Clickable map CGI

HIX0015392
HIT000562421 ( NR_024181 )
  (Krueppel-associated box domain containing protein.)
  genome : 52,359,056 - 52,391,189 (32,134)
  query : 1 - 938 (938/988)
  8 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000)5'
  coverage = 1.000
  InterPro :
    IPR001909 : Krueppel-associated box
  GO :
    0003676 : Molecular Function : nucleic acid binding
    0005622 : Cellular Component : intracellular
    0006355 : Biological Process : regulation of transcription, DNA-dependent
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto_nucl 16, cyto 13.5, nucl 11.5, extr 6
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0015392)

HIX0015392
HIT000093850 ( BC035367 )
  (Similar to Uncharacterized protein; Fragment;)
  genome : 52,359,056 - 52,390,170 (31,115)
  query : 9 - 853 (845/903)
  7 exons
  identity = 0.980
  3'(0.994;1.000;1.000;1.000;1.000;0.928;0.990)5'
  coverage = 0.991
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto_nucl 16, cyto 13.5, nucl 11.5, extr 6
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0015392)

HIX0015392
HIT000589497 ( ENST00000485702 )
  (Krueppel-associated box domain containing protein.)
  genome : 52,359,055 - 52,391,233 (32,179)
  query : 1 - 641 (641/641)
  6 exons
  identity = 0.995
  3'(1.000;1.000;1.000;1.000;1.000;0.967)5'
  coverage = 1.000
  InterPro :
    IPR001909 : Krueppel-associated box
  GO :
    0003676 : Molecular Function : nucleic acid binding
    0005622 : Cellular Component : intracellular
    0006355 : Biological Process : regulation of transcription, DNA-dependent
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 19, extr 10, cyto_mito 10
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0015392)

HIX0015392
HIT000013467 ( AK056853 )
  (Similar to Uncharacterized protein; Fragment;)
  genome : 52,359,057 - 52,382,095 (23,039)
  query : 1 - 1,800 (1,800/1,800)
  3 exons
  identity = 1.000
  3'(1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 16, cyto_nucl 7.5, cyto 7, nucl 6
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0015392)

HIX0015392
HIT000581383 ( ENST00000477228 )
  (Krueppel-associated box domain containing protein.)
  genome : 52,359,057 - 52,382,095 (23,039)
  query : 1 - 1,800 (1,800/1,800)
  3 exons
  identity = 1.000
  3'(1.000;1.000;1.000)5'
  coverage = 1.000
  InterPro :
    IPR001909 : Krueppel-associated box
  GO :
    0003676 : Molecular Function : nucleic acid binding
    0005622 : Cellular Component : intracellular
    0006355 : Biological Process : regulation of transcription, DNA-dependent
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cysk 25, cyto 3.5, cyto_nucl 3, extr 2
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0015392)

HIX0015392
HIT000510150 ( ENST00000412216 )
  (Krueppel-associated box domain containing protein.)
  genome : 52,359,063 - 52,391,204 (32,142)
  query : 1 - 1,865 (1,865/1,865)
  7 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  InterPro :
    IPR001909 : Krueppel-associated box
  GO :
    0003676 : Molecular Function : nucleic acid binding
    0005622 : Cellular Component : intracellular
    0006355 : Biological Process : regulation of transcription, DNA-dependent
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto_nucl 16, cyto 13.5, nucl 11.5, extr 6
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0015392)

HIX0202952
HIT000011918 ( AK055304 )
  Representative transcript
  (Similar to Uncharacterized protein;)
  genome : 52,364,556 - 52,367,856 (3,301)
  query : 1 - 3,301 (3,301/3,301)
  1 exon
  identity = 0.998
  3'(0.998)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto_nucl 13.5, nucl 11.5, cyto 8.5, extr 6, mito 6
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0202952)
  Ortholog candidate  ( -> Evola )
    Bos sp. (Cow) : BC151619
    Equus sp. (Horse) : XM_001917584
    Canis sp. (Dog) : XM_541457

HIX0015392
HIT000544448 ( ENST00000446514 )
  (Krueppel-associated box domain containing protein.)
  genome : 52,381,654 - 52,391,142 (9,489)
  query : 1 - 573 (573/573)
  6 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  InterPro :
    IPR001909 : Krueppel-associated box
  GO :
    0003676 : Molecular Function : nucleic acid binding
    0005622 : Cellular Component : intracellular
    0006355 : Biological Process : regulation of transcription, DNA-dependent
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto_nucl 11.5, cyto 10, nucl 9, extr 8, mito 5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0015392)

HIX0015392
HIT000517072 ( ENST00000419138 )
  (Krueppel-associated box domain containing protein.)
  genome : 52,381,696 - 52,391,229 (9,534)
  query : 1 - 512 (512/512)
  5 exons
  identity = 0.994
  3'(1.000;1.000;1.000;1.000;0.966)5'
  coverage = 1.000
  InterPro :
    IPR001909 : Krueppel-associated box
  GO :
    0003676 : Molecular Function : nucleic acid binding
    0005622 : Cellular Component : intracellular
    0006355 : Biological Process : regulation of transcription, DNA-dependent
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 13, cyto_nucl 13, cyto 9, extr 7
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0015392)

HIX0015392
HIT000587959 ( ENST00000484095 )
  (Hypothetical short protein.)
  genome : 52,383,951 - 52,389,718 (5,768)
  query : 1 - 530 (530/530)
  2 exons
  identity = 1.000
  3'(1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0015392)

HIX0212750
HIT000067120 ( AF086241 )
  (Hypothetical protein.)
  genome : 52,393,473 - 52,393,943 (471)
  query : 1 - 471 (471/480)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    mito 9.5, extr 8, E.R._mito 6, plas 5, cyto 4, nucl 2,
    pero 2, cyto_golg 2
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0212750)

HIX0174630
HIT000551206 ( ENST00000453272 )
  (Similar to Uncharacterized protein;)
  genome : 52,381,642 - 52,394,203 (12,562)
  query : 1 - 523 (523/523)
  4 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  InterPro :
    IPR007087 : Zinc finger, C2H2-type
    IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
    IPR015880 : Zinc finger, C2H2-like
  GO :
    0003676 : Molecular Function : nucleic acid binding
    0005622 : Cellular Component : intracellular
    0008270 : Molecular Function : zinc ion binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 31.5, cyto_nucl 16.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0174630)

HIX0174630
HIT000558574 ( FJ423743 )
  Representative transcript
  (Similar to Uncharacterized protein;)
  genome : 52,383,962 - 52,394,145 (10,184)
  query : 1 - 229 (229/229)
  2 exons
  identity = 0.996
  3'(0.994;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 13.5, cyto_nucl 12, nucl 7.5, mito 5, extr 4
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0174630)

bases per tick : kb first site :
main : All Human Genes JIGSAW prediction ESTs assembly
homology : UCSC CCDS Pseudogene.org Conserved regions ( Segmental duplication P.troglodytes P.abelii M.mulatta M.musculus R.norvegicus C.familiaris E.caballus B.taurus M.domestica G.gallus D.rerio O.latipes T.nigroviridis T.rubripes )
gene prediction : FGENESH GenScan HMMgene tRNA
show... : SNPs ESTs(summary) ESTs(detail) CAGE tag(summary) CAGE tag(detail)
sequence viewer : = ( , )