bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0195874
HIT000704029_06 (
ENST00000592209
)
(Putative WAS protein family homolog 4; Protein FAM39CP;)
genome : 60,105 - 66,509 (6,405)
query : 1 - 449 (449/449)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19.5, cyto_mito 11.5, extr 6, cyto_pero 3.16667,
pero 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0195874)
HIX0195874
HIT000427501
(
AK308635
)
Representative transcript
(Conserved hypothetical protein.)
genome : 60,951 - 70,966 (10,016)
query : 11 - 1,147 (1,137/1,147)
3 exons
identity = 0.997
3'(0.998;0.994;1.000)5'
coverage = 0.991
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 27, cyto_nucl 4, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0195874)
HIX0195874
HIT000658735_06 (
NR_033266
)
(Hypothetical protein.)
genome : 60,951 - 70,966 (10,016)
query : 1 - 1,137 (1,137/1,137)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, cyto 7.5, cyto_nucl 6.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0195874)
HIX0195874
HIT000673138_06 (
ENST00000559884
)
(Putative WAS protein family homolog 3; Protein FAM39DP;)
genome : 65,814 - 70,966 (5,153)
query : 1 - 427 (427/427)
3 exons
identity = 0.998
3'(1.000;0.994;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 10.3333, cyto 7.5, extr_plas 7.5,
nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0195874)
HIX0195874
HIT000701579_06 (
ENST00000589741
)
(WAS protein family homolog 1.)
genome : 65,822 - 66,416 (595)
query : 1 - 383 (383/383)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, extr 9, nucl 6, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0195874)
HIX0195874
HIT000475157_03 (
ENST00000391654
)
(Hypothetical protein.)
genome : 65,917 - 70,966 (5,050)
query : 1 - 622 (622/622)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 14.5, cyto 8, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0195874)
HIX0195874
HIT000698890_06 (
ENST00000587045
)
(WAS protein family homolog 1.)
genome : 66,320 - 66,492 (173)
query : 1 - 173 (173/173)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto_nucl 10, cyto 8.5, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0195874)
HIX0226335
HIT000701334_05 (
ENST00000589495
)
(Hypothetical protein.)
genome : 68,403 - 69,146 (744)
query : 1 - 744 (744/744)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, extr 11, cyto_nucl 9.5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226335)
HIX0195874
HIT000430224_04
(
AK311358
)
(Hypothetical short protein.)
genome : 70,652 - 71,626 (975)
query : 1 - 976 (976/976)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 13.5, cyto 5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0195874)
HIX0212815
HIT000577693_06 (
ENST00000473358
)
(Hypothetical short protein.)
genome : 71,161 - 72,706 (1,546)
query : 1 - 712 (712/712)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212815)
HIX0212815
HIT000674374_06 (
ENST00000561145
)
(Hypothetical short protein.)
genome : 71,161 - 72,706 (1,546)
query : 1 - 712 (712/712)
3 exons
identity = 0.997
5'(0.998;1.000;0.992)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto_nucl 5.33333, nucl 4.5, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212815)
HIX0212815
HIT000702803_06 (
ENST00000590978
)
(Hypothetical short protein.)
genome : 71,161 - 72,706 (1,546)
query : 1 - 712 (712/712)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212815)
HIX0212815
HIT000697962_05 (
ENST00000586110
)
(Hypothetical short protein.)
genome : 71,786 - 72,719 (934)
query : 1 - 624 (624/624)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212815)
HIX0212815
HIT000573816_06 (
ENST00000469289
)
(Hypothetical short protein.)
genome : 71,874 - 72,718 (845)
query : 1 - 535 (535/535)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212815)
HIX0212815
HIT000672316_06 (
ENST00000559045
)
(Hypothetical short protein.)
genome : 71,987 - 72,719 (733)
query : 1 - 423 (423/423)
2 exons
identity = 0.998
5'(1.000;0.993)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto_nucl 5.33333, nucl 4.5, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212815)
HIX0225916
HIT000078124_06
(
AF346307
)
Representative transcript
(FAM138 family protein.)
genome : 76,163 - 77,690 (1,528)
query : 1 - 1,187 (1,187/1,188)
3 exons
identity = 0.994
5'(0.997;0.980;0.997)3'
coverage = 0.999
InterPro :
IPR023245 : FAM138
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 10, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225916)
HIX0225916
HIT000515258_02 (
ENST00000417324
)
(Hypothetical protein.)
genome : 76,163 - 77,690 (1,528)
query : 1 - 1,187 (1,187/1,187)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, mito 9, cyto_nucl 7.16667, nucl 6, cyto 4,
cyto_pero 3.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225916)
HIX0225916
HIT000546169_02 (
ENST00000448235
)
(Hypothetical protein.)
genome : 76,163 - 77,690 (1,528)
query : 1 - 1,187 (1,187/1,187)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, mito 9, cyto_nucl 7.16667, nucl 6, cyto 4,
cyto_pero 3.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225916)
HIX0174305
HIT000604321_06 (
ENST00000504074
)
(Protein FAM138A/B/C/F; Retina-specific protein F379;)
genome : 76,163 - 77,690 (1,528)
query : 1 - 1,187 (1,187/1,187)
3 exons
identity = 0.990
3'(0.992;0.980;0.992)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, extr 10, mito 4, golg 2, E.R._mito 2,
mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174305)
HIX0174305
HIT000679995_05 (
ENST00000566972
)
(Protein FAM138A/B/C/F; Retina-specific protein F379;)
genome : 76,163 - 77,690 (1,528)
query : 1 - 1,187 (1,187/1,187)
3 exons
identity = 0.990
3'(0.992;0.980;0.992)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, extr 10, mito 4, golg 2, E.R._mito 2,
mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174305)
HIX0174305
HIT000530517_06 (
ENST00000432583
)
(Protein FAM138A/B/C/F; Retina-specific protein F379;)
genome : 76,220 - 77,690 (1,471)
query : 1 - 1,232 (1,232/1,232)
2 exons
identity = 0.994
3'(0.992;0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, extr 8, cysk 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174305)
HIX0174305
HIT000544582_06 (
ENST00000446648
)
(Protein FAM138A/B/C/F; Retina-specific protein F379;)
genome : 76,220 - 77,690 (1,471)
query : 1 - 1,130 (1,130/1,130)
3 exons
identity = 0.995
3'(0.998;0.980;0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, mito 9, cyto_nucl 7.16667, nucl 6, cyto 4,
cyto_pero 3.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174305)
HIX0174305
HIT000563002_02 (
NR_026818
)
(Hypothetical protein.)
genome : 76,220 - 77,690 (1,471)
query : 1 - 1,130 (1,130/1,130)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, mito 9, cyto_nucl 7.16667, nucl 6, cyto 4,
cyto_pero 3.83333
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174305)
HIX0174305
HIT000563004_02 (
NR_026820
)
(Hypothetical protein.)
genome : 76,220 - 77,690 (1,471)
query : 1 - 1,130 (1,130/1,130)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, mito 9, cyto_nucl 7.16667, nucl 6, cyto 4,
cyto_pero 3.83333
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174305)
HIX0174305
HIT000547376_06 (
ENST00000449442
)
(Hypothetical protein.)
genome : 76,220 - 77,667 (1,448)
query : 1 - 1,107 (1,107/1,107)
3 exons
identity = 0.998
3'(0.998;1.000;0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, mito 9, cyto_nucl 7.16667, nucl 6, cyto 4,
cyto_pero 3.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174305)
HIX0225916
HIT000251978_04
(
AY341950
)
(Hypothetical protein.)
genome : 76,222 - 77,686 (1,465)
query : 1 - 1,124 (1,124/1,124)
3 exons
identity = 0.999
5'(1.000;1.000;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, mito 9, cyto_nucl 7.16667, nucl 6, cyto 4,
cyto_pero 3.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225916)
HIX0225916
HIT000251980_04
(
AY341952
)
(Hypothetical protein.)
genome : 76,222 - 77,686 (1,465)
query : 1 - 1,124 (1,124/1,124)
3 exons
identity = 0.998
5'(0.998;0.995;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, mito 9, cyto_nucl 7.16667, nucl 6, cyto 4,
cyto_pero 3.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225916)
HIX0225916
HIT000251981_06
(
AY341953
)
(Hypothetical protein.)
genome : 76,222 - 77,686 (1,465)
query : 1 - 1,124 (1,124/1,124)
3 exons
identity = 0.995
5'(0.995;0.990;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, extr 11, nucl 5.5, extr_plas 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225916)
HIX0174305
HIT000645268_06 (
ENST00000546223
)
(Protein FAM138A/B/C/F; Retina-specific protein F379;)
genome : 76,222 - 77,659 (1,438)
query : 1 - 1,199 (1,199/1,199)
2 exons
identity = 0.988
3'(0.987;0.991)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, extr 8, cysk 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174305)
HIX0174305
HIT000679772_05 (
ENST00000566743
)
(Protein FAM138A/B/C/F; Retina-specific protein F379;)
genome : 76,222 - 77,659 (1,438)
query : 1 - 1,199 (1,199/1,199)
2 exons
identity = 0.988
3'(0.987;0.991)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, extr 8, cysk 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174305)
HIX0174305
HIT000122319_07 (
ENST00000320165
)
(Protein FAM138A/B/C/F; Retina-specific protein F379;)
genome : 76,222 - 77,628 (1,407)
query : 1 - 1,066 (1,066/1,066)
3 exons
identity = 0.977
3'(0.977;0.971;0.980)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, extr 7, cysk 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174305)
HIX0174305
HIT000683469_06 (
ENST00000570604
)
(Protein FAM138A/B/C/F; Retina-specific protein F379;)
genome : 76,222 - 77,628 (1,407)
query : 1 - 1,064 (1,064/1,064)
3 exons
identity = 0.990
3'(0.993;0.980;0.990)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 11, nucl 4, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174305)
HIX0225916
HIT000393331_04
(
DQ786278
)
(Hypothetical protein.)
genome : 76,247 - 77,469 (1,223)
query : 1 - 884 (884/884)
3 exons
identity = 0.990
5'(0.991;0.995;0.979)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, mito 9, cyto_nucl 7.16667, nucl 6, cyto 4,
cyto_pero 3.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225916)
HIX0174305
HIT000501162_02
(
BC137207
)
Representative transcript
(Protein FAM138A/B/C/F; Retina-specific protein F379;)
genome : 76,342 - 77,522 (1,181)
query : 1 - 840 (840/840)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR023245 : FAM138
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, extr 12, nucl 2, mito 2, golg 2, mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174305)
HIX0174305
HIT000607770_06 (
ENST00000507796
)
(Protein FAM138A/B/C/F; Retina-specific protein F379;)
genome : 76,665 - 77,569 (905)
query : 1 - 564 (564/564)
3 exons
identity = 0.995
3'(0.992;0.995;0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 12, mito 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174305)
HIX0174305
HIT000697865_05 (
ENST00000586011
)
(Protein FAM138A/B/C/F; Retina-specific protein F379;)
genome : 76,789 - 77,659 (871)
query : 1 - 632 (632/632)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 10, cysk 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174305)
HIX0174305
HIT000566351_05 (
ENST00000461467
)
(Protein FAM138A/B/C/F; Retina-specific protein F379;)
genome : 76,854 - 77,682 (829)
query : 1 - 590 (590/590)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 10, cysk 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174305)
HIX0174305
HIT000672522_06 (
ENST00000559252
)
(Protein FAM138A/B/C/F; Retina-specific protein F379;)
genome : 76,854 - 77,682 (829)
query : 1 - 590 (590/590)
2 exons
identity = 0.997
3'(0.996;0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, extr 8, mito 2, cysk 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174305)
HIX0226265
HIT000698666_03 (
ENST00000586820
)
(Hypothetical protein.)
genome : 94,062 - 94,956 (895)
query : 1 - 895 (895/895)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226265)
HIX0212932
HIT000596306_03 (
ENST00000492842
)
(Olfactory receptor family protein.)
genome : 104,534 - 105,472 (939)
query : 1 - 940 (940/940)
1 exon
identity = 0.990
5'(0.990)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212932)
HIX0212932
HIT000700472_03 (
ENST00000588632
)
(Olfactory receptor family protein.)
genome : 104,535 - 105,471 (937)
query : 1 - 937 (937/937)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212932)
HIX0212932
HIT000125371_03 (
ENST00000328113
)
(Olfactory receptor family protein.)
genome : 104,535 - 105,436 (902)
query : 1 - 903 (903/903)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212932)
HIX0040180
HIT000333545
(
AY972817
)
(Olfactory receptor 4F17.)
genome : 107,471 - 111,417 (3,947)
query : 11 - 888 (878/888)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.989
InterPro :
IPR000725 : Olfactory receptor
GO :
0004984 : Molecular Function : olfactory receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040180)
HIX0040180
HIT000697847_03 (
ENST00000585993
)
(Olfactory receptor 4F4; HS14a-1-A; Olfactory receptor OR19-3;)
genome : 107,471 - 111,696 (4,226)
query : 1 - 1,157 (1,157/1,157)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040180)
HIX0040180
HIT000383513
(
AB065917
)
Representative transcript
(Olfactory receptor 4F4; HS14a-1-A; Olfactory receptor OR19-3;)
genome : 110,479 - 111,796 (1,318)
query : 1 - 1,318 (1,318/1,318)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR000725 : Olfactory receptor
GO :
0004984 : Molecular Function : olfactory receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040180)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000008070
Pan
sp. (Chimpanzee) : ENSPTRT00000018600
Macaca
sp. (Macaque) : XM_001088344
Monodelphis
sp. (Opossum) : XM_001378404
Equus
sp. (Horse) : XM_001502199
HIX0040180
HIT000333546
(
AY972818
)
(Olfactory receptor 4F17.)
genome : 110,622 - 111,417 (796)
query : 10 - 805 (796/805)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.989
InterPro :
IPR000725 : Olfactory receptor
GO :
0004984 : Molecular Function : olfactory receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040180)
HIX0040180
HIT000333547_04
(
AY972819
)
(Olfactory receptor 4F4; HS14a-1-A; Olfactory receptor OR19-3;)
genome : 110,622 - 111,417 (796)
query : 10 - 805 (796/805)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 0.989
InterPro :
IPR000725 : Olfactory receptor
GO :
0004984 : Molecular Function : olfactory receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040180)
HIX0040180
HIT000124481_03 (
ENST00000326183
)
(Olfactory receptor 4F4; HS14a-1-A; Olfactory receptor OR19-3;)
genome : 110,643 - 111,696 (1,054)
query : 1 - 1,054 (1,054/1,054)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040180)
HIX0040180
HIT000500832
(
BC136848
)
(Olfactory receptor 4F4; HS14a-1-A; Olfactory receptor OR19-3;)
genome : 110,643 - 111,696 (1,054)
query : 1 - 1,054 (1,054/1,054)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR000725 : Olfactory receptor
GO :
0004984 : Molecular Function : olfactory receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040180)
HIX0040180
HIT000500851
(
BC136867
)
(Olfactory receptor 4F4; HS14a-1-A; Olfactory receptor OR19-3;)
genome : 110,643 - 111,696 (1,054)
query : 1 - 1,054 (1,054/1,054)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR000725 : Olfactory receptor
GO :
0004984 : Molecular Function : olfactory receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040180)
HIX0040180
HIT000121535_01 (
ENST00000318050
)
(Olfactory receptor 4F4; HS14a-1-A; Olfactory receptor OR19-3;)
genome : 110,679 - 111,596 (918)
query : 1 - 918 (918/918)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040180)
HIX0040180
HIT000129389_03 (
ENST00000335137
)
(Olfactory receptor 4F4; HS14a-1-A; Olfactory receptor OR19-3;)
genome : 110,679 - 111,596 (918)
query : 1 - 918 (918/918)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040180)
HIX0040180
HIT000316085 (
NM_001005240
)
(Olfactory receptor 4F4; HS14a-1-A; Olfactory receptor OR19-3;)
genome : 110,679 - 111,596 (918)
query : 1 - 918 (918/918)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040180)
HIX0226192
HIT000672873_09 (
ENST00000559612
)
(Non-protein coding transcript.)
genome : 131,626 - 131,676 (51)
query : 1 - 51 (51/51)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226192)
HIX0212816
HIT000674142_06 (
ENST00000560907
)
(Hypothetical protein.)
genome : 145,401 - 145,814 (414)
query : 1 - 414 (414/414)
1 exon
identity = 0.981
5'(0.981)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 12.5, cyto_nucl 10, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212816)
HIX0212816
HIT000536368_08 (
ENST00000438434
)
(Uncharacterised protein family WW domain-binding protein 1 protein.)
genome : 145,407 - 145,830 (424)
query : 1 - 424 (424/424)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, mito 4, extr 1, nucl 1, cyto 1, E.R. 1,
cyto_nucl 1
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212816)
HIX0212816
HIT000619136_09 (
ENST00000519787
)
(Uncharacterised protein family WW domain-binding protein 1 protein.)
genome : 145,410 - 145,773 (364)
query : 1 - 364 (364/364)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, mito 4, extr 1, nucl 1, cyto 1, E.R. 1,
cyto_nucl 1
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212816)
HIX0212816
HIT000535839_08 (
ENST00000437905
)
(Uncharacterised protein family WW domain-binding protein 1 protein.)
genome : 145,411 - 145,773 (363)
query : 1 - 363 (363/363)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, mito 4, extr 1, nucl 1, cyto 1, E.R. 1,
cyto_nucl 1
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212816)
HIX0212816
HIT000605203_09 (
ENST00000505043
)
(Uncharacterised protein family WW domain-binding protein 1 protein.)
genome : 145,468 - 145,811 (344)
query : 1 - 344 (344/344)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25.5, extr_plas 13.5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212816)
HIX0212816
HIT000697993_05 (
ENST00000586141
)
(Uncharacterised protein family WW domain-binding protein 1 protein.)
genome : 145,485 - 145,812 (328)
query : 1 - 328 (328/328)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212816)
HIX0225988
HIT000672398_07 (
ENST00000559128
)
(Olfactory receptor family protein.)
genome : 156,279 - 157,216 (938)
query : 1 - 938 (938/938)
1 exon
identity = 0.990
3'(0.990)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10, mito 9, plas 3, nucl 3, lyso 3, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225988)
HIX0225988
HIT000701781_04 (
ENST00000589943
)
(Olfactory receptor family protein.)
genome : 156,279 - 157,215 (937)
query : 1 - 937 (937/937)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 13, extr 6, plas 3, cyto 3, lyso 3, cyto_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225988)
HIX0226232
HIT000697575_05 (
ENST00000585721
)
(Hypothetical short protein.)
genome : 159,361 - 174,665 (15,305)
query : 1 - 412 (412/412)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226232)
HIX0195929
pHIT000118541 ( pHIT000118541 )
Representative transcript
(Conserved hypothetical protein.)
genome : 165,012 - 196,945 (31,934)
query : 1 - 1,182 (1,182/1,182)
6 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0195929)
CAGE tag :
T19F0001783F
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : XR_025529
HIX0226305
HIT000700258_06 (
ENST00000588418
)
(Hypothetical short protein.)
genome : 176,907 - 177,913 (1,007)
query : 1 - 1,007 (1,007/1,007)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto 9, cyto_nucl 8, nucl 5, cysk 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226305)
HIX0174357
HIT000609072_07 (
ENST00000509192
)
(Hypothetical protein.)
genome : 182,578 - 195,853 (13,276)
query : 1 - 727 (727/727)
3 exons
identity = 0.996
3'(0.990;1.000;0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, extr 7, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174357)
HIX0174357
HIT000726194_04 (
NR_040415
)
(Hypothetical protein.)
genome : 182,578 - 195,853 (13,276)
query : 1 - 723 (723/723)
3 exons
identity = 0.977
3'(0.952;0.988;0.986)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, extr 5, nucl 3, pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174357)
HIX0174357
HIT000699276_06 (
ENST00000587432
)
(Hypothetical protein.)
genome : 182,670 - 195,710 (13,041)
query : 1 - 1,034 (1,034/1,034)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto_nucl 6.5, nucl 6, cyto 5, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174357)
HIX0174357
HIT000683139_05 (
ENST00000570230
)
(Hypothetical protein.)
genome : 190,742 - 209,892 (19,151)
query : 1 - 2,169 (2,169/2,184)
8 exons
identity = 0.991
3'(0.992;0.995;0.979;0.983;0.990;1.000;0.995;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 13, cyto_nucl 10.5, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174357)
HIX0174357
HIT000713551_06 (
ENST00000601814
)
(Hypothetical protein.)
genome : 190,978 - 202,240 (11,263)
query : 1 - 635 (635/635)
3 exons
identity = 0.998
3'(1.000;0.983;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 15, cyto 13.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174357)
HIX0174357
HIT000613015_10 (
ENST00000513445
)
(Hypothetical protein.)
genome : 191,172 - 191,357 (186)
query : 1 - 186 (186/186)
1 exon
identity = 0.989
3'(0.989)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, extr 5, nucl 5, plas 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174357)
HIX0174357
HIT000537335_07 (
ENST00000439401
)
(Hypothetical protein.)
genome : 191,172 - 191,354 (183)
query : 1 - 183 (183/183)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, extr 4, nucl 4, plas 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174357)
HIX0174357
HIT000683615_06 (
ENST00000570774
)
(Hypothetical protein.)
genome : 191,172 - 191,354 (183)
query : 1 - 183 (183/183)
1 exon
identity = 0.989
3'(0.989)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, extr 4, nucl 4, plas 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174357)
HIX0174357
HIT000543774_07 (
ENST00000445840
)
(Hypothetical protein.)
genome : 191,178 - 191,357 (180)
query : 1 - 180 (180/180)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, extr 4, nucl 4, plas 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174357)
HIX0174357
HIT000607985_11 (
ENST00000508026
)
(Hypothetical protein.)
genome : 191,179 - 191,356 (178)
query : 1 - 178 (178/178)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, extr 5, nucl 3, plas 2, pero 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174357)
HIX0174357
HIT000628428_10 (
ENST00000529266
)
(Hypothetical protein.)
genome : 191,207 - 195,710 (4,504)
query : 1 - 355 (355/355)
2 exons
identity = 0.997
3'(1.000;0.995)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 4.5, cyto_nucl 4.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174357)
HIX0174357
HIT000529746_05 (
ENST00000431812
)
(Hypothetical protein.)
genome : 191,212 - 195,696 (4,485)
query : 1 - 336 (336/336)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto_nucl 4, nucl 3.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174357)
HIX0174357
HIT000545888_05 (
ENST00000447954
)
(Hypothetical protein.)
genome : 191,212 - 195,696 (4,485)
query : 1 - 336 (336/336)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto_nucl 4, nucl 3.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174357)
HIX0174357
HIT000551510_07 (
ENST00000453576
)
(Hypothetical protein.)
genome : 191,212 - 195,696 (4,485)
query : 1 - 336 (336/336)
2 exons
identity = 0.994
3'(0.993;0.995)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 4.5, cyto_nucl 4.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174357)
HIX0174357
HIT000540921_08 (
ENST00000442987
)
(Hypothetical protein.)
genome : 193,155 - 196,968 (3,814)
query : 1 - 3,812 (3,812/3,812)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174357)
HIX0174357
HIT000610613_10 (
ENST00000510860
)
(Hypothetical protein.)
genome : 193,160 - 193,674 (515)
query : 1 - 516 (516/516)
1 exon
identity = 0.953
3'(0.953)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, nucl 9.5, cyto_nucl 8.16667, extr 6,
E.R._mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174357)
HIX0174357
HIT000704812_07 (
ENST00000592994
)
(Hypothetical protein.)
genome : 193,236 - 196,008 (2,773)
query : 1 - 2,067 (2,067/2,067)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174357)
HIX0174357
HIT000555125 (
ENST00000457191
)
(Conserved hypothetical protein.)
genome : 193,238 - 196,051 (2,814)
query : 1 - 2,729 (2,729/2,729)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174357)
HIX0174357
HIT000530657_07 (
ENST00000432723
)
(Hypothetical protein.)
genome : 193,244 - 195,083 (1,840)
query : 1 - 1,840 (1,840/1,840)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174357)
HIX0174357
HIT000538716_06 (
ENST00000440782
)
(Hypothetical protein.)
genome : 193,244 - 195,032 (1,789)
query : 1 - 1,795 (1,795/1,795)
1 exon
identity = 0.992
3'(0.992)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 3.5, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174357)
HIX0174357
HIT000048653
(
AK128780
)
(Conserved hypothetical protein.)
genome : 197,048 - 201,428 (4,381)
query : 1 - 2,147 (2,147/2,182)
2 exons
identity = 0.999
3'(0.998;0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 12.5, cyto 9, mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174357)
HIX0174357
HIT000657762_02 (
NR_028324
)
(Hypothetical protein.)
genome : 197,016 - 202,209 (5,194)
query : 1 - 4,874 (4,874/4,874)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 6, mito 6, cyto_pero 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174357)
HIX0174357
HIT000698896_05 (
ENST00000587051
)
(Hypothetical protein.)
genome : 197,124 - 205,076 (7,953)
query : 1 - 1,478 (1,478/1,478)
4 exons
identity = 0.994
3'(1.000;1.000;0.959;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174357)
HIX0174357
HIT000597557_06 (
ENST00000494149
)
(Hypothetical protein.)
genome : 197,273 - 198,027 (755)
query : 1 - 755 (755/755)
1 exon
identity = 0.993
3'(0.993)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto_nucl 8.16667, nucl 7, cyto 7,
cyto_pero 5.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174357)
HIX0174357
HIT000456381_11
(
DQ589850
)
(Non-protein coding transcript.)
genome : 197,820 - 197,849 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174357)
HIX0174357
HIT000699115_05 (
ENST00000587271
)
(Hypothetical protein.)
genome : 197,955 - 198,333 (379)
query : 1 - 379 (379/379)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto_nucl 8.83333, cyto 8, nucl 6.5,
E.R._mito 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174357)
HIX0174357
HIT000702203_06 (
ENST00000590372
)
(Hypothetical protein.)
genome : 198,052 - 200,775 (2,724)
query : 1 - 381 (381/381)
2 exons
identity = 0.977
3'(1.000;0.958)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, extr 9, cyto_pero 2.5, nucl 2, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174357)
HIX0174357
HIT000430488
(
AK311622
)
(Conserved hypothetical protein.)
genome : 198,360 - 201,002 (2,643)
query : 1 - 848 (848/848)
2 exons
identity = 0.980
3'(0.966;0.985)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 10.5, cyto_nucl 10.1667, extr 8, cyto 6.5,
mito 6, cyto_pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174357)
HIX0174357
HIT000497628
(
AK303004
)
Representative transcript
(Conserved hypothetical protein.)
genome : 200,112 - 202,173 (2,062)
query : 1 - 1,742 (1,742/1,742)
3 exons
identity = 0.997
3'(0.997;0.983;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, mito 7, cyto 6, cyto_pero 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174357)
HIX0174357
HIT000707710_06 (
ENST00000595919
)
(Hypothetical protein.)
genome : 200,828 - 201,111 (284)
query : 1 - 284 (284/284)
1 exon
identity = 0.993
3'(0.993)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, extr 5, pero 2, cyto 1.5, cyto_nucl 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174357)
HIX0174357
HIT000537972_07 (
ENST00000440038
)
(Hypothetical protein.)
genome : 201,228 - 208,388 (7,161)
query : 1 - 746 (746/746)
4 exons
identity = 0.995
3'(0.995;0.983;0.995;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, extr 5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174357)
HIX0174357
HIT000602235_09 (
ENST00000499986
)
(Hypothetical protein.)
genome : 201,585 - 218,823 (17,239)
query : 1 - 934 (934/934)
8 exons
identity = 0.960
3'(0.987;0.966;0.974;0.985;0.939;1.000;0.931;
0.938)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, mito 8, cyto 1.5, cyto_nucl 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174357)
HIX0174357
HIT000711522_06 (
ENST00000599771
)
(Hypothetical protein.)
genome : 203,900 - 205,229 (1,330)
query : 1 - 459 (459/459)
3 exons
identity = 0.991
3'(1.000;0.987;0.983)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 10.5, mito 8, cyto 5, extr 4,
E.R._mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174357)
HIX0174357
HIT000626878_05 (
ENST00000527683
)
(Hypothetical protein.)
genome : 203,901 - 209,397 (5,497)
query : 1 - 683 (683/683)
5 exons
identity = 0.993
3'(0.994;0.991;1.000;1.000;0.988)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 8.16667, cyto 7.5, extr_plas 7.5,
nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174357)
HIX0174357
HIT000713225_05 (
ENST00000601486
)
(Hypothetical protein.)
genome : 204,006 - 205,773 (1,768)
query : 1 - 696 (696/696)
4 exons
identity = 0.993
3'(1.000;0.988;0.983;0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 11.5, mito 5, extr 4, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174357)
HIX0174357
HIT000597223_11 (
ENST00000493797
)
(Hypothetical short protein.)
genome : 205,170 - 205,719 (550)
query : 1 - 323 (323/323)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, mito 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174357)
HIX0174357
HIT000588688_08 (
ENST00000484859
)
(Hypothetical protein.)
genome : 206,854 - 215,086 (8,233)
query : 1 - 4,860 (4,860/4,860)
2 exons
identity = 0.994
3'(0.996;0.993)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, extr 12, cyto_nucl 10.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174357)
HIX0174357
HIT000679924_06 (
ENST00000566898
)
(Hypothetical short protein.)
genome : 208,248 - 209,652 (1,405)
query : 1 - 561 (561/561)
2 exons
identity = 0.998
3'(1.000;0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174357)
HIX0226195
HIT000675020_06 (
ENST00000561805
)
(Hypothetical short protein.)
genome : 211,252 - 221,195 (9,944)
query : 1 - 519 (519/519)
2 exons
identity = 0.998
3'(0.998;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 11.5, cyto_nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226195)
HIX0174523
HIT000515593_07 (
ENST00000417659
)
(Hypothetical short protein.)
genome : 223,957 - 229,838 (5,882)
query : 1 - 295 (295/295)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174523)
HIX0174523
HIT000680013_06 (
ENST00000566992
)
(Hypothetical protein.)
genome : 223,999 - 234,541 (10,543)
query : 1 - 432 (432/432)
4 exons
identity = 0.986
3'(1.000;0.983;0.986;0.983)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18, cyto_nucl 10, cyto 7.5, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174523)
HIX0174523
HIT000554481_05 (
ENST00000456547
)
(GTF2I-like repeat containing protein.)
genome : 229,637 - 239,246 (9,610)
query : 1 - 356 (356/356)
4 exons
identity = 0.958
3'(0.960;1.000;0.897;0.957)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, extr 4, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174523)
HIX0174523
HIT000699751_09 (
ENST00000587910
)
(Non-protein coding transcript.)
genome : 229,640 - 230,165 (526)
query : 1 - 152 (152/152)
2 exons
identity = 0.980
3'(1.000;0.962)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174523)
HIX0174523
HIT000681039_05 (
ENST00000568048
)
(GTF2I-like repeat containing protein.)
genome : 229,928 - 239,239 (9,312)
query : 1 - 474 (474/474)
4 exons
identity = 0.987
3'(0.987;0.983;1.000;0.982)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, extr 12, cyto_nucl 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174523)
HIX0174523
HIT000674982_06 (
ENST00000561766
)
(Hypothetical protein.)
genome : 233,412 - 234,504 (1,093)
query : 1 - 364 (364/364)
3 exons
identity = 0.997
3'(0.992;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 4, cyto_nucl 3.83333, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174523)
HIX0174523
HIT000443775_09
(
DQ577244
)
Representative transcript
(Non-protein coding transcript.)
genome : 233,488 - 233,517 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174523)
HIX0174523
HIT000700595_07 (
ENST00000588755
)
(Non-protein coding transcript.)
genome : 239,145 - 239,247 (103)
query : 1 - 103 (103/103)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174523)
HIX0174523
HIT000681525_06 (
ENST00000568550
)
(Non-protein coding transcript.)
genome : 239,152 - 241,995 (2,844)
query : 1 - 563 (563/563)
2 exons
identity = 0.988
3'(0.977;0.989)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174523)
HIX0226198
HIT000679890_05 (
ENST00000566864
)
(Hypothetical protein.)
genome : 242,913 - 243,975 (1,063)
query : 1 - 719 (719/719)
3 exons
identity = 0.968
3'(0.950;0.980;0.971)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 3, mito 2, cyto_nucl 2, lyso 2,
cyto_golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226198)
HIX0226350
HIT000701818 (
ENST00000589981
)
(Conserved hypothetical protein.)
genome : 279,495 - 280,170 (676)
query : 1 - 676 (676/676)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226350)
HIX0014548
HIT000031201
(
BC002806
)
Representative transcript
(Lipid phosphate phosphohydrolase 2; EC=3.1.3.4; PAP2-gamma; PAP2-G; Phosphatidate phosphohydrolase type 2c; Phosphatidic acid phosphatase 2c; PAP-2c; PAP2c;)
genome : 281,047 - 291,386 (10,340)
query : 1 - 1,258 (1,258/1,291)
6 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.4
KEGG pathway :
00561 : Glycerolipid metabolism (35)
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
InterPro :
IPR000326 : Phosphatidic acid phosphatase type 2/haloperoxidase
IPR028674 : Lipid phosphate phosphohydrolase 2
GO :
0003824 : Molecular Function : catalytic activity
0008195 : Molecular Function : phosphatidate phosphatase activity
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, extr 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014548)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AF503611
Mus
sp. (Mouse) : AK049581
Danio
sp. (Zebrafish) : BC054702
Bos
sp. (Cow) : BC113292
Tetraodon
sp. (Tetraodon) : CR644319
Oryzias
sp. (Medaka) : ENSORLT00000017857
Oryzias
sp. (Medaka) : ENSORLT00000021084
Pongo
sp. (Orangutan) : ENSPPYT00000010814
Tetraodon
sp. (Tetraodon) : GSTENT00028782001
Takifugu
sp. (Fugu) : SINFRUT00000150454
Macaca
sp. (Macaque) : XM_001116998
Monodelphis
sp. (Opossum) : XM_001376145
Equus
sp. (Horse) : XM_001915927
Danio
sp. (Zebrafish) : XM_687169
Canis
sp. (Dog) : XM_850170
Pan
sp. (Chimpanzee) : XR_025178
HIX0014548
HIT000200513 (
NM_003712
)
(Lipid phosphate phosphohydrolase 2; EC=3.1.3.4; PAP2-gamma; PAP2-G; Phosphatidate phosphohydrolase type 2c; Phosphatidic acid phosphatase 2c; PAP-2c; PAP2c;)
genome : 281,045 - 291,435 (10,391)
query : 1 - 1,309 (1,309/1,327)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.4
KEGG pathway :
00561 : Glycerolipid metabolism (35)
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, extr 9
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014548)
HIX0014548
HIT000215483 (
NM_177526
)
(Lipid phosphate phosphohydrolase 2; EC=3.1.3.4; PAP2-gamma; PAP2-G; Phosphatidate phosphohydrolase type 2c; Phosphatidic acid phosphatase 2c; PAP-2c; PAP2c;)
genome : 281,045 - 291,435 (10,391)
query : 1 - 1,268 (1,268/1,286)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.4
KEGG pathway :
00561 : Glycerolipid metabolism (35)
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, cyto 3, pero 2, lyso 2, cyto_plas 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014548)
HIX0014548
HIT000063319
(
AF035959
)
(Lipid phosphate phosphohydrolase 2; EC=3.1.3.4; PAP2-gamma; PAP2-G; Phosphatidate phosphohydrolase type 2c; Phosphatidic acid phosphatase 2c; PAP-2c; PAP2c;)
genome : 281,045 - 291,379 (10,335)
query : 1 - 1,251 (1,251/1,269)
6 exons
identity = 0.996
3'(0.990;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.4
KEGG pathway :
00561 : Glycerolipid metabolism (35)
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
InterPro :
IPR000326 : Phosphatidic acid phosphatase type 2/haloperoxidase
IPR028674 : Lipid phosphate phosphohydrolase 2
GO :
0003824 : Molecular Function : catalytic activity
0008195 : Molecular Function : phosphatidate phosphatase activity
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, extr 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014548)
HIX0014548
HIT000215495 (
NM_177543
)
(Lipid phosphate phosphohydrolase 2 isoform 3.)
genome : 281,045 - 291,169 (10,125)
query : 1 - 1,376 (1,376/1,394)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.4
KEGG pathway :
00561 : Glycerolipid metabolism (35)
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014548)
HIX0014548
HIT000110492 (
ENST00000269812
)
(Lipid phosphate phosphohydrolase 2; EC=3.1.3.4; PAP2-gamma; PAP2-G; Phosphatidate phosphohydrolase type 2c; Phosphatidic acid phosphatase 2c; PAP-2c; PAP2c;)
genome : 281,043 - 291,386 (10,344)
query : 1 - 1,262 (1,262/1,262)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.4
KEGG pathway :
00561 : Glycerolipid metabolism (35)
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014548)
HIX0014548
HIT000329631
(
AB209696
)
(Lipid phosphate phosphohydrolase 2 isoform 2.)
genome : 281,048 - 288,537 (7,490)
query : 1 - 6,454 (6,454/6,456)
3 exons
identity = 0.999
3'(1.000;1.000;0.998)5'
coverage = 1.000
EC number :
EC 3.1.3.4
KEGG pathway :
00561 : Glycerolipid metabolism (35)
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
InterPro :
IPR000326 : Phosphatidic acid phosphatase type 2/haloperoxidase
IPR028674 : Lipid phosphate phosphohydrolase 2
GO :
0003824 : Molecular Function : catalytic activity
0008195 : Molecular Function : phosphatidate phosphatase activity
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23.5, cyto_mito 13.1667, cyto_pero 2.83333,
extr 2, nucl 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014548)
HIX0014548
HIT000532259 (
ENST00000434325
)
(Lipid phosphate phosphohydrolase 2; EC=3.1.3.4; PAP2-gamma; PAP2-G; Phosphatidate phosphohydrolase type 2c; Phosphatidic acid phosphatase 2c; PAP-2c; PAP2c;)
genome : 281,345 - 291,393 (10,049)
query : 1 - 926 (926/926)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.4
KEGG pathway :
00561 : Glycerolipid metabolism (35)
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, cyto 3, pero 2, lyso 2, cyto_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014548)
HIX0014548
HIT000064142
(
AF047760
)
(Lipid phosphate phosphohydrolase 2; EC=3.1.3.4; PAP2-gamma; PAP2-G; Phosphatidate phosphohydrolase type 2c; Phosphatidic acid phosphatase 2c; PAP-2c; PAP2c;)
genome : 281,372 - 291,379 (10,008)
query : 1 - 926 (926/926)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.4
KEGG pathway :
00561 : Glycerolipid metabolism (35)
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
InterPro :
IPR000326 : Phosphatidic acid phosphatase type 2/haloperoxidase
IPR028674 : Lipid phosphate phosphohydrolase 2
GO :
0003824 : Molecular Function : catalytic activity
0008195 : Molecular Function : phosphatidate phosphatase activity
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, extr 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014548)
HIX0014548
HIT000064680
(
AF056083
)
(Lipid phosphate phosphohydrolase 2; EC=3.1.3.4; PAP2-gamma; PAP2-G; Phosphatidate phosphohydrolase type 2c; Phosphatidic acid phosphatase 2c; PAP-2c; PAP2c;)
genome : 281,379 - 291,379 (10,001)
query : 1 - 920 (920/920)
6 exons
identity = 0.999
3'(0.994;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.4
KEGG pathway :
00561 : Glycerolipid metabolism (35)
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
InterPro :
IPR000326 : Phosphatidic acid phosphatase type 2/haloperoxidase
IPR028674 : Lipid phosphate phosphohydrolase 2
GO :
0003824 : Molecular Function : catalytic activity
0008195 : Molecular Function : phosphatidate phosphatase activity
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, extr 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014548)
HIX0014548
HIT000099941
(
BT007021
)
(Lipid phosphate phosphohydrolase 2; EC=3.1.3.4; PAP2-gamma; PAP2-G; Phosphatidate phosphohydrolase type 2c; Phosphatidic acid phosphatase 2c; PAP-2c; PAP2c;)
genome : 281,390 - 291,336 (9,947)
query : 1 - 865 (865/867)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
EC number :
EC 3.1.3.4
KEGG pathway :
00561 : Glycerolipid metabolism (35)
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
InterPro :
IPR000326 : Phosphatidic acid phosphatase type 2/haloperoxidase
IPR028674 : Lipid phosphate phosphohydrolase 2
GO :
0003824 : Molecular Function : catalytic activity
0008195 : Molecular Function : phosphatidate phosphatase activity
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, extr 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014548)
HIX0014548
HIT000125193 (
ENST00000327790
)
(Lipid phosphate phosphohydrolase 2 isoform 3.)
genome : 281,388 - 291,200 (9,813)
query : 1 - 1,064 (1,064/1,064)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.4
KEGG pathway :
00561 : Glycerolipid metabolism (35)
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014548)
HIX0014548
HIT000698843 (
ENST00000586998
)
(Lipid phosphate phosphohydrolase 2; EC=3.1.3.4; PAP2-gamma; PAP2-G; Phosphatidate phosphohydrolase type 2c; Phosphatidic acid phosphatase 2c; PAP-2c; PAP2c;)
genome : 281,991 - 287,636 (5,646)
query : 1 - 541 (541/541)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.4
KEGG pathway :
00561 : Glycerolipid metabolism (35)
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 16, nucl 4.5, cyto_nucl 4.5, cyto 3.5, plas 3,
E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014548)
HIX0014548
HIT000701510 (
ENST00000589672
)
(Lipid phosphate phosphohydrolase 2; EC=3.1.3.4; PAP2-gamma; PAP2-G; Phosphatidate phosphohydrolase type 2c; Phosphatidic acid phosphatase 2c; PAP-2c; PAP2c;)
genome : 287,161 - 288,530 (1,370)
query : 1 - 1,102 (1,102/1,102)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.4
KEGG pathway :
00561 : Glycerolipid metabolism (35)
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, extr_plas 7.5, plas 7, cyto_nucl 7, extr 6,
cyto_pero 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014548)
HIX0014548
HIT000703394 (
ENST00000591572
)
(Lipid phosphate phosphohydrolase 2; EC=3.1.3.4; PAP2-gamma; PAP2-G; Phosphatidate phosphohydrolase type 2c; Phosphatidic acid phosphatase 2c; PAP-2c; PAP2c;)
genome : 287,474 - 291,382 (3,909)
query : 1 - 546 (546/546)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.4
KEGG pathway :
00561 : Glycerolipid metabolism (35)
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 16, plas 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014548)
HIX0014549
HIT000000909
(
AB033019
)
(Mesoderm induction early response protein 2; Mi-er2;)
genome : 301,444 - 336,178 (34,735)
query : 2 - 7,118 (7,117/7,118)
13 exons
identity = 0.963
3'(0.953;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.990)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 16, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014549)
HIX0014549
HIT000040484
(
BC028203
)
Representative transcript
(Mesoderm induction early response protein 2; Mi-er2;)
genome : 305,575 - 336,178 (30,604)
query : 14 - 2,762 (2,749/2,825)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.990)5'
coverage = 0.995
InterPro :
IPR000949 : ELM2 domain
IPR001005 : SANT/Myb domain
IPR017884 : SANT domain
GO :
0003682 : Molecular Function : chromatin binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 16.3333, cyto 7.5,
cyto_pero 4.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014549)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK154672
Bos
sp. (Cow) : BC142273
Gallus
sp. (Chicken) : CR385660
Pongo
sp. (Orangutan) : ENSPPYT00000010816
Tetraodon
sp. (Tetraodon) : GSTENT00028781001
Takifugu
sp. (Fugu) : SINFRUT00000135507
Rattus
sp. (Rat) : XM_001074414
Macaca
sp. (Macaque) : XM_001090898
Monodelphis
sp. (Opossum) : XM_001376120
Equus
sp. (Horse) : XM_001497040
Danio
sp. (Zebrafish) : XM_688054
Canis
sp. (Dog) : XM_850165
Pan
sp. (Chimpanzee) : XR_025179
HIX0014549
HIT000317326 (
NM_017550
)
(Mesoderm induction early response protein 2; Mi-er2;)
genome : 305,575 - 336,178 (30,604)
query : 14 - 2,762 (2,749/2,825)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.990)5'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 16.3333, cyto 7.5,
cyto_pero 4.83333
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014549)
HIX0226051
HIT000703355 (
ENST00000591533
)
(Hypothetical short protein.)
genome : 305,573 - 306,467 (895)
query : 1 - 542 (542/542)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 10, extr 9, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226051)
HIX0014549
HIT000109451 (
ENST00000264819
)
(Mesoderm induction early response protein 2; Mi-er2;)
genome : 305,575 - 336,178 (30,604)
query : 16 - 2,764 (2,749/2,764)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.990)5'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto_nucl 16.3333, cyto 7.5,
cyto_pero 4.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014549)
HIX0226051
HIT000700932 (
ENST00000589092
)
(Hypothetical short protein.)
genome : 305,579 - 325,706 (20,128)
query : 1 - 439 (439/439)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 13, extr 9, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226051)
HIX0014549
HIT000698839 (
ENST00000586994
)
(Mesoderm induction early response protein 2; Mi-er2;)
genome : 326,607 - 336,178 (9,572)
query : 1 - 1,015 (1,015/1,015)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 9, cyto_nucl 5.66667, cyto 5.5,
nucl 4.5, E.R._mito 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014549)
HIX0014549
HIT000704540 (
ENST00000592722
)
(Conserved hypothetical protein.)
genome : 327,864 - 340,599 (12,736)
query : 1 - 563 (563/563)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito 12, cyto 3, cyto_nucl 2.83333,
cyto_pero 2.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014549)
HIX0014549
HIT000699807 (
ENST00000587966
)
(Mesoderm induction early response protein 2; Mi-er2;)
genome : 334,115 - 344,798 (10,684)
query : 1 - 453 (453/453)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 5.5, cyto_nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014549)
HIX0014550
HIT000135270 (
ENST00000342640
)
(Testicular haploid expressed gene protein; Cancer/testis antigen 56; CT56;)
genome : 361,750 - 376,013 (14,264)
query : 1 - 1,633 (1,633/1,633)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014550)
HIX0014550
HIT000206256 (
NM_016585
)
(Testicular haploid expressed gene protein; Cancer/testis antigen 56; CT56;)
genome : 362,058 - 376,013 (13,956)
query : 1 - 1,325 (1,325/1,341)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014550)
HIX0014550
HIT000319658 (
NM_199202
)
(Testicular haploid expressed gene protein; Cancer/testis antigen 56; CT56;)
genome : 362,058 - 376,013 (13,956)
query : 1 - 1,253 (1,253/1,269)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014550)
HIX0014550
HIT000075736
(
AF268610
)
Representative transcript
(Testicular haploid expressed gene protein; Cancer/testis antigen 56; CT56;)
genome : 362,058 - 375,979 (13,922)
query : 1 - 1,291 (1,291/1,307)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR006623 : Testicular haploid expressed repeat
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014550)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AJ011834
Rattus
sp. (Rat) : BC083921
Bos
sp. (Cow) : BC111226
Pongo
sp. (Orangutan) : ENSPPYT00000010817
Macaca
sp. (Macaque) : XM_001091136
Pan
sp. (Chimpanzee) : XM_512216
Canis
sp. (Dog) : XM_533966
HIX0014550
HIT000629855 (
ENST00000530711
)
(Testicular haploid expressed gene protein; Cancer/testis antigen 56; CT56;)
genome : 362,058 - 374,620 (12,563)
query : 1 - 851 (851/851)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, nucl 12, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014550)
HIX0014550
HIT000040570
(
BC028574
)
(Testicular haploid expressed gene protein; Cancer/testis antigen 56; CT56;)
genome : 362,166 - 375,992 (13,827)
query : 1 - 1,196 (1,196/1,213)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.998
InterPro :
IPR006623 : Testicular haploid expressed repeat
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014550)
HIX0014550
HIT000059078
(
AB033129
)
(Testicular haploid expressed gene protein; Cancer/testis antigen 56; CT56;)
genome : 362,163 - 376,013 (13,851)
query : 1 - 1,220 (1,220/1,220)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR006623 : Testicular haploid expressed repeat
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014550)
HIX0014550
HIT000307371 (
ENST00000346878
)
(Testicular haploid expressed gene protein; Cancer/testis antigen 56; CT56;)
genome : 362,200 - 375,970 (13,771)
query : 1 - 1,068 (1,068/1,068)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014550)
HIX0014550
HIT000627397 (
ENST00000528213
)
(Testicular haploid expressed gene protein; Cancer/testis antigen 56; CT56;)
genome : 371,202 - 374,249 (3,048)
query : 1 - 563 (563/583)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.966
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014550)
HIX0226403
HIT000703579 (
ENST00000591757
)
(Non-protein coding transcript.)
genome : 397,589 - 398,941 (1,353)
query : 1 - 297 (297/297)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226403)
HIX0202702
HIT000029071
(
AL834341
)
(C2 calcium-dependent domain-containing protein 4C.)
genome : 405,446 - 408,314 (2,869)
query : 1 - 2,869 (2,869/2,889)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
InterPro :
IPR000008 : C2 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202702)
HIX0202702
HIT000560361 (
NM_001136263
)
(C2 calcium-dependent domain-containing protein 4C; Nuclear-localized factor 3; Protein FAM148C;)
genome : 405,443 - 409,170 (3,728)
query : 1 - 3,124 (3,124/3,124)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202702)
HIX0202702
HIT000127668 (
ENST00000332235
)
(C2 calcium-dependent domain-containing protein 4C; Nuclear-localized factor 3; Protein FAM148C;)
genome : 405,445 - 409,139 (3,695)
query : 1 - 3,091 (3,091/3,091)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202702)
HIX0202702
HIT000001672
(
AB075837
)
Representative transcript
(C2 calcium-dependent domain-containing protein 4C; Nuclear-localized factor 3; Protein FAM148C;)
genome : 405,447 - 409,170 (3,724)
query : 1 - 2,976 (2,976/2,976)
3 exons
identity = 0.997
3'(1.000;0.997;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202702)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC089008
Canis
sp. (Dog) : ENSCAFT00000031365
Gallus
sp. (Chicken) : ENSGALT00000001942
Macaca
sp. (Macaque) : ENSMMUT00000000713
Oryzias
sp. (Medaka) : ENSORLT00000021135
Pongo
sp. (Orangutan) : ENSPPYT00000010818
Rattus
sp. (Rat) : ENSRNOT00000010555
Tetraodon
sp. (Tetraodon) : GSTENT00028788001
Takifugu
sp. (Fugu) : SINFRUT00000183087
Monodelphis
sp. (Opossum) : XM_001376066
Bos
sp. (Cow) : XM_597854
Danio
sp. (Zebrafish) : XM_692105
HIX0027436
HIT000092135
(
BC030527
)
(Conserved hypothetical protein.)
genome : 416,589 - 419,879 (3,291)
query : 1 - 1,691 (1,691/1,804)
2 exons
identity = 0.998
3'(0.995;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 9, cyto_nucl 7.5, nucl 6, extr_plas 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027436)
HIX0027436
HIT000098952
(
BC048290
)
(SHC-transforming protein 2.)
genome : 416,588 - 422,456 (5,869)
query : 12 - 1,191 (1,180/1,280)
3 exons
identity = 0.997
3'(0.995;1.000;1.000)5'
coverage = 0.990
InterPro :
IPR000980 : SH2 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.5, cyto 11, nucl 10, mito 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027436)
HIX0027436
HIT000093465
(
BC034544
)
(SHC-transforming protein 2.)
genome : 416,589 - 422,828 (6,240)
query : 1 - 1,551 (1,551/1,619)
3 exons
identity = 0.992
3'(0.993;1.000;0.990)5'
coverage = 1.000
InterPro :
IPR000980 : SH2 domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, mito 5, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027436)
HIX0027436
HIT000398361 (
NM_012435
)
(SHC-transforming protein 2; Protein Sck; SHC-transforming protein B; Src homology 2 domain-containing-transforming protein C2; SH2 domain protein C2;)
genome : 416,584 - 460,996 (44,413)
query : 1 - 2,493 (2,493/2,509)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 11.5, cyto 9.5, extr 4, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027436)
HIX0027436
HIT000250500
(
AL360254
)
(SHC-transforming protein 2.)
genome : 416,589 - 438,999 (22,411)
query : 1 - 1,918 (1,918/1,934)
11 exons
identity = 0.998
3'(0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000980 : SH2 domain
IPR006019 : Phosphotyrosine interaction domain, Shc-like
IPR006020 : PTB/PI domain
GO :
0005515 : Molecular Function : protein binding
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20.5, cyto_mito 14.6667, cyto 7.5,
cyto_pero 5.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027436)
HIX0027436
HIT000700216 (
ENST00000588376
)
(SHC-transforming protein 2; Protein Sck; SH2 domain protein C2; Src homology 2 domain-containing-transforming protein C2;)
genome : 416,583 - 422,828 (6,246)
query : 1 - 1,557 (1,557/1,557)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, cyto 9.5, cyto_nucl 9, mito 6, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027436)
HIX0027436
HIT000699267 (
ENST00000587423
)
(Conserved hypothetical protein.)
genome : 416,583 - 419,879 (3,297)
query : 1 - 1,697 (1,697/1,697)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 9, cyto_nucl 7.5, nucl 6, extr_plas 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027436)
HIX0027436
HIT000109348 (
ENST00000264554
)
(SHC-transforming protein 2; Protein Sck; SHC-transforming protein B; Src homology 2 domain-containing-transforming protein C2; SH2 domain protein C2;)
genome : 416,593 - 460,996 (44,404)
query : 1 - 2,484 (2,484/2,484)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 11.5, cyto 9.5, extr 4, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027436)
HIX0027436
HIT000057948
(
AB001451
)
Representative transcript
(SHC-transforming protein 2.)
genome : 416,593 - 460,865 (44,273)
query : 6 - 2,358 (2,353/2,358)
13 exons
identity = 0.990
3'(0.993;1.000;1.000;0.993;1.000;1.000;0.992;
1.000;1.000;1.000;1.000;1.000;0.953)5'
coverage = 0.998
InterPro :
IPR000980 : SH2 domain
IPR006019 : Phosphotyrosine interaction domain, Shc-like
IPR006020 : PTB/PI domain
GO :
0005515 : Molecular Function : protein binding
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 14.5, nucl 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027436)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AB001452
Mus
sp. (Mouse) : AK032878
Danio
sp. (Zebrafish) : BC134083
Bos
sp. (Cow) : ENSBTAT00000021391
Canis
sp. (Dog) : ENSCAFT00000031363
Oryzias
sp. (Medaka) : ENSORLT00000021051
Pongo
sp. (Orangutan) : ENSPPYT00000010819
Pan
sp. (Chimpanzee) : ENSPTRT00000018609
Tetraodon
sp. (Tetraodon) : GSTENT00028773001
Takifugu
sp. (Fugu) : SINFRUT00000137453
Gallus
sp. (Chicken) : XM_001233681
Equus
sp. (Horse) : XM_001916530
Macaca
sp. (Macaque) : XR_014559
HIX0027436
HIT000701760 (
ENST00000589922
)
(SHC-transforming protein 1 isoform 5 precursor.)
genome : 416,609 - 441,384 (24,776)
query : 1 - 2,650 (2,650/2,650)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 14.5, nucl 9, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027436)
HIX0027436
HIT000702005 (
ENST00000590170
)
(SHC-transforming protein 3; Neuronal Shc; N-Shc; SHC-transforming protein C; Src homology 2 domain-containing-transforming protein C3; SH2 domain protein C3;)
genome : 417,200 - 436,258 (19,059)
query : 1 - 806 (806/806)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, nucl 13, extr 10, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027436)
HIX0027436
HIT000703770 (
ENST00000591948
)
(SHC-transforming protein 3; Neuronal Shc; N-Shc; SHC-transforming protein C; Src homology 2 domain-containing-transforming protein C3; SH2 domain protein C3;)
genome : 417,200 - 436,258 (19,059)
query : 1 - 806 (806/806)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, nucl 13, extr 10, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027436)
HIX0027436
HIT000048698
(
AK128825
)
(Conserved hypothetical protein.)
genome : 422,753 - 427,118 (4,366)
query : 2 - 3,939 (3,938/3,939)
2 exons
identity = 0.998
3'(0.992;0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 7.16667, nucl 6.5, cyto 6.5,
cyto_pero 4.83333, mito_nucl 4.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027436)
HIX0040256
HIT000250511
(
AL360274
)
Representative transcript
(Conserved hypothetical protein.)
genome : 432,571 - 433,169 (599)
query : 1 - 587 (587/588)
1 exon
identity = 0.960
3'(0.960)5'
coverage = 0.998
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040256)
HIX0027436
HIT000702057 (
ENST00000590222
)
(SHC-transforming protein 3.)
genome : 434,702 - 460,571 (25,870)
query : 1 - 951 (951/951)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 16.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027436)
HIX0027436
HIT000703211 (
ENST00000591388
)
(SHC-transforming protein 2; Protein Sck; SH2 domain protein C2; Src homology 2 domain-containing-transforming protein C2;)
genome : 435,771 - 436,534 (764)
query : 1 - 473 (473/473)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, cyto_nucl 10.5, extr 10, nucl 6, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027436)
HIX0027436
HIT000701948 (
ENST00000590113
)
(SHC-transforming protein 2; Protein Sck; SH2 domain protein C2; Src homology 2 domain-containing-transforming protein C2;)
genome : 435,779 - 439,031 (3,253)
query : 1 - 598 (598/598)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 15.5, nucl 8, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027436)
HIX0202787
HIT000318662 (
NM_182577
)
(Outer dense fiber protein 3-like protein 2;)
genome : 463,346 - 474,983 (11,638)
query : 1 - 1,604 (1,604/1,607)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 7, cyto 7, cyto_pero 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202787)
HIX0202787
HIT000028743
(
AL833870
)
(Hypothetical protein.)
genome : 463,361 - 464,607 (1,247)
query : 1 - 757 (757/773)
2 exons
identity = 0.993
3'(0.995;0.986)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto 9.5, cyto_nucl 7.83333, mito 7,
cyto_pero 5.66667, mito_nucl 5.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202787)
HIX0202787
HIT000120532 (
ENST00000315489
)
(Outer dense fiber protein 3-like protein 2;)
genome : 463,346 - 474,983 (11,638)
query : 1 - 1,604 (1,604/1,604)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 7, cyto 7, cyto_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202787)
HIX0202787
HIT000022232
(
AK097378
)
Representative transcript
(Outer dense fiber protein 3-like protein 2;)
genome : 463,360 - 474,983 (11,624)
query : 1 - 1,589 (1,589/1,589)
4 exons
identity = 0.996
3'(0.994;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR010736 : Sperm-tail PG-rich repeat
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 7, cyto 7, cyto_pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202787)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK158063
Danio
sp. (Zebrafish) : BC092779
Equus
sp. (Horse) : ENSECAT00000012767
Oryzias
sp. (Medaka) : ENSORLT00000017570
Oryzias
sp. (Medaka) : ENSORLT00000021027
Pongo
sp. (Orangutan) : ENSPPYT00000010821
Tetraodon
sp. (Tetraodon) : GSTENT00028771001
Tetraodon
sp. (Tetraodon) : GSTENT00031934001
Takifugu
sp. (Fugu) : SINFRUT00000137449
Takifugu
sp. (Fugu) : SINFRUT00000167360
Rattus
sp. (Rat) : XM_001077384
Monodelphis
sp. (Opossum) : XM_001375947
Danio
sp. (Zebrafish) : XM_687680
Canis
sp. (Dog) : XM_850151
Bos
sp. (Cow) : XM_868683
HIX0202787
HIT000337762
(
BC104468
)
(Outer dense fiber protein 3-like protein 2.)
genome : 463,467 - 474,880 (11,414)
query : 1 - 1,271 (1,271/1,271)
3 exons
identity = 0.997
3'(0.996;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR010736 : Sperm-tail PG-rich repeat
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 7.5, nucl 5, cyto_pero 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202787)
HIX0202787
HIT000363974 (
ENST00000382696
)
(Outer dense fiber protein 3-like protein 2.)
genome : 463,467 - 474,880 (11,414)
query : 1 - 1,272 (1,272/1,272)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 7.5, nucl 5, cyto_pero 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202787)
HIX0202787
HIT000337763
(
BC104469
)
(Outer dense fiber protein 3-like protein 2;)
genome : 463,467 - 474,876 (11,410)
query : 1 - 1,375 (1,375/1,375)
4 exons
identity = 0.997
3'(0.996;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR010736 : Sperm-tail PG-rich repeat
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 7, cyto 7, cyto_pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202787)
HIX0202787
HIT000703503 (
ENST00000591681
)
(Outer dense fiber protein 3-like protein 2.)
genome : 464,146 - 472,631 (8,486)
query : 1 - 571 (571/571)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 9, extr 8, cyto 6.5, nucl 6, cyto_pero 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202787)
HIX0014553
HIT000017078
(
AK092211
)
(Mucosal addressin cell adhesion molecule 1; MAdCAM-1; hMAdCAM-1; Precursor;)
genome : 489,176 - 505,342 (16,167)
query : 1 - 1,771 (1,771/1,771)
4 exons
identity = 0.982
5'(1.000;0.694;0.935;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 9, cyto 6, mito_pero 6, extr 5, cyto_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014553)
HIX0014553
HIT000699384 (
ENST00000587541
)
(Mucosal addressin cell adhesion molecule 1; MAdCAM-1; hMAdCAM-1; Precursor;)
genome : 489,176 - 505,342 (16,167)
query : 1 - 1,723 (1,723/1,723)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 9, cyto 8, plas 4.5, mito 4, extr_plas 3.5,
mito_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014553)
HIX0226427
HIT000704231 (
ENST00000592413
)
(Conserved hypothetical protein.)
genome : 490,046 - 507,813 (17,768)
query : 1 - 830 (830/830)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 13.5, cyto 7, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226427)
HIX0014553
HIT000102914 (
ENST00000215637
)
(Mucosal addressin cell adhesion molecule 1; MAdCAM-1; hMAdCAM-1; Precursor;)
genome : 496,454 - 505,347 (8,894)
query : 1 - 1,577 (1,577/1,577)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, extr_plas 15, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014553)
HIX0014553
HIT000307251 (
ENST00000346144
)
(Mucosal addressin cell adhesion molecule 1 isoform b precursor.)
genome : 496,454 - 505,207 (8,754)
query : 1 - 1,176 (1,176/1,176)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 19.5, extr_plas 14.5, extr 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014553)
HIX0014553
HIT000500430
(
BC136408
)
(Mucosal addressin cell adhesion molecule 1; MAdCAM-1; hMAdCAM-1; Precursor;)
genome : 496,454 - 505,207 (8,754)
query : 1 - 1,509 (1,509/1,509)
5 exons
identity = 0.966
5'(1.000;1.000;0.913;0.947;0.996)3'
coverage = 1.000
InterPro :
IPR015169 : Adhesion molecule, immunoglobulin-like
GO :
0007155 : Biological Process : cell adhesion
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, extr_plas 15, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014553)
HIX0014553
HIT000501399
(
BC137506
)
Representative transcript
(Mucosal addressin cell adhesion molecule 1 isoform b precursor.)
genome : 496,454 - 505,207 (8,754)
query : 1 - 1,176 (1,176/1,176)
4 exons
identity = 0.999
5'(1.000;1.000;0.997;1.000)3'
coverage = 1.000
InterPro :
IPR015169 : Adhesion molecule, immunoglobulin-like
GO :
0007155 : Biological Process : cell adhesion
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 19.5, extr_plas 14.5, extr 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014553)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK137028
Rattus
sp. (Rat) : D87840
Bos
sp. (Cow) : DQ288286
Canis
sp. (Dog) : ENSCAFT00000031356
Pongo
sp. (Orangutan) : ENSPPYT00000010822
Pan
sp. (Chimpanzee) : ENSPTRT00000056438
Macaca
sp. (Macaque) : XM_001117030
Monodelphis
sp. (Opossum) : XM_001375911
HIX0014553
HIT000501400
(
BC137507
)
(Mucosal addressin cell adhesion molecule 1 isoform b precursor.)
genome : 496,454 - 505,207 (8,754)
query : 1 - 1,176 (1,176/1,176)
4 exons
identity = 0.999
5'(1.000;1.000;0.997;1.000)3'
coverage = 1.000
InterPro :
IPR015169 : Adhesion molecule, immunoglobulin-like
GO :
0007155 : Biological Process : cell adhesion
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 19.5, extr_plas 14.5, extr 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014553)
HIX0014553
HIT000502499
(
BC144065
)
(Mucosal addressin cell adhesion molecule 1 isoform b precursor.)
genome : 496,454 - 505,207 (8,754)
query : 1 - 1,176 (1,176/1,176)
4 exons
identity = 0.998
5'(1.000;1.000;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR015169 : Adhesion molecule, immunoglobulin-like
GO :
0007155 : Biological Process : cell adhesion
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 19.5, extr_plas 14.5, extr 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014553)
HIX0014553
HIT000212053 (
NM_130760
)
(Mucosal addressin cell adhesion molecule 1; MAdCAM-1; hMAdCAM-1; Precursor;)
genome : 496,490 - 505,343 (8,854)
query : 1 - 1,537 (1,537/1,546)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, extr_plas 15, extr 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014553)
HIX0014553
HIT000212055 (
NM_130762
)
(Mucosal addressin cell adhesion molecule 1 isoform b precursor.)
genome : 496,490 - 505,343 (8,854)
query : 1 - 1,276 (1,276/1,285)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 19.5, extr_plas 14.5, extr 8.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014553)
HIX0014553
HIT000221767
(
U82483
)
(Mucosal addressin cell adhesion molecule 1; MAdCAM-1; hMAdCAM-1; Precursor;)
genome : 496,490 - 505,343 (8,854)
query : 1 - 1,537 (1,537/1,546)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;0.996;0.998)3'
coverage = 1.000
InterPro :
IPR015169 : Adhesion molecule, immunoglobulin-like
GO :
0007155 : Biological Process : cell adhesion
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, extr_plas 15, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014553)
HIX0014553
HIT000435332
(
BC142629
)
(Mucosal addressin cell adhesion molecule 1; MAdCAM-1; hMAdCAM-1; Precursor;)
genome : 496,494 - 505,343 (8,850)
query : 1 - 1,605 (1,605/1,662)
5 exons
identity = 0.969
5'(1.000;1.000;0.913;0.947;0.998)3'
coverage = 1.000
InterPro :
IPR015169 : Adhesion molecule, immunoglobulin-like
GO :
0007155 : Biological Process : cell adhesion
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, extr_plas 15, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014553)
HIX0014553
HIT000219867
(
U43628
)
(Mucosal addressin cell adhesion molecule 1; MAdCAM-1; hMAdCAM-1; Precursor;)
genome : 496,500 - 505,342 (8,843)
query : 1 - 1,598 (1,598/1,598)
5 exons
identity = 0.968
5'(1.000;1.000;0.913;0.947;0.997)3'
coverage = 1.000
InterPro :
IPR015169 : Adhesion molecule, immunoglobulin-like
GO :
0007155 : Biological Process : cell adhesion
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, extr_plas 15, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014553)
HIX0014553
HIT000257403
(
AY732484
)
(Mucosal addressin cell adhesion molecule 1 isoform b precursor.)
genome : 496,500 - 504,965 (8,466)
query : 1 - 603 (603/603)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR015169 : Adhesion molecule, immunoglobulin-like
GO :
0007155 : Biological Process : cell adhesion
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 20.5, extr_plas 15, extr 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014553)
HIX0014553
HIT000257840
(
AY819760
)
(Mucosal addressin cell adhesion molecule 1; MAdCAM-1; hMAdCAM-1; Precursor;)
genome : 496,500 - 504,965 (8,466)
query : 1 - 1,173 (1,173/1,173)
5 exons
identity = 0.975
5'(1.000;0.996;0.991;0.913;0.995)3'
coverage = 1.000
InterPro :
IPR015169 : Adhesion molecule, immunoglobulin-like
GO :
0007155 : Biological Process : cell adhesion
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 23, extr_plas 15, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014553)
HIX0014553
HIT000341070
(
DQ076657
)
(Mucosal addressin cell adhesion molecule 1 isoform b precursor.)
genome : 496,500 - 504,965 (8,466)
query : 1 - 1,197 (1,197/1,197)
5 exons
identity = 0.963
5'(0.981;1.000;1.000;0.862;1.000)3'
coverage = 1.000
InterPro :
IPR015169 : Adhesion molecule, immunoglobulin-like
GO :
0007155 : Biological Process : cell adhesion
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, extr_plas 15, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014553)
HIX0014553
HIT000363961 (
ENST00000382683
)
(Mucosal addressin cell adhesion molecule 1 isoform b precursor.)
genome : 496,500 - 504,965 (8,466)
query : 1 - 603 (603/603)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 20.5, extr_plas 15, extr 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014553)
HIX0202870
HIT000312871 (
ENST00000359315
)
(Tubulin polyglutamylase complex subunit 1.)
genome : 507,299 - 519,654 (12,356)
query : 1 - 1,312 (1,312/1,312)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito_pero 9.83333, mito 9.5, pero 8,
E.R._mito 5.66667, plas 5.5, cyto 4.5, cyto_nucl 4.5, nucl 3.5,
extr_plas 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202870)
HIX0202870
HIT000046043
(
AK126170
)
Representative transcript
(Tubulin polyglutamylase complex subunit 1.)
genome : 507,497 - 520,516 (13,020)
query : 1 - 1,926 (1,926/1,926)
3 exons
identity = 0.990
5'(1.000;1.000;0.983)3'
coverage = 1.000
InterPro :
IPR003117 : Dimerization-anchoring domain of cAMP-dependent protein kinase, regulatory subunit
SOSUI :
SOLUBLE PROTEIN
PSORT :
pero 9, cyto 7, cyto_mito 6.33333, cyto_nucl 5.83333,
plas 5, mito 4.5, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202870)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK153467
Bos
sp. (Cow) : ENSBTAT00000020032
Canis
sp. (Dog) : ENSCAFT00000031353
Oryzias
sp. (Medaka) : ENSORLT00000017678
Pongo
sp. (Orangutan) : ENSPPYT00000010826
Rattus
sp. (Rat) : XM_001076820
Pan
sp. (Chimpanzee) : XM_001171918
Monodelphis
sp. (Opossum) : XM_001375897
Equus
sp. (Horse) : XM_001915968
Danio
sp. (Zebrafish) : XR_044896
HIX0202870
HIT000317701 (
NM_033513
)
(Tubulin polyglutamylase complex subunit 1.)
genome : 507,497 - 519,654 (12,158)
query : 1 - 1,114 (1,114/1,134)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
pero 8, cyto 7.5, cyto_nucl 6.83333,
cyto_mito 6.66667, plas 5, mito 4.5, nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202870)
HIX0202870
HIT000045274
(
AK125401
)
(Tubulin polyglutamylase complex subunit 1; PGs1; p32;)
genome : 507,500 - 510,372 (2,873)
query : 1 - 2,873 (2,873/2,873)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
InterPro :
IPR003117 : Dimerization-anchoring domain of cAMP-dependent protein kinase, regulatory subunit
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 15, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202870)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK077345
HIX0202870
HIT000700118 (
ENST00000588278
)
(Tubulin polyglutamylase complex subunit 1; PGs1; p32;)
genome : 507,500 - 510,372 (2,873)
query : 1 - 2,873 (2,873/2,873)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 15, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202870)
HIX0202870
HIT000087300
(
BC009520
)
(Tubulin polyglutamylase complex subunit 1.)
genome : 507,611 - 519,654 (12,044)
query : 1 - 1,000 (1,000/1,069)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR003117 : Dimerization-anchoring domain of cAMP-dependent protein kinase, regulatory subunit
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 8, pero 8, cyto 7, mito_pero 6.5, nucl 5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202870)
HIX0014554
HIT000102908 (
ENST00000215574
)
(Ubiquitin-conjugating enzyme E2 R1; EC=6.3.2.19; Ubiquitin-conjugating enzyme E2-32 kDa complementing; Ubiquitin-conjugating enzyme E2-CDC34; Ubiquitin-protein ligase R1;)
genome : 531,714 - 542,087 (10,374)
query : 1 - 1,464 (1,464/1,464)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 6.3.2.19
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, mito 13, cyto_nucl 9, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014554)
HIX0014554
HIT000038294
(
BC018143
)
(Ubiquitin-conjugating enzyme E2 R1; EC=6.3.2.19; Ubiquitin-conjugating enzyme E2-32 kDa complementing; Ubiquitin-conjugating enzyme E2-CDC34; Ubiquitin-protein ligase R1;)
genome : 531,730 - 541,585 (9,856)
query : 1 - 946 (946/1,004)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 6.3.2.19
InterPro :
IPR000608 : Ubiquitin-conjugating enzyme E2
IPR016135 : Ubiquitin-conjugating enzyme/RWD-like
IPR023313 : Ubiquitin-conjugating enzyme, active site
GO :
0016881 : Molecular Function : acid-amino acid ligase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, mito 13, cyto_nucl 9, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014554)
HIX0014554
HIT000424351
(
AK291554
)
(Ubiquitin-conjugating enzyme E2 R1; EC=6.3.2.19; Ubiquitin-conjugating enzyme E2-32 kDa complementing; Ubiquitin-conjugating enzyme E2-CDC34; Ubiquitin-protein ligase R1;)
genome : 531,731 - 541,660 (9,930)
query : 1 - 1,020 (1,020/1,020)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 6.3.2.19
InterPro :
IPR000608 : Ubiquitin-conjugating enzyme E2
IPR016135 : Ubiquitin-conjugating enzyme/RWD-like
IPR023313 : Ubiquitin-conjugating enzyme, active site
GO :
0016881 : Molecular Function : acid-amino acid ligase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, mito 13, cyto_nucl 9, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014554)
HIX0014554
HIT000034616
(
BC009850
)
Representative transcript
(Ubiquitin-conjugating enzyme E2 R1; EC=6.3.2.19; Ubiquitin-conjugating enzyme E2-32 kDa complementing; Ubiquitin-conjugating enzyme E2-CDC34; Ubiquitin-protein ligase R1;)
genome : 531,733 - 542,087 (10,355)
query : 1 - 1,445 (1,445/1,462)
5 exons
identity = 0.999
5'(0.997;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 6.3.2.19
InterPro :
IPR000608 : Ubiquitin-conjugating enzyme E2
IPR016135 : Ubiquitin-conjugating enzyme/RWD-like
IPR023313 : Ubiquitin-conjugating enzyme, active site
GO :
0016881 : Molecular Function : acid-amino acid ligase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, mito 13, cyto_nucl 9, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014554)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC039160
Danio
sp. (Zebrafish) : BC075995
Rattus
sp. (Rat) : BC098064
Oryzias
sp. (Medaka) : ENSORLT00000021147
Pongo
sp. (Orangutan) : ENSPPYT00000010827
Tetraodon
sp. (Tetraodon) : GSTENT00028789001
Takifugu
sp. (Fugu) : SINFRUT00000153579
Takifugu
sp. (Fugu) : SINFRUT00000163085
Monodelphis
sp. (Opossum) : XM_001365693
Equus
sp. (Horse) : XM_001488127
Gallus
sp. (Chicken) : XM_423237
Canis
sp. (Dog) : XM_533965
Bos
sp. (Cow) : XM_868121
Pan
sp. (Chimpanzee) : XR_022314
HIX0014554
HIT000201110 (
NM_004359
)
(Ubiquitin-conjugating enzyme E2 R1; EC=6.3.2.19; Ubiquitin-conjugating enzyme E2-32 kDa complementing; Ubiquitin-conjugating enzyme E2-CDC34; Ubiquitin-protein ligase R1;)
genome : 531,733 - 542,087 (10,355)
query : 1 - 1,445 (1,445/1,462)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 6.3.2.19
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, mito 13, cyto_nucl 9, nucl 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014554)
HIX0014554
HIT000192493
(
L22005
)
(Ubiquitin-conjugating enzyme E2 R1; EC=6.3.2.19; Ubiquitin-conjugating enzyme E2-32 kDa complementing; Ubiquitin-conjugating enzyme E2-CDC34; Ubiquitin-protein ligase R1;)
genome : 531,749 - 542,026 (10,278)
query : 4 - 1,371 (1,368/1,374)
5 exons
identity = 0.999
5'(0.997;1.000;1.000;1.000;0.999)3'
coverage = 0.996
EC number :
EC 6.3.2.19
InterPro :
IPR000608 : Ubiquitin-conjugating enzyme E2
IPR016135 : Ubiquitin-conjugating enzyme/RWD-like
IPR023313 : Ubiquitin-conjugating enzyme, active site
GO :
0016881 : Molecular Function : acid-amino acid ligase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, mito 13, cyto_nucl 9, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014554)
HIX0014554
HIT000039704
(
BC023979
)
(Ubiquitin-conjugating enzyme E2 R1; EC=6.3.2.19; Ubiquitin-conjugating enzyme E2-32 kDa complementing; Ubiquitin-conjugating enzyme E2-CDC34; Ubiquitin-protein ligase R1;)
genome : 531,760 - 542,087 (10,328)
query : 5 - 1,422 (1,418/1,439)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.997
EC number :
EC 6.3.2.19
InterPro :
IPR000608 : Ubiquitin-conjugating enzyme E2
IPR016135 : Ubiquitin-conjugating enzyme/RWD-like
IPR023313 : Ubiquitin-conjugating enzyme, active site
GO :
0016881 : Molecular Function : acid-amino acid ligase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, mito 13, cyto_nucl 9, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014554)
HIX0014554
HIT000698634 (
ENST00000586788
)
(Ubiquitin-conjugating enzyme E2 R1; EC=6.3.2.19; Ubiquitin-conjugating enzyme E2-32 kDa complementing; Ubiquitin-conjugating enzyme E2-CDC34; Ubiquitin-protein ligase R1;)
genome : 531,769 - 536,715 (4,947)
query : 1 - 900 (900/900)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 6.3.2.19
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 9.5, cyto_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014554)
HIX0014554
HIT000099579
(
BT006659
)
(Ubiquitin-conjugating enzyme E2 R1; EC=6.3.2.19; Ubiquitin-conjugating enzyme E2-32 kDa complementing; Ubiquitin-conjugating enzyme E2-CDC34; Ubiquitin-protein ligase R1;)
genome : 531,932 - 541,550 (9,619)
query : 1 - 709 (709/711)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.997
EC number :
EC 6.3.2.19
InterPro :
IPR000608 : Ubiquitin-conjugating enzyme E2
IPR016135 : Ubiquitin-conjugating enzyme/RWD-like
IPR023313 : Ubiquitin-conjugating enzyme, active site
GO :
0016881 : Molecular Function : acid-amino acid ligase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, mito 13, cyto_nucl 9, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014554)
HIX0014554
HIT000698133 (
ENST00000586283
)
(Ubiquitin-conjugating enzyme E2 R1; EC=6.3.2.19; Ubiquitin-conjugating enzyme E2-32 kDa complementing; Ubiquitin-conjugating enzyme E2-CDC34; Ubiquitin-protein ligase R1;)
genome : 536,951 - 542,042 (5,092)
query : 1 - 901 (901/901)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 6.3.2.19
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, extr 2, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014554)
HIX0014554
HIT000704854 (
ENST00000593036
)
(Ubiquitin-conjugating enzyme E2 R1; EC=6.3.2.19; Ubiquitin-conjugating enzyme E2-32 kDa complementing; Ubiquitin-conjugating enzyme E2-CDC34; Ubiquitin-protein ligase R1;)
genome : 541,219 - 541,658 (440)
query : 1 - 354 (354/354)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 6.3.2.19
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 11, nucl 2, mito 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014554)
HIX0014554
HIT000086123
(
BC002332
)
(Ubiquitin-conjugating enzyme E2 R1; EC=6.3.2.19; Ubiquitin-conjugating enzyme E2-32 kDa complementing; Ubiquitin-conjugating enzyme E2-CDC34; Ubiquitin-protein ligase R1;)
genome : 541,338 - 542,087 (750)
query : 8 - 757 (750/777)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.991
EC number :
EC 6.3.2.19
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 7.5, cyto_nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014554)
HIX0202841
HIT000202018 (
NM_005317
)
(Granzyme M; EC=3.4.21.-; Met-1 serine protease; Hu-Met-1; Met-ase; Natural killer cell granular protease; Precursor;)
genome : 544,034 - 549,920 (5,887)
query : 1 - 941 (941/958)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
EC number :
EC 3.4.21.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, cyto 2, lyso 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202841)
HIX0202841
HIT000724238 (
NM_001258351
)
(Granzyme M isoform 2.)
genome : 544,034 - 549,920 (5,887)
query : 1 - 937 (937/954)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 7, nucl 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202841)
HIX0202841
HIT000704319 (
ENST00000592501
)
(Granzyme M isoform 2.)
genome : 544,034 - 549,731 (5,698)
query : 1 - 748 (748/748)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, cyto 11.5, nucl 9, cyto_pero 8.33333,
extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202841)
HIX0202841
HIT000039969
(
BC025701
)
Representative transcript
(Granzyme M; EC=3.4.21.-; Met-1 serine protease; Hu-Met-1; Met-ase; Natural killer cell granular protease; Precursor;)
genome : 544,062 - 549,912 (5,851)
query : 1 - 905 (905/951)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.996)3'
coverage = 1.000
EC number :
EC 3.4.21.-
InterPro :
IPR001254 : Peptidase S1
IPR001314 : Peptidase S1A, chymotrypsin-type
IPR009003 : Trypsin-like cysteine/serine peptidase domain
IPR018114 : Peptidase S1, trypsin family, active site
GO :
0003824 : Molecular Function : catalytic activity
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, cyto 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202841)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AB015728
Gallus
sp. (Chicken) : ENSGALT00000024511
Monodelphis
sp. (Opossum) : ENSMODT00000008279
Oryzias
sp. (Medaka) : ENSORLT00000005673
Pongo
sp. (Orangutan) : ENSPPYT00000010828
Rattus
sp. (Rat) : L05175
Takifugu
sp. (Fugu) : SINFRUT00000155490
Bos
sp. (Cow) : XM_589755
Danio
sp. (Zebrafish) : XM_683417
HIX0202841
HIT000109347 (
ENST00000264553
)
(Granzyme M; EC=3.4.21.-; Met-1 serine protease; Hu-Met-1; Met-ase; Natural killer cell granular protease; Precursor;)
genome : 544,062 - 549,919 (5,858)
query : 1 - 912 (912/912)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.21.-
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, cyto 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202841)
HIX0202841
HIT000192529
(
L23134
)
(Granzyme M; EC=3.4.21.-; Met-1 serine protease; Hu-Met-1; Met-ase; Natural killer cell granular protease; Precursor;)
genome : 544,072 - 549,919 (5,848)
query : 1 - 902 (902/902)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
EC number :
EC 3.4.21.-
InterPro :
IPR001254 : Peptidase S1
IPR001314 : Peptidase S1A, chymotrypsin-type
IPR009003 : Trypsin-like cysteine/serine peptidase domain
IPR018114 : Peptidase S1, trypsin family, active site
GO :
0003824 : Molecular Function : catalytic activity
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, cyto 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202841)
HIX0226049
HIT000701296 (
ENST00000589457
)
(Conserved hypothetical protein.)
genome : 567,212 - 571,745 (4,534)
query : 1 - 719 (719/719)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226049)
HIX0226049
HIT000700748 (
ENST00000588908
)
(Conserved hypothetical protein.)
genome : 567,229 - 571,736 (4,508)
query : 1 - 617 (617/617)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226049)
HIX0226049
HIT000702126 (
ENST00000590292
)
(Non-protein coding transcript.)
genome : 567,311 - 571,734 (4,424)
query : 1 - 509 (509/509)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226049)
HIX0014556
HIT000319443 (
NM_198590
)
(Basigin family protein.)
genome : 571,277 - 583,493 (12,217)
query : 1 - 1,795 (1,795/1,814)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 16, cyto 5, E.R. 4.5, E.R._mito 3.5, extr 2,
nucl 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014556)
HIX0014556
HIT000319444 (
NM_198591
)
(Basigin family protein.)
genome : 571,277 - 583,493 (12,217)
query : 1 - 1,638 (1,638/1,657)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 15, nucl 5, cyto 4, E.R. 4, mito_nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014556)
HIX0014556
HIT000307375 (
ENST00000346916
)
(Basigin family protein.)
genome : 571,297 - 583,493 (12,197)
query : 1 - 1,618 (1,618/1,618)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 15, nucl 5, cyto 4, E.R. 4, mito_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014556)
HIX0014556
HIT000644552 (
ENST00000545507
)
(Basigin family protein.)
genome : 571,305 - 583,493 (12,189)
query : 1 - 1,767 (1,767/1,767)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 16, cyto 5, E.R. 4.5, E.R._mito 3.5, extr 2,
nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014556)
HIX0014556
HIT000648825
(
GU557064
)
(Basigin isoform 3.)
genome : 571,310 - 583,493 (12,184)
query : 1 - 1,762 (1,762/1,781)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR009151 : Basigin
IPR013098 : Immunoglobulin I-set
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 16, cyto 5, E.R. 4.5, E.R._mito 3.5, extr 2,
nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014556)
HIX0014556
HIT000648826
(
GU557065
)
(Basigin isoform 4.)
genome : 571,310 - 583,493 (12,184)
query : 1 - 1,605 (1,605/1,624)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR009151 : Basigin
IPR013098 : Immunoglobulin I-set
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 15, nucl 5, cyto 4, E.R. 4, mito_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014556)
HIX0014556
HIT000198665 (
NM_001728
)
(Basigin family protein.)
genome : 572,454 - 583,493 (11,040)
query : 1 - 2,088 (2,088/2,107)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 13, plas 12, pero 3, extr 2, lyso 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014556)
HIX0014556
HIT000319442 (
NM_198589
)
(Basigin family protein.)
genome : 572,454 - 583,493 (11,040)
query : 1 - 1,740 (1,740/1,759)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10.5, extr_plas 10.5, E.R. 10, plas 7.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014556)
HIX0014556
HIT000128395 (
ENST00000333511
)
(Basigin family protein.)
genome : 572,565 - 583,490 (10,926)
query : 1 - 1,974 (1,974/1,974)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 13, plas 12, pero 3, extr 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014556)
HIX0014556
HIT000496855
(
AK302231
)
(Basigin; 5F7; Collagenase stimulatory factor; Extracellular matrix metalloproteinase inducer; EMMPRIN; Leukocyte activation antigen M6; OK blood group antigen; Tumor cell-derived collagenase stimulatory factor; TCSF; AltName: CD_antigen=CD147; Precursor;)
genome : 572,565 - 583,352 (10,788)
query : 1 - 1,467 (1,467/1,467)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR009151 : Basigin
IPR013098 : Immunoglobulin I-set
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr_plas 10.5, E.R. 10, extr 9.5, plas 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014556)
HIX0014556
HIT000685719 (
ENST00000573216
)
(Basigin family protein.)
genome : 572,572 - 581,376 (8,805)
query : 1 - 545 (545/545)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, lyso 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014556)
HIX0014556
HIT000688922 (
ENST00000576925
)
(Basigin family protein.)
genome : 572,572 - 579,979 (7,408)
query : 1 - 610 (610/610)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014556)
HIX0014556
HIT000081513
(
AF548371
)
(Basigin; 5F7; Collagenase stimulatory factor; Extracellular matrix metalloproteinase inducer; EMMPRIN; Leukocyte activation antigen M6; OK blood group antigen; Tumor cell-derived collagenase stimulatory factor; TCSF; AltName: CD_antigen=CD147; Precursor;)
genome : 572,575 - 583,256 (10,682)
query : 1 - 1,730 (1,730/1,730)
9 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.993;1.000;1.000;
1.000;0.998)3'
coverage = 1.000
InterPro :
IPR003598 : Immunoglobulin subtype 2
IPR009151 : Basigin
IPR013098 : Immunoglobulin I-set
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 13, plas 12, pero 3, extr 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014556)
HIX0014556
HIT000322688
(
X64364
)
(Basigin; 5F7; Collagenase stimulatory factor; Extracellular matrix metalloproteinase inducer; EMMPRIN; Leukocyte activation antigen M6; OK blood group antigen; Tumor cell-derived collagenase stimulatory factor; TCSF; AltName: CD_antigen=CD147; Precursor;)
genome : 572,578 - 583,493 (10,916)
query : 1 - 1,616 (1,616/1,638)
8 exons
identity = 0.998
5'(1.000;1.000;1.000;0.993;1.000;1.000;1.000;
0.997)3'
coverage = 1.000
InterPro :
IPR009151 : Basigin
IPR013098 : Immunoglobulin I-set
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10.5, extr_plas 10.5, E.R. 10, plas 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014556)
HIX0014556
HIT000308414 (
ENST00000353555
)
(Basigin family protein.)
genome : 572,578 - 583,493 (10,916)
query : 1 - 1,616 (1,616/1,616)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10.5, extr_plas 10.5, E.R. 10, plas 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014556)
HIX0014556
HIT000252158
(
AY358113
)
Representative transcript
(Basigin; 5F7; Collagenase stimulatory factor; Extracellular matrix metalloproteinase inducer; EMMPRIN; Leukocyte activation antigen M6; OK blood group antigen; Tumor cell-derived collagenase stimulatory factor; TCSF; AltName: CD_antigen=CD147; Precursor;)
genome : 572,583 - 583,490 (10,908)
query : 1 - 1,956 (1,956/1,961)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.997
InterPro :
IPR003598 : Immunoglobulin subtype 2
IPR009151 : Basigin
IPR013098 : Immunoglobulin I-set
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 13, plas 12, pero 3, extr 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014556)
HIX0014556
HIT000034150
(
BC009040
)
(Basigin; 5F7; Collagenase stimulatory factor; Extracellular matrix metalloproteinase inducer; EMMPRIN; Leukocyte activation antigen M6; OK blood group antigen; Tumor cell-derived collagenase stimulatory factor; TCSF; AltName: CD_antigen=CD147; Precursor;)
genome : 572,591 - 583,493 (10,903)
query : 1 - 1,603 (1,603/1,622)
8 exons
identity = 0.998
5'(1.000;0.994;0.988;1.000;1.000;1.000;1.000;
0.997)3'
coverage = 1.000
InterPro :
IPR009151 : Basigin
IPR013098 : Immunoglobulin I-set
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10.5, extr_plas 10.5, E.R. 10, plas 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014556)
HIX0014556
HIT000192422
(
L20471
)
(Basigin; 5F7; Collagenase stimulatory factor; Extracellular matrix metalloproteinase inducer; EMMPRIN; Leukocyte activation antigen M6; OK blood group antigen; Tumor cell-derived collagenase stimulatory factor; TCSF; AltName: CD_antigen=CD147; Precursor;)
genome : 572,597 - 583,376 (10,780)
query : 3 - 1,488 (1,486/1,490)
8 exons
identity = 0.993
5'(0.955;0.994;1.000;0.993;0.996;1.000;1.000;
0.995)3'
coverage = 0.997
InterPro :
IPR009151 : Basigin
IPR013098 : Immunoglobulin I-set
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10.5, extr_plas 10.5, E.R. 10, plas 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014556)
HIX0014556
HIT000491482
(
AK296858
)
(Basigin; 5F7; Collagenase stimulatory factor; Extracellular matrix metalloproteinase inducer; EMMPRIN; Leukocyte activation antigen M6; OK blood group antigen; Tumor cell-derived collagenase stimulatory factor; TCSF; AltName: CD_antigen=CD147; Precursor;)
genome : 572,596 - 583,360 (10,765)
query : 1 - 1,120 (1,120/1,120)
6 exons
identity = 0.996
5'(1.000;0.988;0.986;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR009151 : Basigin
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 15, extr 10, plas 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014556)
HIX0014556
HIT000492504
(
AK297880
)
(Basigin; 5F7; Collagenase stimulatory factor; Extracellular matrix metalloproteinase inducer; EMMPRIN; Leukocyte activation antigen M6; OK blood group antigen; Tumor cell-derived collagenase stimulatory factor; TCSF; AltName: CD_antigen=CD147; Precursor;)
genome : 572,596 - 583,015 (10,420)
query : 1 - 1,468 (1,468/1,468)
9 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.993;1.000;1.000;
1.000;0.992)3'
coverage = 1.000
InterPro :
IPR003598 : Immunoglobulin subtype 2
IPR009151 : Basigin
IPR013098 : Immunoglobulin I-set
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 13, E.R. 13, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014556)
HIX0014556
HIT000061433
(
AB085790
)
(Basigin; 5F7; Collagenase stimulatory factor; Extracellular matrix metalloproteinase inducer; EMMPRIN; Leukocyte activation antigen M6; OK blood group antigen; Tumor cell-derived collagenase stimulatory factor; TCSF; AltName: CD_antigen=CD147; Precursor;)
genome : 572,596 - 582,867 (10,272)
query : 1 - 972 (972/972)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.996;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR009151 : Basigin
IPR013098 : Immunoglobulin I-set
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr_plas 11, E.R. 10, plas 9.5, extr 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014556)
HIX0014556
HIT000685445 (
ENST00000572899
)
(Conserved hypothetical protein.)
genome : 572,596 - 580,695 (8,100)
query : 1 - 580 (580/580)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014556)
HIX0014556
HIT000702053 (
ENST00000590218
)
(Immunoglobulin I-set domain containing protein.)
genome : 572,596 - 578,212 (5,617)
query : 1 - 545 (545/545)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014556)
HIX0014556
HIT000101270
(
D28441
)
(Non-protein coding transcript.)
genome : 572,597 - 572,640 (44)
query : 1 - 44 (44/44)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014556)
HIX0014556
HIT000101486
(
D45131
)
(Basigin; 5F7; Collagenase stimulatory factor; Extracellular matrix metalloproteinase inducer; EMMPRIN; Leukocyte activation antigen M6; OK blood group antigen; Tumor cell-derived collagenase stimulatory factor; TCSF; AltName: CD_antigen=CD147; Precursor;)
genome : 572,606 - 583,487 (10,882)
query : 1 - 1,581 (1,581/1,586)
8 exons
identity = 0.997
5'(1.000;1.000;1.000;0.993;1.000;1.000;1.000;
0.996)3'
coverage = 0.997
InterPro :
IPR009151 : Basigin
IPR013098 : Immunoglobulin I-set
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10.5, extr_plas 10.5, E.R. 10, plas 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014556)
HIX0014556
HIT000196689
(
M87879
)
(Basigin; 5F7; Collagenase stimulatory factor; Extracellular matrix metalloproteinase inducer; EMMPRIN; Leukocyte activation antigen M6; OK blood group antigen; Tumor cell-derived collagenase stimulatory factor; TCSF; AltName: CD_antigen=CD147; Precursor;)
genome : 572,629 - 583,489 (10,861)
query : 17 - 1,579 (1,563/1,584)
8 exons
identity = 0.995
5'(1.000;1.000;1.000;0.993;1.000;1.000;1.000;
0.991)3'
coverage = 0.987
InterPro :
IPR009151 : Basigin
IPR013098 : Immunoglobulin I-set
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10.5, extr_plas 10.5, E.R. 10, plas 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014556)
HIX0014556
HIT000192009
(
L10240
)
(Basigin; 5F7; Collagenase stimulatory factor; Extracellular matrix metalloproteinase inducer; EMMPRIN; Leukocyte activation antigen M6; OK blood group antigen; Tumor cell-derived collagenase stimulatory factor; TCSF; AltName: CD_antigen=CD147; Precursor;)
genome : 572,621 - 583,486 (10,866)
query : 1 - 1,566 (1,566/1,566)
8 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;0.996;1.000;1.000;
0.996)3'
coverage = 1.000
InterPro :
IPR009151 : Basigin
IPR013098 : Immunoglobulin I-set
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10.5, extr_plas 10.5, E.R. 10, plas 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014556)
HIX0014556
HIT000061213
(
AB072923
)
(Basigin family protein.)
genome : 572,621 - 582,577 (9,957)
query : 1 - 824 (824/824)
7 exons
identity = 0.996
5'(1.000;1.000;0.988;0.993;0.996;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR009151 : Basigin
IPR013098 : Immunoglobulin I-set
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr_plas 10.5, E.R. 10, plas 9.5, extr 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014556)
HIX0014556
HIT000061482
(
AB091680
)
(Basigin family protein.)
genome : 572,626 - 582,577 (9,952)
query : 1 - 819 (819/819)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR009151 : Basigin
IPR013098 : Immunoglobulin I-set
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10.5, extr_plas 10.5, E.R. 10, plas 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014556)
HIX0014556
HIT000686207 (
ENST00000573784
)
(Conserved hypothetical protein.)
genome : 575,047 - 581,402 (6,356)
query : 1 - 559 (559/559)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 7, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014556)
HIX0014556
HIT000687232 (
ENST00000574970
)
(Immunoglobulin I-set domain containing protein.)
genome : 575,052 - 579,629 (4,578)
query : 1 - 567 (567/567)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 10.5, cyto_nucl 7.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014556)
HIX0014556
HIT000688970 (
ENST00000576984
)
(Conserved hypothetical protein.)
genome : 575,221 - 580,775 (5,555)
query : 1 - 536 (536/536)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014556)
HIX0014556
HIT000020767
(
AK095912
)
(Basigin isoform 3.)
genome : 578,848 - 583,492 (4,645)
query : 13 - 2,155 (2,143/2,155)
7 exons
identity = 0.999
5'(0.999;1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 0.994
InterPro :
IPR009151 : Basigin
IPR013098 : Immunoglobulin I-set
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 11, nucl 9, plas 4, pero 4, cyto 2, lyso 2,
extr_plas 2, cysk_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014556)
HIX0014556
HIT000684440 (
ENST00000571735
)
(Basigin family protein.)
genome : 578,848 - 583,492 (4,645)
query : 1 - 2,143 (2,143/2,143)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 11, nucl 9, plas 4, pero 4, cyto 2, lyso 2,
extr_plas 2, cysk_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014556)
HIX0226414
HIT000703901 (
ENST00000592080
)
(Conserved hypothetical protein.)
genome : 582,836 - 583,498 (663)
query : 1 - 663 (663/663)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 4.5, cyto_nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226414)
HIX0039954
HIT000198192 (
NM_001194
)
(Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; Brain cyclic nucleotide-gated channel 2; BCNG-2;)
genome : 589,893 - 617,158 (27,266)
query : 1 - 3,407 (3,407/3,459)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, E.R. 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039954)
HIX0039954
HIT000244590
(
AJ012582
)
Representative transcript
(Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2.)
genome : 589,893 - 617,158 (27,266)
query : 1 - 3,407 (3,407/3,459)
8 exons
identity = 0.999
5'(1.000;0.998;1.000;1.000;1.000;1.000;0.994;
0.998)3'
coverage = 1.000
InterPro :
IPR000595 : Cyclic nucleotide-binding domain
IPR003938 : Potassium channel, voltage-dependent, EAG/ELK/ERG
IPR005821 : Ion transport domain
IPR013621 : Ion transport N-terminal
IPR014710 : RmlC-like jelly roll fold
IPR018488 : Cyclic nucleotide-binding, conserved site
IPR018490 : Cyclic nucleotide-binding-like
GO :
0005216 : Molecular Function : ion channel activity
0005249 : Molecular Function : voltage-gated potassium channel activity
0006811 : Biological Process : ion transport
0006813 : Biological Process : potassium ion transport
0016020 : Cellular Component : membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039954)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AB164197
Mus
sp. (Mouse) : AJ225122
Canis
sp. (Dog) : AY686751
Bos
sp. (Cow) : ENSBTAT00000020032
Gallus
sp. (Chicken) : ENSGALT00000002048
Oryzias
sp. (Medaka) : ENSORLT00000005410
Oryzias
sp. (Medaka) : ENSORLT00000019258
Pongo
sp. (Orangutan) : ENSPPYT00000010831
Tetraodon
sp. (Tetraodon) : GSTENT00028506001
Takifugu
sp. (Fugu) : SINFRUT00000181888
Danio
sp. (Zebrafish) : XM_001344957
Monodelphis
sp. (Opossum) : XM_001375838
HIX0039954
HIT000106129 (
ENST00000251287
)
(Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2; Brain cyclic nucleotide-gated channel 2; BCNG-2;)
genome : 589,893 - 617,159 (27,267)
query : 1 - 3,408 (3,408/3,408)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, E.R. 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039954)
HIX0039954
HIT000065514
(
AF065164
)
(Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2.)
genome : 589,911 - 617,141 (27,231)
query : 1 - 3,372 (3,372/3,372)
8 exons
identity = 0.998
5'(0.991;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR000595 : Cyclic nucleotide-binding domain
IPR003938 : Potassium channel, voltage-dependent, EAG/ELK/ERG
IPR005821 : Ion transport domain
IPR013621 : Ion transport N-terminal
IPR014710 : RmlC-like jelly roll fold
IPR018488 : Cyclic nucleotide-binding, conserved site
IPR018490 : Cyclic nucleotide-binding-like
GO :
0005216 : Molecular Function : ion channel activity
0005249 : Molecular Function : voltage-gated potassium channel activity
0006811 : Biological Process : ion transport
0006813 : Biological Process : potassium ion transport
0016020 : Cellular Component : membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039954)
HIX0039954
HIT000393895
(
DQ854815
)
(Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2.)
genome : 589,925 - 590,281 (357)
query : 1 - 357 (357/357)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039954)
HIX0039954
HIT000681202_02 (
ENST00000568218
)
(Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1; rbHCN1;)
genome : 590,082 - 616,473 (26,392)
query : 3 - 2,529 (2,527/2,529)
8 exons
identity = 0.951
5'(0.926;0.958;0.951;0.950;0.972;0.959;0.958;
0.956)3'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039954)
HIX0039954
HIT000701499 (
ENST00000589661
)
(Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2.)
genome : 590,277 - 591,603 (1,327)
query : 1 - 1,327 (1,327/1,327)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, mito 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039954)
HIX0039954
HIT000095851
(
BC039619
)
(Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2.)
genome : 590,380 - 616,032 (25,653)
query : 1 - 1,794 (1,794/1,794)
8 exons
identity = 0.999
5'(1.000;1.000;0.994;1.000;1.000;1.000;0.994;
1.000)3'
coverage = 1.000
InterPro :
IPR000595 : Cyclic nucleotide-binding domain
IPR003938 : Potassium channel, voltage-dependent, EAG/ELK/ERG
IPR005821 : Ion transport domain
IPR013621 : Ion transport N-terminal
IPR014710 : RmlC-like jelly roll fold
IPR018488 : Cyclic nucleotide-binding, conserved site
IPR018490 : Cyclic nucleotide-binding-like
GO :
0005216 : Molecular Function : ion channel activity
0005249 : Molecular Function : voltage-gated potassium channel activity
0006811 : Biological Process : ion transport
0006813 : Biological Process : potassium ion transport
0016020 : Cellular Component : membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039954)
HIX0039954
HIT000065468
(
AF064877
)
(Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2.)
genome : 590,382 - 616,032 (25,651)
query : 1 - 1,792 (1,792/1,792)
8 exons
identity = 0.994
5'(1.000;0.995;1.000;0.995;0.993;1.000;0.982;
0.987)3'
coverage = 1.000
InterPro :
IPR000595 : Cyclic nucleotide-binding domain
IPR003938 : Potassium channel, voltage-dependent, EAG/ELK/ERG
IPR005821 : Ion transport domain
IPR013621 : Ion transport N-terminal
IPR014710 : RmlC-like jelly roll fold
IPR018488 : Cyclic nucleotide-binding, conserved site
IPR018490 : Cyclic nucleotide-binding-like
GO :
0005216 : Molecular Function : ion channel activity
0005249 : Molecular Function : voltage-gated potassium channel activity
0006811 : Biological Process : ion transport
0006813 : Biological Process : potassium ion transport
0016020 : Cellular Component : membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039954)
HIX0039954
HIT000065462
(
AF064851
)
(Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2.)
genome : 607,953 - 616,040 (8,088)
query : 4 - 1,031 (1,028/1,031)
5 exons
identity = 0.996
5'(0.983;1.000;1.000;1.000;1.000)3'
coverage = 0.997
InterPro :
IPR000595 : Cyclic nucleotide-binding domain
IPR014710 : RmlC-like jelly roll fold
IPR018488 : Cyclic nucleotide-binding, conserved site
IPR018490 : Cyclic nucleotide-binding-like
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, E.R._mito 8.66667, mito 7.5,
mito_pero 7.16667, E.R. 4.5, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039954)
HIX0226408
HIT000703669 (
ENST00000591847
)
(Hypothetical protein.)
genome : 615,886 - 617,159 (1,274)
query : 1 - 506 (506/506)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 4, cyto_pero 3.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226408)
HIX0027511
HIT000384995
(
AK225865
)
(DNA-directed RNA polymerase, mitochondrial; MtRPOL; EC=2.7.7.6; Precursor;)
genome : 617,224 - 633,529 (16,306)
query : 1 - 1,651 (1,651/1,711)
13 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.980;0.917;0.998;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.7.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
InterPro :
IPR002092 : DNA-directed RNA polymerase, phage-type
GO :
0003677 : Molecular Function : DNA binding
0003899 : Molecular Function : DNA-directed RNA polymerase activity
0006351 : Biological Process : transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto_nucl 11.3333, mito 10.5,
cyto_mito 9.66667, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027511)
HIX0027511
HIT000221257
(
U75370
)
(DNA-directed RNA polymerase, mitochondrial; MtRPOL; EC=2.7.7.6; Precursor;)
genome : 617,225 - 633,541 (16,317)
query : 4 - 3,774 (3,771/3,832)
21 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.991;
1.000;0.994;1.000;1.000;0.996;0.996;1.000;
1.000;0.993;1.000;0.985;1.000;1.000;0.966)5'
coverage = 0.999
EC number :
EC 2.7.7.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
InterPro :
IPR002092 : DNA-directed RNA polymerase, phage-type
IPR024075 : DNA-directed RNA polymerase, helix hairpin domain
IPR029262 : DNA-directed RNA polymerase N-terminal domain
GO :
0003677 : Molecular Function : DNA binding
0003899 : Molecular Function : DNA-directed RNA polymerase activity
0006351 : Biological Process : transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto_nucl 11.5, mito 10, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027511)
HIX0027511
HIT000384853
(
AK225723
)
(DNA-directed RNA polymerase, mitochondrial; MtRPOL; EC=2.7.7.6; Precursor;)
genome : 617,224 - 633,529 (16,306)
query : 1 - 1,651 (1,651/1,688)
13 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.980;0.917;0.998;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.7.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
InterPro :
IPR002092 : DNA-directed RNA polymerase, phage-type
GO :
0003677 : Molecular Function : DNA binding
0003899 : Molecular Function : DNA-directed RNA polymerase activity
0006351 : Biological Process : transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto_nucl 11.3333, mito 10.5,
cyto_mito 9.66667, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027511)
HIX0027511
HIT000092242
(
BC030829
)
(DNA-directed RNA polymerase, mitochondrial; MtRPOL; EC=2.7.7.6; Precursor;)
genome : 617,224 - 633,521 (16,298)
query : 1 - 3,751 (3,751/3,783)
21 exons
identity = 0.999
3'(1.000;1.000;0.988;1.000;0.990;1.000;1.000;
1.000;1.000;1.000;1.000;0.999;1.000;0.994;
1.000;1.000;1.000;1.000;0.998;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.7.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
InterPro :
IPR002092 : DNA-directed RNA polymerase, phage-type
IPR024075 : DNA-directed RNA polymerase, helix hairpin domain
IPR029262 : DNA-directed RNA polymerase N-terminal domain
GO :
0003677 : Molecular Function : DNA binding
0003899 : Molecular Function : DNA-directed RNA polymerase activity
0006351 : Biological Process : transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, mito 11, cyto_nucl 11, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027511)
HIX0027511
HIT000050883
(
BC024170
)
(DNA-directed RNA polymerase, mitochondrial; MtRPOL; EC=2.7.7.6; Precursor;)
genome : 617,228 - 620,488 (3,261)
query : 7 - 1,106 (1,100/1,138)
11 exons
identity = 0.998
3'(1.000;1.000;0.988;1.000;1.000;1.000;0.991;
1.000;1.000;1.000;1.000)5'
coverage = 0.994
EC number :
EC 2.7.7.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
InterPro :
IPR002092 : DNA-directed RNA polymerase, phage-type
GO :
0003677 : Molecular Function : DNA binding
0003899 : Molecular Function : DNA-directed RNA polymerase activity
0006351 : Biological Process : transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 11.5, extr 7, cyto 5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027511)
HIX0027511
HIT000335941
(
BC098387
)
(DNA-directed RNA polymerase, mitochondrial; MtRPOL; EC=2.7.7.6; Precursor;)
genome : 617,223 - 633,547 (16,325)
query : 2 - 3,781 (3,780/3,797)
21 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.991;
1.000;1.000;1.000;1.000;0.997;0.991;1.000;
1.000;1.000;1.000;0.992;0.998;1.000;0.952)5'
coverage = 0.999
EC number :
EC 2.7.7.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
InterPro :
IPR002092 : DNA-directed RNA polymerase, phage-type
IPR024075 : DNA-directed RNA polymerase, helix hairpin domain
IPR029262 : DNA-directed RNA polymerase N-terminal domain
GO :
0003677 : Molecular Function : DNA binding
0003899 : Molecular Function : DNA-directed RNA polymerase activity
0006351 : Biological Process : transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, mito 11, cyto_nucl 11, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027511)
HIX0027511
HIT000264015
(
BC070057
)
Representative transcript
(DNA-directed RNA polymerase, mitochondrial; MtRPOL; EC=2.7.7.6; Precursor;)
genome : 617,228 - 633,568 (16,341)
query : 1 - 3,794 (3,794/3,810)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.7.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
InterPro :
IPR002092 : DNA-directed RNA polymerase, phage-type
IPR024075 : DNA-directed RNA polymerase, helix hairpin domain
IPR029262 : DNA-directed RNA polymerase N-terminal domain
GO :
0003677 : Molecular Function : DNA binding
0003899 : Molecular Function : DNA-directed RNA polymerase activity
0006351 : Biological Process : transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, mito_pero 10, nucl 5.5, cyto_nucl 4.5,
extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027511)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC117940
Canis
sp. (Dog) : ENSCAFT00000031345
Macaca
sp. (Macaque) : ENSMMUT00000020497
Oryzias
sp. (Medaka) : ENSORLT00000005425
Pongo
sp. (Orangutan) : ENSPPYT00000010832
Takifugu
sp. (Fugu) : SINFRUT00000168698
Rattus
sp. (Rat) : XM_001074109
Monodelphis
sp. (Opossum) : XM_001375825
Bos
sp. (Cow) : XM_580925
Danio
sp. (Zebrafish) : XM_680046
Pan
sp. (Chimpanzee) : XR_023708
HIX0027511
HIT000102911 (
ENST00000215591
)
(DNA-directed RNA polymerase, mitochondrial; MtRPOL; EC=2.7.7.6; Precursor;)
genome : 617,223 - 633,568 (16,346)
query : 1 - 3,800 (3,800/3,800)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.7.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, mito_pero 10, nucl 5.5, cyto_nucl 4.5,
extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027511)
HIX0027511
HIT000201753 (
NM_005035
)
(DNA-directed RNA polymerase, mitochondrial; MtRPOL; EC=2.7.7.6; Precursor;)
genome : 617,223 - 633,568 (16,346)
query : 1 - 3,800 (3,800/3,800)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.7.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, mito_pero 10, nucl 5.5, cyto_nucl 4.5,
extr 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027511)
HIX0027511
HIT000700489_02 (
ENST00000588649
)
(DNA-directed RNA polymerase, mitochondrial; MtRPOL; EC=2.7.7.6; Precursor;)
genome : 617,223 - 633,568 (16,346)
query : 1 - 3,800 (3,800/3,800)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.7.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, mito_pero 10, nucl 5.5, cyto_nucl 4.5,
extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027511)
HIX0027511
HIT000704451 (
ENST00000592633
)
(DNA-directed RNA polymerase, mitochondrial; MtRPOL; EC=2.7.7.6; Precursor;)
genome : 617,224 - 617,988 (765)
query : 1 - 460 (460/460)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.7.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, extr 4, cyto_nucl 3.16667, cyto_pero 2.83333,
nucl 2.5, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027511)
HIX0027511
HIT000497501
(
AK302877
)
(DNA-directed RNA polymerase, mitochondrial; MtRPOL; EC=2.7.7.6; Precursor;)
genome : 617,225 - 633,565 (16,341)
query : 1 - 2,888 (2,888/2,888)
15 exons
identity = 0.993
3'(1.000;1.000;0.988;1.000;1.000;0.998;0.991;
1.000;1.000;0.993;1.000;0.992;0.997;1.000;
0.909)5'
coverage = 1.000
EC number :
EC 2.7.7.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
InterPro :
IPR002092 : DNA-directed RNA polymerase, phage-type
IPR024075 : DNA-directed RNA polymerase, helix hairpin domain
IPR029262 : DNA-directed RNA polymerase N-terminal domain
GO :
0003677 : Molecular Function : DNA binding
0003899 : Molecular Function : DNA-directed RNA polymerase activity
0006351 : Biological Process : transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, nucl 11, cyto_nucl 10.5, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027511)
HIX0027511
HIT000329855
(
AB209920
)
(DNA-directed RNA polymerase, mitochondrial; MtRPOL; EC=2.7.7.6; Precursor;)
genome : 617,225 - 629,889 (12,665)
query : 1 - 3,270 (3,270/3,270)
19 exons
identity = 0.998
3'(1.000;1.000;0.988;1.000;1.000;1.000;0.991;
1.000;1.000;1.000;1.000;0.996;0.996;1.000;
1.000;1.000;1.000;0.992;0.997)5'
coverage = 1.000
EC number :
EC 2.7.7.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
InterPro :
IPR002092 : DNA-directed RNA polymerase, phage-type
IPR024075 : DNA-directed RNA polymerase, helix hairpin domain
IPR029262 : DNA-directed RNA polymerase N-terminal domain
GO :
0003677 : Molecular Function : DNA binding
0003899 : Molecular Function : DNA-directed RNA polymerase activity
0006351 : Biological Process : transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 15, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027511)
HIX0027511
HIT000698902 (
ENST00000587057
)
(DNA-directed RNA polymerase, mitochondrial; MtRPOL; EC=2.7.7.6; Precursor;)
genome : 617,227 - 618,751 (1,525)
query : 1 - 1,223 (1,223/1,223)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.7.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, nucl 8, mito 8, mito_nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027511)
HIX0027511
HIT000701798 (
ENST00000589961
)
(DNA-directed RNA polymerase, mitochondrial; MtRPOL; EC=2.7.7.6; Precursor;)
genome : 617,269 - 617,802 (534)
query : 1 - 350 (350/350)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.7.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, nucl 8, mito 8, mito_nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027511)
HIX0027511
HIT000690697_02 (
ENST00000578759
)
(DNA-directed RNA polymerase, mitochondrial; MtRPOL; EC=2.7.7.6; Precursor;)
genome : 617,277 - 633,488 (16,212)
query : 1 - 3,668 (3,668/3,668)
21 exons
identity = 0.978
3'(1.000;0.968;0.988;0.959;0.980;1.000;0.965;
0.989;0.961;0.984;0.992;0.977;0.969;0.982;
0.970;0.973;0.979;0.985;0.984;0.981;0.953)5'
coverage = 1.000
EC number :
EC 2.7.7.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 12.5, cyto 6, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027511)
HIX0027511
HIT000702169 (
ENST00000590336
)
(DNA-directed RNA polymerase, mitochondrial; MtRPOL; EC=2.7.7.6; Precursor;)
genome : 617,278 - 618,746 (1,469)
query : 1 - 429 (429/429)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.7.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 13, extr 6, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027511)
HIX0027511
HIT000698233 (
ENST00000586384
)
(DNA-directed RNA polymerase, mitochondrial; MtRPOL; EC=2.7.7.6; Precursor;)
genome : 621,600 - 625,086 (3,487)
query : 1 - 1,326 (1,326/1,326)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.7.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24.5, cyto_mito 14, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027511)
HIX0027511
HIT000426391
(
AK307525
)
(DNA-directed RNA polymerase, mitochondrial; MtRPOL; EC=2.7.7.6; Precursor;)
genome : 621,733 - 633,513 (11,781)
query : 1 - 1,965 (1,965/2,086)
10 exons
identity = 0.996
3'(0.982;0.991;1.000;1.000;1.000;1.000;0.992;
0.998;0.990;1.000)5'
coverage = 0.942
EC number :
EC 2.7.7.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
InterPro :
IPR002092 : DNA-directed RNA polymerase, phage-type
IPR029262 : DNA-directed RNA polymerase N-terminal domain
GO :
0003677 : Molecular Function : DNA binding
0003899 : Molecular Function : DNA-directed RNA polymerase activity
0006351 : Biological Process : transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12, nucl 11, cyto 11, mito 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027511)
HIX0027511
HIT000702536_02 (
ENST00000590709
)
(DNA-directed RNA polymerase, mitochondrial; MtRPOL; EC=2.7.7.6; Precursor;)
genome : 622,535 - 625,254 (2,720)
query : 1 - 851 (851/851)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.7.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 9.5, extr 7, mito 5, nucl 2.5,
E.R._mito 2.5, mito_pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027511)
HIX0027511
HIT000702401_02 (
ENST00000590573
)
(DNA-directed RNA polymerase, mitochondrial; MtRPOL; EC=2.7.7.6; Precursor;)
genome : 623,461 - 630,168 (6,708)
query : 1 - 1,048 (1,048/1,048)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.7.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 10, extr 8, mito 4, extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027511)
HIX0027511
HIT000700470 (
ENST00000588630
)
(DNA-directed RNA polymerase, mitochondrial; MtRPOL; EC=2.7.7.6; Precursor;)
genome : 624,725 - 625,509 (785)
query : 1 - 567 (567/567)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.7.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 13, extr 5, nucl 3, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027511)
HIX0027511
HIT000704681 (
ENST00000592863
)
(DNA-directed RNA polymerase, mitochondrial; MtRPOL; EC=2.7.7.6; Precursor;)
genome : 630,099 - 633,525 (3,427)
query : 1 - 501 (501/501)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.7.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027511)
HIX0040330
HIT000260030
(
BC059953
)
Representative transcript
(Hypothetical short protein.)
genome : 637,105 - 637,537 (433)
query : 1 - 433 (433/448)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 12.5, cyto 9, extr 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040330)
HIX0040330
HIT000677369 (
ENST00000564240
)
(Hypothetical short protein.)
genome : 637,105 - 637,537 (433)
query : 1 - 433 (433/433)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 12.5, cyto 9, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040330)
HIX0039926
HIT000697896 (
ENST00000586042
)
(Fibroblast growth factor 22; FGF-22; Precursor;)
genome : 639,588 - 643,703 (4,116)
query : 1 - 927 (927/927)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, extr 12, pero 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039926)
HIX0039926
HIT000096618
(
BC041334
)
(Fibroblast growth factor 22; FGF-22; Precursor;)
genome : 639,879 - 641,575 (1,697)
query : 1 - 1,697 (1,697/1,712)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 1.000
InterPro :
IPR002209 : Fibroblast growth factor family
IPR008996 : Cytokine, IL-1-like
IPR028296 : Fibroblast growth factor 22
GO :
0005104 : Molecular Function : fibroblast growth factor receptor binding
0005576 : Cellular Component : extracellular region
0008083 : Molecular Function : growth factor activity
0008543 : Biological Process : fibroblast growth factor receptor signaling pathway
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 8, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039926)
HIX0039926
HIT000703213 (
ENST00000591390
)
(Fibroblast growth factor 22; FGF-22; Precursor;)
genome : 639,879 - 641,575 (1,697)
query : 1 - 1,697 (1,697/1,712)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, mito 11, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039926)
HIX0039926
HIT000102901 (
ENST00000215530
)
(Fibroblast growth factor 22; FGF-22; Precursor;)
genome : 639,895 - 643,703 (3,809)
query : 1 - 643 (643/643)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 11.5, cyto_mito 6.5, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039926)
HIX0039926
HIT000501346
(
BC137444
)
Representative transcript
(Fibroblast growth factor 22; FGF-22; Precursor;)
genome : 639,895 - 643,703 (3,809)
query : 1 - 643 (643/643)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002209 : Fibroblast growth factor family
IPR008996 : Cytokine, IL-1-like
IPR028142 : IL-1 family/FGF family
IPR028296 : Fibroblast growth factor 22
GO :
0005102 : Molecular Function : receptor binding
0005104 : Molecular Function : fibroblast growth factor receptor binding
0005576 : Cellular Component : extracellular region
0008083 : Molecular Function : growth factor activity
0008543 : Biological Process : fibroblast growth factor receptor signaling pathway
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 11.5, cyto_mito 6.5, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039926)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AB078902
Danio
sp. (Zebrafish) : AB254028
Mus
sp. (Mouse) : AK008922
Bos
sp. (Cow) : ENSBTAT00000039235
Gallus
sp. (Chicken) : ENSGALT00000002107
Macaca
sp. (Macaque) : ENSMMUT00000012116
Oryzias
sp. (Medaka) : ENSORLT00000005428
Pongo
sp. (Orangutan) : ENSPPYT00000010833
Tetraodon
sp. (Tetraodon) : GSTENT00020123001
Takifugu
sp. (Fugu) : SINFRUT00000127541
Monodelphis
sp. (Opossum) : XM_001375809
Pan
sp. (Chimpanzee) : XM_524019
Canis
sp. (Dog) : XM_850137
HIX0039926
HIT000501347
(
BC137445
)
(Fibroblast growth factor 22; FGF-22; Precursor;)
genome : 639,895 - 643,703 (3,809)
query : 1 - 643 (643/643)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002209 : Fibroblast growth factor family
IPR008996 : Cytokine, IL-1-like
IPR028142 : IL-1 family/FGF family
IPR028296 : Fibroblast growth factor 22
GO :
0005102 : Molecular Function : receptor binding
0005104 : Molecular Function : fibroblast growth factor receptor binding
0005576 : Cellular Component : extracellular region
0008083 : Molecular Function : growth factor activity
0008543 : Biological Process : fibroblast growth factor receptor signaling pathway
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 11.5, cyto_mito 6.5, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039926)
HIX0039926
HIT000503044
(
BC144645
)
(Fibroblast growth factor 22; FGF-22; Precursor;)
genome : 639,895 - 643,703 (3,809)
query : 1 - 620 (620/620)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002209 : Fibroblast growth factor family
IPR008996 : Cytokine, IL-1-like
IPR028296 : Fibroblast growth factor 22
GO :
0005104 : Molecular Function : fibroblast growth factor receptor binding
0005576 : Cellular Component : extracellular region
0008083 : Molecular Function : growth factor activity
0008543 : Biological Process : fibroblast growth factor receptor signaling pathway
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, extr 12, pero 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039926)
HIX0039926
HIT000253128
(
AY359084
)
(Fibroblast growth factor 22; FGF-22; Precursor;)
genome : 639,920 - 643,605 (3,686)
query : 1 - 520 (520/520)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002209 : Fibroblast growth factor family
IPR008996 : Cytokine, IL-1-like
IPR028142 : IL-1 family/FGF family
IPR028296 : Fibroblast growth factor 22
GO :
0005102 : Molecular Function : receptor binding
0005104 : Molecular Function : fibroblast growth factor receptor binding
0005576 : Cellular Component : extracellular region
0008083 : Molecular Function : growth factor activity
0008543 : Biological Process : fibroblast growth factor receptor signaling pathway
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 11.5, cyto_mito 6.5, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039926)
HIX0039926
HIT000058715
(
AB021925
)
(Fibroblast growth factor 22; FGF-22; Precursor;)
genome : 639,926 - 643,604 (3,679)
query : 1 - 513 (513/513)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002209 : Fibroblast growth factor family
IPR008996 : Cytokine, IL-1-like
IPR028142 : IL-1 family/FGF family
IPR028296 : Fibroblast growth factor 22
GO :
0005102 : Molecular Function : receptor binding
0005104 : Molecular Function : fibroblast growth factor receptor binding
0005576 : Cellular Component : extracellular region
0008083 : Molecular Function : growth factor activity
0008543 : Biological Process : fibroblast growth factor receptor signaling pathway
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 11.5, cyto_mito 6.5, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039926)
HIX0039926
HIT000207994 (
NM_020637
)
(Fibroblast growth factor 22; FGF-22; Precursor;)
genome : 639,926 - 643,604 (3,679)
query : 1 - 513 (513/513)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 11.5, cyto_mito 6.5, pero 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039926)
HIX0039926
HIT000102490 (
ENST00000166133
)
(Fibroblast growth factor 22; FGF-22; Precursor;)
genome : 641,178 - 643,703 (2,526)
query : 1 - 489 (489/489)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 17, cyto_nucl 14.5, cyto 10, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039926)
HIX0202873
HIT000047462
(
AK127589
)
Representative transcript
(Conserved hypothetical protein.)
genome : 644,371 - 647,309 (2,939)
query : 1 - 2,895 (2,895/2,895)
2 exons
identity = 0.993
3'(0.982;0.994)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, cyto 15, nucl 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202873)
HIX0014558
HIT000319095 (
NM_194460
)
(Conserved hypothetical protein.)
genome : 647,527 - 663,233 (15,707)
query : 1 - 1,649 (1,649/1,665)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.3333, cyto 7, extr 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014558)
HIX0014558
HIT000036441
(
BC013977
)
(RING finger protein 126;)
genome : 647,529 - 663,180 (15,652)
query : 62 - 1,655 (1,594/1,672)
9 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.984;
1.000;0.993)5'
coverage = 0.963
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.3333, cyto 7, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014558)
HIX0014558
HIT000030418
(
BC001442
)
Representative transcript
(RING finger protein 126;)
genome : 647,533 - 663,206 (15,674)
query : 1 - 1,415 (1,415/1,431)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 15.8333, cyto 8.5, extr 6,
cyto_pero 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014558)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ720373
Mus
sp. (Mouse) : BC016543
Rattus
sp. (Rat) : BC099810
Bos
sp. (Cow) : BC122844
Oryzias
sp. (Medaka) : ENSORLT00000005327
Pongo
sp. (Orangutan) : ENSPPYT00000010834
Tetraodon
sp. (Tetraodon) : GSTENT00020130001
Tetraodon
sp. (Tetraodon) : GSTENT00028505001
Takifugu
sp. (Fugu) : SINFRUT00000156172
Takifugu
sp. (Fugu) : SINFRUT00000163573
Macaca
sp. (Macaque) : XM_001091389
Monodelphis
sp. (Opossum) : XM_001365631
Equus
sp. (Horse) : XM_001914701
Canis
sp. (Dog) : XM_542219
Pan
sp. (Chimpanzee) : XR_020769
HIX0014558
HIT000113564 (
ENST00000292363
)
(Conserved hypothetical protein.)
genome : 647,526 - 663,209 (15,684)
query : 1 - 1,626 (1,626/1,626)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.3333, cyto 7, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014558)
HIX0014558
HIT000250509
(
AL360265
)
(RING finger protein 126.)
genome : 647,530 - 650,594 (3,065)
query : 1 - 2,092 (2,092/2,092)
4 exons
identity = 1.000
3'(1.000;1.000;0.999;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, extr 7, cyto 3.5, extr_plas 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014558)
HIX0014558
HIT000698595 (
ENST00000586749
)
(Conserved hypothetical protein.)
genome : 647,530 - 650,594 (3,065)
query : 1 - 2,092 (2,092/2,092)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, extr 7, cyto 3.5, extr_plas 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014558)
HIX0014558
HIT000422413
(
AK289616
)
(RING finger protein 126.)
genome : 647,810 - 663,233 (15,424)
query : 1 - 1,366 (1,366/1,450)
9 exons
identity = 0.998
3'(0.998;1.000;0.989;1.000;1.000;1.000;1.000;
0.983;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.3333, cyto 7, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014558)
HIX0014558
HIT000003034
(
AK000559
)
(RING finger protein 126;)
genome : 647,810 - 663,184 (15,375)
query : 1 - 1,317 (1,317/1,362)
9 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.983;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.3333, cyto 7, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014558)
HIX0014558
HIT000039911
(
BC025374
)
(RING finger protein 126;)
genome : 647,810 - 663,156 (15,347)
query : 5 - 1,293 (1,289/1,322)
9 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000;1.000;0.984;
1.000;1.000)5'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.3333, cyto 7, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014558)
HIX0014558
HIT000702711 (
ENST00000590885
)
(Conserved hypothetical protein.)
genome : 647,842 - 651,917 (4,076)
query : 1 - 1,086 (1,086/1,086)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 5, cyto_nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014558)
HIX0014558
HIT000703274 (
ENST00000591452
)
(Conserved hypothetical protein.)
genome : 648,099 - 649,119 (1,021)
query : 1 - 533 (533/533)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, extr 9, cyto_nucl 3.66667, cyto 3.5,
cyto_pero 3.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014558)
HIX0014558
HIT000701600 (
ENST00000589762
)
(Conserved hypothetical protein.)
genome : 649,679 - 663,205 (13,527)
query : 1 - 579 (579/579)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.3333, cyto 11.5, nucl 9, extr 7,
cyto_pero 6.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014558)
HIX0014558
HIT000704236 (
ENST00000592418
)
(Conserved hypothetical protein.)
genome : 649,679 - 661,402 (11,724)
query : 1 - 477 (477/477)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 8.5, cyto 7.5, cyto_nucl 7.5, cyto_pero 6.66667,
extr 6, nucl 5, E.R._mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014558)
HIX0014558
HIT000703217 (
ENST00000591394
)
(Conserved hypothetical protein.)
genome : 651,385 - 663,184 (11,800)
query : 1 - 732 (732/732)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.8333, nucl 12, extr 11, cyto 7.5,
cyto_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014558)
HIX0014558
HIT000703179 (
ENST00000591356
)
(Conserved hypothetical protein.)
genome : 651,610 - 662,890 (11,281)
query : 1 - 548 (548/548)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014558)
HIX0014558
HIT000704444 (
ENST00000592626
)
(Conserved hypothetical protein.)
genome : 652,358 - 663,163 (10,806)
query : 1 - 644 (644/644)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 10.8333, extr 9, cyto 4,
cyto_pero 2.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014558)
HIX0014558
HIT000332683
(
AY927521
)
(Hypothetical protein.)
genome : 652,364 - 652,704 (341)
query : 2 - 342 (341/343)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, cyto_nucl 9.66667, cyto 8.5, nucl 7.5,
cyto_pero 6, mito 5, extr_plas 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014558)
HIX0014559
HIT000020886
(
AK096031
)
Representative transcript
(Conserved hypothetical protein.)
genome : 663,482 - 668,063 (4,582)
query : 1 - 1,882 (1,882/1,882)
2 exons
identity = 0.993
5'(0.987;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014559)
HIX0014559
HIT000703688 (
ENST00000591866
)
(Conserved hypothetical protein.)
genome : 663,482 - 668,063 (4,582)
query : 1 - 1,882 (1,882/1,882)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014559)
HIX0014560
HIT000202511 (
NM_005860
)
(Follistatin-related protein 3; Follistatin-like protein 3; Follistatin-related gene protein; Precursor;)
genome : 676,389 - 683,392 (7,004)
query : 1 - 2,511 (2,511/2,525)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 7, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014560)
HIX0014560
HIT000102491 (
ENST00000166139
)
(Follistatin-related protein 3; Follistatin-like protein 3; Follistatin-related gene protein; Precursor;)
genome : 676,392 - 683,385 (6,994)
query : 1 - 2,501 (2,501/2,501)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 7, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014560)
HIX0014560
HIT000424755
(
AK291958
)
(Follistatin-related protein 3; Follistatin-like protein 3; Follistatin-related gene protein; Precursor;)
genome : 676,392 - 682,082 (5,691)
query : 1 - 1,198 (1,198/1,198)
5 exons
identity = 0.999
5'(1.000;1.000;0.995;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002350 : Kazal domain
IPR003645 : Follistatin-like, N-terminal
IPR015369 : Follistatin/Osteonectin EGF domain
IPR017878 : TB domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 7, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014560)
HIX0014560
HIT000432207
(
AK313341
)
(Follistatin-related protein 3; Follistatin-like protein 3; Follistatin-related gene protein; Precursor;)
genome : 676,392 - 681,708 (5,317)
query : 1 - 823 (823/823)
5 exons
identity = 0.998
5'(0.993;0.995;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002350 : Kazal domain
IPR003645 : Follistatin-like, N-terminal
IPR015369 : Follistatin/Osteonectin EGF domain
IPR017878 : TB domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 7, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014560)
HIX0014560
HIT000032470
(
BC005839
)
(Follistatin-related protein 3; Follistatin-like protein 3; Follistatin-related gene protein; Precursor;)
genome : 676,403 - 683,385 (6,983)
query : 1 - 2,490 (2,490/2,516)
5 exons
identity = 0.998
5'(1.000;1.000;0.995;1.000;0.998)3'
coverage = 0.997
InterPro :
IPR002350 : Kazal domain
IPR003645 : Follistatin-like, N-terminal
IPR015369 : Follistatin/Osteonectin EGF domain
IPR017878 : TB domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 7, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014560)
HIX0014560
HIT000252961
(
AY358917
)
Representative transcript
(Follistatin-related protein 3; Follistatin-like protein 3; Follistatin-related gene protein; Precursor;)
genome : 676,408 - 683,390 (6,983)
query : 1 - 2,490 (2,490/2,498)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.997
InterPro :
IPR002350 : Kazal domain
IPR003645 : Follistatin-like, N-terminal
IPR015369 : Follistatin/Osteonectin EGF domain
IPR017878 : TB domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 7, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014560)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AB071603
Mus
sp. (Mouse) : AK087247
Bos
sp. (Cow) : BC116095
Danio
sp. (Zebrafish) : BC134879
Canis
sp. (Dog) : ENSCAFT00000035683
Oryzias
sp. (Medaka) : ENSORLT00000005286
Pongo
sp. (Orangutan) : ENSPPYT00000010835
Tetraodon
sp. (Tetraodon) : GSTENT00020131001
Takifugu
sp. (Fugu) : SINFRUT00000163433
Macaca
sp. (Macaque) : XM_001117132
Gallus
sp. (Chicken) : XM_001233760
Monodelphis
sp. (Opossum) : XM_001375766
Pan
sp. (Chimpanzee) : XR_023732
HIX0014560
HIT000041809
(
BC033119
)
(Follistatin-related protein 3; Follistatin-like protein 3; Follistatin-related gene protein; Precursor;)
genome : 676,417 - 683,385 (6,969)
query : 1 - 2,476 (2,476/2,509)
5 exons
identity = 0.998
5'(1.000;1.000;0.995;1.000;0.998)3'
coverage = 0.995
InterPro :
IPR002350 : Kazal domain
IPR003645 : Follistatin-like, N-terminal
IPR015369 : Follistatin/Osteonectin EGF domain
IPR017878 : TB domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 7, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014560)
HIX0014560
HIT000221318
(
U76702
)
(Follistatin-related protein 3; Follistatin-like protein 3; Follistatin-related gene protein; Precursor;)
genome : 676,417 - 683,385 (6,969)
query : 1 - 2,476 (2,476/2,500)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.999)3'
coverage = 0.990
InterPro :
IPR002350 : Kazal domain
IPR003645 : Follistatin-like, N-terminal
IPR015369 : Follistatin/Osteonectin EGF domain
IPR017878 : TB domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 7, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014560)
HIX0014560
HIT000703374 (
ENST00000591552
)
(Follistatin-related protein 3; Follistatin-like protein 3; Follistatin-related gene protein; Precursor;)
genome : 677,942 - 682,046 (4,105)
query : 1 - 775 (775/775)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 2.5, cyto_nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014560)
HIX0014560
HIT000700613 (
ENST00000588773
)
(Conserved hypothetical protein.)
genome : 678,061 - 681,794 (3,734)
query : 1 - 612 (612/612)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, mito 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014560)
HIX0014560
HIT000701024 (
ENST00000589185
)
(Follistatin-related protein 3; Follistatin-like protein 3; Follistatin-related gene protein; Precursor;)
genome : 680,034 - 681,756 (1,723)
query : 1 - 880 (880/880)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 14, extr 4, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014560)
HIX0014560
HIT000430432
(
AK311566
)
(Follistatin-related protein 3; Follistatin-like protein 3; Follistatin-related gene protein; Precursor;)
genome : 680,715 - 682,205 (1,491)
query : 1 - 949 (949/949)
3 exons
identity = 0.996
5'(0.988;0.996;0.998)3'
coverage = 1.000
InterPro :
IPR002350 : Kazal domain
IPR003645 : Follistatin-like, N-terminal
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 9, nucl 8.5, extr_plas 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014560)
HIX0014560
HIT000704765 (
ENST00000592947
)
(Follistatin-related protein 3; Follistatin-like protein 3; Follistatin-related gene protein; Precursor;)
genome : 680,715 - 682,205 (1,491)
query : 1 - 949 (949/949)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 9, nucl 8.5, extr_plas 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014560)
HIX0014560
HIT000703879 (
ENST00000592058
)
(Follistatin; FS; Activin-binding protein; XFS-319; Precursor;)
genome : 680,715 - 681,943 (1,229)
query : 1 - 582 (582/582)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 9, extr_plas 9, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014560)
HIX0014560
HIT000430387
(
AK311521
)
(Follistatin-related protein 3; Follistatin-like protein 3; Follistatin-related gene protein; Precursor;)
genome : 680,718 - 681,990 (1,273)
query : 1 - 731 (731/731)
3 exons
identity = 0.997
5'(0.994;0.996;1.000)3'
coverage = 1.000
InterPro :
IPR002350 : Kazal domain
IPR003645 : Follistatin-like, N-terminal
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 9, nucl 8.5, extr_plas 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014560)
HIX0014560
HIT000703395 (
ENST00000591573
)
(Follistatin-related protein 3; Follistatin-like protein 3; Follistatin-related gene protein; Precursor;)
genome : 680,751 - 681,771 (1,021)
query : 1 - 568 (568/568)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 12.5, cyto_nucl 11, cyto 6.5,
extr_plas 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014560)
HIX0014560
HIT000024070
(
AL050194
)
(Hypothetical short protein.)
genome : 683,006 - 683,385 (380)
query : 1 - 379 (379/403)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 0.979
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, mito 10, cyto 7, mito_nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014560)
HIX0040064
HIT000126028 (
ENST00000329267
)
(Serine protease 57 precursor.)
genome : 685,521 - 695,460 (9,940)
query : 1 - 1,077 (1,077/1,077)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, pero 3, mito 2, cyto_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040064)
HIX0040064
HIT000252638
(
AY358594
)
Representative transcript
(Serine protease 57 precursor.)
genome : 685,546 - 695,495 (9,950)
query : 7 - 1,090 (1,084/1,114)
5 exons
identity = 0.985
3'(1.000;0.996;0.993;1.000;0.903)5'
coverage = 0.994
InterPro :
IPR001254 : Peptidase S1
IPR001314 : Peptidase S1A, chymotrypsin-type
IPR009003 : Trypsin-like cysteine/serine peptidase domain
IPR018114 : Peptidase S1, trypsin family, active site
GO :
0003824 : Molecular Function : catalytic activity
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, pero 3, mito 2, cyto_nucl 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040064)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC116380
Tetraodon
sp. (Tetraodon) : CR729166
Danio
sp. (Zebrafish) : ENSDART00000088077
Equus
sp. (Horse) : ENSECAT00000010115
Oryzias
sp. (Medaka) : ENSORLT00000020234
Pongo
sp. (Orangutan) : ENSPPYT00000010836
Rattus
sp. (Rat) : ENSRNOT00000038553
Takifugu
sp. (Fugu) : SINFRUT00000155761
Macaca
sp. (Macaque) : XM_001117143
Pan
sp. (Chimpanzee) : XM_001146596
Monodelphis
sp. (Opossum) : XM_001375747
Gallus
sp. (Chicken) : XM_423728
Canis
sp. (Dog) : XM_542217
Bos
sp. (Cow) : XM_593377
HIX0040064
HIT000320612 (
NM_214710
)
(Serine protease 57 precursor.)
genome : 685,546 - 695,461 (9,916)
query : 1 - 1,053 (1,053/1,073)
5 exons
identity = 0.999
3'(1.000;0.996;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, pero 3, mito 2, cyto_nucl 2, lyso 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040064)
HIX0040064
HIT000502914
(
BC144505
)
(Serine protease 57 precursor.)
genome : 685,571 - 695,461 (9,891)
query : 3 - 1,027 (1,025/1,027)
5 exons
identity = 0.997
3'(1.000;0.992;0.993;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR001254 : Peptidase S1
IPR001314 : Peptidase S1A, chymotrypsin-type
IPR009003 : Trypsin-like cysteine/serine peptidase domain
IPR018114 : Peptidase S1, trypsin family, active site
GO :
0003824 : Molecular Function : catalytic activity
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, pero 3, mito 2, lyso 2, cyto_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040064)
HIX0040064
HIT000501119
(
BC137161
)
(Serine protease 57 precursor.)
genome : 685,578 - 695,461 (9,884)
query : 3 - 1,023 (1,021/1,023)
5 exons
identity = 0.998
3'(1.000;0.996;0.993;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR001254 : Peptidase S1
IPR001314 : Peptidase S1A, chymotrypsin-type
IPR009003 : Trypsin-like cysteine/serine peptidase domain
IPR018114 : Peptidase S1, trypsin family, active site
GO :
0003824 : Molecular Function : catalytic activity
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, pero 3, mito 2, cyto_nucl 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040064)
HIX0138004
HIT000574126 (
ENST00000469610
)
(Ribosomal protein S5, N-terminal domain containing protein.)
genome : 690,381 - 691,175 (795)
query : 1 - 795 (795/795)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 14, cyto 9, extr_plas 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0138004)
HIX0138004
pHIT000031164 ( pHIT000031164 )
Representative transcript
(Conserved hypothetical protein.)
genome : 690,533 - 690,952 (420)
query : 1 - 420 (420/420)
1 exon
InterPro :
IPR000851 : Ribosomal protein S5
IPR013810 : Ribosomal protein S5, N-terminal
IPR014720 : Double-stranded RNA-binding domain
IPR014721 : Ribosomal protein S5 domain 2-type fold, subgroup
GO :
0003723 : Molecular Function : RNA binding
0003735 : Molecular Function : structural constituent of ribosome
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
SOSUI :
MEMBRANE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0138004)
CAGE tag :
H10BA13L1608
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : XR_013496
HIX0014561
HIT000199468 (
NM_002579
)
(Paralemmin-1; Paralemmin; Precursor;)
genome : 708,953 - 748,330 (39,378)
query : 1 - 2,874 (2,874/2,890)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 17.5, cyto 8.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014561)
HIX0014561
HIT000366675 (
NM_001040134
)
(Paralemmin-1 isoform 2.)
genome : 708,953 - 748,330 (39,378)
query : 1 - 2,742 (2,742/2,758)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 17.5, cyto 6.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014561)
HIX0014561
HIT000109350 (
ENST00000264560
)
(Paralemmin-1 isoform 2.)
genome : 708,953 - 748,328 (39,376)
query : 1 - 2,740 (2,740/2,740)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 17.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014561)
HIX0014561
HIT000699063 (
ENST00000587219
)
(Paralemmin-1; Paralemmin; Precursor;)
genome : 708,975 - 727,390 (18,416)
query : 1 - 612 (612/612)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 16.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014561)
HIX0014561
HIT000494433
(
AK299809
)
(Paralemmin-1; Paralemmin; Precursor;)
genome : 709,097 - 735,048 (25,952)
query : 1 - 1,346 (1,346/1,346)
6 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR004965 : Paralemmin
GO :
0008360 : Biological Process : regulation of cell shape
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 14.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014561)
HIX0014561
HIT000704688 (
ENST00000592870
)
(Paralemmin-1; Paralemmin; Precursor;)
genome : 709,097 - 735,048 (25,952)
query : 1 - 1,346 (1,346/1,346)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 14.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014561)
HIX0014561
HIT000131078 (
ENST00000338448
)
(Paralemmin-1; Paralemmin; Precursor;)
genome : 709,101 - 748,329 (39,229)
query : 1 - 2,725 (2,725/2,725)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 17.5, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014561)
HIX0014561
HIT000434034
(
AK315168
)
(Paralemmin-1; Paralemmin; Precursor;)
genome : 709,101 - 746,814 (37,714)
query : 1 - 1,210 (1,210/1,210)
9 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.992;1.000)3'
coverage = 1.000
InterPro :
IPR004965 : Paralemmin
GO :
0008360 : Biological Process : regulation of cell shape
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 17.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014561)
HIX0014561
HIT000041541
(
BC032449
)
Representative transcript
(Paralemmin-1; Paralemmin; Precursor;)
genome : 709,105 - 748,329 (39,225)
query : 1 - 2,721 (2,721/2,765)
9 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.999)3'
coverage = 1.000
InterPro :
IPR004965 : Paralemmin
GO :
0008360 : Biological Process : regulation of cell shape
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 17.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014561)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK037044
Danio
sp. (Zebrafish) : BC056777
Rattus
sp. (Rat) : BC072525
Danio
sp. (Zebrafish) : BC092750
Pongo
sp. (Orangutan) : ENSPPYT00000010837
Macaca
sp. (Macaque) : XM_001117149
Bos
sp. (Cow) : XM_001253884
Monodelphis
sp. (Opossum) : XM_001375678
Pan
sp. (Chimpanzee) : XM_524021
Canis
sp. (Dog) : XM_542216
Gallus
sp. (Chicken) : Y14769
HIX0014561
HIT000325838
(
Y14770
)
(Paralemmin-1; Paralemmin; Precursor;)
genome : 709,120 - 748,329 (39,210)
query : 1 - 2,706 (2,706/2,731)
9 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.999)3'
coverage = 1.000
InterPro :
IPR004965 : Paralemmin
GO :
0008360 : Biological Process : regulation of cell shape
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 17.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014561)
HIX0014561
HIT000697909 (
ENST00000586055
)
(Hypothetical protein.)
genome : 719,078 - 726,173 (7,096)
query : 1 - 616 (616/616)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, extr 11, cyto 11, nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014561)
HIX0014561
HIT000698622 (
ENST00000586776
)
(Non-protein coding transcript.)
genome : 722,504 - 727,088 (4,585)
query : 1 - 537 (537/537)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014561)
HIX0014561
HIT000089924
(
BC019596
)
(Paralemmin-1 isoform 2.)
genome : 726,138 - 748,326 (22,189)
query : 95 - 2,569 (2,475/2,598)
7 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 0.963
InterPro :
IPR004965 : Paralemmin
GO :
0008360 : Biological Process : regulation of cell shape
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014561)
HIX0014561
HIT000325929
(
Y16278
)
(Paralemmin-1 isoform 2.)
genome : 726,138 - 746,814 (20,677)
query : 6 - 1,032 (1,027/1,032)
7 exons
identity = 0.998
5'(1.000;1.000;1.000;0.993;1.000;1.000;0.998)3'
coverage = 0.995
InterPro :
IPR004965 : Paralemmin
GO :
0008360 : Biological Process : regulation of cell shape
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 17.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014561)
HIX0014561
HIT000700852 (
ENST00000589012
)
(Paralemmin-1; Paralemmin; Precursor;)
genome : 726,138 - 736,139 (10,002)
query : 1 - 558 (558/558)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 15, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014561)
HIX0014561
HIT000042403
(
D87460
)
(Paralemmin-1; Paralemmin; Precursor;)
genome : 727,562 - 748,328 (20,767)
query : 11 - 2,552 (2,542/2,552)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.996
InterPro :
IPR004965 : Paralemmin
GO :
0008360 : Biological Process : regulation of cell shape
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, nucl 15, cyto_golg 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014561)
HIX0014561
HIT000006193
(
AK022919
)
(Paralemmin-1 isoform 2.)
genome : 727,562 - 748,328 (20,767)
query : 7 - 2,416 (2,410/2,416)
5 exons
identity = 0.998
5'(1.000;0.993;1.000;1.000;0.998)3'
coverage = 0.998
InterPro :
IPR004965 : Paralemmin
GO :
0008360 : Biological Process : regulation of cell shape
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014561)
HIX0014561
HIT000495805
(
AK301181
)
(Paralemmin-1; Paralemmin; Precursor;)
genome : 727,786 - 747,298 (19,513)
query : 1 - 1,458 (1,458/1,458)
6 exons
identity = 0.997
5'(1.000;0.993;1.000;1.000;1.000;0.997)3'
coverage = 1.000
InterPro :
IPR004965 : Paralemmin
GO :
0008360 : Biological Process : regulation of cell shape
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 14, cyto 10.5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014561)
HIX0014561
HIT000704990 (
ENST00000593172
)
(Paralemmin-1; Paralemmin; Precursor;)
genome : 727,786 - 747,298 (19,513)
query : 1 - 1,458 (1,458/1,458)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 15.5, cyto 11, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014561)
HIX0014561
HIT000703975 (
ENST00000592155
)
(Paralemmin-1; Paralemmin; Precursor;)
genome : 735,030 - 746,771 (11,742)
query : 1 - 714 (714/714)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto 6, cyto_nucl 5.5, nucl 3, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014561)
HIX0014561
HIT000701996 (
ENST00000590161
)
(Paralemmin-1 isoform 2.)
genome : 735,033 - 746,771 (11,739)
query : 1 - 579 (579/579)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto 11, cyto_nucl 10, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014561)
HIX0014561
HIT000699356 (
ENST00000587513
)
(Paralemmin-1; Paralemmin; Precursor;)
genome : 735,055 - 746,609 (11,555)
query : 1 - 573 (573/573)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto 10, mito_pero 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014561)
HIX0027524
HIT000053750
(
BC052236
)
Representative transcript
(Uncharacterized protein C19orf21;)
genome : 751,126 - 764,318 (13,193)
query : 1 - 2,871 (2,871/2,896)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR029304 : A-kinase anchor protein 2, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 15.5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027524)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC013508
Bos
sp. (Cow) : BC107524
Pongo
sp. (Orangutan) : CR858675
Canis
sp. (Dog) : ENSCAFT00000035975
Gallus
sp. (Chicken) : ENSGALT00000002936
Macaca
sp. (Macaque) : ENSMMUT00000032205
Pan
sp. (Chimpanzee) : ENSPTRT00000018653
Rattus
sp. (Rat) : XM_001077148
Danio
sp. (Zebrafish) : XM_690985
HIX0027524
HIT000102909 (
ENST00000215582
)
(Uncharacterized protein C19orf21;)
genome : 751,126 - 764,318 (13,193)
query : 1 - 2,871 (2,871/2,871)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 15.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027524)
HIX0027524
HIT000057036
(
BX648389
)
(Uncharacterized protein C19orf21;)
genome : 751,133 - 764,318 (13,186)
query : 2 - 2,865 (2,864/2,886)
5 exons
identity = 0.998
5'(1.000;0.998;1.000;1.000;0.996)3'
coverage = 0.999
InterPro :
IPR029304 : A-kinase anchor protein 2, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 15.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027524)
HIX0027524
HIT000052651
(
BC042125
)
(Uncharacterized protein C19orf21;)
genome : 751,146 - 764,318 (13,173)
query : 1 - 2,851 (2,851/2,907)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR029304 : A-kinase anchor protein 2, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 15.5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027524)
HIX0027524
HIT000214869 (
NM_173481
)
(Uncharacterized protein C19orf21;)
genome : 751,146 - 764,318 (13,173)
query : 1 - 2,851 (2,851/2,907)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 15.5, cyto 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027524)
HIX0027524
HIT000057462
(
BX648815
)
(Uncharacterized protein C19orf21;)
genome : 757,643 - 764,317 (6,675)
query : 1 - 2,071 (2,071/2,098)
4 exons
identity = 1.000
5'(0.999;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR029304 : A-kinase anchor protein 2, C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 17, cyto 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027524)
HIX0040334
HIT000261084
(
BC063630
)
Representative transcript
(Conserved hypothetical protein.)
genome : 781,002 - 781,862 (861)
query : 1 - 856 (856/911)
1 exon
identity = 0.992
3'(0.992)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040334)
HIX0226243
HIT000697915 (
ENST00000586061
)
(Hypothetical short protein.)
genome : 782,796 - 785,080 (2,285)
query : 1 - 829 (829/829)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 11.5, mito 8, cyto_nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226243)
HIX0226410
HIT000703740 (
ENST00000591918
)
(Non-protein coding transcript.)
genome : 786,650 - 787,037 (388)
query : 1 - 388 (388/388)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0226410)
HIX0014562
HIT000310868 (
ENST00000356948
)
(Polypyrimidine tract-binding protein 1 isoform a.)
genome : 797,075 - 812,327 (15,253)
query : 1 - 3,598 (3,598/3,598)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, nucl 15, cyto 12, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014562)
HIX0014562
HIT000199694 (
NM_002819
)
(Polypyrimidine tract-binding protein 1 isoform a.)
genome : 797,392 - 812,327 (14,936)
query : 1 - 3,281 (3,281/3,340)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, nucl 15, cyto 12, extr 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014562)
HIX0014562
HIT000210326 (
NM_031990
)
(Polypyrimidine tract-binding protein 1 isoform b.)
genome : 797,392 - 812,327 (14,936)
query : 1 - 3,260 (3,260/3,319)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, nucl 15, cyto 12, extr 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014562)
HIX0014562
HIT000210327 (
NM_031991
)
(Polypyrimidine tract-binding protein 1; PTB; 57 kDa RNA-binding protein PPTB-1; Heterogeneous nuclear ribonucleoprotein I; hnRNP I;)
genome : 797,392 - 812,327 (14,936)
query : 1 - 3,203 (3,203/3,262)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 15, cyto 13
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014562)
HIX0014562
HIT000307900 (
ENST00000350092
)
(Polypyrimidine tract-binding protein 1; PTB; Heterogeneous nuclear ribonucleoprotein I; hnRNP I;)
genome : 797,392 - 812,327 (14,936)
query : 1 - 2,201 (2,201/2,201)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, mito 10, extr 4, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014562)
HIX0014562
HIT000322851
(
X66975
)
Representative transcript
(Polypyrimidine tract-binding protein 1 isoform a.)
genome : 797,411 - 812,327 (14,917)
query : 2 - 3,260 (3,259/3,319)
15 exons
identity = 0.994
5'(0.989;1.000;1.000;1.000;0.993;0.988;1.000;
1.000;1.000;1.000;1.000;1.000;0.995;1.000;
0.991)3'
coverage = 0.999
InterPro :
IPR000504 : RNA recognition motif domain
IPR006536 : HnRNP-L/PTB/hephaestus splicing factor
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0003723 : Molecular Function : RNA binding
0005634 : Cellular Component : nucleus
0006397 : Biological Process : mRNA processing
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, nucl 15, cyto 12, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014562)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ851444
Mus
sp. (Mouse) : AK053926
Rattus
sp. (Rat) : BC061858
Danio
sp. (Zebrafish) : BC095372
Mus
sp. (Mouse) : D38580
Oryzias
sp. (Medaka) : ENSORLT00000017576
Pongo
sp. (Orangutan) : ENSPPYT00000010839
Tetraodon
sp. (Tetraodon) : GSTENT00035072001
Takifugu
sp. (Fugu) : SINFRUT00000172685
Macaca
sp. (Macaque) : XM_001092088
Pan
sp. (Chimpanzee) : XM_001172084
Monodelphis
sp. (Opossum) : XM_001375547
Equus
sp. (Horse) : XM_001915426
Canis
sp. (Dog) : XM_542215
HIX0014562
HIT000030860
(
BC002397
)
(Polypyrimidine tract-binding protein 1 isoform a.)
genome : 797,425 - 812,312 (14,888)
query : 1 - 3,230 (3,230/3,281)
15 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.998)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR006536 : HnRNP-L/PTB/hephaestus splicing factor
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0003723 : Molecular Function : RNA binding
0005634 : Cellular Component : nucleus
0006397 : Biological Process : mRNA processing
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, nucl 15, cyto 12, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014562)
HIX0014562
HIT000307726 (
ENST00000349038
)
(Polypyrimidine tract-binding protein 1; PTB; 57 kDa RNA-binding protein PPTB-1; Heterogeneous nuclear ribonucleoprotein I; hnRNP I;)
genome : 797,425 - 812,312 (14,888)
query : 1 - 3,155 (3,155/3,155)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 15, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014562)
HIX0014562
HIT000702713 (
ENST00000590887
)
(Polypyrimidine tract-binding protein 1; PTB; 57 kDa RNA-binding protein PPTB-1; Heterogeneous nuclear ribonucleoprotein I; hnRNP I;)
genome : 797,425 - 804,582 (7,158)
query : 1 - 642 (642/642)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25.5, mito_pero 14, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014562)
HIX0014562
HIT000090743
(
BC023219
)
(Polypyrimidine tract-binding protein 1 isoform a.)
genome : 797,427 - 811,287 (13,861)
query : 2 - 2,207 (2,206/2,207)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR006536 : HnRNP-L/PTB/hephaestus splicing factor
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0003723 : Molecular Function : RNA binding
0005634 : Cellular Component : nucleus
0006397 : Biological Process : mRNA processing
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, nucl 15, cyto 12, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014562)
HIX0014562
HIT000698327 (
ENST00000586481
)
(Polypyrimidine tract-binding protein 1; PTB; 57 kDa RNA-binding protein PPTB-1; Heterogeneous nuclear ribonucleoprotein I; hnRNP I;)
genome : 797,427 - 804,939 (7,513)
query : 1 - 757 (757/757)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 10, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014562)
HIX0014562
HIT000698789 (
ENST00000586944
)
(Polypyrimidine tract-binding protein 1; PTB; 57 kDa RNA-binding protein PPTB-1; Heterogeneous nuclear ribonucleoprotein I; hnRNP I;)
genome : 797,428 - 811,289 (13,862)
query : 1 - 4,661 (4,661/4,661)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24.5, mito_pero 13.5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014562)
HIX0014562
HIT000697391 (
ENST00000585535
)
(Polypyrimidine tract-binding protein 1; PTB; 57 kDa RNA-binding protein PPTB-1; Heterogeneous nuclear ribonucleoprotein I; hnRNP I;)
genome : 797,432 - 804,702 (7,271)
query : 1 - 765 (765/765)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 12.5, cyto 10.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014562)
HIX0014562
HIT000328845
(
AB208910
)
(Polypyrimidine tract-binding protein 1; PTB; 57 kDa RNA-binding protein PPTB-1; Heterogeneous nuclear ribonucleoprotein I; hnRNP I;)
genome : 797,446 - 811,289 (13,844)
query : 1 - 4,643 (4,643/4,643)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR006536 : HnRNP-L/PTB/hephaestus splicing factor
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0003723 : Molecular Function : RNA binding
0005634 : Cellular Component : nucleus
0006397 : Biological Process : mRNA processing
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21.5, mito_pero 11.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014562)
HIX0014562
HIT000322500
(
X62006
)
(Polypyrimidine tract-binding protein 1; PTB; 57 kDa RNA-binding protein PPTB-1; Heterogeneous nuclear ribonucleoprotein I; hnRNP I;)
genome : 797,452 - 812,312 (14,861)
query : 1 - 3,116 (3,116/3,131)
14 exons
identity = 0.991
5'(0.963;0.968;1.000;1.000;0.993;0.994;1.000;
1.000;1.000;1.000;1.000;0.991;1.000;0.986)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR006536 : HnRNP-L/PTB/hephaestus splicing factor
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0003723 : Molecular Function : RNA binding
0005634 : Cellular Component : nucleus
0006397 : Biological Process : mRNA processing
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 15, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014562)
HIX0014562
HIT000322742
(
X65371
)
(Polypyrimidine tract-binding protein 1 isoform b.)
genome : 797,452 - 812,312 (14,861)
query : 1 - 3,173 (3,173/3,188)
15 exons
identity = 0.991
5'(0.963;0.968;1.000;1.000;0.993;0.994;1.000;
1.000;1.000;1.000;1.000;1.000;0.991;1.000;
0.986)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR006536 : HnRNP-L/PTB/hephaestus splicing factor
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0003723 : Molecular Function : RNA binding
0005634 : Cellular Component : nucleus
0006397 : Biological Process : mRNA processing
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, nucl 15, cyto 12, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014562)
HIX0014562
HIT000322743
(
X65372
)
(Polypyrimidine tract-binding protein 1 isoform a.)
genome : 797,452 - 812,312 (14,861)
query : 1 - 3,194 (3,194/3,209)
15 exons
identity = 0.991
5'(0.963;0.968;1.000;1.000;0.993;0.994;1.000;
1.000;1.000;1.000;1.000;1.000;0.991;1.000;
0.986)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR006536 : HnRNP-L/PTB/hephaestus splicing factor
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0003723 : Molecular Function : RNA binding
0005634 : Cellular Component : nucleus
0006397 : Biological Process : mRNA processing
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, nucl 15, cyto 12, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014562)
HIX0014562
HIT000478007 (
ENST00000394601
)
(Polypyrimidine tract-binding protein 1 isoform b.)
genome : 797,452 - 812,312 (14,861)
query : 1 - 3,185 (3,185/3,185)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, nucl 15, cyto 12, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014562)
HIX0014562
HIT000701413 (
ENST00000589575
)
(Polypyrimidine tract-binding protein 1; PTB; 57 kDa RNA-binding protein PPTB-1; Heterogeneous nuclear ribonucleoprotein I; hnRNP I;)
genome : 797,462 - 804,939 (7,478)
query : 1 - 744 (744/744)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11, nucl 10, cyto 8, extr 7, cysk 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014562)
HIX0014562
HIT000322410
(
X60648
)
(Polypyrimidine tract-binding protein 1; PTB; 57 kDa RNA-binding protein PPTB-1; Heterogeneous nuclear ribonucleoprotein I; hnRNP I;)
genome : 797,469 - 812,312 (14,844)
query : 1 - 3,087 (3,087/3,090)
14 exons
identity = 0.989
5'(0.973;1.000;1.000;1.000;0.993;0.994;1.000;
1.000;1.000;1.000;1.000;0.995;1.000;0.981)3'
coverage = 0.999
InterPro :
IPR000504 : RNA recognition motif domain
IPR006536 : HnRNP-L/PTB/hephaestus splicing factor
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0003723 : Molecular Function : RNA binding
0005634 : Cellular Component : nucleus
0006397 : Biological Process : mRNA processing
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 15, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014562)
HIX0014562
HIT000036329
(
BC013694
)
(Polypyrimidine tract-binding protein 1 isoform a.)
genome : 797,479 - 811,013 (13,535)
query : 1 - 1,880 (1,880/1,917)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR006536 : HnRNP-L/PTB/hephaestus splicing factor
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0003723 : Molecular Function : RNA binding
0005634 : Cellular Component : nucleus
0006397 : Biological Process : mRNA processing
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, nucl 15, cyto 12, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014562)
HIX0014562
HIT000031907
(
BC004383
)
(Polypyrimidine tract-binding protein 1; PTB; 57 kDa RNA-binding protein PPTB-1; Heterogeneous nuclear ribonucleoprotein I; hnRNP I;)
genome : 797,482 - 812,222 (14,741)
query : 1 - 3,007 (3,007/3,057)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR006536 : HnRNP-L/PTB/hephaestus splicing factor
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0003723 : Molecular Function : RNA binding
0005634 : Cellular Component : nucleus
0006397 : Biological Process : mRNA processing
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 15, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014562)
HIX0014562
HIT000698939 (
ENST00000587094
)
(Polypyrimidine tract-binding protein 1; PTB; 57 kDa RNA-binding protein PPTB-1; Heterogeneous nuclear ribonucleoprotein I; hnRNP I;)
genome : 798,428 - 804,083 (5,656)
query : 1 - 273 (273/273)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10.5, nucl 10, extr 9, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014562)
HIX0014562
HIT000699035 (
ENST00000587191
)
(Polypyrimidine tract-binding protein 1; PTB; 57 kDa RNA-binding protein PPTB-1; Heterogeneous nuclear ribonucleoprotein I; hnRNP I;)
genome : 799,409 - 808,762 (9,354)
query : 17 - 361 (345/361)
3 exons
identity = 0.997
5'(0.971;1.000;1.000)3'
coverage = 0.956
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22.5, mito_nucl 14, nucl 4.5, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014562)
HIX0014562
HIT000099739
(
BT006819
)
(Polypyrimidine tract-binding protein 1 isoform a.)
genome : 799,409 - 810,826 (11,418)
query : 5 - 1,674 (1,670/1,674)
14 exons
identity = 0.999
5'(0.971;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.998
InterPro :
IPR000504 : RNA recognition motif domain
IPR006536 : HnRNP-L/PTB/hephaestus splicing factor
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
0003723 : Molecular Function : RNA binding
0005634 : Cellular Component : nucleus
0006397 : Biological Process : mRNA processing
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, nucl 15, cyto 12, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014562)
HIX0014562
HIT000703934 (
ENST00000592113
)
(Polypyrimidine tract-binding protein 3 isoform 4.)
genome : 803,575 - 805,141 (1,567)
query : 1 - 969 (969/969)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 14.5, nucl 8.5, mito 2, cysk 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014562)
HIX0014562
HIT000697810 (
ENST00000585956
)
(Polypyrimidine tract-binding protein 1; PTB; 57 kDa RNA-binding protein PPTB-1; Heterogeneous nuclear ribonucleoprotein I; hnRNP I;)
genome : 804,623 - 808,646 (4,024)
query : 1 - 767 (767/767)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_pero 8.83333, mito 8.5,
cyto_nucl 8.16667, E.R._mito 5, extr 4, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014562)
HIX0014562
HIT000698980 (
ENST00000587136
)
(Conserved hypothetical protein.)
genome : 804,858 - 806,660 (1,803)
query : 1 - 583 (583/583)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 8.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014562)
HIX0014562
HIT000704622 (
ENST00000592804
)
(Polypyrimidine tract-binding protein 1; PTB; Heterogeneous nuclear ribonucleoprotein I; hnRNP I;)
genome : 804,918 - 806,036 (1,119)
query : 1 - 742 (742/742)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, cyto 13.5, nucl 11.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014562)
HIX0014562
HIT000689558 (
ENST00000577608
)
(Non-protein coding transcript.)
genome : 804,940 - 805,001 (62)
query : 1 - 62 (62/62)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014562)
HIX0014562
HIT000725963 (
NR_039900
)
(Non-protein coding transcript.)
genome : 804,940 - 805,001 (62)
query : 1 - 62 (62/62)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014562)
HIX0014562
HIT000701407 (
ENST00000589569
)
(Polypyrimidine tract-binding protein 1 isoform a.)
genome : 805,119 - 806,045 (927)
query : 1 - 602 (602/602)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 12.5, mito 8, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014562)
HIX0014562
HIT000701721 (
ENST00000589883
)
(Polypyrimidine tract-binding protein 1 isoform a.)
genome : 805,508 - 807,028 (1,521)
query : 1 - 683 (683/683)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 11, cyto 6, mito_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014562)
HIX0014562
HIT000701608 (
ENST00000589770
)
(Polypyrimidine tract-binding protein 1; PTB; 57 kDa RNA-binding protein PPTB-1; Heterogeneous nuclear ribonucleoprotein I; hnRNP I;)
genome : 807,570 - 808,733 (1,164)
query : 1 - 614 (614/614)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, mito_nucl 15.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014562)
HIX0014562
HIT000697786 (
ENST00000585932
)
(Polypyrimidine tract-binding protein 1; PTB; 57 kDa RNA-binding protein PPTB-1; Heterogeneous nuclear ribonucleoprotein I; hnRNP I;)
genome : 807,859 - 808,667 (809)
query : 1 - 716 (716/716)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27, nucl 2, cyto 2, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014562)
HIX0014562
HIT000697710 (
ENST00000585856
)
(Polypyrimidine tract-binding protein 1; PTB; 57 kDa RNA-binding protein PPTB-1; Heterogeneous nuclear ribonucleoprotein I; hnRNP I;)
genome : 808,285 - 811,021 (2,737)
query : 1 - 791 (791/791)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014562)
HIX0014563
HIT000078317
(
AF357888
)
(Lipid phosphate phosphatase-related protein type 3; EC=3.1.3.4; PAP-2-like protein 2; Plasticity-related gene 2 protein; PRG-2;)
genome : 812,435 - 821,967 (9,533)
query : 1 - 2,703 (2,703/2,703)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;0.993;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.4
KEGG pathway :
00561 : Glycerolipid metabolism (35)
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014563)
HIX0014563
HIT000037927
(
BC017295
)
(Lipid phosphate phosphatase-related protein type 3 isoform 2.)
genome : 812,488 - 813,823 (1,336)
query : 1 - 1,336 (1,336/1,355)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
EC number :
EC 3.1.3.4
KEGG pathway :
00561 : Glycerolipid metabolism (35)
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
InterPro :
IPR028685 : Lipid phosphate phosphatase-related protein type 3
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 15.5, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014563)
HIX0014563
HIT000209570 (
NM_024888
)
(Lipid phosphate phosphatase-related protein type 3 isoform 1.)
genome : 812,488 - 821,952 (9,465)
query : 1 - 2,387 (2,387/2,405)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.4
KEGG pathway :
00561 : Glycerolipid metabolism (35)
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014563)
HIX0014563
HIT000724646 (
NM_001270366
)
(Lipid phosphate phosphatase-related protein type 3; EC=3.1.3.4; PAP-2-like protein 2; Plasticity-related gene 2 protein; PRG-2;)
genome : 812,488 - 821,952 (9,465)
query : 1 - 2,303 (2,303/2,321)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.4
KEGG pathway :
00561 : Glycerolipid metabolism (35)
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014563)
HIX0014563
HIT000087829
(
BC012339
)
(Lipid phosphate phosphatase-related protein type 3; EC=3.1.3.4; Plasticity-related gene 2 protein; PRG-2;)
genome : 812,488 - 815,244 (2,757)
query : 1 - 1,472 (1,472/1,490)
6 exons
identity = 0.999
3'(1.000;0.997;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.4
KEGG pathway :
00561 : Glycerolipid metabolism (35)
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
InterPro :
IPR000326 : Phosphatidic acid phosphatase type 2/haloperoxidase
IPR028685 : Lipid phosphate phosphatase-related protein type 3
GO :
0003824 : Molecular Function : catalytic activity
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 26, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014563)
HIX0014563
HIT000004871
(
AK021597
)
(Lipid phosphate phosphatase-related protein type 3 isoform 2.)
genome : 812,489 - 814,743 (2,255)
query : 1 - 1,503 (1,503/1,503)
4 exons
identity = 0.995
3'(0.995;0.995;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.4
KEGG pathway :
00561 : Glycerolipid metabolism (35)
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, E.R. 13, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014563)
HIX0014563
HIT000620201 (
ENST00000520876
)
(Lipid phosphate phosphatase-related protein type 3; EC=3.1.3.4; PAP-2-like protein 2; Plasticity-related gene 2 protein; PRG-2;)
genome : 812,518 - 821,978 (9,461)
query : 1 - 2,299 (2,299/2,299)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.4
KEGG pathway :
00561 : Glycerolipid metabolism (35)
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014563)
HIX0014563
HIT000025192
(
AL136596
)
(Lipid phosphate phosphatase-related protein type 3 isoform 1.)
genome : 812,518 - 821,952 (9,435)
query : 1 - 2,357 (2,357/2,357)
7 exons
identity = 1.000
3'(1.000;0.997;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.4
KEGG pathway :
00561 : Glycerolipid metabolism (35)
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
InterPro :
IPR000326 : Phosphatidic acid phosphatase type 2/haloperoxidase
IPR028685 : Lipid phosphate phosphatase-related protein type 3
GO :
0003824 : Molecular Function : catalytic activity
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014563)
HIX0014563
HIT000243771
(
AF541282
)
(Lipid phosphate phosphatase-related protein type 3 isoform 1.)
genome : 812,518 - 821,952 (9,435)
query : 1 - 2,357 (2,357/2,357)
7 exons
identity = 1.000
3'(1.000;0.997;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.4
KEGG pathway :
00561 : Glycerolipid metabolism (35)
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
InterPro :
IPR000326 : Phosphatidic acid phosphatase type 2/haloperoxidase
IPR028685 : Lipid phosphate phosphatase-related protein type 3
GO :
0003824 : Molecular Function : catalytic activity
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014563)
HIX0014563
HIT000251562
(
AY304517
)
(Lipid phosphate phosphatase-related protein type 3 isoform 1.)
genome : 812,518 - 821,952 (9,435)
query : 1 - 2,357 (2,357/2,357)
7 exons
identity = 1.000
3'(1.000;0.997;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.4
KEGG pathway :
00561 : Glycerolipid metabolism (35)
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
InterPro :
IPR000326 : Phosphatidic acid phosphatase type 2/haloperoxidase
IPR028685 : Lipid phosphate phosphatase-related protein type 3
GO :
0003824 : Molecular Function : catalytic activity
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014563)
HIX0014563
HIT000313356 (
ENST00000359894
)
(Lipid phosphate phosphatase-related protein type 3 isoform 1.)
genome : 812,518 - 821,952 (9,435)
query : 1 - 2,357 (2,357/2,357)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.4
KEGG pathway :
00561 : Glycerolipid metabolism (35)
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014563)
HIX0014563
HIT000254690
(
AY436785
)
Representative transcript
(Lipid phosphate phosphatase-related protein type 3; EC=3.1.3.4; PAP-2-like protein 2; Plasticity-related gene 2 protein; PRG-2;)
genome : 812,518 - 821,951 (9,434)
query : 1 - 2,272 (2,272/2,272)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.4
KEGG pathway :
00561 : Glycerolipid metabolism (35)
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
InterPro :
IPR000326 : Phosphatidic acid phosphatase type 2/haloperoxidase
IPR028685 : Lipid phosphate phosphatase-related protein type 3
GO :
0003824 : Molecular Function : catalytic activity
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014563)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AY147866
Mus
sp. (Mouse) : BC098099
Canis
sp. (Dog) : ENSCAFT00000031291
Equus
sp. (Horse) : ENSECAT00000007065
Oryzias
sp. (Medaka) : ENSORLT00000014332
Tetraodon
sp. (Tetraodon) : GSTENT00012705001
Macaca
sp. (Macaque) : XM_001117169
Monodelphis
sp. (Opossum) : XM_001365567
Pan
sp. (Chimpanzee) : XR_022330
HIX0212989
HIT000659417 (
NR_036154
)
(Non-protein coding transcript.)
genome : 813,584 - 813,653 (70)
query : 1 - 70 (70/70)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212989)
HIX0212989
HIT000695312 (
ENST00000583431
)
(Non-protein coding transcript.)
genome : 813,584 - 813,653 (70)
query : 1 - 70 (70/70)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212989)
HIX0212989
HIT000698426 (
ENST00000586580
)
(Non-protein coding transcript.)
genome : 813,584 - 813,653 (70)
query : 1 - 70 (70/70)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212989)
HIX0014563
HIT000620499 (
ENST00000521181
)
(Lipid phosphate phosphatase-related protein type 3 isoform 1.)
genome : 813,731 - 815,134 (1,404)
query : 1 - 646 (646/646)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.4
KEGG pathway :
00561 : Glycerolipid metabolism (35)
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014563)
HIX0014563
HIT000617059 (
ENST00000517665
)
(Lipid phosphate phosphatase-related protein type 3 isoform 2.)
genome : 813,758 - 814,749 (992)
query : 1 - 334 (334/334)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.4
KEGG pathway :
00561 : Glycerolipid metabolism (35)
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23.5, extr_plas 12.5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014563)
HIX0014563
HIT000618852 (
ENST00000519502
)
(Lipid phosphate phosphatase-related protein type 3 isoform 2.)
genome : 815,186 - 821,967 (6,782)
query : 1 - 811 (811/811)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.3.4
KEGG pathway :
00561 : Glycerolipid metabolism (35)
00564 : Glycerophospholipid metabolism (49)
00565 : Ether lipid metabolism (23)
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014563)
HIX0040110
HIT000097987
(
BC044940
)
(Azurocidin; Cationic antimicrobial protein CAP37; Heparin-binding protein; HBP;)
genome : 825,097 - 832,017 (6,921)
query : 1 - 1,715 (1,715/1,780)
4 exons
identity = 0.998
5'(1.000;1.000;0.993;0.998)3'
coverage = 0.999
InterPro :
IPR001254 : Peptidase S1
IPR009003 : Trypsin-like cysteine/serine peptidase domain
GO :
0003824 : Molecular Function : catalytic activity
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 11.5, cyto_nucl 10.5, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040110)
HIX0040110
HIT000704025 (
ENST00000592205
)
(Azurocidin; Cationic antimicrobial protein CAP37; Heparin-binding protein; HBP; Precursor;)
genome : 825,097 - 832,017 (6,921)
query : 1 - 1,713 (1,713/1,713)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 11.5, cyto_nucl 10.5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040110)
HIX0040110
HIT000104518 (
ENST00000233997
)
(Azurocidin; Cationic antimicrobial protein CAP37; Heparin-binding protein; HBP; Precursor;)
genome : 827,826 - 832,017 (4,192)
query : 1 - 917 (917/917)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, lyso 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040110)
HIX0040110
HIT000334906
(
BC093931
)
(Azurocidin; Cationic antimicrobial protein CAP37; Heparin-binding protein; HBP; Precursor;)
genome : 827,826 - 831,905 (4,080)
query : 1 - 805 (805/805)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001254 : Peptidase S1
IPR001314 : Peptidase S1A, chymotrypsin-type
IPR009003 : Trypsin-like cysteine/serine peptidase domain
GO :
0003824 : Molecular Function : catalytic activity
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, lyso 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040110)
HIX0040110
HIT000334908
(
BC093933
)
(Azurocidin; Cationic antimicrobial protein CAP37; Heparin-binding protein; HBP; Precursor;)
genome : 827,826 - 831,905 (4,080)
query : 1 - 805 (805/805)
5 exons
identity = 0.998
5'(1.000;1.000;0.993;0.996;1.000)3'
coverage = 1.000
InterPro :
IPR001254 : Peptidase S1
IPR001314 : Peptidase S1A, chymotrypsin-type
IPR009003 : Trypsin-like cysteine/serine peptidase domain
GO :
0003824 : Molecular Function : catalytic activity
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, lyso 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040110)
HIX0040110
HIT000198638 (
NM_001700
)
(Azurocidin; Cationic antimicrobial protein CAP37; Heparin-binding protein; HBP; Precursor;)
genome : 827,831 - 832,017 (4,187)
query : 1 - 912 (912/912)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, lyso 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0040110)
HIX0040110
HIT000263646
(
BC069495
)
Representative transcript
(Azurocidin; Cationic antimicrobial protein CAP37; Heparin-binding protein; HBP; Precursor;)
genome : 827,831 - 831,927 (4,097)
query : 1 - 822 (822/822)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001254 : Peptidase S1