bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0040017
HIT000200260 (
NM_003429
)
(Similar to Zinc-finger protein; Fragment;)
genome : 21,106,059 - 21,133,503 (27,445)
query : 1 - 2,331 (2,331/2,331)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
IPR015880 : Zinc finger, C2H2-like
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 17.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040017)
HIX0040017
HIT000659198 (
NR_034060
)
(Similar to Uncharacterized protein; Fragment;)
genome : 21,106,059 - 21,126,783 (20,725)
query : 1 - 1,554 (1,554/1,580)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, cyto 16.5, nucl 10.5, extr 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040017)
HIX0040017
HIT000125408 (
ENST00000328178
)
(Similar to Zinc-finger protein; Fragment;)
genome : 21,106,080 - 21,133,501 (27,422)
query : 1 - 2,308 (2,308/2,308)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
IPR015880 : Zinc finger, C2H2-like
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 17.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040017)
HIX0040017
HIT000137660 (
ENST00000345030
)
(Similar to Zinc-finger protein; Fragment;)
genome : 21,106,082 - 21,133,108 (27,027)
query : 1 - 1,814 (1,814/1,814)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
IPR015880 : Zinc finger, C2H2-like
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040017)
HIX0040017
HIT000262926
(
BC068066
)
(Similar to Uncharacterized protein; Fragment;)
genome : 21,106,082 - 21,126,783 (20,702)
query : 1 - 1,531 (1,531/1,557)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.999)3'
coverage = 0.999
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, cyto 16.5, nucl 10.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040017)
HIX0040017
HIT000115654 (
ENST00000300540
)
(Similar to Uncharacterized protein; Fragment;)
genome : 21,106,082 - 21,126,781 (20,700)
query : 1 - 1,529 (1,529/1,529)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, cyto 16.5, nucl 10.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040017)
HIX0040017
HIT000219425
(
U35376
)
Representative transcript
(Similar to Zinc-finger protein; Fragment;)
genome : 21,106,094 - 21,133,502 (27,409)
query : 6 - 2,296 (2,291/2,320)
4 exons
identity = 0.997
5'(1.000;1.000;1.000;0.996)3'
coverage = 0.998
InterPro :
IPR001909 : Krueppel-associated box
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
IPR015880 : Zinc finger, C2H2-like
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 17.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040017)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : ENSGALT00000035876
Monodelphis
sp. (Opossum) : ENSMODT00000030224
Pongo
sp. (Orangutan) : ENSPPYT00000011384
Takifugu
sp. (Fugu) : SINFRUT00000183394
Pan
sp. (Chimpanzee) : XM_001145538
Danio
sp. (Zebrafish) : XM_001922373
Macaca
sp. (Macaque) : XR_014450
HIX0040017
HIT000195993
(
M61866
)
(Similar to Uncharacterized protein; Fragment;)
genome : 21,106,095 - 21,131,908 (25,814)
query : 1 - 700 (700/700)
4 exons
identity = 0.999
5'(0.991;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040017)
HIX0040017
HIT000033901
(
BC008688
)
(Similar to Uncharacterized protein; Fragment;)
genome : 21,106,116 - 21,126,532 (20,417)
query : 1 - 1,259 (1,259/1,293)
4 exons
identity = 0.998
5'(1.000;1.000;1.000;0.998)3'
coverage = 0.994
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 10.5, nucl 8.5, cyto_mito 8.5,
extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040017)
HIX0040017
HIT000283863
(
CR604668
)
(Similar to Uncharacterized protein; Fragment;)
genome : 21,106,128 - 21,126,761 (20,634)
query : 1 - 1,463 (1,463/1,463)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-dependent
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, cyto 16.5, nucl 10.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040017)
HIX0021453
HIT000013841
(
AK057227
)
Representative transcript
(Hypothetical protein.)
genome : 21,109,583 - 21,111,520 (1,938)
query : 1 - 1,934 (1,934/1,934)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 11, cyto_nucl 10.5, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021453)
HIX0040017
HIT000195995
(
M61868
)
(Similar to Zinc-finger protein; Fragment;)
genome : 21,116,860 - 21,131,908 (15,049)
query : 1 - 456 (456/456)
2 exons
identity = 0.991
5'(1.000;0.989)3'
coverage = 1.000
InterPro :
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040017)
HIX0040017
HIT000427124
(
AK308258
)
(Similar to Zinc-finger protein; Fragment;)
genome : 21,119,402 - 21,133,003 (13,602)
query : 1 - 1,660 (1,660/1,660)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
IPR015880 : Zinc finger, C2H2-like
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0008270 : Molecular Function : zinc ion binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 28, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040017)
HIX0040017
HIT000094375
(
BC036394
)
(Similar to Zinc-finger protein; Fragment;)
genome : 21,119,466 - 21,133,502 (14,037)
query : 8 - 2,657 (2,650/2,672)
2 exons
identity = 0.996
5'(0.994;0.997)3'
coverage = 0.997
InterPro :
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
IPR015880 : Zinc finger, C2H2-like
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040017)
HIX0040017
HIT000098728
(
BC047646
)
(Similar to Zinc-finger protein; Fragment;)
genome : 21,119,488 - 21,133,500 (14,013)
query : 1 - 2,631 (2,631/2,647)
2 exons
identity = 1.000
5'(0.999;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040017)
HIX0040017
HIT000101721
(
D70831
)
(Zinc-finger protein; Fragment;)
genome : 21,131,774 - 21,132,978 (1,205)
query : 1 - 1,203 (1,203/1,203)
1 exon
identity = 0.988
5'(0.988)3'
coverage = 1.000
InterPro :
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
IPR015880 : Zinc finger, C2H2-like
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 18.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040017)
AC008739.5
21099781-21139780 F -
NCBI