Clickable map CGI

HIX0014556
HIT000648825 ( GU557064 )
  (Similar to Basigin; 5F7; Collagenase stimulatory factor; Extracellular matrix metalloproteinase inducer; EMMPRIN; Leukocyte activation antigen M6; OK blood group antigen; Tumor cell-derived collagenase stimulatory factor; TCSF; AltName: CD_antigen=CD147; Precursor;)
  genome : 571,310 - 583,493 (12,184)
  query : 1 - 1,762 (1,762/1,781)
  8 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000)3'
  coverage = 1.000
  InterPro :
    IPR003599 : Immunoglobulin subtype
    IPR007110 : Immunoglobulin-like
    IPR009151 : Basigin
    IPR013098 : Immunoglobulin I-set
    IPR013783 : Immunoglobulin-like fold
  GO :
    0005515 : Molecular Function : protein binding
    0016020 : Cellular Component : membrane
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    mito 14.5, cyto_mito 9, nucl 7, pero 4, plas 2.5,
    cyto 2.5, extr_plas 2.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

HIX0014556
HIT000644552 ( ENST00000545507 )
  (Similar to Basigin; 5F7; Collagenase stimulatory factor; Extracellular matrix metalloproteinase inducer; EMMPRIN; Leukocyte activation antigen M6; OK blood group antigen; Tumor cell-derived collagenase stimulatory factor; TCSF; AltName: CD_antigen=CD147; Precursor;)
  genome : 571,310 - 583,492 (12,183)
  query : 1 - 1,761 (1,761/1,761)
  8 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000)3'
  coverage = 1.000
  InterPro :
    IPR003599 : Immunoglobulin subtype
    IPR007110 : Immunoglobulin-like
    IPR009151 : Basigin
    IPR013098 : Immunoglobulin I-set
    IPR013783 : Immunoglobulin-like fold
  GO :
    0005515 : Molecular Function : protein binding
    0016020 : Cellular Component : membrane
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    mito 14.5, cyto_mito 9, nucl 7, pero 4, plas 2.5,
    cyto 2.5, extr_plas 2.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

HIX0014556
HIT000319444 ( NM_198591 )
  (Basigin isoform 4.)
  genome : 571,325 - 583,493 (12,169)
  query : 1 - 1,590 (1,590/1,609)
  7 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  InterPro :
    IPR003599 : Immunoglobulin subtype
    IPR007110 : Immunoglobulin-like
    IPR009151 : Basigin
    IPR013098 : Immunoglobulin I-set
    IPR013783 : Immunoglobulin-like fold
  GO :
    0005515 : Molecular Function : protein binding
    0016020 : Cellular Component : membrane
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 15, nucl 5, cyto 4, E.R. 4, mito_nucl 4
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

HIX0014556
HIT000307375 ( ENST00000346916 )
  (Basigin isoform 4.)
  genome : 571,325 - 583,492 (12,168)
  query : 1 - 1,589 (1,589/1,589)
  7 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  InterPro :
    IPR003599 : Immunoglobulin subtype
    IPR007110 : Immunoglobulin-like
    IPR009151 : Basigin
    IPR013098 : Immunoglobulin I-set
    IPR013783 : Immunoglobulin-like fold
  GO :
    0005515 : Molecular Function : protein binding
    0016020 : Cellular Component : membrane
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 15, nucl 5, cyto 4, E.R. 4, mito_nucl 4
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

HIX0014556
HIT000198665 ( NM_001728 )
  (Basigin isoform 1 precursor.)
  genome : 572,537 - 583,493 (10,957)
  query : 1 - 2,005 (2,005/2,024)
  9 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000)3'
  coverage = 1.000
  InterPro :
    IPR003598 : Immunoglobulin subtype 2
    IPR003599 : Immunoglobulin subtype
    IPR007110 : Immunoglobulin-like
    IPR013098 : Immunoglobulin I-set
    IPR013783 : Immunoglobulin-like fold
  GO :
    0005515 : Molecular Function : protein binding
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    E.R. 13, plas 12, pero 3, extr 2, lyso 2
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

HIX0014556
HIT000319442 ( NM_198589 )
  (Basigin isoform 2 precursor.)
  genome : 572,537 - 583,493 (10,957)
  query : 1 - 1,657 (1,657/1,676)
  8 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000)3'
  coverage = 1.000
  InterPro :
    IPR003599 : Immunoglobulin subtype
    IPR007110 : Immunoglobulin-like
    IPR009151 : Basigin
    IPR013098 : Immunoglobulin I-set
    IPR013783 : Immunoglobulin-like fold
  GO :
    0005515 : Molecular Function : protein binding
    0016020 : Cellular Component : membrane
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 10.5, extr_plas 10.5, E.R. 10, plas 7.5
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

HIX0014556
HIT000128395 ( ENST00000333511 )
  (Basigin isoform 1 precursor.)
  genome : 572,537 - 583,492 (10,956)
  query : 1 - 2,004 (2,004/2,004)
  9 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000)3'
  coverage = 1.000
  InterPro :
    IPR003598 : Immunoglobulin subtype 2
    IPR003599 : Immunoglobulin subtype
    IPR007110 : Immunoglobulin-like
    IPR013098 : Immunoglobulin I-set
    IPR013783 : Immunoglobulin-like fold
  GO :
    0005515 : Molecular Function : protein binding
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    E.R. 13, plas 12, pero 3, extr 2, lyso 2
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

HIX0014556
HIT000308414 ( ENST00000353555 )
  (Basigin isoform 2 precursor.)
  genome : 572,537 - 583,492 (10,956)
  query : 1 - 1,656 (1,656/1,656)
  8 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000)3'
  coverage = 1.000
  InterPro :
    IPR003599 : Immunoglobulin subtype
    IPR007110 : Immunoglobulin-like
    IPR009151 : Basigin
    IPR013098 : Immunoglobulin I-set
    IPR013783 : Immunoglobulin-like fold
  GO :
    0005515 : Molecular Function : protein binding
    0016020 : Cellular Component : membrane
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 10.5, extr_plas 10.5, E.R. 10, plas 7.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

HIX0014556
HIT000496855 ( AK302231 )
  (Basigin isoform 2 precursor.)
  genome : 572,565 - 583,352 (10,788)
  query : 1 - 1,467 (1,467/1,467)
  8 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000)3'
  coverage = 1.000
  InterPro :
    IPR003599 : Immunoglobulin subtype
    IPR007110 : Immunoglobulin-like
    IPR009151 : Basigin
    IPR013098 : Immunoglobulin I-set
    IPR013783 : Immunoglobulin-like fold
  GO :
    0005515 : Molecular Function : protein binding
    0016020 : Cellular Component : membrane
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr_plas 10.5, E.R. 10, extr 9.5, plas 8.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

HIX0014556
HIT000081513 ( AF548371 )
  (Basigin isoform 1 precursor.)
  genome : 572,575 - 583,256 (10,682)
  query : 1 - 1,730 (1,730/1,730)
  9 exons
  identity = 0.999
  5'(1.000;1.000;1.000;1.000;0.993;1.000;1.000;
      1.000;0.998)3'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    E.R. 13, plas 12, pero 3, extr 2, lyso 2
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

HIX0014556
HIT000322688 ( X64364 )
  (Basigin isoform 2 precursor.)
  genome : 572,578 - 583,493 (10,916)
  query : 1 - 1,616 (1,616/1,638)
  8 exons
  identity = 0.998
  5'(1.000;1.000;1.000;0.993;1.000;1.000;1.000;
      0.997)3'
  coverage = 1.000
  InterPro :
    IPR003599 : Immunoglobulin subtype
    IPR007110 : Immunoglobulin-like
    IPR009151 : Basigin
    IPR013098 : Immunoglobulin I-set
    IPR013783 : Immunoglobulin-like fold
  GO :
    0005515 : Molecular Function : protein binding
    0016020 : Cellular Component : membrane
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 10.5, extr_plas 10.5, E.R. 10, plas 7.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

HIX0014556
HIT000301824 ( CR622629 )
  (Basigin isoform 2 precursor.)
  genome : 572,579 - 583,442 (10,864)
  query : 1 - 1,555 (1,555/1,555)
  7 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  InterPro :
    IPR003599 : Immunoglobulin subtype
    IPR007110 : Immunoglobulin-like
    IPR009151 : Basigin
    IPR013098 : Immunoglobulin I-set
    IPR013783 : Immunoglobulin-like fold
  GO :
    0005515 : Molecular Function : protein binding
    0016020 : Cellular Component : membrane
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr_plas 10.5, E.R. 10, plas 9.5, extr 8.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

HIX0014556
HIT000298440 ( CR619245 )
  (Basigin isoform 2 precursor.)
  genome : 572,579 - 583,358 (10,780)
  query : 1 - 1,480 (1,480/1,480)
  8 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000)3'
  coverage = 1.000
  InterPro :
    IPR003599 : Immunoglobulin subtype
    IPR007110 : Immunoglobulin-like
    IPR009151 : Basigin
    IPR013098 : Immunoglobulin I-set
    IPR013783 : Immunoglobulin-like fold
  GO :
    0005515 : Molecular Function : protein binding
    0016020 : Cellular Component : membrane
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 10.5, extr_plas 10.5, E.R. 10, plas 7.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

HIX0014556
HIT000252158 ( AY358113 )
  (Basigin isoform 1 precursor.)
  genome : 572,583 - 583,490 (10,908)
  query : 1 - 1,956 (1,956/1,961)
  9 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000)3'
  coverage = 0.997
  InterPro :
    IPR003598 : Immunoglobulin subtype 2
    IPR003599 : Immunoglobulin subtype
    IPR007110 : Immunoglobulin-like
    IPR013098 : Immunoglobulin I-set
    IPR013783 : Immunoglobulin-like fold
  GO :
    0005515 : Molecular Function : protein binding
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    E.R. 13, plas 12, pero 3, extr 2, lyso 2
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

HIX0014556
HIT000303181 ( CR623986 )
  (Basigin isoform 2 precursor.)
  genome : 572,590 - 583,473 (10,884)
  query : 1 - 1,584 (1,584/1,584)
  8 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000)3'
  coverage = 1.000
  InterPro :
    IPR003599 : Immunoglobulin subtype
    IPR007110 : Immunoglobulin-like
    IPR009151 : Basigin
    IPR013098 : Immunoglobulin I-set
    IPR013783 : Immunoglobulin-like fold
  GO :
    0005515 : Molecular Function : protein binding
    0016020 : Cellular Component : membrane
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 10.5, extr_plas 10.5, E.R. 10, plas 7.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

HIX0014556
HIT000277027 ( CR597832 )
  (Basigin isoform 2 precursor.)
  genome : 572,590 - 583,470 (10,881)
  query : 1 - 1,574 (1,574/1,574)
  7 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  InterPro :
    IPR003599 : Immunoglobulin subtype
    IPR007110 : Immunoglobulin-like
    IPR009151 : Basigin
    IPR013098 : Immunoglobulin I-set
    IPR013783 : Immunoglobulin-like fold
  GO :
    0005515 : Molecular Function : protein binding
    0016020 : Cellular Component : membrane
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 13.5, extr_plas 11.5, E.R. 9, extr 6.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

HIX0014556
HIT000298433 ( CR619238 )
  (Basigin isoform 2 precursor.)
  genome : 572,590 - 583,466 (10,877)
  query : 1 - 1,567 (1,567/1,567)
  8 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000)3'
  coverage = 1.000
  InterPro :
    IPR003599 : Immunoglobulin subtype
    IPR007110 : Immunoglobulin-like
    IPR009151 : Basigin
    IPR013098 : Immunoglobulin I-set
    IPR013783 : Immunoglobulin-like fold
  GO :
    0005515 : Molecular Function : protein binding
    0016020 : Cellular Component : membrane
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 13, extr_plas 10.5, E.R. 10, extr 6
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

HIX0014556
HIT000291059 ( CR611864 )
  (Basigin isoform 2 precursor.)
  genome : 572,590 - 583,465 (10,876)
  query : 1 - 1,576 (1,576/1,576)
  8 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000)3'
  coverage = 1.000
  InterPro :
    IPR003599 : Immunoglobulin subtype
    IPR007110 : Immunoglobulin-like
    IPR009151 : Basigin
    IPR013098 : Immunoglobulin I-set
    IPR013783 : Immunoglobulin-like fold
  GO :
    0005515 : Molecular Function : protein binding
    0016020 : Cellular Component : membrane
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 10.5, extr_plas 10.5, E.R. 10, plas 7.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

HIX0014556
HIT000281882 ( CR602687 )
  (Basigin isoform 2 precursor.)
  genome : 572,590 - 583,458 (10,869)
  query : 1 - 1,569 (1,569/1,569)
  8 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000)3'
  coverage = 1.000
  InterPro :
    IPR003599 : Immunoglobulin subtype
    IPR007110 : Immunoglobulin-like
    IPR009151 : Basigin
    IPR013098 : Immunoglobulin I-set
    IPR013783 : Immunoglobulin-like fold
  GO :
    0005515 : Molecular Function : protein binding
    0016020 : Cellular Component : membrane
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 10.5, extr_plas 10.5, E.R. 10, plas 7.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

HIX0014556
HIT000034150 ( BC009040 )
  (Basigin isoform 2 precursor.)
  genome : 572,591 - 583,493 (10,903)
  query : 1 - 1,603 (1,603/1,622)
  8 exons
  identity = 0.998
  5'(1.000;0.994;0.988;1.000;1.000;1.000;1.000;
      0.997)3'
  coverage = 1.000
  InterPro :
    IPR003599 : Immunoglobulin subtype
    IPR007110 : Immunoglobulin-like
    IPR009151 : Basigin
    IPR013098 : Immunoglobulin I-set
    IPR013783 : Immunoglobulin-like fold
  GO :
    0005515 : Molecular Function : protein binding
    0016020 : Cellular Component : membrane
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 10.5, extr_plas 10.5, E.R. 10, plas 7.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

HIX0014556
HIT000192422 ( L20471 )
  (Basigin isoform 2 precursor.)
  genome : 572,597 - 583,376 (10,780)
  query : 3 - 1,488 (1,486/1,490)
  8 exons
  identity = 0.993
  5'(0.955;0.994;1.000;0.993;0.996;1.000;1.000;
      0.995)3'
  coverage = 0.997
  InterPro :
    IPR003599 : Immunoglobulin subtype
    IPR007110 : Immunoglobulin-like
    IPR009151 : Basigin
    IPR013098 : Immunoglobulin I-set
    IPR013783 : Immunoglobulin-like fold
  GO :
    0005515 : Molecular Function : protein binding
    0016020 : Cellular Component : membrane
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 10.5, extr_plas 10.5, E.R. 10, plas 7.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

HIX0014556
HIT000491482 ( AK296858 )
  (Similar to Basigin; 5F7; Collagenase stimulatory factor; Extracellular matrix metalloproteinase inducer; EMMPRIN; Leukocyte activation antigen M6; OK blood group antigen; Tumor cell-derived collagenase stimulatory factor; TCSF; AltName: CD_antigen=CD147; Precursor;)
  genome : 572,596 - 583,360 (10,765)
  query : 1 - 1,120 (1,120/1,120)
  6 exons
  identity = 0.996
  5'(1.000;0.988;0.986;1.000;1.000;0.998)3'
  coverage = 1.000
  InterPro :
    IPR009151 : Basigin
  GO :
    0016020 : Cellular Component : membrane
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    E.R. 15, extr 10, plas 6
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

HIX0014556
HIT000492504 ( AK297880 )
  (Similar to Basigin isoform 2 precursor.)
  genome : 572,596 - 583,015 (10,420)
  query : 1 - 1,468 (1,468/1,468)
  9 exons
  identity = 0.998
  5'(1.000;1.000;1.000;1.000;0.993;1.000;1.000;
      1.000;0.992)3'
  coverage = 1.000
  InterPro :
    IPR003598 : Immunoglobulin subtype 2
    IPR003599 : Immunoglobulin subtype
    IPR007110 : Immunoglobulin-like
    IPR013098 : Immunoglobulin I-set
    IPR013783 : Immunoglobulin-like fold
  GO :
    0005515 : Molecular Function : protein binding
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 13, E.R. 13, pero 3
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

HIX0014556
HIT000061433 ( AB085790 )
  (Similar to Basigin; 5F7; Collagenase stimulatory factor; Extracellular matrix metalloproteinase inducer; EMMPRIN; Leukocyte activation antigen M6; OK blood group antigen; Tumor cell-derived collagenase stimulatory factor; TCSF; AltName: CD_antigen=CD147; Precursor;)
  genome : 572,596 - 582,867 (10,272)
  query : 1 - 972 (972/972)
  8 exons
  identity = 0.999
  5'(1.000;1.000;1.000;1.000;0.996;1.000;1.000;
      1.000)3'
  coverage = 1.000
  InterPro :
    IPR003599 : Immunoglobulin subtype
    IPR007110 : Immunoglobulin-like
    IPR009151 : Basigin
    IPR013098 : Immunoglobulin I-set
    IPR013783 : Immunoglobulin-like fold
  GO :
    0005515 : Molecular Function : protein binding
    0016020 : Cellular Component : membrane
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr_plas 11, E.R. 10, plas 9.5, extr 9.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

HIX0014556
HIT000101270 ( D28441 )
  (Non-protein coding transcript.)
  genome : 572,597 - 572,640 (44)
  query : 1 - 44 (44/44)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

HIX0014556
HIT000293617 ( CR614422 )
  (Basigin isoform 2 precursor.)
  genome : 572,603 - 582,871 (10,269)
  query : 1 - 969 (969/969)
  8 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000)3'
  coverage = 1.000
  InterPro :
    IPR003599 : Immunoglobulin subtype
    IPR007110 : Immunoglobulin-like
    IPR009151 : Basigin
    IPR013098 : Immunoglobulin I-set
    IPR013783 : Immunoglobulin-like fold
  GO :
    0005515 : Molecular Function : protein binding
    0016020 : Cellular Component : membrane
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 10.5, extr_plas 10.5, E.R. 10, plas 7.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

HIX0014556
HIT000101486 ( D45131 )
  (Basigin isoform 2 precursor.)
  genome : 572,606 - 583,487 (10,882)
  query : 1 - 1,581 (1,581/1,586)
  8 exons
  identity = 0.997
  5'(1.000;1.000;1.000;0.993;1.000;1.000;1.000;
      0.996)3'
  coverage = 0.997
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 10.5, extr_plas 10.5, E.R. 10, plas 7.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

HIX0014556
HIT000479369 ( ENST00000396012 )
  (Similar to Basigin; 5F7; Collagenase stimulatory factor; Extracellular matrix metalloproteinase inducer; EMMPRIN; Leukocyte activation antigen M6; OK blood group antigen; Tumor cell-derived collagenase stimulatory factor; TCSF; AltName: CD_antigen=CD147; Precursor;)
  genome : 572,606 - 583,487 (10,882)
  query : 1 - 1,237 (1,237/1,237)
  6 exons
  identity = 0.998
  5'(1.000;1.000;0.981;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    E.R. 15, extr 10, plas 6
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

HIX0014556
HIT000279821 ( CR600626 )
  (Basigin isoform 2 precursor.)
  genome : 572,606 - 583,452 (10,847)
  query : 1 - 1,547 (1,547/1,547)
  8 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000)3'
  coverage = 1.000
  InterPro :
    IPR003599 : Immunoglobulin subtype
    IPR007110 : Immunoglobulin-like
    IPR009151 : Basigin
    IPR013098 : Immunoglobulin I-set
    IPR013783 : Immunoglobulin-like fold
  GO :
    0005515 : Molecular Function : protein binding
    0016020 : Cellular Component : membrane
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 10.5, extr_plas 10.5, E.R. 10, plas 7.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

HIX0014556
HIT000290600 ( CR611405 )
  (Similar to Basigin; 5F7; Collagenase stimulatory factor; Extracellular matrix metalloproteinase inducer; EMMPRIN; Leukocyte activation antigen M6; OK blood group antigen; Tumor cell-derived collagenase stimulatory factor; TCSF; AltName: CD_antigen=CD147; Precursor;)
  genome : 572,608 - 583,471 (10,864)
  query : 1 - 1,460 (1,460/1,460)
  6 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  InterPro :
    IPR003599 : Immunoglobulin subtype
    IPR007110 : Immunoglobulin-like
    IPR009151 : Basigin
    IPR013098 : Immunoglobulin I-set
    IPR013783 : Immunoglobulin-like fold
  GO :
    0005515 : Molecular Function : protein binding
    0016020 : Cellular Component : membrane
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 12.5, extr_plas 11.5, E.R. 8, extr 7.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

HIX0014556
HIT000274851 ( CR595656 )
  (Basigin isoform 2 precursor.)
  genome : 572,608 - 583,135 (10,528)
  query : 1 - 1,228 (1,228/1,228)
  8 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000)3'
  coverage = 1.000
  InterPro :
    IPR003599 : Immunoglobulin subtype
    IPR007110 : Immunoglobulin-like
    IPR009151 : Basigin
    IPR013098 : Immunoglobulin I-set
    IPR013783 : Immunoglobulin-like fold
  GO :
    0005515 : Molecular Function : protein binding
    0016020 : Cellular Component : membrane
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 10.5, extr_plas 10.5, E.R. 10, plas 7.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

HIX0014556
HIT000291124 ( CR611929 )
  (Basigin isoform 2 precursor.)
  genome : 572,611 - 583,308 (10,698)
  query : 1 - 1,398 (1,398/1,398)
  8 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000)3'
  coverage = 1.000
  InterPro :
    IPR003599 : Immunoglobulin subtype
    IPR007110 : Immunoglobulin-like
    IPR009151 : Basigin
    IPR013098 : Immunoglobulin I-set
    IPR013783 : Immunoglobulin-like fold
  GO :
    0005515 : Molecular Function : protein binding
    0016020 : Cellular Component : membrane
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 10.5, extr_plas 10.5, E.R. 10, plas 7.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

HIX0014556
HIT000305203 ( CR626008 )
  (Basigin isoform 2 precursor.)
  genome : 572,611 - 583,237 (10,627)
  query : 1 - 1,327 (1,327/1,327)
  8 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000)3'
  coverage = 1.000
  InterPro :
    IPR003599 : Immunoglobulin subtype
    IPR007110 : Immunoglobulin-like
    IPR009151 : Basigin
    IPR013098 : Immunoglobulin I-set
    IPR013783 : Immunoglobulin-like fold
  GO :
    0005515 : Molecular Function : protein binding
    0016020 : Cellular Component : membrane
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 10.5, extr_plas 10.5, E.R. 10, plas 7.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

HIX0014556
HIT000196689 ( M87879 )
  (Basigin isoform 2 precursor.)
  genome : 572,629 - 583,489 (10,861)
  query : 17 - 1,579 (1,563/1,584)
  8 exons
  identity = 0.995
  5'(1.000;1.000;1.000;0.993;1.000;1.000;1.000;
      0.991)3'
  coverage = 0.987
  InterPro :
    IPR003599 : Immunoglobulin subtype
    IPR007110 : Immunoglobulin-like
    IPR009151 : Basigin
    IPR013098 : Immunoglobulin I-set
    IPR013783 : Immunoglobulin-like fold
  GO :
    0005515 : Molecular Function : protein binding
    0016020 : Cellular Component : membrane
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 10.5, extr_plas 10.5, E.R. 10, plas 7.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

HIX0014556
HIT000270892 ( CR591697 )
  (Basigin isoform 2 precursor.)
  genome : 572,613 - 583,460 (10,848)
  query : 1 - 1,548 (1,548/1,548)
  8 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000)3'
  coverage = 1.000
  InterPro :
    IPR003599 : Immunoglobulin subtype
    IPR007110 : Immunoglobulin-like
    IPR009151 : Basigin
    IPR013098 : Immunoglobulin I-set
    IPR013783 : Immunoglobulin-like fold
  GO :
    0005515 : Molecular Function : protein binding
    0016020 : Cellular Component : membrane
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 10.5, extr_plas 10.5, E.R. 10, plas 7.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

HIX0014556
HIT000271193 ( CR591998 )
  (Basigin isoform 2 precursor.)
  genome : 572,613 - 583,459 (10,847)
  query : 1 - 1,547 (1,547/1,547)
  8 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000)3'
  coverage = 1.000
  InterPro :
    IPR003599 : Immunoglobulin subtype
    IPR007110 : Immunoglobulin-like
    IPR009151 : Basigin
    IPR013098 : Immunoglobulin I-set
    IPR013783 : Immunoglobulin-like fold
  GO :
    0005515 : Molecular Function : protein binding
    0016020 : Cellular Component : membrane
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 10.5, extr_plas 10.5, E.R. 10, plas 7.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

HIX0014556
HIT000288895 ( CR609700 )
  (Basigin isoform 2 precursor.)
  genome : 572,613 - 583,448 (10,836)
  query : 1 - 1,536 (1,536/1,536)
  8 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000)3'
  coverage = 1.000
  InterPro :
    IPR003599 : Immunoglobulin subtype
    IPR007110 : Immunoglobulin-like
    IPR009151 : Basigin
    IPR013098 : Immunoglobulin I-set
    IPR013783 : Immunoglobulin-like fold
  GO :
    0005515 : Molecular Function : protein binding
    0016020 : Cellular Component : membrane
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 10.5, extr_plas 10.5, E.R. 10, plas 7.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

HIX0014556
HIT000288753 ( CR609558 )
  (Basigin isoform 2 precursor.)
  genome : 572,613 - 583,435 (10,823)
  query : 1 - 1,523 (1,523/1,523)
  8 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000)3'
  coverage = 1.000
  InterPro :
    IPR003599 : Immunoglobulin subtype
    IPR007110 : Immunoglobulin-like
    IPR009151 : Basigin
    IPR013098 : Immunoglobulin I-set
    IPR013783 : Immunoglobulin-like fold
  GO :
    0005515 : Molecular Function : protein binding
    0016020 : Cellular Component : membrane
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 10.5, extr_plas 10.5, E.R. 10, plas 7.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

HIX0014556
HIT000294750 ( CR615555 )
  (Basigin isoform 2 precursor.)
  genome : 572,614 - 583,459 (10,846)
  query : 1 - 1,546 (1,546/1,546)
  8 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000)3'
  coverage = 1.000
  InterPro :
    IPR003599 : Immunoglobulin subtype
    IPR007110 : Immunoglobulin-like
    IPR009151 : Basigin
    IPR013098 : Immunoglobulin I-set
    IPR013783 : Immunoglobulin-like fold
  GO :
    0005515 : Molecular Function : protein binding
    0016020 : Cellular Component : membrane
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 10.5, extr_plas 10.5, E.R. 10, plas 7.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

HIX0014556
HIT000281057 ( CR601862 )
  (Basigin isoform 2 precursor.)
  genome : 572,614 - 583,451 (10,838)
  query : 1 - 1,538 (1,538/1,538)
  8 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000)3'
  coverage = 1.000
  InterPro :
    IPR003599 : Immunoglobulin subtype
    IPR007110 : Immunoglobulin-like
    IPR009151 : Basigin
    IPR013098 : Immunoglobulin I-set
    IPR013783 : Immunoglobulin-like fold
  GO :
    0005515 : Molecular Function : protein binding
    0016020 : Cellular Component : membrane
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 10.5, extr_plas 10.5, E.R. 10, plas 7.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

HIX0014556
HIT000192009 ( L10240 )
  (Basigin isoform 2 precursor.)
  genome : 572,621 - 583,486 (10,866)
  query : 1 - 1,566 (1,566/1,566)
  8 exons
  identity = 0.997
  5'(1.000;1.000;1.000;1.000;0.996;1.000;1.000;
      0.996)3'
  coverage = 1.000
  InterPro :
    IPR003599 : Immunoglobulin subtype
    IPR007110 : Immunoglobulin-like
    IPR009151 : Basigin
    IPR013098 : Immunoglobulin I-set
    IPR013783 : Immunoglobulin-like fold
  GO :
    0005515 : Molecular Function : protein binding
    0016020 : Cellular Component : membrane
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 10.5, extr_plas 10.5, E.R. 10, plas 7.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

HIX0014556
HIT000061213 ( AB072923 )
  (Basigin isoform 2 precursor.)
  genome : 572,621 - 582,577 (9,957)
  query : 1 - 824 (824/824)
  7 exons
  identity = 0.996
  5'(1.000;1.000;0.988;0.993;0.996;1.000;1.000)3'
  coverage = 1.000
  InterPro :
    IPR003599 : Immunoglobulin subtype
    IPR007110 : Immunoglobulin-like
    IPR009151 : Basigin
    IPR013098 : Immunoglobulin I-set
    IPR013783 : Immunoglobulin-like fold
  GO :
    0005515 : Molecular Function : protein binding
    0016020 : Cellular Component : membrane
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr_plas 10.5, E.R. 10, plas 9.5, extr 8.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

HIX0014556
HIT000061482 ( AB091680 )
  (Basigin isoform 2 precursor.)
  genome : 572,626 - 582,577 (9,952)
  query : 1 - 819 (819/819)
  7 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  InterPro :
    IPR003599 : Immunoglobulin subtype
    IPR007110 : Immunoglobulin-like
    IPR009151 : Basigin
    IPR013098 : Immunoglobulin I-set
    IPR013783 : Immunoglobulin-like fold
  GO :
    0005515 : Molecular Function : protein binding
    0016020 : Cellular Component : membrane
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 10.5, extr_plas 10.5, E.R. 10, plas 7.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

HIX0014556
HIT000020767 ( AK095912 )
  (Similar to Basigin isoform 2 precursor.)
  genome : 578,848 - 583,492 (4,645)
  query : 13 - 2,155 (2,143/2,155)
  7 exons
  identity = 0.999
  5'(0.999;1.000;1.000;1.000;1.000;1.000;0.999)3'
  coverage = 0.994
  InterPro :
    IPR003599 : Immunoglobulin subtype
    IPR007110 : Immunoglobulin-like
    IPR009151 : Basigin
    IPR013098 : Immunoglobulin I-set
    IPR013783 : Immunoglobulin-like fold
  GO :
    0005515 : Molecular Function : protein binding
    0016020 : Cellular Component : membrane
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    mito 11, nucl 9, plas 4, pero 4, cyto 2, lyso 2,
    extr_plas 2, cysk_plas 2
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

HIX0014556
HIT000275887 ( CR596692 )
  (Similar to Basigin; 5F7; Collagenase stimulatory factor; Extracellular matrix metalloproteinase inducer; EMMPRIN; Leukocyte activation antigen M6; OK blood group antigen; Tumor cell-derived collagenase stimulatory factor; TCSF; AltName: CD_antigen=CD147; Precursor;)
  genome : 579,625 - 583,458 (3,834)
  query : 1 - 1,332 (1,332/1,332)
  7 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  InterPro :
    IPR003599 : Immunoglobulin subtype
    IPR007110 : Immunoglobulin-like
    IPR009151 : Basigin
    IPR013098 : Immunoglobulin I-set
    IPR013783 : Immunoglobulin-like fold
  GO :
    0005515 : Molecular Function : protein binding
    0016020 : Cellular Component : membrane
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 15, nucl 6, cyto 5.5, cyto_mito 4.5, mito 2.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

HIX0014556
HIT000295574 ( CR616379 )
  (Similar to Basigin; 5F7; Collagenase stimulatory factor; Extracellular matrix metalloproteinase inducer; EMMPRIN; Leukocyte activation antigen M6; OK blood group antigen; Tumor cell-derived collagenase stimulatory factor; TCSF; AltName: CD_antigen=CD147; Precursor;)
  genome : 580,734 - 583,473 (2,740)
  query : 1 - 1,144 (1,144/1,144)
  5 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  InterPro :
    IPR007110 : Immunoglobulin-like
    IPR013783 : Immunoglobulin-like fold
  GO :
    0005515 : Molecular Function : protein binding
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 11.5, cyto 8, extr_plas 6.5, mito 4, E.R. 4,
    E.R._mito 4, cyto_pero 4
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

HIX0014556
HIT000276479 ( CR597284 )
  (Similar to Basigin; 5F7; Collagenase stimulatory factor; Extracellular matrix metalloproteinase inducer; EMMPRIN; Leukocyte activation antigen M6; OK blood group antigen; Tumor cell-derived collagenase stimulatory factor; TCSF; AltName: CD_antigen=CD147; Precursor;)
  genome : 580,760 - 583,468 (2,709)
  query : 1 - 1,113 (1,113/1,113)
  5 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  InterPro :
    IPR013783 : Immunoglobulin-like fold
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 11, cyto 7.5, cyto_mito 7, mito 5.5,
    cysk_plas 5.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

HIX0014556
HIT000282637 ( CR603442 )
  (Similar to Basigin; 5F7; Collagenase stimulatory factor; Extracellular matrix metalloproteinase inducer; EMMPRIN; Leukocyte activation antigen M6; OK blood group antigen; Tumor cell-derived collagenase stimulatory factor; TCSF; AltName: CD_antigen=CD147; Precursor;)
  genome : 581,357 - 583,477 (2,121)
  query : 1 - 1,057 (1,057/1,057)
  4 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  InterPro :
    IPR013783 : Immunoglobulin-like fold
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 26, nucl 2, cyto 2, E.R. 2, cyto_nucl 2
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

HIX0014556
HIT000275120 ( CR595925 )
  (Similar to Basigin; 5F7; Collagenase stimulatory factor; Extracellular matrix metalloproteinase inducer; EMMPRIN; Leukocyte activation antigen M6; OK blood group antigen; Tumor cell-derived collagenase stimulatory factor; TCSF; AltName: CD_antigen=CD147; Precursor;)
  genome : 581,526 - 583,493 (1,968)
  query : 1 - 904 (904/904)
  4 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 31
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0014556)

bases per tick : kb first site :
main : All Human Genes JIGSAW prediction ESTs assembly
homology : UCSC CCDS Pseudogene.org Conserved regions ( Segmental duplication P.troglodytes P.abelii M.mulatta M.musculus R.norvegicus C.familiaris E.caballus B.taurus M.domestica G.gallus D.rerio O.latipes T.nigroviridis T.rubripes )
gene prediction : FGENESH GenScan HMMgene tRNA
show... : SNPs ESTs(summary) ESTs(detail) CAGE tag(summary) CAGE tag(detail)
sequence viewer : = ( , )