Cow) : XM_870951
HIX0002327
HIT000123965 (
ENST00000324768
)
(Protein CREG2; Precursor;)
genome : 101,965,209 - 102,004,057 (38,849)
query : 1 - 3,187 (3,187/3,187)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002327)
HIX0002327
HIT000092878
(
BC032949
)
(Protein CREG2; Precursor;)
genome : 101,966,215 - 102,003,965 (37,751)
query : 1 - 2,089 (2,089/2,103)
4 exons
identity = 0.999
3'(0.998;1.000;1.000;0.998)5'
coverage = 1.000
InterPro :
IPR012349 : FMN-binding split barrel
GO :
0010181 : Molecular Function : FMN binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002327)
HIX0002327
HIT000053154
(
BC047514
)
(Protein CREG2; Precursor;)
genome : 101,966,215 - 102,003,965 (37,751)
query : 1 - 2,091 (2,091/2,103)
4 exons
identity = 0.997
3'(0.997;1.000;1.000;0.994)5'
coverage = 1.000
InterPro :
IPR012349 : FMN-binding split barrel
GO :
0010181 : Molecular Function : FMN binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002327)
HIX0002327
HIT000019825
(
AK094970
)
(Protein CREG2 precursor.)
genome : 101,966,216 - 102,003,863 (37,648)
query : 1 - 1,987 (1,987/1,987)
4 exons
identity = 0.999
3'(0.999;1.000;1.000;0.997)5'
coverage = 1.000
InterPro :
IPR012349 : FMN-binding split barrel
GO :
0010181 : Molecular Function : FMN binding
0016491 : Molecular Function : oxidoreductase activity
0055114 : Biological Process : oxidation-reduction process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, nucl 5, cyto_nucl 4.5, mito 3, cyto 2,
pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002327)
HIX0162245
HIT000512380 (
ENST00000414446
)
(Succinate dehydrogenase [ubiquinone] cytochrome b small subunit, CybS family protein.)
genome : 101,992,049 - 101,992,517 (469)
query : 1 - 469 (469/469)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 1, cyto 1, mito 1, cyto_nucl 1, lyso 1,
cyto_mito 1, mito_nucl 1
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162245)
HIX0002327
HIT000598817 (
ENST00000495455
)
(Protein CREG2 precursor.)
genome : 101,998,541 - 102,003,602 (5,062)
query : 1 - 906 (906/906)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, extr 8, cyto_pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002327)
HIX0002327
HIT000590688 (
ENST00000486966
)
(Protein CREG2 precursor.)
genome : 101,999,388 - 102,003,928 (4,541)
query : 1 - 775 (775/775)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002327)
HIX0024074
HIT000044849
(
AK124976
)
(Conserved hypothetical protein.)
genome : 102,013,823 - 102,096,396 (82,574)
query : 1 - 2,784 (2,784/2,784)
7 exons
identity = 0.991
3'(0.997;1.000;0.986;1.000;1.000;1.000;0.990)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 12.5, cyto 12.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024074)
HIX0024074
HIT000249577
(
AK131289
)
Representative transcript
(DNA-binding protein RFX8; Regulatory factor X 8;)
genome : 102,013,823 - 102,091,165 (77,343)
query : 1 - 1,907 (1,907/1,907)
14 exons
identity = 0.997
3'(1.000;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;0.991;1.000;0.989;0.984;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003150 : DNA-binding RFX-type winged-helix domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
GO :
0003677 : Molecular Function : DNA binding
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 6.5, cyto_nucl 5.5, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024074)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK133372
Bos
sp. (Cow) : ENSBTAT00000048225
Canis
sp. (Dog) : ENSCAFT00000003441
Canis
sp. (Dog) : ENSCAFT00000003442
Equus
sp. (Horse) : ENSECAT00000008508
Rattus
sp. (Rat) : XM_001058869
Macaca
sp. (Macaque) : XM_001106532
Gallus
sp. (Chicken) : XM_416912
HIX0024074
HIT000561450 (
NM_001145664
)
(DNA-binding protein RFX8; Regulatory factor X 8;)
genome : 102,013,823 - 102,091,165 (77,343)
query : 1 - 1,729 (1,729/1,729)
12 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.991;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 16, nucl 10
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024074)
HIX0024074
HIT000585160 (
ENST00000481179
)
(DNA-binding protein RFX8; Regulatory factor X 8;)
genome : 102,013,823 - 102,091,165 (77,343)
query : 1 - 1,907 (1,907/1,907)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 4.5, cyto_nucl 4.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024074)
HIX0024074
HIT000358106 (
ENST00000376826
)
(DNA-binding protein RFX8; Regulatory factor X 8;)
genome : 102,013,823 - 102,090,737 (76,915)
query : 1 - 1,948 (1,948/1,948)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 15.5, nucl 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024074)
HIX0024074
HIT000493234
(
AK298610
)
(DNA-binding protein RFX8; Regulatory factor X 8;)
genome : 102,013,866 - 102,091,165 (77,300)
query : 1 - 1,686 (1,686/1,686)
12 exons
identity = 0.999
3'(1.000;0.997;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.991;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 16, nucl 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024074)
HIX0024074
HIT000526277 (
ENST00000428343
)
(DNA-binding protein RFX8; Regulatory factor X 8;)
genome : 102,013,866 - 102,091,165 (77,300)
query : 1 - 1,686 (1,686/1,686)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 16, nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024074)
HIX0024074
HIT000595731 (
ENST00000492238
)
(DNA-binding protein RFX8; Regulatory factor X 8;)
genome : 102,037,845 - 102,051,568 (13,724)
query : 1 - 774 (774/774)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 6, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024074)
HIX0024074
HIT000587955 (
ENST00000484091
)
(DNA-binding protein RFX8; Regulatory factor X 8;)
genome : 102,038,160 - 102,091,163 (53,004)
query : 1 - 530 (530/530)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 11.8333, cyto_plas 10.1667,
extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0024074)
HIX0030099
HIT000067007
(
AF086128
)
Representative transcript
(Conserved hypothetical protein.)
genome : 102,042,038 - 102,042,579 (542)
query : 1 - 543 (543/553)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 0.998
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 12, cyto 10, nucl 3, pero 3, extr 2.5,
extr_plas 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0030099)
HIX0162538
HIT000524976 (
ENST00000427042
)
(Hypothetical short protein.)
genome : 102,095,852 - 102,103,284 (7,433)
query : 1 - 390 (390/390)
3 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0162538)
HIX0002311
HIT000199200 (
NM_002285
)
(Transcription factor AF4/FMR2 family protein.)
genome : 100,163,717 - 100,759,037 (595,321)
query : 1 - 8,136 (8,136/8,153)
24 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto_nucl 17
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002311)
HIX0002311
HIT000365791 (
NM_001025108
)
(Transcription factor AF4/FMR2 family protein.)
genome : 100,163,717 - 100,722,045 (558,329)
query : 1 - 8,119 (8,119/8,136)
24 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 17, cyto 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002311)
HIX0002311
HIT000121209 (
ENST00000317233
)
(Transcription factor AF4/FMR2 family protein.)
genome : 100,163,718 - 100,759,037 (595,320)
query : 1 - 8,135 (8,135/8,135)
24 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002311)
HIX0002311
HIT000310418 (
ENST00000356421
)
(Transcription factor AF4/FMR2 family protein.)
genome : 100,163,718 - 100,722,045 (558,328)
query : 1 - 8,118 (8,118/8,118)
24 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 17, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002311)
HIX0002311
HIT000507609 (
ENST00000409579
)
(Transcription factor AF4/FMR2 family protein.)
genome : 100,167,583 - 100,722,590 (555,008)
query : 1 - 4,342 (4,342/4,342)
25 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 17, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002311)
HIX0002311
HIT000017194
(
AK092327
)
Representative transcript
(AF4/FMR2 family member 3 isoform 1.)
genome : 100,203,616 - 100,722,590 (518,975)
query : 2 - 2,899 (2,898/2,914)
16 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.995
InterPro :
IPR007797 : Transcription factor AF4/FMR2
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 16.5, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002311)
HIX0002311
HIT000492031
(
AK297407
)
(AF4/FMR2 family member 3 isoform 1.)
genome : 100,203,616 - 100,722,509 (518,894)
query : 1 - 3,075 (3,075/3,090)
16 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.995
InterPro :
IPR007797 : Transcription factor AF4/FMR2
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 16, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002311)
HIX0002311
HIT000094690
(
BC036895
)
(Transcription factor AF4/FMR2 family protein.)
genome : 100,210,299 - 100,758,971 (548,673)
query : 12 - 2,005 (1,994/2,005)
14 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.995
InterPro :
IPR007797 : Transcription factor AF4/FMR2
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 13.5, cyto 7, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002311)
HIX0002311
HIT000427511
(
AK308645
)
(AF4/FMR2 family member 3 isoform 2.)
genome : 100,343,271 - 100,722,269 (378,999)
query : 1 - 1,714 (1,714/1,714)
11 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007797 : Transcription factor AF4/FMR2
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 16, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002311)
HIX0002311
HIT000521900 (
ENST00000423966
)
(Transcription factor AF4/FMR2 family protein.)
genome : 100,623,631 - 100,759,037 (135,407)
query : 1 - 702 (702/702)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 14.5, cyto 9, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002311)
HIX0002311
HIT000539334 (
ENST00000441400
)
(Transcription factor AF4/FMR2 family protein.)
genome : 100,623,711 - 100,721,889 (98,179)
query : 1 - 543 (543/543)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 14.5, cyto 8, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002311)
HIX0002311
HIT000522534 (
ENST00000424600
)
(Transcription factor AF4/FMR2 family protein.)
genome : 100,623,755 - 100,721,801 (98,047)
query : 1 - 551 (551/551)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 14, nucl 12, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002311)
HIX0002311
HIT000514426 (
ENST00000416492
)
(Transcription factor AF4/FMR2 family protein.)
genome : 100,623,799 - 100,759,045 (135,247)
query : 1 - 545 (545/545)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 13, cyto 10, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002311)
HIX0002311
HIT000538379 (
ENST00000440445
)
(Transcription factor AF4/FMR2 family protein.)
genome : 100,623,861 - 100,722,269 (98,409)
query : 1 - 591 (591/591)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, extr 9, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002311)
HIX0002311
HIT000513318 (
ENST00000415384
)
(Conserved hypothetical protein.)
genome : 100,625,361 - 100,722,509 (97,149)
query : 1 - 574 (574/574)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, mito 10, cyto_nucl 9.16667, extr 4,
cyto_pero 2.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002311)
HIX0002311
HIT000525052 (
ENST00000427118
)
(Conserved hypothetical protein.)
genome : 100,720,864 - 100,722,509 (1,646)
query : 1 - 528 (528/528)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002311)
HIX0215180
HIT000485630 (
NM_001102426
)
(TBC1 domain family member 8; AD 3; Vascular Rab-GAP/TBC-containing protein;)
genome : 101,623,690 - 101,767,846 (144,157)
query : 1 - 4,147 (4,147/4,163)
20 exons
identity = 0.999
3'(1.000;1.000;0.957;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, nucl 6, E.R._mito 5.5, E.R. 5,
mito_pero 4.16667, plas 3.5, mito 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215180)
HIX0215180
HIT000058774
(
AB024057
)
(TBC1 domain family member 8.)
genome : 101,623,691 - 101,676,010 (52,320)
query : 430 - 4,403 (3,974/4,404)
18 exons
identity = 0.996
3'(0.997;1.000;0.957;1.000;0.996;1.000;1.000;
1.000;0.997;1.000;1.000;1.000;1.000;1.000;
0.995;1.000;0.993;0.977)5'
coverage = 0.902
InterPro :
IPR000195 : Rab-GTPase-TBC domain
IPR004182 : GRAM domain
IPR011992 : EF-hand domain pair
GO :
0005097 : Molecular Function : Rab GTPase activator activity
0005509 : Molecular Function : calcium ion binding
0032313 : Biological Process : regulation of Rab GTPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 8.83333, nucl 8.5, cyto 8, E.R. 8,
cyto_mito 5.16667, pero 4.5, E.R._golg 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215180)
HIX0215180
HIT000507350 (
ENST00000409318
)
(TBC1 domain family member 8; AD 3; Vascular Rab-GAP/TBC-containing protein;)
genome : 101,624,079 - 101,767,846 (143,768)
query : 1 - 3,803 (3,803/3,803)
20 exons
identity = 0.999
3'(1.000;1.000;0.957;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, nucl 6, E.R._mito 5.5, E.R. 5,
mito_pero 4.16667, plas 3.5, mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215180)
HIX0215180
HIT000358120 (
ENST00000376840
)
(TBC1 domain family member 8; AD 3; Vascular Rab-GAP/TBC-containing protein;)
genome : 101,624,079 - 101,767,715 (143,637)
query : 1 - 3,627 (3,627/3,627)
20 exons
identity = 0.999
3'(1.000;1.000;0.957;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, nucl 6, E.R._mito 5.5, E.R. 5,
mito_pero 4.16667, plas 3.5, mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215180)
HIX0215180
HIT000425623
(
AK292826
)
(TBC1 domain family member 8.)
genome : 101,624,079 - 101,676,002 (51,924)
query : 2 - 3,391 (3,390/3,391)
18 exons
identity = 0.998
3'(0.997;1.000;0.957;1.000;0.996;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.995;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000195 : Rab-GTPase-TBC domain
IPR004182 : GRAM domain
IPR011992 : EF-hand domain pair
GO :
0005097 : Molecular Function : Rab GTPase activator activity
0005509 : Molecular Function : calcium ion binding
0032313 : Biological Process : regulation of Rab GTPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, cyto_nucl 9.5, nucl 7.5, E.R. 7, pero 4,
E.R._golg 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215180)
HIX0215180
HIT000487405
(
AB449889
)
Representative transcript
(TBC1 domain family member 8; AD 3; Vascular Rab-GAP/TBC-containing protein;)
genome : 101,624,283 - 101,767,715 (143,433)
query : 1 - 3,423 (3,423/3,423)
20 exons
identity = 0.999
3'(1.000;1.000;0.957;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.995;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000195 : Rab-GTPase-TBC domain
IPR004182 : GRAM domain
IPR011992 : EF-hand domain pair
GO :
0005097 : Molecular Function : Rab GTPase activator activity
0005509 : Molecular Function : calcium ion binding
0032313 : Biological Process : regulation of Rab GTPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, nucl 6, E.R._mito 5.5, E.R. 5,
mito_pero 4.16667, plas 3.5, mito 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215180)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK141520
Bos
sp. (Cow) : BC149600
Gallus
sp. (Chicken) : BX929768
Oryzias
sp. (Medaka) : ENSORLT00000011750
Pongo
sp. (Orangutan) : ENSPPYT00000014042
Tetraodon
sp. (Tetraodon) : GSTENT00029191001
Takifugu
sp. (Fugu) : SINFRUT00000133145
Rattus
sp. (Rat) : XM_001055799
Macaca
sp. (Macaque) : XM_001106300
Pan
sp. (Chimpanzee) : XM_001162070
Monodelphis
sp. (Opossum) : XM_001369738
Equus
sp. (Horse) : XM_001491882
Canis
sp. (Dog) : XM_531780
Danio
sp. (Zebrafish) : XM_690053
HIX0215180
HIT000058501
(
AB017114
)
(TBC1 domain family member 8.)
genome : 101,627,435 - 101,666,948 (39,514)
query : 1 - 2,185 (2,185/2,201)
15 exons
identity = 0.996
3'(0.981;0.957;1.000;0.996;1.000;1.000;1.000;
0.997;1.000;1.000;1.000;1.000;1.000;0.995;
1.000)5'
coverage = 1.000
InterPro :
IPR000195 : Rab-GTPase-TBC domain
IPR004182 : GRAM domain
IPR011992 : EF-hand domain pair
GO :
0005097 : Molecular Function : Rab GTPase activator activity
0005509 : Molecular Function : calcium ion binding
0032313 : Biological Process : regulation of Rab GTPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, nucl 12, cyto_mito 7, plas 3.5,
extr_plas 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0215180)
HIX0002324
eHIT000014065 ( ESTsASS_2_166 )
(Non-protein coding transcript.)
genome : 101,624,021 - 101,767,844 (143,824)
query : 1 - 3,859 (3,859/3,859)
20 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0002324)
ESTs used for assembly :
AW388196,BG419020,DC418385,DA428506
CD722231,BE772857,CR739061,DA678681
BP291834,AI906348,DA182581,BQ673509
CD623627,AI077460,BF734569,BE837734
CN354821,DB018245,DC422300,DB003829
DB079019,CD623625,AA308661,DW450151
DC415735
AC010736.13
100500001-100548892 F +
NCBI
AC114793.5
100548893-100558976 F +
NCBI
AC133108.3
100558977-100588791 F +
NCBI
AC092667.3
100588792-100759365 F +
NCBI
AC104782.5
100759366-100907375 F +
NCBI
AC012493.9
100907376-101075779 F +
NCBI
AC068538.8
101075780-101246949 F +
NCBI
AC092845.6
101246950-101291466 F +
NCBI
AC092168.4
101291467-101491337 F +
NCBI
AC106891.3
101491338-101524189 F +
NCBI
AC016738.6
101524190-101705478 F +
NCBI
AC013722.8
101705479-101911054 F +
NCBI
AC073643.3
101911055-101953225 F +
NCBI
AC099797.6
101953226-101990117 F +
NCBI
AC092570.3
101990118-102100000 F +
NCBI