bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0019803
HIT000215006 (
NM_173628
)
(Dynein heavy chain 17, axonemal; Axonemal beta dynein heavy chain 17; Axonemal dynein heavy chain-like protein 1; Ciliary dynein heavy chain 17; Ciliary dynein heavy chain-like protein 1; Dynein light chain 2, axonemal;)
genome : 76,419,778 - 76,573,476 (153,699)
query : 1 - 13,723 (13,723/13,723)
81 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 23, E.R. 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019803)
HIX0019803
HIT000396728 (
ENST00000389840
)
(Dynein heavy chain 17, axonemal; Axonemal beta dynein heavy chain 17; Axonemal dynein heavy chain-like protein 1; Ciliary dynein heavy chain 17; Ciliary dynein heavy chain-like protein 1; Dynein light chain 2, axonemal;)
genome : 76,419,778 - 76,573,476 (153,699)
query : 1 - 13,792 (13,792/13,792)
81 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 23, E.R. 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019803)
HIX0019803
HIT000697186 (
ENST00000585328
)
(Dynein heavy chain 17, axonemal; Axonemal beta dynein heavy chain 17; Axonemal dynein heavy chain-like protein 1; Ciliary dynein heavy chain 17; Ciliary dynein heavy chain-like protein 1; Dynein light chain 2, axonemal;)
genome : 76,419,778 - 76,573,476 (153,699)
query : 1 - 13,708 (13,708/13,708)
81 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 23, E.R. 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019803)
HIX0019803
HIT000699021 (
ENST00000587177
)
(Dynein heavy chain 17, axonemal; Axonemal beta dynein heavy chain 17; Axonemal dynein heavy chain-like protein 1; Ciliary dynein heavy chain 17; Ciliary dynein heavy chain-like protein 1; Dynein light chain 2, axonemal;)
genome : 76,498,225 - 76,506,753 (8,529)
query : 1 - 1,529 (1,529/1,529)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 9, pero 6, plas 3, mito 3,
nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019803)
HIX0225060
HIT000699464 (
ENST00000587621
)
(Conserved hypothetical protein.)
genome : 76,518,329 - 76,518,910 (582)
query : 1 - 582 (582/582)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225060)
HIX0224603
HIT000596212 (
ENST00000492744
)
(Non-protein coding transcript.)
genome : 76,528,875 - 76,529,137 (263)
query : 1 - 263 (263/263)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224603)
HIX0019803
HIT000022630
(
AK097776
)
(Dynein heavy chain 17, axonemal; Axonemal beta dynein heavy chain 17; Axonemal dynein heavy chain-like protein 1; Ciliary dynein heavy chain 17; Ciliary dynein heavy chain-like protein 1; Dynein light chain 2, axonemal;)
genome : 76,539,837 - 76,567,404 (27,568)
query : 1 - 1,846 (1,846/1,846)
13 exons
identity = 0.998
3'(1.000;0.990;0.991;1.000;1.000;0.996;1.000;
1.000;1.000;1.000;1.000;0.988;1.000)5'
coverage = 1.000
InterPro :
IPR013594 : Dynein heavy chain, domain-1
IPR026983 : Dynein heavy chain
GO :
0003777 : Molecular Function : microtubule motor activity
0007018 : Biological Process : microtubule-based movement
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 15.5, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019803)
HIX0019803
HIT000701631 (
ENST00000589793
)
(Dynein heavy chain 17, axonemal; Axonemal beta dynein heavy chain 17; Axonemal dynein heavy chain-like protein 1; Ciliary dynein heavy chain 17; Ciliary dynein heavy chain-like protein 1; Dynein light chain 2, axonemal;)
genome : 76,539,837 - 76,567,404 (27,568)
query : 1 - 1,846 (1,846/1,846)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 15.5, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019803)
HIX0019803
HIT000338195
(
BC105107
)
(Dynein heavy chain 17, axonemal; Axonemal beta dynein heavy chain 17; Axonemal dynein heavy chain-like protein 1; Ciliary dynein heavy chain 17; Ciliary dynein heavy chain-like protein 1; Dynein light chain 2, axonemal;)
genome : 76,539,856 - 76,567,116 (27,261)
query : 1 - 1,784 (1,784/1,784)
12 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.996;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR013594 : Dynein heavy chain, domain-1
IPR026983 : Dynein heavy chain
GO :
0003777 : Molecular Function : microtubule motor activity
0007018 : Biological Process : microtubule-based movement
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 12, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019803)
HIX0019803
HIT000340413
(
BC112284
)
(Dynein heavy chain 17, axonemal; Axonemal beta dynein heavy chain 17; Axonemal dynein heavy chain-like protein 1; Ciliary dynein heavy chain 17; Ciliary dynein heavy chain-like protein 1; Dynein light chain 2, axonemal;)
genome : 76,539,856 - 76,567,116 (27,261)
query : 1 - 1,784 (1,784/1,784)
12 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.996;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR013594 : Dynein heavy chain, domain-1
IPR026983 : Dynein heavy chain
GO :
0003777 : Molecular Function : microtubule motor activity
0007018 : Biological Process : microtubule-based movement
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 12, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019803)
HIX0019803
HIT000004716
(
AK021442
)
(Dynein heavy chain 17, axonemal; Axonemal beta dynein heavy chain 17; Axonemal dynein heavy chain-like protein 1; Ciliary dynein heavy chain 17; Ciliary dynein heavy chain-like protein 1; Dynein light chain 2, axonemal;)
genome : 76,568,125 - 76,570,584 (2,460)
query : 1 - 2,460 (2,460/2,460)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
InterPro :
IPR026983 : Dynein heavy chain
GO :
0003777 : Molecular Function : microtubule motor activity
0007018 : Biological Process : microtubule-based movement
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 10.5, nucl 10, cyto 7, extr_plas 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019803)
HIX0019803
eHIT000007186 ( ESTsASS_17_379 )
(Non-protein coding transcript.)
genome : 76,568,892 - 76,573,482 (4,591)
query : 1 - 561 (561/561)
3 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019803)
ESTs used for assembly :
DC400758,DB449557
HIX0224509
HIT000701860 (
ENST00000590023
)
(Hypothetical protein.)
genome : 76,613,471 - 76,626,252 (12,782)
query : 1 - 501 (501/501)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 9, cyto_nucl 9, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224509)
HIX0224509
HIT000703207 (
ENST00000591384
)
(Hypothetical protein.)
genome : 76,613,551 - 76,628,139 (14,589)
query : 1 - 867 (867/867)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 4, cyto 4, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224509)
HIX0224509
HIT000698037 (
ENST00000586185
)
(Conserved hypothetical protein.)
genome : 76,614,844 - 76,628,133 (13,290)
query : 1 - 877 (877/877)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 4, cyto 4, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224509)
HIX0021721
HIT000053462
(
BC050452
)
(Cytohesin-1; PH, SEC7 and coiled-coil domain-containing protein 1; SEC7 homolog B2-1;)
genome : 76,670,135 - 76,778,334 (108,200)
query : 1 - 3,264 (3,264/3,301)
13 exons
identity = 0.998
3'(0.999;1.000;1.000;1.000;0.974;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000904 : Sec7 domain
IPR001849 : Pleckstrin homology domain
IPR023394 : Sec7 domain, alpha orthogonal bundle
GO :
0005086 : Molecular Function : ARF guanyl-nucleotide exchange factor activity
0032012 : Biological Process : regulation of ARF protein signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 17.8333, nucl 13,
cyto_mito 10.3333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021721)
HIX0021721
HIT000064608
(
AF054997
)
(Hypothetical protein.)
genome : 76,670,132 - 76,671,848 (1,717)
query : 1 - 1,717 (1,717/1,743)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, extr 11, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021721)
HIX0021721
HIT000095184
(
BC038385
)
(Cytohesin-1; PH, SEC7 and coiled-coil domain-containing protein 1; SEC7 homolog B2-1;)
genome : 76,670,132 - 76,778,345 (108,214)
query : 1 - 3,277 (3,277/3,302)
13 exons
identity = 0.998
3'(0.999;1.000;1.000;1.000;0.974;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000904 : Sec7 domain
IPR001849 : Pleckstrin homology domain
IPR023394 : Sec7 domain, alpha orthogonal bundle
GO :
0005086 : Molecular Function : ARF guanyl-nucleotide exchange factor activity
0032012 : Biological Process : regulation of ARF protein signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 17.8333, nucl 13,
cyto_mito 10.3333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021721)
HIX0021721
HIT000027703
(
AL832791
)
(Hypothetical protein.)
genome : 76,670,132 - 76,673,666 (3,535)
query : 1 - 3,533 (3,533/3,553)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 5.5, cyto_nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021721)
HIX0021721
HIT000196609
(
M85169
)
Representative transcript
(Cytohesin-1; PH, SEC7 and coiled-coil domain-containing protein 1; SEC7 homolog B2-1;)
genome : 76,670,132 - 76,778,376 (108,245)
query : 1 - 3,301 (3,301/3,311)
13 exons
identity = 0.996
3'(0.996;1.000;1.000;1.000;0.974;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.978)5'
coverage = 1.000
InterPro :
IPR000904 : Sec7 domain
IPR001849 : Pleckstrin homology domain
IPR023394 : Sec7 domain, alpha orthogonal bundle
GO :
0005086 : Molecular Function : ARF guanyl-nucleotide exchange factor activity
0032012 : Biological Process : regulation of ARF protein signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 17.8333, nucl 13,
cyto_mito 10.3333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021721)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK078502
Danio
sp. (Zebrafish) : AY574952
Bos
sp. (Cow) : ENSBTAT00000008751
Gallus
sp. (Chicken) : ENSGALT00000038427
Monodelphis
sp. (Opossum) : ENSMODT00000002476
Oryzias
sp. (Medaka) : ENSORLT00000009696
Oryzias
sp. (Medaka) : ENSORLT00000011040
Oryzias
sp. (Medaka) : ENSORLT00000013656
Pongo
sp. (Orangutan) : ENSPPYT00000010149
Tetraodon
sp. (Tetraodon) : GSTENT00018578001
Takifugu
sp. (Fugu) : SINFRUT00000155818
Rattus
sp. (Rat) : XM_001081749
Macaca
sp. (Macaque) : XM_001108434
Equus
sp. (Horse) : XM_001490896
Pan
sp. (Chimpanzee) : XM_511712
Canis
sp. (Dog) : XM_843726
HIX0021721
HIT000701135 (
ENST00000589296
)
(Cytohesin-1; PH, SEC7 and coiled-coil domain-containing protein 1; SEC7 homolog B2-1;)
genome : 76,670,130 - 76,778,379 (108,250)
query : 1 - 2,159 (2,159/2,159)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021721)
HIX0021721
HIT000201496 (
NM_004762
)
(Cytohesin-1; PH, SEC7 and coiled-coil domain-containing protein 1; SEC7 homolog B2-1;)
genome : 76,670,130 - 76,778,376 (108,247)
query : 1 - 3,311 (3,311/3,311)
13 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.974;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 17.8333, nucl 13,
cyto_mito 10.3333
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021721)
HIX0021721
HIT000206412 (
NM_017456
)
(Cytohesin-1; PH, SEC7 and coiled-coil domain-containing protein 1; SEC7 homolog B2-1;)
genome : 76,670,130 - 76,778,376 (108,247)
query : 1 - 3,308 (3,308/3,308)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 17.8333, nucl 13,
cyto_mito 10.3333
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021721)
HIX0021721
HIT000314378 (
ENST00000361101
)
(Cytohesin-1; PH, SEC7 and coiled-coil domain-containing protein 1; SEC7 homolog B2-1;)
genome : 76,670,130 - 76,778,376 (108,247)
query : 1 - 3,311 (3,311/3,311)
13 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.974;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 17.8333, nucl 13,
cyto_mito 10.3333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021721)
HIX0021721
HIT000544802 (
ENST00000446868
)
(Cytohesin-1; PH, SEC7 and coiled-coil domain-containing protein 1; SEC7 homolog B2-1;)
genome : 76,670,130 - 76,778,376 (108,247)
query : 1 - 3,311 (3,311/3,311)
13 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.974;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 17.8333, nucl 13,
cyto_mito 10.3333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021721)
HIX0021721
HIT000703277 (
ENST00000591455
)
(Cytohesin-1; PH, SEC7 and coiled-coil domain-containing protein 1; SEC7 homolog B2-1;)
genome : 76,670,130 - 76,778,354 (108,225)
query : 1 - 3,286 (3,286/3,286)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 17.8333, nucl 13,
cyto_mito 10.3333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021721)
HIX0021721
HIT000701136 (
ENST00000589297
)
(Cytohesin-1 isoform 2.)
genome : 76,670,130 - 76,719,832 (49,703)
query : 1 - 3,756 (3,756/3,756)
13 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.974;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, cyto_nucl 15.5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021721)
HIX0021721
HIT000697365 (
ENST00000585509
)
(Cytohesin-1; PH, SEC7 and coiled-coil domain-containing protein 1; SEC7 homolog B2-1;)
genome : 76,670,130 - 76,713,107 (42,978)
query : 1 - 3,315 (3,315/3,315)
13 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.974;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 16.3333, cyto_mito 13.1667,
nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021721)
HIX0021721
HIT000043767
(
AK123894
)
(Conserved hypothetical protein.)
genome : 76,670,131 - 76,674,553 (4,423)
query : 1 - 4,421 (4,421/4,421)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, cyto 5.5, cyto_pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021721)
HIX0021721
HIT000698149 (
ENST00000586299
)
(Hypothetical protein.)
genome : 76,670,131 - 76,674,553 (4,423)
query : 1 - 4,423 (4,423/4,423)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, cyto 5.5, cyto_nucl 5.5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021721)
HIX0021721
HIT000016236
(
AK091369
)
(Cytohesin-1; PH, SEC7 and coiled-coil domain-containing protein 1; SEC7 homolog B2-1;)
genome : 76,670,132 - 76,672,987 (2,856)
query : 1 - 2,856 (2,856/2,856)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, extr 11, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021721)
HIX0021721
HIT000698027 (
ENST00000586175
)
(Cytohesin-1; PH, SEC7 and coiled-coil domain-containing protein 1; SEC7 homolog B2-1;)
genome : 76,671,738 - 76,688,575 (16,838)
query : 1 - 874 (874/874)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 12, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021721)
HIX0021721
HIT000488518
(
AK293894
)
(Cytohesin-1 isoform 2.)
genome : 76,671,844 - 76,719,832 (47,989)
query : 1 - 2,042 (2,042/2,042)
13 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;0.974;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000904 : Sec7 domain
IPR001849 : Pleckstrin homology domain
IPR023394 : Sec7 domain, alpha orthogonal bundle
GO :
0005086 : Molecular Function : ARF guanyl-nucleotide exchange factor activity
0032012 : Biological Process : regulation of ARF protein signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, cyto_nucl 15.5, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021721)
HIX0021721
HIT000499890
(
AK316277
)
(Cytohesin-1 isoform 2.)
genome : 76,671,882 - 76,719,646 (47,765)
query : 1 - 1,551 (1,551/1,551)
12 exons
identity = 0.994
3'(1.000;1.000;1.000;1.000;0.974;1.000;1.000;
1.000;1.000;1.000;1.000;0.959)5'
coverage = 1.000
InterPro :
IPR000904 : Sec7 domain
IPR001849 : Pleckstrin homology domain
IPR023394 : Sec7 domain, alpha orthogonal bundle
GO :
0005086 : Molecular Function : ARF guanyl-nucleotide exchange factor activity
0032012 : Biological Process : regulation of ARF protein signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021721)
HIX0021721
HIT000703396 (
ENST00000591574
)
(Cytohesin-2 isoform 2.)
genome : 76,671,902 - 76,778,371 (106,470)
query : 1 - 1,043 (1,043/1,043)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 12.5, extr 11, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021721)
HIX0021721
HIT000698278 (
ENST00000586430
)
(Cytohesin-1; PH, SEC7 and coiled-coil domain-containing protein 1; SEC7 homolog B2-1;)
genome : 76,671,930 - 76,677,148 (5,219)
query : 1 - 573 (573/573)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto 9.5, cyto_nucl 6, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021721)
HIX0021721
HIT000499688
(
AK316075
)
(Cytohesin-1 isoform 2.)
genome : 76,671,935 - 76,713,107 (41,173)
query : 1 - 1,511 (1,511/1,511)
13 exons
identity = 0.997
3'(0.997;1.000;0.986;1.000;0.974;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000904 : Sec7 domain
IPR001849 : Pleckstrin homology domain
IPR023394 : Sec7 domain, alpha orthogonal bundle
GO :
0005086 : Molecular Function : ARF guanyl-nucleotide exchange factor activity
0032012 : Biological Process : regulation of ARF protein signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 16.3333, cyto_mito 12.6667,
nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021721)
HIX0021721
HIT000426783
(
AK307917
)
(Cytohesin-1; PH, SEC7 and coiled-coil domain-containing protein 1; SEC7 homolog B2-1;)
genome : 76,672,062 - 76,778,353 (106,292)
query : 1 - 1,356 (1,356/1,356)
13 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;0.965;1.000;0.991;
1.000;1.000;1.000;0.985;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000904 : Sec7 domain
IPR001849 : Pleckstrin homology domain
IPR023394 : Sec7 domain, alpha orthogonal bundle
GO :
0005086 : Molecular Function : ARF guanyl-nucleotide exchange factor activity
0032012 : Biological Process : regulation of ARF protein signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 11.5, extr 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021721)
HIX0021721
HIT000491538
(
AK296914
)
(Cytohesin-1 isoform 2.)
genome : 76,672,161 - 76,778,347 (106,187)
query : 1 - 909 (909/909)
9 exons
identity = 0.988
3'(1.000;1.000;1.000;1.000;1.000;0.974;1.000;
0.938;1.000)5'
coverage = 1.000
InterPro :
IPR000904 : Sec7 domain
IPR001849 : Pleckstrin homology domain
IPR023394 : Sec7 domain, alpha orthogonal bundle
GO :
0005086 : Molecular Function : ARF guanyl-nucleotide exchange factor activity
0032012 : Biological Process : regulation of ARF protein signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto_nucl 4.5, cyto 3.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021721)
HIX0021721
HIT000702602 (
ENST00000590775
)
(Cytohesin-3; ARF nucleotide-binding site opener 3; Protein ARNO3; General receptor of phosphoinositides 1; Grp1; PH, SEC7 and coiled-coil domain-containing protein 3;)
genome : 76,672,201 - 76,719,648 (47,448)
query : 1 - 582 (582/582)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, mito 3, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021721)
HIX0021721
HIT000701606 (
ENST00000589768
)
(Cytohesin-1; PH, SEC7 and coiled-coil domain-containing protein 1; SEC7 homolog B2-1;)
genome : 76,694,351 - 76,732,972 (38,622)
query : 1 - 988 (988/988)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.3333, cyto 14.5, nucl 14,
cyto_mito 8.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021721)
HIX0021721
HIT000697897 (
ENST00000586043
)
(Cytohesin-1; PH, SEC7 and coiled-coil domain-containing protein 1; SEC7 homolog B2-1;)
genome : 76,696,413 - 76,724,047 (27,635)
query : 1 - 836 (836/836)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, extr 7, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021721)
HIX0021721
HIT000699152 (
ENST00000587308
)
(Cytohesin-1; PH, SEC7 and coiled-coil domain-containing protein 1; SEC7 homolog B2-1;)
genome : 76,696,474 - 76,719,646 (23,173)
query : 1 - 553 (553/553)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, cyto_nucl 10.5, nucl 9.5, mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021721)
HIX0021721
HIT000702134 (
ENST00000590300
)
(Cytohesin-1; PH, SEC7 and coiled-coil domain-containing protein 1; SEC7 homolog B2-1;)
genome : 76,697,754 - 76,720,128 (22,375)
query : 1 - 568 (568/568)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11.5, mito 9, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021721)
HIX0021721
HIT000430401
(
AK311535
)
(Cytohesin-1; PH, SEC7 and coiled-coil domain-containing protein 1; SEC7 homolog B2-1;)
genome : 76,704,994 - 76,733,049 (28,056)
query : 1 - 1,097 (1,097/1,097)
2 exons
identity = 0.997
3'(0.996;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 5, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021721)
HIX0021721
HIT000702919 (
ENST00000591095
)
(Cytohesin-1; PH, SEC7 and coiled-coil domain-containing protein 1; SEC7 homolog B2-1;)
genome : 76,704,994 - 76,733,049 (28,056)
query : 1 - 1,097 (1,097/1,097)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021721)
HIX0021721
HIT000704315 (
ENST00000592497
)
(Cytohesin-1; PH, SEC7 and coiled-coil domain-containing protein 1; SEC7 homolog B2-1;)
genome : 76,705,433 - 76,778,355 (72,923)
query : 1 - 454 (454/454)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021721)
HIX0014225
HIT000007202
(
AK023928
)
Representative transcript
(Conserved hypothetical protein.)
genome : 76,753,089 - 76,755,302 (2,214)
query : 1 - 2,214 (2,214/2,214)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 21, mito_pero 3.5, cyto 3, pero 2.5,
cyto_plas 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014225)
HIX0224097
HIT000699971 (
ENST00000588130
)
(Conserved hypothetical protein.)
genome : 76,783,463 - 76,795,804 (12,342)
query : 1 - 602 (602/602)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224097)
HIX0224097
HIT000698855 (
ENST00000587010
)
(Conserved hypothetical protein.)
genome : 76,783,463 - 76,795,072 (11,610)
query : 1 - 607 (607/607)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 15.5, cyto 13.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224097)
HIX0224097
HIT000702876 (
ENST00000591052
)
(Hypothetical short protein.)
genome : 76,783,548 - 76,794,537 (10,990)
query : 1 - 427 (427/427)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224097)
HIX0224097
HIT000699223 (
ENST00000587379
)
(Hypothetical short protein.)
genome : 76,787,945 - 76,794,574 (6,630)
query : 1 - 606 (606/606)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 12, cyto_nucl 8.83333, cyto 3.5,
cyto_pero 2.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224097)
HIX0224097
HIT000026352
(
AL359624
)
(Hypothetical protein.)
genome : 76,791,734 - 76,792,910 (1,177)
query : 1 - 1,177 (1,177/1,245)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224097)
HIX0224097
HIT000704145 (
ENST00000592326
)
(Hypothetical short protein.)
genome : 76,791,734 - 76,793,143 (1,410)
query : 1 - 406 (406/406)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224097)
HIX0224097
HIT000006351
(
AK023077
)
(Conserved hypothetical protein.)
genome : 76,791,735 - 76,795,066 (3,332)
query : 1 - 2,479 (2,479/2,479)
3 exons
identity = 0.997
3'(0.997;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 15.5, nucl 14.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224097)
HIX0224097
HIT000704050 (
ENST00000592231
)
(Conserved hypothetical protein.)
genome : 76,791,735 - 76,795,066 (3,332)
query : 1 - 2,479 (2,479/2,479)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 15.5, nucl 14.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224097)
HIX0224097
HIT000088219
(
BC013890
)
(Conserved hypothetical protein.)
genome : 76,792,968 - 76,798,630 (5,663)
query : 3 - 1,608 (1,606/1,626)
5 exons
identity = 0.991
3'(0.996;1.000;1.000;1.000;0.956)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224097)
HIX0224097
HIT000389497
(
BC127878
)
(Conserved hypothetical protein.)
genome : 76,793,504 - 76,795,045 (1,542)
query : 11 - 675 (665/677)
3 exons
identity = 0.988
3'(0.985;1.000;0.982)5'
coverage = 0.982
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224097)
HIX0224097
pHIT000090694 ( pHIT000090694 )
(Conserved hypothetical protein.)
genome : 76,794,502 - 76,848,586 (54,085)
query : 1 - 2,877 (2,877/2,877)
18 exons
InterPro :
IPR001394 : Peptidase C19, ubiquitin carboxyl-terminal hydrolase
IPR018200 : Ubiquitin specific protease, conserved site
IPR028889 : Ubiquitin specific protease domain
GO :
0006511 : Biological Process : ubiquitin-dependent protein catabolic process
0036459 : Molecular Function : ubiquitinyl hydrolase activity
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224097)
CAGE tag :
H10BA96E0803
HIX0224097
pHIT000090867 ( pHIT000090867 )
(Conserved hypothetical protein.)
genome : 76,794,502 - 76,848,586 (54,085)
query : 1 - 2,805 (2,805/2,805)
18 exons
InterPro :
IPR001394 : Peptidase C19, ubiquitin carboxyl-terminal hydrolase
IPR018200 : Ubiquitin specific protease, conserved site
IPR028889 : Ubiquitin specific protease domain
GO :
0006511 : Biological Process : ubiquitin-dependent protein catabolic process
0036459 : Molecular Function : ubiquitinyl hydrolase activity
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224097)
CAGE tag :
H27BD47G1910
HIX0224097
pHIT000091614 ( pHIT000091614 )
(Conserved hypothetical protein.)
genome : 76,794,502 - 76,848,586 (54,085)
query : 1 - 3,108 (3,108/3,108)
20 exons
InterPro :
IPR001394 : Peptidase C19, ubiquitin carboxyl-terminal hydrolase
IPR018200 : Ubiquitin specific protease, conserved site
IPR028889 : Ubiquitin specific protease domain
GO :
0006511 : Biological Process : ubiquitin-dependent protein catabolic process
0036459 : Molecular Function : ubiquitinyl hydrolase activity
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224097)
CAGE tag :
H04BB13C0403
HIX0224097
HIT000700307 (
ENST00000588467
)
(Peptidase C19, ubiquitin carboxyl-terminal hydrolase domain containing protein.)
genome : 76,803,695 - 76,815,179 (11,485)
query : 1 - 589 (589/589)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224097)
HIX0224097
HIT000702146 (
ENST00000590312
)
(Peptidase C19, ubiquitin carboxyl-terminal hydrolase domain containing protein.)
genome : 76,809,054 - 76,815,025 (5,972)
query : 1 - 549 (549/549)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto_nucl 4, nucl 3.5, cyto 3.5, extr 3,
pero 2, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224097)
HIX0224097
HIT000701093 (
ENST00000589254
)
(Conserved hypothetical protein.)
genome : 76,814,749 - 76,817,442 (2,694)
query : 1 - 565 (565/565)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, extr 12, nucl 12, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224097)
HIX0224097
HIT000052105
(
BC038983
)
Representative transcript
(Peptidase C19, ubiquitin carboxyl-terminal hydrolase domain containing protein.)
genome : 76,822,550 - 76,836,954 (14,405)
query : 1 - 1,777 (1,777/1,850)
6 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.995
InterPro :
IPR001394 : Peptidase C19, ubiquitin carboxyl-terminal hydrolase
IPR018200 : Ubiquitin specific protease, conserved site
IPR028889 : Ubiquitin specific protease domain
GO :
0006511 : Biological Process : ubiquitin-dependent protein catabolic process
0036459 : Molecular Function : ubiquitinyl hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, nucl 8, cyto_pero 8, cyto_plas 8,
cyto_golg 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224097)
HIX0224097
HIT000702376 (
ENST00000590546
)
(Peptidase C19, ubiquitin carboxyl-terminal hydrolase domain containing protein.)
genome : 76,822,555 - 76,836,954 (14,400)
query : 1 - 1,771 (1,771/1,771)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, nucl 8, cyto_pero 8, cyto_plas 8,
cyto_golg 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224097)
HIX0224097
HIT000698377 (
ENST00000586531
)
(Peptidase C19, ubiquitin carboxyl-terminal hydrolase domain containing protein.)
genome : 76,825,028 - 76,836,795 (11,768)
query : 1 - 898 (898/898)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 8, mito 6, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224097)
HIX0224097
HIT000703764 (
ENST00000591942
)
(Peptidase C19, ubiquitin carboxyl-terminal hydrolase domain containing protein.)
genome : 76,831,361 - 76,836,868 (5,508)
query : 1 - 549 (549/549)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, nucl 2, cyto 2, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224097)
HIX0224097
HIT000698741 (
ENST00000586896
)
(Peptidase C19, ubiquitin carboxyl-terminal hydrolase domain containing protein.)
genome : 76,831,361 - 76,834,876 (3,516)
query : 1 - 693 (693/693)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 11.5, extr 5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224097)
HIX0224097
HIT000704725 (
ENST00000592907
)
(Conserved hypothetical protein.)
genome : 76,832,107 - 76,836,848 (4,742)
query : 1 - 543 (543/543)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 11.5, extr 9, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224097)
HIX0224097
HIT000704094 (
ENST00000592275
)
(Conserved hypothetical protein.)
genome : 76,832,206 - 76,837,523 (5,318)
query : 1 - 594 (594/594)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 11, extr 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224097)
HIX0224097
HIT000699625 (
ENST00000587783
)
(Conserved hypothetical protein.)
genome : 76,832,246 - 76,836,729 (4,484)
query : 1 - 679 (679/679)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto_nucl 5.83333, nucl 5, cyto 4.5,
cyto_pero 3.16667, mito_nucl 3.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224097)
HIX0224097
HIT000700205 (
ENST00000588365
)
(Conserved hypothetical protein.)
genome : 76,832,288 - 76,837,307 (5,020)
query : 1 - 546 (546/546)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 12, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224097)
HIX0195481
pHIT000030384 ( pHIT000030384 )
Representative transcript
(Hypothetical protein.)
genome : 76,836,050 - 76,836,971 (922)
query : 1 - 813 (813/813)
2 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0195481)
CAGE tag :
H05BC81F0306
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : XM_001106535
Pan
sp. (Chimpanzee) : XM_001146634
HIX0027219
HIT000044234
(
AK124361
)
Representative transcript
(Conserved hypothetical protein.)
genome : 76,839,282 - 76,841,353 (2,072)
query : 1 - 2,072 (2,072/2,072)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 13, cyto_nucl 10, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027219)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000010151
Pan
sp. (Chimpanzee) : ENSPTRT00000059508
HIX0225112
HIT000703507 (
ENST00000591685
)
(Conserved hypothetical protein.)
genome : 76,842,032 - 76,842,950 (919)
query : 1 - 575 (575/575)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 18, extr 7, cyto 6, cyto_pero 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225112)
HIX0173732
HIT000024463
(
AL110197
)
(Conserved hypothetical protein.)
genome : 76,849,060 - 76,850,870 (1,811)
query : 1 - 1,811 (1,811/1,896)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, nucl 7, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173732)
HIX0173732
HIT000096168
(
BC040445
)
Representative transcript
(Metalloproteinase inhibitor 2; Tissue inhibitor of metalloproteinases 2; TIMP-2; Fragment;)
genome : 76,849,060 - 76,870,168 (21,109)
query : 1 - 3,388 (3,388/3,403)
4 exons
identity = 0.999
3'(1.000;1.000;0.991;0.996)5'
coverage = 1.000
InterPro :
IPR001134 : Netrin domain
IPR001820 : Proteinase inhibitor I35, tissue inhibitor of metalloproteinase
IPR008993 : Tissue inhibitor of metalloproteinases-like, OB-fold
IPR015613 : Tissue inhibitor of metalloprotease 2
IPR027465 : Proteinase inhibitor I35, tissue inhibitor of metalloproteinase, C-terminal domain
GO :
0005515 : Molecular Function : protein binding
0008191 : Molecular Function : metalloendopeptidase inhibitor activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 12, extr 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173732)
HIX0173732
HIT000697278 (
ENST00000585421
)
(Metalloproteinase inhibitor 2; CSC-21K; Tissue inhibitor of metalloproteinases 2; TIMP-2; Precursor;)
genome : 76,849,059 - 76,870,232 (21,174)
query : 1 - 3,345 (3,345/3,345)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, mito 7, extr 5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173732)
HIX0173732
HIT000697911 (
ENST00000586057
)
(Metalloproteinase inhibitor 2; Tissue inhibitor of metalloproteinases 2; TIMP-2; Fragment;)
genome : 76,849,063 - 76,870,171 (21,109)
query : 1 - 3,389 (3,389/3,389)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 12, extr 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173732)
HIX0173732
HIT000087483
(
BC010410
)
(Hypothetical short protein.)
genome : 76,849,318 - 76,850,702 (1,385)
query : 1 - 1,385 (1,385/1,402)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, nucl 7, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173732)
HIX0173732
HIT000386582
(
BC111089
)
(Metalloproteinase inhibitor 2; CSC-21K; Tissue inhibitor of metalloproteinases 2; TIMP-2; Precursor;)
genome : 76,851,562 - 76,851,926 (365)
query : 1 - 364 (364/367)
1 exon
identity = 0.981
3'(0.981)5'
coverage = 0.992
InterPro :
IPR001820 : Proteinase inhibitor I35, tissue inhibitor of metalloproteinase
IPR008993 : Tissue inhibitor of metalloproteinases-like, OB-fold
IPR027465 : Proteinase inhibitor I35, tissue inhibitor of metalloproteinase, C-terminal domain
GO :
0008191 : Molecular Function : metalloendopeptidase inhibitor activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 3.5, mito 3, cyto_nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173732)
HIX0173732
HIT000699278 (
ENST00000587434
)
(Metalloproteinase inhibitor 2; CSC-21K; Tissue inhibitor of metalloproteinases 2; TIMP-2; Precursor;)
genome : 76,851,560 - 76,851,926 (367)
query : 1 - 367 (367/367)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 8, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173732)
HIX0173732
HIT000095846
(
BC039613
)
(Metalloproteinase inhibitor 2; Tissue inhibitor of metalloproteinases 2; TIMP-2; Fragment;)
genome : 76,851,625 - 76,870,171 (18,547)
query : 1 - 827 (827/866)
4 exons
identity = 0.998
3'(1.000;1.000;0.991;0.996)5'
coverage = 1.000
InterPro :
IPR001134 : Netrin domain
IPR001820 : Proteinase inhibitor I35, tissue inhibitor of metalloproteinase
IPR008993 : Tissue inhibitor of metalloproteinases-like, OB-fold
IPR015613 : Tissue inhibitor of metalloprotease 2
IPR027465 : Proteinase inhibitor I35, tissue inhibitor of metalloproteinase, C-terminal domain
GO :
0005515 : Molecular Function : protein binding
0008191 : Molecular Function : metalloendopeptidase inhibitor activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 12, extr 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173732)
HIX0173732
HIT000026687
(
AL713764
)
(Metalloproteinase inhibitor 2; Tissue inhibitor of metalloproteinases 2; TIMP-2; Fragment;)
genome : 76,851,625 - 76,870,218 (18,594)
query : 1 - 2,429 (2,429/2,455)
4 exons
identity = 0.997
3'(0.997;0.997;1.000;0.997)5'
coverage = 1.000
InterPro :
IPR001134 : Netrin domain
IPR001820 : Proteinase inhibitor I35, tissue inhibitor of metalloproteinase
IPR008993 : Tissue inhibitor of metalloproteinases-like, OB-fold
IPR015613 : Tissue inhibitor of metalloprotease 2
IPR027465 : Proteinase inhibitor I35, tissue inhibitor of metalloproteinase, C-terminal domain
GO :
0005515 : Molecular Function : protein binding
0008191 : Molecular Function : metalloendopeptidase inhibitor activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 6, mito 3, cyto_pero 3, cyto_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173732)
HIX0173732
HIT000095973
(
BC040039
)
(Metalloproteinase inhibitor 2; Tissue inhibitor of metalloproteinases 2; TIMP-2; Precursor;)
genome : 76,851,619 - 76,870,083 (18,465)
query : 1 - 745 (745/759)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001134 : Netrin domain
IPR001820 : Proteinase inhibitor I35, tissue inhibitor of metalloproteinase
IPR008993 : Tissue inhibitor of metalloproteinases-like, OB-fold
IPR015613 : Tissue inhibitor of metalloprotease 2
IPR027465 : Proteinase inhibitor I35, tissue inhibitor of metalloproteinase, C-terminal domain
GO :
0005515 : Molecular Function : protein binding
0008191 : Molecular Function : metalloendopeptidase inhibitor activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 12, extr 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173732)
HIX0173732
HIT000704579 (
ENST00000592761
)
(Metalloproteinase inhibitor 2; Tissue inhibitor of metalloproteinases 2; TIMP-2; Fragment;)
genome : 76,851,624 - 76,870,218 (18,595)
query : 1 - 2,433 (2,433/2,433)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 6, mito 3, cyto_pero 3, cyto_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173732)
HIX0224126
HIT000722962 (
NM_001243540
)
(Conserved hypothetical protein.)
genome : 76,886,662 - 76,899,299 (12,638)
query : 1 - 2,106 (2,106/2,106)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 16.5, cyto 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224126)
HIX0224126
HIT000722963 (
NM_001243541
)
(Conserved hypothetical protein.)
genome : 76,886,662 - 76,899,299 (12,638)
query : 1 - 2,167 (2,167/2,167)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto_nucl 17, cyto 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224126)
HIX0224126
HIT000013831
(
AK057217
)
Representative transcript
(Conserved hypothetical protein.)
genome : 76,886,662 - 76,899,283 (12,622)
query : 1 - 2,090 (2,090/2,090)
3 exons
identity = 1.000
3'(1.000;0.993;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 16.5, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224126)
HIX0224126
HIT000123219 (
ENST00000322630
)
(Conserved hypothetical protein.)
genome : 76,886,662 - 76,899,283 (12,622)
query : 1 - 2,090 (2,090/2,090)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 16.5, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224126)
HIX0224126
HIT000702101 (
ENST00000590267
)
(Hypothetical protein.)
genome : 76,888,247 - 76,899,299 (11,053)
query : 1 - 582 (582/582)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 10, extr 9, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224126)
HIX0224126
HIT000698897 (
ENST00000587052
)
(Hypothetical protein.)
genome : 76,888,351 - 76,899,281 (10,931)
query : 1 - 564 (564/564)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 8, cyto_nucl 8, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224126)
HIX0018074
HIT000022699
(
AK097845
)
Representative transcript
(Conserved hypothetical protein.)
genome : 76,893,346 - 76,896,234 (2,889)
query : 1 - 2,889 (2,889/2,889)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto 8.5, cyto_pero 6.5, extr 6, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018074)
HIX0225103
HIT000702932 (
ENST00000591108
)
(Conserved hypothetical protein.)
genome : 76,899,345 - 76,901,106 (1,762)
query : 1 - 945 (945/945)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 10, mito 9, cyto 5.5, extr 5,
mito_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225103)
HIX0027214
HIT000043798
(
AK123925
)
Representative transcript
(Hypothetical protein.)
genome : 76,930,670 - 76,932,502 (1,833)
query : 1 - 1,833 (1,833/1,834)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 14, cyto 7, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027214)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000010153
HIX0014231
HIT000037304
(
BC015761
)
(Galectin-3-binding protein; Basement membrane autoantigen p105; Lectin galactoside-binding soluble 3-binding protein; Mac-2-binding protein; MAC2BP; Mac-2 BP; Tumor-associated antigen 90K; Precursor;)
genome : 76,967,335 - 76,976,026 (8,692)
query : 1 - 2,225 (2,225/2,263)
6 exons
identity = 1.000
3'(1.000;1.000;0.992;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000210 : BTB/POZ-like
IPR001190 : SRCR domain
IPR011333 : BTB/POZ fold
IPR011705 : BTB/Kelch-associated
IPR017448 : SRCR-like domain
GO :
0005044 : Molecular Function : scavenger receptor activity
0005515 : Molecular Function : protein binding
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, lyso 4, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014231)
HIX0014231
HIT000030866
(
BC002403
)
(Galectin-3-binding protein; Basement membrane autoantigen p105; Lectin galactoside-binding soluble 3-binding protein; Mac-2-binding protein; MAC2BP; Mac-2 BP; Tumor-associated antigen 90K; Precursor;)
genome : 76,967,337 - 76,975,994 (8,658)
query : 1 - 2,191 (2,191/2,212)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000210 : BTB/POZ-like
IPR001190 : SRCR domain
IPR011333 : BTB/POZ fold
IPR011705 : BTB/Kelch-associated
IPR017448 : SRCR-like domain
GO :
0005044 : Molecular Function : scavenger receptor activity
0005515 : Molecular Function : protein binding
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, lyso 4, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014231)
HIX0014231
HIT000031346
(
BC002998
)
(Galectin-3-binding protein; Basement membrane autoantigen p105; Lectin galactoside-binding soluble 3-binding protein; Mac-2-binding protein; MAC2BP; Mac-2 BP; Tumor-associated antigen 90K; Precursor;)
genome : 76,967,337 - 76,975,994 (8,658)
query : 1 - 2,191 (2,191/2,212)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000210 : BTB/POZ-like
IPR001190 : SRCR domain
IPR011333 : BTB/POZ fold
IPR011705 : BTB/Kelch-associated
IPR017448 : SRCR-like domain
GO :
0005044 : Molecular Function : scavenger receptor activity
0005515 : Molecular Function : protein binding
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, lyso 4, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014231)
HIX0014231
HIT000202250 (
NM_005567
)
(Galectin-3-binding protein; Basement membrane autoantigen p105; Lectin galactoside-binding soluble 3-binding protein; Mac-2-binding protein; MAC2BP; Mac-2 BP; Tumor-associated antigen 90K; Precursor;)
genome : 76,967,335 - 76,976,061 (8,727)
query : 1 - 2,260 (2,260/2,277)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, lyso 4, nucl 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014231)
HIX0014231
HIT000108571 (
ENST00000262776
)
(Galectin-3-binding protein; Basement membrane autoantigen p105; Lectin galactoside-binding soluble 3-binding protein; Mac-2-binding protein; MAC2BP; Mac-2 BP; Tumor-associated antigen 90K; Precursor;)
genome : 76,967,320 - 76,976,191 (8,872)
query : 1 - 2,405 (2,405/2,405)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, lyso 4, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014231)
HIX0014231
HIT000703600 (
ENST00000591778
)
(Galectin-3-binding protein; Basement membrane autoantigen p105; Lectin galactoside-binding soluble 3-binding protein; Mac-2-binding protein; MAC2BP; Mac-2 BP; Tumor-associated antigen 90K; Precursor;)
genome : 76,967,320 - 76,976,000 (8,681)
query : 1 - 1,961 (1,961/1,961)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014231)
HIX0014231
HIT000012591
(
AK055977
)
(Galectin-3-binding protein; Cyp-C-associated protein; CyCAP; Lectin galactoside-binding soluble 3-binding protein; Protein MAMA; Precursor;)
genome : 76,967,336 - 76,976,036 (8,701)
query : 1 - 1,922 (1,922/1,922)
5 exons
identity = 0.997
3'(0.999;0.983;0.978;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000210 : BTB/POZ-like
IPR011333 : BTB/POZ fold
IPR011705 : BTB/Kelch-associated
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 8, mito 6, cyto_pero 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014231)
HIX0014231
HIT000323702
(
X79089
)
(Galectin-3-binding protein; Basement membrane autoantigen p105; Lectin galactoside-binding soluble 3-binding protein; Mac-2-binding protein; MAC2BP; Mac-2 BP; Tumor-associated antigen 90K; Precursor;)
genome : 76,967,337 - 76,976,013 (8,677)
query : 1 - 2,206 (2,206/2,206)
6 exons
identity = 0.997
3'(0.997;1.000;0.992;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000210 : BTB/POZ-like
IPR001190 : SRCR domain
IPR011333 : BTB/POZ fold
IPR011705 : BTB/Kelch-associated
IPR017448 : SRCR-like domain
GO :
0005044 : Molecular Function : scavenger receptor activity
0005515 : Molecular Function : protein binding
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, lyso 4, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014231)
HIX0014231
HIT000192184
(
L13210
)
Representative transcript
(Galectin-3-binding protein; Basement membrane autoantigen p105; Lectin galactoside-binding soluble 3-binding protein; Mac-2-binding protein; MAC2BP; Mac-2 BP; Tumor-associated antigen 90K; Precursor;)
genome : 76,967,338 - 76,976,061 (8,724)
query : 1 - 2,257 (2,257/2,257)
6 exons
identity = 0.999
3'(1.000;1.000;0.992;0.995;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000210 : BTB/POZ-like
IPR001190 : SRCR domain
IPR011333 : BTB/POZ fold
IPR011705 : BTB/Kelch-associated
IPR017448 : SRCR-like domain
GO :
0005044 : Molecular Function : scavenger receptor activity
0005515 : Molecular Function : protein binding
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, lyso 4, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014231)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AF065438
Mus
sp. (Mouse) : AK079915
Danio
sp. (Zebrafish) : BC114268
Bos
sp. (Cow) : BT030733
Oryzias
sp. (Medaka) : ENSORLT00000009728
Pongo
sp. (Orangutan) : ENSPPYT00000010154
Tetraodon
sp. (Tetraodon) : GSTENT00018575001
Takifugu
sp. (Fugu) : SINFRUT00000143369
Takifugu
sp. (Fugu) : SINFRUT00000180416
Macaca
sp. (Macaque) : XM_001109047
Pan
sp. (Chimpanzee) : XM_001158273
Equus
sp. (Horse) : XM_001490950
Canis
sp. (Dog) : XM_540464
HIX0014231
HIT000487807
(
AK293183
)
(Galectin-3-binding protein; Basement membrane autoantigen p105; Lectin galactoside-binding soluble 3-binding protein; Mac-2-binding protein; MAC2BP; Mac-2 BP; Tumor-associated antigen 90K; Precursor;)
genome : 76,967,338 - 76,976,033 (8,696)
query : 3 - 1,931 (1,929/1,931)
5 exons
identity = 0.996
3'(0.999;1.000;0.952;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR001190 : SRCR domain
IPR011705 : BTB/Kelch-associated
IPR017448 : SRCR-like domain
GO :
0005044 : Molecular Function : scavenger receptor activity
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014231)
HIX0014231
HIT000014383
(
AK057776
)
(BTB/Kelch-associated domain containing protein.)
genome : 76,967,338 - 76,976,021 (8,684)
query : 1 - 1,888 (1,888/1,888)
5 exons
identity = 0.999
3'(0.999;1.000;0.989;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR011705 : BTB/Kelch-associated
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, nucl 6, cyto_pero 3, extr 2, cyto 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014231)
HIX0014231
HIT000496068
(
AK301444
)
(Galectin-3-binding protein; Basement membrane autoantigen p105; Lectin galactoside-binding soluble 3-binding protein; Mac-2-binding protein; MAC2BP; Mac-2 BP; Tumor-associated antigen 90K; Precursor;)
genome : 76,967,338 - 76,976,005 (8,668)
query : 1 - 1,905 (1,905/1,905)
5 exons
identity = 0.997
3'(0.999;1.000;0.937;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000210 : BTB/POZ-like
IPR011333 : BTB/POZ fold
IPR011705 : BTB/Kelch-associated
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 11.6667, cyto 9.5,
cyto_pero 6.33333, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014231)
HIX0014231
HIT000699155 (
ENST00000587311
)
(Galectin-3-binding protein; Basement membrane autoantigen p105; Lectin galactoside-binding soluble 3-binding protein; Mac-2-binding protein; MAC2BP; Mac-2 BP; Tumor-associated antigen 90K; Precursor;)
genome : 76,967,338 - 76,976,005 (8,668)
query : 1 - 1,905 (1,905/1,905)
5 exons
identity = 0.998
3'(1.000;1.000;0.949;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 11.6667, cyto 9.5,
cyto_pero 6.33333, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014231)
HIX0014231
HIT000426531
(
AK307665
)
(Galectin-3-binding protein; Basement membrane autoantigen p105; Lectin galactoside-binding soluble 3-binding protein; Mac-2-binding protein; MAC2BP; Mac-2 BP; Tumor-associated antigen 90K; Precursor;)
genome : 76,967,338 - 76,975,982 (8,645)
query : 1 - 1,980 (1,980/1,980)
7 exons
identity = 0.985
3'(0.956;0.980;1.000;0.992;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000210 : BTB/POZ-like
IPR001190 : SRCR domain
IPR011333 : BTB/POZ fold
IPR011705 : BTB/Kelch-associated
IPR017448 : SRCR-like domain
GO :
0005044 : Molecular Function : scavenger receptor activity
0005515 : Molecular Function : protein binding
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 3, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014231)
HIX0014231
HIT000698566 (
ENST00000586720
)
(Galectin-3-binding protein; Basement membrane autoantigen p105; Lectin galactoside-binding soluble 3-binding protein; Mac-2-binding protein; MAC2BP; Mac-2 BP; Tumor-associated antigen 90K; Precursor;)
genome : 76,967,367 - 76,975,990 (8,624)
query : 1 - 1,736 (1,736/1,736)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 14, cyto 7.5, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014231)
HIX0014231
HIT000495664
(
AK301040
)
(Galectin-3-binding protein; Basement membrane autoantigen p105; Lectin galactoside-binding soluble 3-binding protein; Mac-2-binding protein; MAC2BP; Mac-2 BP; Tumor-associated antigen 90K; Precursor;)
genome : 76,967,413 - 76,976,005 (8,593)
query : 1 - 2,090 (2,090/2,090)
6 exons
identity = 0.995
3'(1.000;1.000;0.955;0.966;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000210 : BTB/POZ-like
IPR001190 : SRCR domain
IPR011333 : BTB/POZ fold
IPR011705 : BTB/Kelch-associated
IPR017448 : SRCR-like domain
GO :
0005044 : Molecular Function : scavenger receptor activity
0005515 : Molecular Function : protein binding
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, lyso 4, nucl 2.5, cyto_nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014231)
HIX0014231
HIT000699095 (
ENST00000587251
)
(Galectin-3-binding protein; Basement membrane autoantigen p105; Lectin galactoside-binding soluble 3-binding protein; Mac-2-binding protein; MAC2BP; Mac-2 BP; Tumor-associated antigen 90K; Precursor;)
genome : 76,967,413 - 76,976,005 (8,593)
query : 1 - 2,091 (2,091/2,091)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014231)
HIX0014231
HIT000490066
(
AK295442
)
(Galectin-3-binding protein; Basement membrane autoantigen p105; Lectin galactoside-binding soluble 3-binding protein; Mac-2-binding protein; MAC2BP; Mac-2 BP; Tumor-associated antigen 90K; Precursor;)
genome : 76,967,477 - 76,976,005 (8,529)
query : 1 - 1,546 (1,546/1,546)
4 exons
identity = 0.995
3'(0.999;0.966;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001190 : SRCR domain
IPR011705 : BTB/Kelch-associated
IPR017448 : SRCR-like domain
GO :
0005044 : Molecular Function : scavenger receptor activity
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 3, cyto_nucl 2, nucl 1.5, cyto 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014231)
HIX0014231
HIT000700348 (
ENST00000588508
)
(Galectin-3-binding protein; Basement membrane autoantigen p105; Lectin galactoside-binding soluble 3-binding protein; Mac-2-binding protein; MAC2BP; Mac-2 BP; Tumor-associated antigen 90K; Precursor;)
genome : 76,968,468 - 76,971,079 (2,612)
query : 1 - 882 (882/882)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, cyto 13, nucl 9, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014231)
HIX0014231
HIT000700038 (
ENST00000588198
)
(Galectin-3-binding protein; Basement membrane autoantigen p105; Lectin galactoside-binding soluble 3-binding protein; Mac-2-binding protein; MAC2BP; Mac-2 BP; Tumor-associated antigen 90K; Precursor;)
genome : 76,968,552 - 76,976,029 (7,478)
query : 1 - 1,132 (1,132/1,132)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014231)
HIX0014231
HIT000701365 (
ENST00000589527
)
(Galectin-3-binding protein; Basement membrane autoantigen p105; Lectin galactoside-binding soluble 3-binding protein; Mac-2-binding protein; MAC2BP; Mac-2 BP; Tumor-associated antigen 90K; Precursor;)
genome : 76,968,639 - 76,973,299 (4,661)
query : 16 - 818 (803/818)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.982
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014231)
HIX0014231
HIT000700427 (
ENST00000588587
)
(Galectin-3-binding protein; Basement membrane autoantigen p105; Lectin galactoside-binding soluble 3-binding protein; Mac-2-binding protein; MAC2BP; Mac-2 BP; Tumor-associated antigen 90K; Precursor;)
genome : 76,968,730 - 76,972,238 (3,509)
query : 1 - 1,020 (1,020/1,020)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014231)
HIX0014231
HIT000704074 (
ENST00000592255
)
(Galectin-3-binding protein; Basement membrane autoantigen p105; Lectin galactoside-binding soluble 3-binding protein; Mac-2-binding protein; MAC2BP; Mac-2 BP; Tumor-associated antigen 90K; Precursor;)
genome : 76,968,851 - 76,970,878 (2,028)
query : 1 - 556 (556/556)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 9, cyto_nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014231)
HIX0014231
HIT000697265 (
ENST00000585407
)
(Galectin-3-binding protein; Basement membrane autoantigen p105; Lectin galactoside-binding soluble 3-binding protein; Mac-2-binding protein; MAC2BP; Mac-2 BP; Tumor-associated antigen 90K; Precursor;)
genome : 76,968,880 - 76,976,017 (7,138)
query : 1 - 936 (936/936)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014231)
HIX0014231
HIT000701613 (
ENST00000589775
)
(Galectin-3-binding protein; Basement membrane autoantigen p105; Lectin galactoside-binding soluble 3-binding protein; Mac-2-binding protein; MAC2BP; Mac-2 BP; Tumor-associated antigen 90K; Precursor;)
genome : 76,969,050 - 76,976,005 (6,956)
query : 1 - 895 (895/895)
6 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;0.972;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014231)
HIX0014231
HIT000701744 (
ENST00000589906
)
(Galectin-3-binding protein; Basement membrane autoantigen p105; Lectin galactoside-binding soluble 3-binding protein; Mac-2-binding protein; MAC2BP; Mac-2 BP; Tumor-associated antigen 90K; Precursor;)
genome : 76,969,057 - 76,975,990 (6,934)
query : 1 - 540 (540/540)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014231)
HIX0014231
HIT000699154 (
ENST00000587310
)
(Galectin-3-binding protein; Cyp-C-associated protein; CyCAP; Lectin galactoside-binding soluble 3-binding protein; Protein MAMA; Precursor;)
genome : 76,969,082 - 76,975,993 (6,912)
query : 1 - 768 (768/768)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 9, cyto_nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014231)
HIX0014231
HIT000700045 (
ENST00000588205
)
(Galectin-3-binding protein; Basement membrane autoantigen p105; Lectin galactoside-binding soluble 3-binding protein; Mac-2-binding protein; MAC2BP; Mac-2 BP; Tumor-associated antigen 90K; Precursor;)
genome : 76,969,270 - 76,973,298 (4,029)
query : 1 - 581 (581/581)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 4, cyto_nucl 4, nucl 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014231)
HIX0014231
HIT000700830 (
ENST00000588990
)
(Galectin-3-binding protein; Cyp-C-associated protein; CyCAP; Lectin galactoside-binding soluble 3-binding protein; Protein MAMA; Precursor;)
genome : 76,970,713 - 76,976,009 (5,297)
query : 1 - 618 (618/618)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 2, cyto 2, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014231)
HIX0014231
HIT000700739 (
ENST00000588899
)
(Galectin-3-binding protein; Basement membrane autoantigen p105; Lectin galactoside-binding soluble 3-binding protein; Mac-2-binding protein; MAC2BP; Mac-2 BP; Tumor-associated antigen 90K; Precursor;)
genome : 76,970,714 - 76,975,973 (5,260)
query : 1 - 668 (668/668)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 4, cyto_nucl 4, nucl 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014231)
HIX0014231
HIT000703097 (
ENST00000591274
)
(Galectin-3-binding protein; Basement membrane autoantigen p105; Lectin galactoside-binding soluble 3-binding protein; Mac-2-binding protein; MAC2BP; Mac-2 BP; Tumor-associated antigen 90K; Precursor;)
genome : 76,972,039 - 76,973,560 (1,522)
query : 16 - 366 (351/379)
3 exons
identity = 0.991
3'(0.985;1.000;1.000)5'
coverage = 0.926
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014231)
HIX0014231
HIT000698150 (
ENST00000586300
)
(Galectin-3-binding protein; Basement membrane autoantigen p105; Lectin galactoside-binding soluble 3-binding protein; Mac-2-binding protein; MAC2BP; Mac-2 BP; Tumor-associated antigen 90K; Precursor;)
genome : 76,972,907 - 76,975,957 (3,051)
query : 1 - 442 (442/442)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 4, cyto_nucl 4, nucl 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014231)
HIX0014230
HIT000086462
(
BC005104
)
(Conserved hypothetical protein.)
genome : 76,987,798 - 76,989,771 (1,974)
query : 1 - 1,975 (1,975/2,002)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 7.5, cyto_nucl 6, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014230)
HIX0014230
HIT000009435
(
AK026161
)
(Conserved hypothetical protein.)
genome : 76,987,798 - 76,989,352 (1,555)
query : 1 - 1,555 (1,555/1,576)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 7.5, cyto_nucl 6, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014230)
HIX0014230
HIT000038069
(
BC017655
)
(Soluble calcium-activated nucleotidase 1; SCAN-1; EC=3.6.1.6; Apyrase homolog; Putative MAPK-activating protein PM09; Putative NF-kappa-B-activating protein 107;)
genome : 76,987,798 - 77,005,812 (18,015)
query : 1 - 3,253 (3,253/3,270)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
InterPro :
IPR009283 : Apyrase
GO :
0005509 : Molecular Function : calcium ion binding
0016462 : Molecular Function : pyrophosphatase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 9, mito 7, extr_plas 7, plas 5, cyto 4, E.R. 4,
mito_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014230)
HIX0014230
HIT000261740
(
BC065038
)
(Soluble calcium-activated nucleotidase 1; SCAN-1; EC=3.6.1.6; Apyrase homolog; Putative MAPK-activating protein PM09; Putative NF-kappa-B-activating protein 107;)
genome : 76,987,798 - 76,994,015 (6,218)
query : 1 - 3,156 (3,156/3,170)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
InterPro :
IPR009283 : Apyrase
GO :
0005509 : Molecular Function : calcium ion binding
0016462 : Molecular Function : pyrophosphatase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 9, mito 7, extr_plas 7, plas 5, cyto 4, E.R. 4,
mito_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014230)
HIX0014230
HIT000212552 (
NM_138793
)
(Soluble calcium-activated nucleotidase 1; SCAN-1; EC=3.6.1.6; Apyrase homolog; Putative MAPK-activating protein PM09; Putative NF-kappa-B-activating protein 107;)
genome : 76,987,798 - 77,005,899 (18,102)
query : 1 - 3,535 (3,535/3,545)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 9, mito 7, extr_plas 7, plas 5, cyto 4, E.R. 4,
mito_pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014230)
HIX0014230
HIT000561807 (
NM_001159772
)
(Soluble calcium-activated nucleotidase 1; SCAN-1; EC=3.6.1.6; Apyrase homolog; Putative MAPK-activating protein PM09; Putative NF-kappa-B-activating protein 107;)
genome : 76,987,798 - 77,005,899 (18,102)
query : 1 - 3,479 (3,479/3,489)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 9, mito 7, extr_plas 7, plas 5, cyto 4, E.R. 4,
mito_pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014230)
HIX0014230
HIT000561808 (
NM_001159773
)
(Soluble calcium-activated nucleotidase 1; SCAN-1; EC=3.6.1.6; Apyrase homolog; Putative MAPK-activating protein PM09; Putative NF-kappa-B-activating protein 107;)
genome : 76,987,798 - 77,005,899 (18,102)
query : 1 - 3,340 (3,340/3,350)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 9, mito 7, extr_plas 7, plas 5, cyto 4, E.R. 4,
mito_pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014230)
HIX0014230
HIT000116132 (
ENST00000302345
)
(Soluble calcium-activated nucleotidase 1; SCAN-1; EC=3.6.1.6; Apyrase homolog; Putative MAPK-activating protein PM09; Putative NF-kappa-B-activating protein 107;)
genome : 76,987,799 - 77,005,899 (18,101)
query : 1 - 3,534 (3,534/3,534)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 9, mito 7, extr_plas 7, plas 5, cyto 4, E.R. 4,
mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014230)
HIX0014230
HIT000081722
(
AK074687
)
(Soluble calcium-activated nucleotidase 1; SCAN-1; EC=3.6.1.6; Apyrase homolog; Putative MAPK-activating protein PM09; Putative NF-kappa-B-activating protein 107;)
genome : 76,987,799 - 77,005,838 (18,040)
query : 1 - 3,473 (3,473/3,473)
4 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
InterPro :
IPR009283 : Apyrase
GO :
0005509 : Molecular Function : calcium ion binding
0016462 : Molecular Function : pyrophosphatase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 9, mito 7, extr_plas 7, plas 5, cyto 4, E.R. 4,
mito_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014230)
HIX0014230
HIT000475929 (
ENST00000392446
)
(Soluble calcium-activated nucleotidase 1; SCAN-1; EC=3.6.1.6; Apyrase homolog; Putative MAPK-activating protein PM09; Putative NF-kappa-B-activating protein 107;)
genome : 76,987,799 - 77,005,812 (18,014)
query : 1 - 3,252 (3,252/3,252)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 9, mito 7, extr_plas 7, plas 5, cyto 4, E.R. 4,
mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014230)
HIX0014230
HIT000242143
(
AB097006
)
(Soluble calcium-activated nucleotidase 1; SCAN-1; EC=3.6.1.6; Apyrase homolog; Putative MAPK-activating protein PM09; Putative NF-kappa-B-activating protein 107;)
genome : 76,987,802 - 77,005,849 (18,048)
query : 1 - 1,551 (1,551/1,551)
5 exons
identity = 0.999
3'(1.000;1.000;0.958;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
InterPro :
IPR009283 : Apyrase
GO :
0005509 : Molecular Function : calcium ion binding
0016462 : Molecular Function : pyrophosphatase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10, mito 8, cyto 4, pero 3, cyto_plas 3, plas 2,
E.R. 2, lyso 2, cyto_golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014230)
HIX0014230
HIT000242170
(
AB097033
)
(Soluble calcium-activated nucleotidase 1; SCAN-1; EC=3.6.1.6; Apyrase homolog; Putative MAPK-activating protein PM09; Putative NF-kappa-B-activating protein 107;)
genome : 76,987,802 - 77,005,849 (18,048)
query : 1 - 1,551 (1,551/1,551)
5 exons
identity = 0.999
3'(1.000;1.000;0.958;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
InterPro :
IPR009283 : Apyrase
GO :
0005509 : Molecular Function : calcium ion binding
0016462 : Molecular Function : pyrophosphatase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10, mito 8, cyto 4, pero 3, cyto_plas 3, plas 2,
E.R. 2, lyso 2, cyto_golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014230)
HIX0014230
HIT000704047 (
ENST00000592228
)
(Soluble calcium-activated nucleotidase 1; SCAN-1; EC=3.6.1.6; Apyrase homolog; Putative MAPK-activating protein PM09; Putative NF-kappa-B-activating protein 107;)
genome : 76,987,802 - 77,005,849 (18,048)
query : 1 - 1,546 (1,546/1,546)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, mito 5, plas 4, cyto 4, cyto_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014230)
HIX0014230
HIT000247107
(
AJ312208
)
(Soluble calcium-activated nucleotidase 1; SCAN-1; EC=3.6.1.6; Apyrase homolog; Putative MAPK-activating protein PM09; Putative NF-kappa-B-activating protein 107;)
genome : 76,987,933 - 76,993,284 (5,352)
query : 1 - 2,484 (2,484/2,484)
3 exons
identity = 0.999
3'(0.999;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
InterPro :
IPR009283 : Apyrase
GO :
0005509 : Molecular Function : calcium ion binding
0016462 : Molecular Function : pyrophosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014230)
HIX0014230
HIT000464229
(
DQ597698
)
(Non-protein coding transcript.)
genome : 76,988,707 - 76,988,736 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014230)
HIX0014230
HIT000439429
(
DQ572898
)
(Non-protein coding transcript.)
genome : 76,988,855 - 76,988,884 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014230)
HIX0014230
HIT000452508
(
DQ585977
)
(Non-protein coding transcript.)
genome : 76,989,401 - 76,989,431 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014230)
HIX0014230
HIT000445421
(
DQ578890
)
(Non-protein coding transcript.)
genome : 76,989,415 - 76,989,445 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014230)
HIX0014230
HIT000077566
(
AF328554
)
Representative transcript
(Soluble calcium-activated nucleotidase 1; SCAN-1; EC=3.6.1.6; Apyrase homolog; Putative MAPK-activating protein PM09; Putative NF-kappa-B-activating protein 107;)
genome : 76,989,568 - 77,005,853 (16,286)
query : 9 - 1,671 (1,663/1,691)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.1.5
,
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
InterPro :
IPR009283 : Apyrase
GO :
0005509 : Molecular Function : calcium ion binding
0016462 : Molecular Function : pyrophosphatase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 9, mito 7, extr_plas 7, plas 5, cyto 4, E.R. 4,
mito_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014230)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK006565
Danio
sp. (Zebrafish) : BC068371
Rattus
sp. (Rat) : BC097279
Gallus
sp. (Chicken) : ENSGALT00000019296
Oryzias
sp. (Medaka) : ENSORLT00000009743
Oryzias
sp. (Medaka) : ENSORLT00000015420
Pongo
sp. (Orangutan) : ENSPPYT00000010155
Tetraodon
sp. (Tetraodon) : GSTENT00018574001
Takifugu
sp. (Fugu) : SINFRUT00000143361
Macaca
sp. (Macaque) : XM_001109158
Pan
sp. (Chimpanzee) : XM_001158690
Monodelphis
sp. (Opossum) : XM_001371041
Equus
sp. (Horse) : XM_001490865
Bos
sp. (Cow) : XM_596269
Canis
sp. (Dog) : XM_843633
HIX0014230
HIT000703595 (
ENST00000591773
)
(Soluble calcium-activated nucleotidase 1; SCAN-1; EC=3.6.1.6; Apyrase homolog; Putative MAPK-activating protein PM09; Putative NF-kappa-B-activating protein 107;)
genome : 76,989,569 - 77,005,860 (16,292)
query : 1 - 1,669 (1,669/1,669)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 9, mito 7, extr_plas 7, plas 5, cyto 4, E.R. 4,
mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014230)
HIX0014230
HIT000490554
(
AK295930
)
(Soluble calcium-activated nucleotidase 1; SCAN-1; EC=3.6.1.6; Apyrase homolog; Putative MAPK-activating protein PM09; Putative NF-kappa-B-activating protein 107;)
genome : 76,989,577 - 77,005,875 (16,299)
query : 1 - 1,384 (1,384/1,384)
6 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.992)5'
coverage = 1.000
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
InterPro :
IPR009283 : Apyrase
GO :
0005509 : Molecular Function : calcium ion binding
0016462 : Molecular Function : pyrophosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 15, nucl 9, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014230)
HIX0014230
HIT000387849
(
BC118563
)
(Soluble calcium-activated nucleotidase 1; SCAN-1; EC=3.6.1.6; Apyrase homolog; Putative MAPK-activating protein PM09; Putative NF-kappa-B-activating protein 107;)
genome : 76,989,866 - 76,991,331 (1,466)
query : 9 - 377 (369/378)
2 exons
identity = 0.995
3'(0.985;1.000)5'
coverage = 0.976
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
InterPro :
IPR009283 : Apyrase
GO :
0005509 : Molecular Function : calcium ion binding
0016462 : Molecular Function : pyrophosphatase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 13.5, extr 5, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014230)
HIX0014230
HIT000699937 (
ENST00000588096
)
(Soluble calcium-activated nucleotidase 1; SCAN-1; EC=3.6.1.6; Apyrase homolog; Putative MAPK-activating protein PM09; Putative NF-kappa-B-activating protein 107;)
genome : 76,989,866 - 76,991,331 (1,466)
query : 1 - 369 (369/369)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 13.5, extr 6, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014230)
HIX0014230
HIT000449458
(
DQ582927
)
(Non-protein coding transcript.)
genome : 76,991,191 - 76,991,221 (31)
query : 1 - 31 (31/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.969
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014230)
HIX0136382
HIT000461385
(
DQ594854
)
Representative transcript
(Non-protein coding transcript.)
genome : 76,992,745 - 76,992,775 (31)
query : 1 - 31 (31/32)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.969
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0136382)
HIX0014230
HIT000700451 (
ENST00000588611
)
(Soluble calcium-activated nucleotidase 1; SCAN-1; EC=3.6.1.6; Apyrase homolog; Putative MAPK-activating protein PM09; Putative NF-kappa-B-activating protein 107;)
genome : 76,993,188 - 77,005,862 (12,675)
query : 1 - 900 (900/900)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 11.5, mito 10, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014230)
HIX0014230
HIT000699916 (
ENST00000588075
)
(Soluble calcium-activated nucleotidase 1; SCAN-1; EC=3.6.1.6; Apyrase homolog; Putative MAPK-activating protein PM09; Putative NF-kappa-B-activating protein 107;)
genome : 76,993,475 - 77,005,884 (12,410)
query : 1 - 881 (881/881)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 16, mito 8, plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014230)
HIX0014230
HIT000702201 (
ENST00000590370
)
(Soluble calcium-activated nucleotidase 1; SCAN-1; EC=3.6.1.6; Apyrase homolog; Putative MAPK-activating protein PM09; Putative NF-kappa-B-activating protein 107;)
genome : 76,993,509 - 77,005,846 (12,338)
query : 1 - 614 (614/614)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 11, extr 11, extr_plas 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014230)
HIX0014230
HIT000698761 (
ENST00000586916
)
(Soluble calcium-activated nucleotidase 1; SCAN-1; EC=3.6.1.6; Apyrase homolog; Putative MAPK-activating protein PM09; Putative NF-kappa-B-activating protein 107;)
genome : 76,993,522 - 77,005,837 (12,316)
query : 1 - 731 (731/731)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.1.6
KEGG pathway :
00230 : Purine metabolism (100)
00240 : Pyrimidine metabolism (63)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 13, extr 10, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014230)
HIX0014230
HIT000453163
(
DQ586632
)
(Non-protein coding transcript.)
genome : 76,993,549 - 76,993,578 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014230)
HIX0014230
HIT000703633 (
ENST00000591811
)
(Conserved hypothetical protein.)
genome : 76,993,589 - 77,005,949 (12,361)
query : 1 - 466 (466/466)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 9, extr_plas 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014230)
HIX0014230
HIT000703854 (
ENST00000592033
)
(Conserved hypothetical protein.)
genome : 76,993,589 - 77,005,875 (12,287)
query : 1 - 502 (502/502)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 9, extr_plas 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014230)
HIX0014230
HIT000703447 (
ENST00000591625
)
(Hypothetical short protein.)
genome : 76,993,659 - 77,005,847 (12,189)
query : 1 - 599 (599/599)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 9, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014230)
HIX0014230
HIT000704705 (
ENST00000592887
)
(Hypothetical short protein.)
genome : 76,993,748 - 77,002,295 (8,548)
query : 1 - 555 (555/555)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 9, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014230)
HIX0014230
HIT000698947 (
ENST00000587102
)
(Hypothetical short protein.)
genome : 76,993,920 - 77,005,875 (11,956)
query : 1 - 566 (566/566)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 5, cyto 5, cyto_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014230)
HIX0014230
HIT000461721
(
DQ595190
)
(Non-protein coding transcript.)
genome : 76,993,927 - 76,993,957 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014230)
HIX0014230
HIT000452697
(
DQ586166
)
(Non-protein coding transcript.)
genome : 76,993,927 - 76,993,956 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014230)
HIX0014230
HIT000699086 (
ENST00000587242
)
(Non-protein coding transcript.)
genome : 76,994,230 - 77,005,875 (11,646)
query : 1 - 550 (550/550)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014230)
HIX0014230
HIT000703554 (
ENST00000591732
)
(Non-protein coding transcript.)
genome : 76,994,311 - 77,005,875 (11,565)
query : 1 - 578 (578/578)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014230)
HIX0039450
HIT000095872
(
BC039683
)
Representative transcript
(Domain of unknown function DUF4462 domain containing protein.)
genome : 77,015,298 - 77,023,683 (8,386)
query : 1 - 858 (858/916)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR028033 : Domain of unknown function DUF4462
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto 7, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039450)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC054114
Pongo
sp. (Orangutan) : ENSPPYT00000010156
Macaca
sp. (Macaque) : XM_001107359
HIX0039450
HIT000726079 (
NR_040018
)
(Domain of unknown function DUF4462 domain containing protein.)
genome : 77,015,288 - 77,023,737 (8,450)
query : 1 - 969 (969/970)
3 exons
identity = 0.999
3'(0.998;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto_nucl 7.5, cyto 6.5, nucl 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039450)
HIX0039450
HIT000726080 (
NR_040019
)
(Domain of unknown function DUF4462 domain containing protein.)
genome : 77,015,288 - 77,023,737 (8,450)
query : 1 - 922 (922/923)
3 exons
identity = 0.999
3'(0.998;1.000;1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto 7, nucl 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039450)
HIX0039450
HIT000693482 (
ENST00000581579
)
(Domain of unknown function DUF4462 domain containing protein.)
genome : 77,015,291 - 77,023,683 (8,393)
query : 1 - 865 (865/865)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto 7, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039450)
HIX0039450
HIT000689474 (
ENST00000577521
)
(Domain of unknown function DUF4462 domain containing protein.)
genome : 77,015,674 - 77,023,737 (8,064)
query : 1 - 583 (583/583)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto_nucl 7.5, cyto 6.5, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039450)
HIX0014229
HIT000690175 (
ENST00000578229
)
(Complement C1q tumor necrosis factor-related protein 1 isoform 1 precursor.)
genome : 77,018,896 - 77,044,329 (25,434)
query : 1 - 1,294 (1,294/1,294)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, lyso 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014229)
HIX0014229
HIT000725527 (
NM_153372
)
(Complement C1q tumor necrosis factor-related protein 1 isoform 1 precursor.)
genome : 77,019,016 - 77,045,870 (26,855)
query : 1 - 2,715 (2,715/2,742)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, lyso 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014229)
HIX0014229
HIT000692369 (
ENST00000580454
)
(Complement C1q tumor necrosis factor-related protein 1 isoform 1 precursor.)
genome : 77,019,053 - 77,044,329 (25,277)
query : 1 - 1,396 (1,396/1,396)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 22, E.R. 5, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014229)
HIX0195005
pHIT000117803 ( pHIT000117803 )
Representative transcript
(Hypothetical protein.)
genome : 77,019,987 - 77,020,493 (507)
query : 1 - 507 (507/507)
1 exon
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0195005)
CAGE tag :
T17R04723A45
HIX0014229
HIT000691684 (
ENST00000579760
)
(Complement C1q tumor necrosis factor-related protein 1 isoform 1 precursor.)
genome : 77,020,152 - 77,044,557 (24,406)
query : 1 - 1,672 (1,672/1,672)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10, plas 5, extr 5, E.R. 5, extr_plas 5,
mito_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014229)
HIX0014229
HIT000210047 (
NM_030968
)
(Complement C1q tumor necrosis factor-related protein 1 isoform 1 precursor.)
genome : 77,020,158 - 77,045,870 (25,713)
query : 1 - 2,979 (2,979/3,006)
4 exons
identity = 1.000
5'(0.998;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, lyso 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014229)
HIX0014229
HIT000319446 (
NM_198594
)
(Complement C1q tumor necrosis factor-related protein 1 isoform 2.)
genome : 77,020,158 - 77,045,870 (25,713)
query : 1 - 2,810 (2,810/2,837)
3 exons
identity = 1.000
5'(0.998;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27.5, cyto_nucl 15.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014229)
HIX0014229
HIT000252468
(
AY358424
)
Representative transcript
(Complement C1q tumor necrosis factor-related protein 1 isoform 1 precursor.)
genome : 77,020,283 - 77,045,870 (25,588)
query : 91 - 2,946 (2,856/3,090)
4 exons
identity = 0.999
5'(0.993;1.000;1.000;1.000)3'
coverage = 0.936
InterPro :
IPR001073 : Complement C1q protein
IPR008160 : Collagen triple helix repeat
IPR008983 : Tumour necrosis factor-like domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, lyso 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014229)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB171647
Mus
sp. (Mouse) : AK005484
Rattus
sp. (Rat) : BC083720
Bos
sp. (Cow) : BC133322
Danio
sp. (Zebrafish) : ENSDART00000011705
Equus
sp. (Horse) : ENSECAT00000025037
Pongo
sp. (Orangutan) : ENSPPYT00000010157
Tetraodon
sp. (Tetraodon) : GSTENT00034828001
Takifugu
sp. (Fugu) : SINFRUT00000155672
Gallus
sp. (Chicken) : XM_001231906
Monodelphis
sp. (Opossum) : XM_001380316
Canis
sp. (Dog) : XM_843609
Pan
sp. (Chimpanzee) : XR_024585
HIX0014229
HIT000694189 (
ENST00000582295
)
(Hypothetical short protein.)
genome : 77,020,251 - 77,021,134 (884)
query : 1 - 517 (517/517)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, extr 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014229)
HIX0014229
HIT000131772 (
ENST00000339142
)
(Complement C1q tumor necrosis factor-related protein 1 isoform 1 precursor.)
genome : 77,020,253 - 77,045,869 (25,617)
query : 1 - 3,100 (3,100/3,100)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, lyso 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014229)
HIX0014229
HIT000012155
(
AK055541
)
(Complement C1q tumor necrosis factor-related protein 1 isoform 2.)
genome : 77,020,343 - 77,045,869 (25,527)
query : 1 - 2,613 (2,613/2,613)
3 exons
identity = 0.994
5'(0.987;0.993;0.995)3'
coverage = 1.000
InterPro :
IPR001073 : Complement C1q protein
IPR008160 : Collagen triple helix repeat
IPR008983 : Tumour necrosis factor-like domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27.5, cyto_nucl 15.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014229)
HIX0014229
HIT000119138 (
ENST00000311661
)
(Complement C1q tumor necrosis factor-related protein 1 isoform 2.)
genome : 77,020,343 - 77,045,869 (25,527)
query : 1 - 2,624 (2,624/2,624)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27.5, cyto_nucl 15.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014229)
HIX0014229
HIT000727177 (
NR_049769
)
(Complement C1q tumor necrosis factor-related protein 1 isoform 1 precursor.)
genome : 77,021,745 - 77,045,870 (24,126)
query : 1 - 2,833 (2,833/2,860)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014229)
HIX0014229
HIT000475928 (
ENST00000392445
)
(Complement C1q tumor necrosis factor-related protein 1 isoform 1 precursor.)
genome : 77,021,745 - 77,045,870 (24,126)
query : 1 - 2,833 (2,833/2,833)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014229)
HIX0014229
HIT000308501 (
ENST00000354124
)
(Complement C1q tumor necrosis factor-related protein 1 isoform 1 precursor.)
genome : 77,021,745 - 77,044,522 (22,778)
query : 1 - 1,485 (1,485/1,485)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014229)
HIX0014229
HIT000424831
(
AK292034
)
(Complement C1q tumor necrosis factor-related protein 1 isoform 2.)
genome : 77,021,745 - 77,044,522 (22,778)
query : 1 - 1,485 (1,485/1,485)
4 exons
identity = 0.999
5'(1.000;0.994;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001073 : Complement C1q protein
IPR008160 : Collagen triple helix repeat
IPR008983 : Tumour necrosis factor-like domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014229)
HIX0014229
HIT000249930
(
AK172767
)
(Complement C1q tumor necrosis factor-related protein 1 isoform 1 precursor.)
genome : 77,021,762 - 77,045,870 (24,109)
query : 1 - 2,840 (2,840/2,858)
4 exons
identity = 0.990
5'(1.000;0.988;0.993;0.989)3'
coverage = 1.000
InterPro :
IPR001073 : Complement C1q protein
IPR008160 : Collagen triple helix repeat
IPR008983 : Tumour necrosis factor-like domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014229)
HIX0014229
HIT000693675 (
ENST00000581774
)
(Complement C1q tumor necrosis factor-related protein 1 isoform 1 precursor.)
genome : 77,030,267 - 77,044,329 (14,063)
query : 1 - 1,368 (1,368/1,368)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, lyso 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014229)
HIX0014229
HIT000319445 (
NM_198593
)
(Complement C1q tumor necrosis factor-related protein 1 isoform 1 precursor.)
genome : 77,030,381 - 77,045,870 (15,490)
query : 1 - 2,795 (2,795/2,822)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, lyso 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014229)
HIX0014229
HIT000077628
(
AF329840
)
(Complement C1q tumor necrosis factor-related protein 1 isoform 1 precursor.)
genome : 77,030,467 - 77,045,870 (15,404)
query : 7 - 2,740 (2,734/2,759)
4 exons
identity = 0.988
5'(0.987;0.988;0.993;0.988)3'
coverage = 0.998
InterPro :
IPR001073 : Complement C1q protein
IPR008160 : Collagen triple helix repeat
IPR008983 : Tumour necrosis factor-like domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, lyso 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014229)
HIX0014229
HIT000039210
(
BC021553
)
(Complement C1q tumor necrosis factor-related protein 1 isoform 1 precursor.)
genome : 77,030,575 - 77,045,870 (15,296)
query : 1 - 2,602 (2,602/2,624)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001073 : Complement C1q protein
IPR008160 : Collagen triple helix repeat
IPR008983 : Tumour necrosis factor-like domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, lyso 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014229)
HIX0014229
HIT000695782 (
ENST00000583904
)
(Complement C1q tumor necrosis factor-related protein 1 isoform 1 precursor.)
genome : 77,037,808 - 77,044,329 (6,522)
query : 1 - 1,129 (1,129/1,129)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, lyso 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014229)
HIX0014229
HIT000074652
(
AF232905
)
(Complement C1q tumor necrosis factor-related protein 1 isoform 2.)
genome : 77,039,675 - 77,044,548 (4,874)
query : 1 - 1,624 (1,624/1,624)
3 exons
identity = 0.979
5'(0.989;1.000;0.971)3'
coverage = 1.000
InterPro :
IPR001073 : Complement C1q protein
IPR008160 : Collagen triple helix repeat
IPR008983 : Tumour necrosis factor-like domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 16, E.R._mito 5, E.R. 4.5, mito_pero 4.33333,
mito 4, cyto 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014229)
HIX0014229
HIT000246230
(
AJ272138
)
(Complement C1q tumor necrosis factor-related protein 1 isoform 2.)
genome : 77,039,675 - 77,044,548 (4,874)
query : 1 - 1,624 (1,624/1,624)
3 exons
identity = 0.979
5'(0.989;1.000;0.971)3'
coverage = 1.000
InterPro :
IPR001073 : Complement C1q protein
IPR008160 : Collagen triple helix repeat
IPR008983 : Tumour necrosis factor-like domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 16, E.R._mito 5, E.R. 4.5, mito_pero 4.33333,
mito 4, cyto 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014229)
HIX0014229
HIT000692389 (
ENST00000580474
)
(Complement C1q tumor necrosis factor-related protein 1 isoform 1 precursor.)
genome : 77,039,675 - 77,044,548 (4,874)
query : 1 - 1,600 (1,600/1,600)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, E.R. 5.5, E.R._mito 5.5, mito_pero 4.83333,
mito 4, pero 2.5, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014229)
HIX0014229
HIT000082210
(
AK075175
)
(Complement C1q tumor necrosis factor-related protein 1 isoform 2.)
genome : 77,042,708 - 77,045,869 (3,162)
query : 1 - 2,343 (2,343/2,343)
2 exons
identity = 0.988
5'(0.986;0.988)3'
coverage = 1.000
InterPro :
IPR001073 : Complement C1q protein
IPR008160 : Collagen triple helix repeat
IPR008983 : Tumour necrosis factor-like domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27.5, cyto_nucl 15.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014229)
HIX0014229
HIT000694515 (
ENST00000582625
)
(Complement C1q tumor necrosis factor-related protein 1 isoform 2.)
genome : 77,042,983 - 77,044,398 (1,416)
query : 1 - 1,088 (1,088/1,088)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 16, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014229)
HIX0202426
pHIT000117799 ( pHIT000117799 )
(Cytosolic endo-beta-N-acetylglucosaminidase; ENGase; EC=3.2.1.96;)
genome : 77,068,861 - 77,087,557 (18,697)
query : 1 - 2,307 (2,307/2,307)
18 exons
EC number :
EC 3.2.1.96
KEGG pathway :
00511 : Other glycan degradation (9)
InterPro :
IPR001357 : BRCT domain
IPR005201 : Glycoside hydrolase, family 85
GO :
0005737 : Cellular Component : cytoplasm
0033925 : Molecular Function : mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202426)
CAGE tag :
T17F0471439C
HIX0202426
HIT000008792
(
AK025518
)
(Cytosolic endo-beta-N-acetylglucosaminidase.)
genome : 77,071,019 - 77,084,680 (13,662)
query : 1 - 2,727 (2,727/2,752)
9 exons
identity = 0.995
5'(1.000;1.000;0.990;0.993;0.994;1.000;0.994;
0.965;0.995)3'
coverage = 1.000
EC number :
EC 3.2.1.96
KEGG pathway :
00511 : Other glycan degradation (9)
InterPro :
IPR005201 : Glycoside hydrolase, family 85
GO :
0005737 : Cellular Component : cytoplasm
0033925 : Molecular Function : mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20.5, mito_pero 11, nucl 8.5, cyto_nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202426)
HIX0202426
HIT000397595 (
NM_001042573
)
(Cytosolic endo-beta-N-acetylglucosaminidase; ENGase; EC=3.2.1.96;)
genome : 77,071,019 - 77,084,685 (13,667)
query : 1 - 4,494 (4,494/4,494)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.96
KEGG pathway :
00511 : Other glycan degradation (9)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, cyto_mito 12.3333, nucl 8.5,
cyto_nucl 7.33333
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202426)
HIX0202426
HIT000495739
(
AK301115
)
(Cytosolic endo-beta-N-acetylglucosaminidase.)
genome : 77,071,021 - 77,078,631 (7,611)
query : 1 - 1,381 (1,381/1,381)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;0.994;0.993;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.96
KEGG pathway :
00511 : Other glycan degradation (9)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202426)
HIX0202426
HIT000638902 (
ENST00000539857
)
(Cytosolic endo-beta-N-acetylglucosaminidase.)
genome : 77,071,021 - 77,078,631 (7,611)
query : 1 - 1,381 (1,381/1,381)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.96
KEGG pathway :
00511 : Other glycan degradation (9)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 7.5, cyto 7, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202426)
HIX0202426
HIT000690362 (
ENST00000578419
)
(Cytosolic endo-beta-N-acetylglucosaminidase.)
genome : 77,071,021 - 77,078,631 (7,611)
query : 1 - 1,381 (1,381/1,381)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.96
KEGG pathway :
00511 : Other glycan degradation (9)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 7.5, cyto 7, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202426)
HIX0202426
HIT000081082
(
AF512564
)
Representative transcript
(Cytosolic endo-beta-N-acetylglucosaminidase; ENGase; EC=3.2.1.96;)
genome : 77,071,027 - 77,082,778 (11,752)
query : 1 - 2,579 (2,579/2,579)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.96
KEGG pathway :
00511 : Other glycan degradation (9)
InterPro :
IPR001357 : BRCT domain
IPR005201 : Glycoside hydrolase, family 85
GO :
0005737 : Cellular Component : cytoplasm
0033925 : Molecular Function : mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, cyto_mito 12.3333, nucl 8.5,
cyto_nucl 7.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202426)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK048667
Danio
sp. (Zebrafish) : BC129351
Canis
sp. (Dog) : ENSCAFT00000008931
Gallus
sp. (Chicken) : ENSGALT00000019290
Oryzias
sp. (Medaka) : ENSORLT00000021590
Pongo
sp. (Orangutan) : ENSPPYT00000010158
Tetraodon
sp. (Tetraodon) : GSTENT00026132001
Takifugu
sp. (Fugu) : SINFRUT00000129082
Rattus
sp. (Rat) : XM_001081774
Macaca
sp. (Macaque) : XM_001107425
Pan
sp. (Chimpanzee) : XM_001159278
Monodelphis
sp. (Opossum) : XM_001380303
Equus
sp. (Horse) : XM_001490670
HIX0202426
HIT000690952 (
ENST00000579016
)
(Cytosolic endo-beta-N-acetylglucosaminidase; ENGase; EC=3.2.1.96;)
genome : 77,071,027 - 77,082,778 (11,752)
query : 1 - 2,579 (2,579/2,579)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.96
KEGG pathway :
00511 : Other glycan degradation (9)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, cyto_mito 12.3333, nucl 8.5,
cyto_nucl 7.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202426)
HIX0202426
HIT000051537
(
BC035869
)
(Cytosolic endo-beta-N-acetylglucosaminidase.)
genome : 77,073,510 - 77,078,612 (5,103)
query : 21 - 1,381 (1,361/1,381)
6 exons
identity = 0.999
5'(1.000;0.995;1.000;1.000;1.000;0.998)3'
coverage = 0.986
EC number :
EC 3.2.1.96
KEGG pathway :
00511 : Other glycan degradation (9)
InterPro :
IPR005201 : Glycoside hydrolase, family 85
GO :
0005737 : Cellular Component : cytoplasm
0033925 : Molecular Function : mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 9.5, cyto 8, extr_plas 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202426)
HIX0202426
HIT000119116 (
ENST00000311595
)
(Cytosolic endo-beta-N-acetylglucosaminidase.)
genome : 77,073,510 - 77,078,612 (5,103)
query : 21 - 1,381 (1,361/1,381)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.986
EC number :
EC 3.2.1.96
KEGG pathway :
00511 : Other glycan degradation (9)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, mito 11, cyto_nucl 9.66667, cyto 5,
cyto_pero 4.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202426)
HIX0202426
HIT000024546
(
AL110283
)
(Cytosolic endo-beta-N-acetylglucosaminidase.)
genome : 77,076,394 - 77,084,680 (8,287)
query : 2 - 4,667 (4,666/4,704)
10 exons
identity = 0.990
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.991;0.983)3'
coverage = 1.000
EC number :
EC 3.2.1.96
KEGG pathway :
00511 : Other glycan degradation (9)
InterPro :
IPR005201 : Glycoside hydrolase, family 85
GO :
0005737 : Cellular Component : cytoplasm
0033925 : Molecular Function : mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 5, cyto_nucl 5, nucl 3, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202426)
HIX0202426
HIT000115685 (
ENST00000300682
)
(Cytosolic endo-beta-N-acetylglucosaminidase.)
genome : 77,076,394 - 77,084,681 (8,288)
query : 1 - 4,626 (4,626/4,626)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.96
KEGG pathway :
00511 : Other glycan degradation (9)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto_nucl 5.5, cyto 5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202426)
HIX0202426
HIT000695526 (
ENST00000583646
)
(Cytosolic endo-beta-N-acetylglucosaminidase.)
genome : 77,077,102 - 77,078,396 (1,295)
query : 1 - 471 (471/471)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.96
KEGG pathway :
00511 : Other glycan degradation (9)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto_nucl 6.5, cyto 5.5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202426)
HIX0202426
HIT000696436 (
ENST00000584568
)
(Cytosolic endo-beta-N-acetylglucosaminidase.)
genome : 77,078,111 - 77,080,648 (2,538)
query : 1 - 448 (448/448)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.96
KEGG pathway :
00511 : Other glycan degradation (9)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, mito 5, cyto_nucl 4.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202426)
HIX0202426
HIT000694460 (
ENST00000582569
)
(Cytosolic endo-beta-N-acetylglucosaminidase.)
genome : 77,079,168 - 77,080,134 (967)
query : 1 - 439 (439/439)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.96
KEGG pathway :
00511 : Other glycan degradation (9)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 7, cyto_nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202426)
HIX0202426
HIT000694922 (
ENST00000583041
)
(Cytosolic endo-beta-N-acetylglucosaminidase.)
genome : 77,079,383 - 77,080,034 (652)
query : 1 - 482 (482/482)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.96
KEGG pathway :
00511 : Other glycan degradation (9)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 8.5, cyto 7, cyto_mito 6.66667,
nucl 6.5, extr_plas 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202426)
HIX0202426
HIT000689733 (
ENST00000577783
)
(Cytosolic endo-beta-N-acetylglucosaminidase.)
genome : 77,079,633 - 77,080,316 (684)
query : 1 - 514 (514/514)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.96
KEGG pathway :
00511 : Other glycan degradation (9)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202426)
HIX0202426
HIT000691733 (
ENST00000579809
)
(Cytosolic endo-beta-N-acetylglucosaminidase.)
genome : 77,080,329 - 77,082,778 (2,450)
query : 1 - 1,428 (1,428/1,428)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.96
KEGG pathway :
00511 : Other glycan degradation (9)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 13.5, cyto_pero 10.8333, nucl 8,
extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202426)
HIX0202426
HIT000090899
(
BC024213
)
(Cytosolic endo-beta-N-acetylglucosaminidase.)
genome : 77,080,632 - 77,084,680 (4,049)
query : 1 - 3,028 (3,028/3,046)
4 exons
identity = 0.997
5'(1.000;1.000;0.991;0.997)3'
coverage = 1.000
EC number :
EC 3.2.1.96
KEGG pathway :
00511 : Other glycan degradation (9)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 11, nucl 9.5, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202426)
HIX0202426
HIT000697018 (
ENST00000585160
)
(Cytosolic endo-beta-N-acetylglucosaminidase.)
genome : 77,081,372 - 77,081,932 (561)
query : 1 - 284 (284/284)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.96
KEGG pathway :
00511 : Other glycan degradation (9)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito 8, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202426)
HIX0202426
HIT000097163
(
BC042158
)
(Conserved hypothetical protein.)
genome : 77,082,633 - 77,084,680 (2,048)
query : 1 - 2,048 (2,048/2,085)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 9.33333, nucl 7, cyto 5.5, mito 5,
cyto_pero 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202426)
HIX0027156
HIT000398221 (
NM_001082575
)
(RNA binding protein fox-1 homolog 3.)
genome : 77,085,427 - 77,512,230 (426,804)
query : 1 - 2,990 (2,990/3,007)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027156)
HIX0027156
HIT000695339 (
ENST00000583458
)
(RNA binding protein fox-1 homolog 3.)
genome : 77,085,427 - 77,478,680 (393,254)
query : 1 - 2,934 (2,934/2,934)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027156)
HIX0027156
HIT000700256 (
ENST00000588416
)
(RNA binding protein fox-1 homolog 3.)
genome : 77,085,427 - 77,478,680 (393,254)
query : 1 - 2,934 (2,934/2,934)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027156)
HIX0027156
HIT000513765 (
ENST00000415831
)
(RNA binding protein fox-1 homolog 3.)
genome : 77,085,428 - 77,478,563 (393,136)
query : 1 - 2,678 (2,678/2,678)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027156)
HIX0027156
HIT000693941 (
ENST00000582043
)
(RNA binding protein fox-1 homolog 3.)
genome : 77,086,882 - 77,231,887 (145,006)
query : 1 - 1,143 (1,143/1,143)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 15, nucl 11, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027156)
HIX0027156
HIT000704256 (
ENST00000592438
)
(RNA binding protein fox-1 homolog 3.)
genome : 77,086,882 - 77,231,887 (145,006)
query : 1 - 1,143 (1,143/1,143)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 15, nucl 11, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027156)
HIX0027156
HIT000488241
(
AK293617
)
Representative transcript
(RNA binding protein fox-1 homolog 3.)
genome : 77,086,898 - 77,512,230 (425,333)
query : 1 - 1,519 (1,519/1,519)
15 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.996;1.000;1.000;0.993;
1.000)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR025670 : Fox-1 C-terminal domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027156)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK079086
Bos
sp. (Cow) : BC119875
Monodelphis
sp. (Opossum) : ENSMODT00000002596
Oryzias
sp. (Medaka) : ENSORLT00000001107
Pongo
sp. (Orangutan) : ENSPPYT00000010159
Tetraodon
sp. (Tetraodon) : GSTENT00021265001
Takifugu
sp. (Fugu) : SINFRUT00000153952
Takifugu
sp. (Fugu) : SINFRUT00000168279
Macaca
sp. (Macaque) : XM_001109611
Pan
sp. (Chimpanzee) : XM_001159532
Equus
sp. (Horse) : XM_001490633
Danio
sp. (Zebrafish) : XM_001920791
Rattus
sp. (Rat) : XM_213535
Canis
sp. (Dog) : XM_845938
HIX0027156
HIT000551068 (
ENST00000453134
)
(RNA binding protein fox-1 homolog 3.)
genome : 77,086,898 - 77,512,230 (425,333)
query : 1 - 1,519 (1,519/1,519)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027156)
HIX0027156
HIT000692075 (
ENST00000580155
)
(RNA binding protein fox-1 homolog 3.)
genome : 77,086,898 - 77,512,230 (425,333)
query : 1 - 1,519 (1,519/1,519)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027156)
HIX0027156
HIT000699974 (
ENST00000588133
)
(RNA binding protein fox-1 homolog 3.)
genome : 77,086,898 - 77,512,230 (425,333)
query : 1 - 1,519 (1,519/1,519)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027156)
HIX0027156
HIT000044517
(
AK124644
)
(RNA binding protein fox-1 homolog 3.)
genome : 77,086,898 - 77,094,590 (7,693)
query : 1 - 1,201 (1,201/1,201)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR025670 : Fox-1 C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, extr 7, cyto 5.5, cyto_nucl 5.5,
cyto_pero 5.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027156)
HIX0027156
HIT000693299 (
ENST00000581393
)
(RNA binding protein fox-1 homolog 3.)
genome : 77,086,898 - 77,094,590 (7,693)
query : 1 - 1,201 (1,201/1,201)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, extr 7, cyto 5.5, cyto_nucl 5.5,
cyto_pero 5.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027156)
HIX0027156
HIT000699145 (
ENST00000587301
)
(RNA binding protein fox-1 homolog 3.)
genome : 77,086,898 - 77,094,590 (7,693)
query : 1 - 1,201 (1,201/1,201)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, extr 7, cyto 5.5, cyto_nucl 5.5,
cyto_pero 5.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027156)
HIX0027156
HIT000048004
(
AK128131
)
(RNA binding protein fox-1 homolog 3.)
genome : 77,086,903 - 77,096,492 (9,590)
query : 1 - 3,097 (3,097/3,097)
6 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.999)5'
coverage = 1.000
InterPro :
IPR025670 : Fox-1 C-terminal domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, extr 7, cyto 5.5, cyto_nucl 5.5,
cyto_pero 5.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027156)
HIX0027156
HIT000690934 (
ENST00000578998
)
(RNA binding protein fox-1 homolog 3.)
genome : 77,086,929 - 77,096,492 (9,564)
query : 1 - 3,072 (3,072/3,072)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, extr 7, cyto 5.5, cyto_nucl 5.5,
cyto_pero 5.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027156)
HIX0027156
HIT000700448 (
ENST00000588608
)
(RNA binding protein fox-1 homolog 3.)
genome : 77,086,929 - 77,096,492 (9,564)
query : 1 - 3,072 (3,072/3,072)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, extr 7, cyto 5.5, cyto_nucl 5.5,
cyto_pero 5.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027156)
HIX0027156
HIT000694766 (
ENST00000582880
)
(RNA binding protein fox-1 homolog 3.)
genome : 77,088,029 - 77,092,775 (4,747)
query : 1 - 877 (877/877)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, cyto 12.5, extr 10, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027156)
HIX0027156
HIT000699909 (
ENST00000588068
)
(RNA binding protein fox-1 homolog 3.)
genome : 77,088,052 - 77,092,775 (4,724)
query : 1 - 854 (854/854)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, cyto 12.5, extr 10, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027156)
HIX0027156
HIT000694780 (
ENST00000582894
)
(RNA binding protein fox-1 homolog 3.)
genome : 77,088,462 - 77,093,808 (5,347)
query : 1 - 611 (611/611)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, cyto 11, nucl 8, mito 6, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027156)
HIX0027156
HIT000704410 (
ENST00000592592
)
(RNA binding protein fox-1 homolog 3.)
genome : 77,088,462 - 77,093,808 (5,347)
query : 1 - 611 (611/611)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, cyto 11, nucl 8, mito 6, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027156)
HIX0027156
HIT000696642 (
ENST00000584778
)
(RNA binding protein fox-1 homolog 3.)
genome : 77,090,339 - 77,504,950 (414,612)
query : 1 - 1,547 (1,547/1,547)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027156)
HIX0027156
HIT000701609 (
ENST00000589771
)
(RNA binding protein fox-1 homolog 3.)
genome : 77,090,339 - 77,504,950 (414,612)
query : 1 - 1,547 (1,547/1,547)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027156)
HIX0027156
HIT000488529
(
AK293905
)
(RNA binding protein fox-1 homolog 3.)
genome : 77,090,339 - 77,478,681 (388,343)
query : 57 - 1,506 (1,450/1,506)
13 exons
identity = 0.999
3'(1.000;1.000;0.975;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.963
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
IPR025670 : Fox-1 C-terminal domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027156)
HIX0027156
HIT000692423 (
ENST00000580508
)
(Conserved hypothetical protein.)
genome : 77,111,780 - 77,179,554 (67,775)
query : 1 - 260 (260/260)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 5.5, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027156)
HIX0027156
HIT000699297 (
ENST00000587454
)
(Conserved hypothetical protein.)
genome : 77,111,780 - 77,179,554 (67,775)
query : 1 - 260 (260/260)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 5.5, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027156)
HIX0027156
HIT000694036 (
ENST00000582139
)
(Non-protein coding transcript.)
genome : 77,111,785 - 77,204,638 (92,854)
query : 1 - 154 (154/154)
2 exons
identity = 0.981
3'(1.000;0.973)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027156)
HIX0027156
HIT000700716 (
ENST00000588876
)
(Non-protein coding transcript.)
genome : 77,111,785 - 77,204,638 (92,854)
query : 1 - 154 (154/154)
2 exons
identity = 0.981
3'(1.000;0.973)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027156)
HIX0224975
HIT000695857 (
ENST00000583980
)
(Hypothetical short protein.)
genome : 77,128,804 - 77,132,484 (3,681)
query : 1 - 547 (547/547)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, extr 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224975)
HIX0027156
HIT000011507
(
AK054893
)
(Conserved hypothetical protein.)
genome : 77,229,709 - 77,420,202 (190,494)
query : 1 - 2,686 (2,686/2,686)
3 exons
identity = 0.995
3'(0.994;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 8.5, nucl 8, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027156)
HIX0027156
HIT000690824 (
ENST00000578887
)
(Conserved hypothetical protein.)
genome : 77,229,709 - 77,420,202 (190,494)
query : 1 - 2,694 (2,694/2,694)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 8.5, nucl 8, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027156)
HIX0027156
HIT000697888 (
ENST00000586034
)
(Conserved hypothetical protein.)
genome : 77,229,709 - 77,420,202 (190,494)
query : 1 - 2,694 (2,694/2,694)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 8.5, nucl 8, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027156)
HIX0027156
HIT000334688
(
BC093713
)
(Conserved hypothetical protein.)
genome : 77,231,727 - 77,419,971 (188,245)
query : 1 - 445 (445/445)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 8.5, nucl 8, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027156)
HIX0018357
HIT000011593
(
AK054979
)
Representative transcript
(Conserved hypothetical protein.)
genome : 77,264,923 - 77,267,167 (2,245)
query : 2 - 2,241 (2,240/2,241)
1 exon
identity = 0.992
3'(0.992)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 11, nucl 9.5, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018357)
HIX0027156
HIT000694238 (
ENST00000582344
)
(Non-protein coding transcript.)
genome : 77,294,286 - 77,303,909 (9,624)
query : 1 - 321 (321/321)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027156)
HIX0027156
HIT000702225 (
ENST00000590394
)
(Non-protein coding transcript.)
genome : 77,294,286 - 77,303,909 (9,624)
query : 1 - 321 (321/321)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027156)
HIX0027203
HIT000043061
(
AK123188
)
Representative transcript
(Conserved hypothetical protein.)
genome : 77,343,657 - 77,345,450 (1,794)
query : 1 - 1,793 (1,793/1,793)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 13, extr 8, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027203)
HIX0195536
pHIT000117807 ( pHIT000117807 )
Representative transcript
(Hypothetical short protein.)
genome : 77,358,816 - 77,376,518 (17,703)
query : 1 - 228 (228/228)
2 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0195536)
CAGE tag :
T17F0475CA7F
HIX0027224
HIT000044434
(
AK124561
)
Representative transcript
(Conserved hypothetical protein.)
genome : 77,386,578 - 77,390,051 (3,474)
query : 1 - 3,474 (3,474/3,474)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 11.5, nucl 10.5, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027224)
HIX0224409
HIT000689583 (
ENST00000577633
)
(Non-protein coding transcript.)
genome : 77,680,985 - 77,681,058 (74)
query : 1 - 74 (74/74)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224409)
HIX0224409
HIT000689692 (
ENST00000577742
)
(Non-protein coding transcript.)
genome : 77,680,985 - 77,681,058 (74)
query : 1 - 74 (74/74)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224409)
HIX0224409
HIT000725956 (
NR_039893
)
(Non-protein coding transcript.)
genome : 77,680,985 - 77,681,058 (74)
query : 1 - 74 (74/74)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224409)
HIX0039394
HIT000480825 (
ENST00000397549
)
(Conserved hypothetical protein.)
genome : 77,681,075 - 77,686,081 (5,007)
query : 1 - 4,192 (4,192/4,192)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 7, cyto 3.5, cyto_nucl 3.5,
E.R._mito 3.5, mito_pero 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039394)
HIX0039394
HIT000704536 (
ENST00000592718
)
(Conserved hypothetical protein.)
genome : 77,681,075 - 77,686,081 (5,007)
query : 1 - 4,237 (4,237/4,237)
2 exons
identity = 0.988
5'(1.000;0.986)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 7, cyto 3.5, cyto_nucl 3.5,
E.R._mito 3.5, mito_pero 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039394)
HIX0039394
HIT000087021
(
BC008248
)
Representative transcript
(Conserved hypothetical protein.)
genome : 77,681,075 - 77,682,787 (1,713)
query : 1 - 898 (898/912)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 7, cyto 3.5, cyto_nucl 3.5,
E.R._mito 3.5, mito_pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039394)
HIX0039394
HIT000563949
(
AB593148
)
(Conserved hypothetical protein.)
genome : 77,681,132 - 77,686,081 (4,950)
query : 1 - 4,135 (4,135/4,135)
2 exons
identity = 0.996
5'(1.000;0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 6, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039394)
HIX0173745
HIT000437298_04
(
DQ570767
)
Representative transcript
(Non-protein coding transcript.)
genome : 77,695,181 - 77,695,210 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173745)
HIX0027161
HIT000125485 (
ENST00000328313
)
(Ectonucleotide pyrophosphatase/phosphodiesterase family member 7; E-NPP 7; NPP-7; EC=3.1.4.12; Alkaline sphingomyelin phosphodiesterase; Intestinal alkaline sphingomyelinase; Alk-SMase; Precursor;)
genome : 77,704,681 - 77,716,021 (11,341)
query : 1 - 2,043 (2,043/2,043)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.4.12
KEGG pathway :
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027161)
HIX0027161
HIT000684920 (
ENST00000572279
)
(Ectonucleotide pyrophosphatase/phosphodiesterase family member 7; E-NPP 7; NPP-7; EC=3.1.4.12; Alkaline sphingomyelin phosphodiesterase; Intestinal alkaline sphingomyelinase; Alk-SMase; Precursor;)
genome : 77,704,681 - 77,716,021 (11,341)
query : 1 - 2,043 (2,043/2,043)
6 exons
identity = 0.999
5'(0.996;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.4.12
KEGG pathway :
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027161)
HIX0027161
HIT000046123
(
AK126250
)
Representative transcript
(Ectonucleotide pyrophosphatase/phosphodiesterase family member 7; E-NPP 7; NPP-7; EC=3.1.4.12; Alkaline sphingomyelin phosphodiesterase; Intestinal alkaline sphingomyelinase; Alk-SMase; Precursor;)
genome : 77,704,681 - 77,716,017 (11,337)
query : 1 - 2,039 (2,039/2,039)
6 exons
identity = 0.997
5'(0.992;1.000;0.998;0.995;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.4.12
KEGG pathway :
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
InterPro :
IPR002591 : Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase
IPR017849 : Alkaline phosphatase-like, alpha/beta/alpha
IPR017850 : Alkaline-phosphatase-like, core domain
IPR024873 : Ectonucleotide pyrophosphatase/phosphodiesterase family
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027161)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK144474
Rattus
sp. (Rat) : AY568760
Danio
sp. (Zebrafish) : BC124465
Danio
sp. (Zebrafish) : BC154658
Tetraodon
sp. (Tetraodon) : CR724124
Bos
sp. (Cow) : ENSBTAT00000002552
Equus
sp. (Horse) : ENSECAT00000024740
Gallus
sp. (Chicken) : ENSGALT00000022334
Oryzias
sp. (Medaka) : ENSORLT00000001120
Pongo
sp. (Orangutan) : ENSPPYT00000010163
Pan
sp. (Chimpanzee) : ENSPTRT00000017863
Takifugu
sp. (Fugu) : SINFRUT00000151182
Macaca
sp. (Macaque) : XM_001108871
Monodelphis
sp. (Opossum) : XM_001380259
Canis
sp. (Dog) : XM_845707
Pan
sp. (Chimpanzee) : XR_021693
HIX0027161
HIT000052557
(
BC041453
)
(Ectonucleotide pyrophosphatase/phosphodiesterase family member 7; E-NPP 7; NPP-7; EC=3.1.4.12; Alkaline sphingomyelin phosphodiesterase; Intestinal alkaline sphingomyelinase; Alk-SMase; Precursor;)
genome : 77,704,882 - 77,716,021 (11,140)
query : 1 - 1,842 (1,842/1,877)
6 exons
identity = 0.999
5'(0.993;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.4.12
KEGG pathway :
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
InterPro :
IPR002591 : Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase
IPR017849 : Alkaline phosphatase-like, alpha/beta/alpha
IPR017850 : Alkaline-phosphatase-like, core domain
IPR024873 : Ectonucleotide pyrophosphatase/phosphodiesterase family
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, E.R. 7, pero 4, plas 2, lyso 2, golg 2,
mito_pero 2, cyto_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027161)
HIX0027161
HIT000251117
(
AY230663
)
(Ectonucleotide pyrophosphatase/phosphodiesterase family member 7; E-NPP 7; NPP-7; EC=3.1.4.12; Alkaline sphingomyelin phosphodiesterase; Intestinal alkaline sphingomyelinase; Alk-SMase; Precursor;)
genome : 77,704,882 - 77,716,021 (11,140)
query : 1 - 1,842 (1,842/1,877)
6 exons
identity = 0.999
5'(0.993;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.4.12
KEGG pathway :
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
InterPro :
IPR002591 : Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase
IPR017849 : Alkaline phosphatase-like, alpha/beta/alpha
IPR017850 : Alkaline-phosphatase-like, core domain
IPR024873 : Ectonucleotide pyrophosphatase/phosphodiesterase family
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, E.R. 7, pero 4, plas 2, lyso 2, golg 2,
mito_pero 2, cyto_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027161)
HIX0027161
HIT000318142 (
NM_178543
)
(Ectonucleotide pyrophosphatase/phosphodiesterase family member 7; E-NPP 7; NPP-7; EC=3.1.4.12; Alkaline sphingomyelin phosphodiesterase; Intestinal alkaline sphingomyelinase; Alk-SMase; Precursor;)
genome : 77,704,882 - 77,716,021 (11,140)
query : 1 - 1,842 (1,842/1,877)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.4.12
KEGG pathway :
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 13, E.R. 9, golg 4, plas 2, pero 2, lyso 2,
cyto_golg 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027161)
HIX0027161
HIT000252666
(
AY358622
)
(Ectonucleotide pyrophosphatase/phosphodiesterase family member 7; E-NPP 7; NPP-7; EC=3.1.4.12; Alkaline sphingomyelin phosphodiesterase; Intestinal alkaline sphingomyelinase; Alk-SMase; Precursor;)
genome : 77,704,899 - 77,716,018 (11,120)
query : 1 - 1,822 (1,822/1,830)
6 exons
identity = 0.999
5'(1.000;0.993;1.000;1.000;1.000;1.000)3'
coverage = 0.996
EC number :
EC 3.1.4.12
KEGG pathway :
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
InterPro :
IPR002591 : Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase
IPR017849 : Alkaline phosphatase-like, alpha/beta/alpha
IPR017850 : Alkaline-phosphatase-like, core domain
IPR024873 : Ectonucleotide pyrophosphatase/phosphodiesterase family
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 13, E.R. 9, golg 4, plas 2, pero 2, lyso 2,
cyto_golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027161)
HIX0027161
HIT000680915_02 (
ENST00000567922
)
(Ectonucleotide pyrophosphatase/phosphodiesterase family member 7 precursor.)
genome : 77,704,904 - 77,705,162 (259)
query : 1 - 259 (259/259)
1 exon
identity = 0.961
5'(0.961)3'
coverage = 1.000
EC number :
EC 3.1.4.12
KEGG pathway :
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 6, cyto 3, E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027161)
HIX0027161
HIT000048535
(
AK128662
)
(Ectonucleotide pyrophosphatase/phosphodiesterase family member 7 precursor.)
genome : 77,709,340 - 77,713,367 (4,028)
query : 1 - 2,002 (2,002/2,002)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.4.12
KEGG pathway :
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
InterPro :
IPR017850 : Alkaline-phosphatase-like, core domain
IPR024873 : Ectonucleotide pyrophosphatase/phosphodiesterase family
GO :
0003824 : Molecular Function : catalytic activity
0008152 : Biological Process : metabolic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 11, cyto 8.5, cyto_mito 8.5, mito 7.5, plas 1,
extr 1, nucl 1, E.R. 1, golg 1, extr_plas 1, E.R._golg 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027161)
HIX0027161
HIT000687940 (
ENST00000575794
)
(Ectonucleotide pyrophosphatase/phosphodiesterase family member 7 precursor.)
genome : 77,709,340 - 77,713,367 (4,028)
query : 1 - 2,002 (2,002/2,002)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.4.12
KEGG pathway :
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 11, cyto 8.5, cyto_mito 8.5, mito 7.5, plas 1,
extr 1, nucl 1, E.R. 1, golg 1, extr_plas 1, E.R._golg 1
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027161)
HIX0027161
HIT000688564 (
ENST00000576512
)
(Ectonucleotide pyrophosphatase/phosphodiesterase family member 7 precursor.)
genome : 77,709,340 - 77,713,367 (4,028)
query : 1 - 2,002 (2,002/2,002)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.4.12
KEGG pathway :
00600 : Sphingolipid metabolism (25)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 11, cyto 8.5, cyto_mito 8.5, mito 7.5, plas 1,
extr 1, nucl 1, E.R. 1, golg 1, extr_plas 1, E.R._golg 1
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027161)
HIX0014232
HIT000118873 (
ENST00000310942
)
(Chromobox protein homolog 2;)
genome : 77,751,931 - 77,761,782 (9,852)
query : 1 - 4,644 (4,644/4,644)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014232)
HIX0014232
HIT000686249 (
ENST00000573833
)
(Chromobox protein homolog 2;)
genome : 77,751,931 - 77,761,782 (9,852)
query : 1 - 4,644 (4,644/4,644)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014232)
HIX0014232
eHIT000008049 ( ESTsASS_17_1242 )
(Non-protein coding transcript.)
genome : 77,751,943 - 77,758,162 (6,220)
query : 1 - 979 (979/979)
6 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014232)
ESTs used for assembly :
CN367091,CN367085,BE781770,CN367087
HIX0014232
HIT000684226 (
ENST00000571484
)
(Chromobox protein homolog 2; M33; Modifier 3 protein;)
genome : 77,751,962 - 77,753,538 (1,577)
query : 1 - 567 (567/567)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014232)
HIX0014232
HIT000687069 (
ENST00000574778
)
(Chromobox protein homolog 2; M33; Modifier 3 protein;)
genome : 77,751,962 - 77,753,538 (1,577)
query : 1 - 567 (567/567)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014232)
HIX0014232
HIT000366841 (
NM_005189
)
(Chromobox protein homolog 2;)
genome : 77,751,977 - 77,761,449 (9,473)
query : 1 - 4,265 (4,265/4,265)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014232)
HIX0014232
HIT000210794 (
NM_032647
)
(Chromobox protein homolog 2 isoform 2.)
genome : 77,751,977 - 77,756,331 (4,355)
query : 1 - 1,077 (1,077/1,077)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014232)
HIX0014232
HIT000031819
(
BC004252
)
Representative transcript
(Chromobox protein homolog 2 isoform 2.)
genome : 77,751,993 - 77,756,331 (4,339)
query : 1 - 1,061 (1,061/1,131)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.995
InterPro :
IPR000953 : Chromo/chromo shadow domain
IPR016197 : Chromo domain-like
IPR017956 : AT hook, DNA-binding motif
IPR017984 : Chromo domain subgroup
IPR023779 : Chromo domain, conserved site
IPR023780 : Chromo domain
GO :
0003677 : Molecular Function : DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014232)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : BC052140
Gallus
sp. (Chicken) : CR338679
Oryzias
sp. (Medaka) : EF537027
Monodelphis
sp. (Opossum) : ENSMODT00000033713
Pongo
sp. (Orangutan) : ENSPPYT00000010164
Takifugu
sp. (Fugu) : SINFRUT00000181469
Pan
sp. (Chimpanzee) : XR_024636
HIX0014232
HIT000110446 (
ENST00000269399
)
(Chromobox protein homolog 2 isoform 2.)
genome : 77,751,993 - 77,756,331 (4,339)
query : 1 - 1,061 (1,061/1,061)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014232)
HIX0014232
HIT000688693 (
ENST00000576666
)
(Chromobox protein homolog 2 isoform 2.)
genome : 77,751,993 - 77,756,331 (4,339)
query : 1 - 1,061 (1,061/1,061)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014232)
HIX0014232
HIT000388078
(
BC119759
)
(Chromobox protein homolog 2 isoform 2.)
genome : 77,752,006 - 77,756,033 (4,028)
query : 1 - 750 (750/750)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000953 : Chromo/chromo shadow domain
IPR016197 : Chromo domain-like
IPR017956 : AT hook, DNA-binding motif
IPR017984 : Chromo domain subgroup
IPR023779 : Chromo domain, conserved site
IPR023780 : Chromo domain
GO :
0003677 : Molecular Function : DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014232)
HIX0014232
HIT000388079
(
BC119760
)
(Chromobox protein homolog 2 isoform 2.)
genome : 77,752,006 - 77,756,033 (4,028)
query : 1 - 750 (750/750)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000953 : Chromo/chromo shadow domain
IPR016197 : Chromo domain-like
IPR017956 : AT hook, DNA-binding motif
IPR017984 : Chromo domain subgroup
IPR023779 : Chromo domain, conserved site
IPR023780 : Chromo domain
GO :
0003677 : Molecular Function : DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014232)
HIX0014232
HIT000026093
(
AL157459
)
(Hypothetical protein.)
genome : 77,759,429 - 77,761,781 (2,353)
query : 14 - 2,366 (2,353/2,390)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 3.5, cyto_nucl 3, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014232)
HIX0195538
pHIT000117813 ( pHIT000117813 )
Representative transcript
(Hypothetical protein.)
genome : 77,763,540 - 77,764,291 (752)
query : 1 - 474 (474/474)
2 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0195538)
CAGE tag :
T17F047CC7ED
HIX0014234
HIT000110439 (
ENST00000269385
)
(Chromobox protein homolog 8; Polycomb 3 homolog; Pc3; hPc3; Rectachrome 1;)
genome : 77,765,931 - 77,770,915 (4,985)
query : 1 - 3,791 (3,791/3,791)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014234)
HIX0014234
HIT000683289 (
ENST00000570393
)
(Chromobox protein homolog 8; Polycomb 3 homolog; Pc3; hPc3; Rectachrome 1;)
genome : 77,765,931 - 77,770,915 (4,985)
query : 1 - 3,791 (3,791/3,791)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014234)
HIX0014234
HIT000072591
(
AF174482
)
Representative transcript
(Chromobox protein homolog 8; Polycomb 3 homolog; Pc3; hPc3; Rectachrome 1;)
genome : 77,768,176 - 77,770,890 (2,715)
query : 1 - 1,521 (1,521/1,542)
5 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.994)5'
coverage = 0.986
InterPro :
IPR000953 : Chromo/chromo shadow domain
IPR016197 : Chromo domain-like
IPR023779 : Chromo domain, conserved site
IPR023780 : Chromo domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014234)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AF180370
Danio
sp. (Zebrafish) : BC095631
Rattus
sp. (Rat) : BC099206
Bos
sp. (Cow) : BC120326
Danio
sp. (Zebrafish) : BC125904
Equus
sp. (Horse) : ENSECAT00000020451
Oryzias
sp. (Medaka) : ENSORLT00000011288
Takifugu
sp. (Fugu) : SINFRUT00000154743
Macaca
sp. (Macaque) : XM_001109073
Gallus
sp. (Chicken) : XM_001231756
Pan
sp. (Chimpanzee) : XM_523736
Canis
sp. (Dog) : XM_845656
HIX0014234
HIT000208005 (
NM_020649
)
(Chromobox protein homolog 8; Polycomb 3 homolog; Pc3; hPc3; Rectachrome 1;)
genome : 77,768,177 - 77,770,915 (2,739)
query : 1 - 1,545 (1,545/1,561)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014234)
HIX0014234
HIT000034318
(
BC009376
)
(Chromobox protein homolog 8; Polycomb 3 homolog; Pc3; hPc3; Rectachrome 1;)
genome : 77,768,183 - 77,770,868 (2,686)
query : 1 - 1,492 (1,492/1,511)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000953 : Chromo/chromo shadow domain
IPR016197 : Chromo domain-like
IPR023779 : Chromo domain, conserved site
IPR023780 : Chromo domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014234)
HIX0014234
HIT000034091
(
BC008937
)
(Chromobox protein homolog 8; Polycomb 3 homolog; Pc3; hPc3; Rectachrome 1;)
genome : 77,768,192 - 77,770,812 (2,621)
query : 1 - 1,427 (1,427/1,455)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000953 : Chromo/chromo shadow domain
IPR016197 : Chromo domain-like
IPR023779 : Chromo domain, conserved site
IPR023780 : Chromo domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014234)
HIX0014234
HIT000038610
(
BC019289
)
(Chromobox protein homolog 8; Polycomb 3 homolog; Pc3; hPc3; Rectachrome 1;)
genome : 77,768,192 - 77,770,812 (2,621)
query : 1 - 1,427 (1,427/1,455)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000953 : Chromo/chromo shadow domain
IPR016197 : Chromo domain-like
IPR023779 : Chromo domain, conserved site
IPR023780 : Chromo domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014234)
HIX0014234
HIT000075557
(
AF266479
)
(Chromobox protein homolog 8; Polycomb 3 homolog; Pc3; hPc3; Rectachrome 1;)
genome : 77,768,176 - 77,770,846 (2,671)
query : 1 - 1,477 (1,477/1,484)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 0.995
InterPro :
IPR000953 : Chromo/chromo shadow domain
IPR016197 : Chromo domain-like
IPR023779 : Chromo domain, conserved site
IPR023780 : Chromo domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014234)
HIX0014234
HIT000081595
(
AK074560
)
(Chromobox protein homolog 8; Polycomb 3 homolog; Pc3; hPc3; Rectachrome 1;)
genome : 77,768,193 - 77,770,915 (2,723)
query : 1 - 1,529 (1,529/1,529)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000953 : Chromo/chromo shadow domain
IPR016197 : Chromo domain-like
IPR023779 : Chromo domain, conserved site
IPR023780 : Chromo domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014234)
HIX0014234
HIT000511326 (
ENST00000413392
)
(Chromobox protein homolog 8.)
genome : 77,768,848 - 77,772,130 (3,283)
query : 1 - 777 (777/777)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014234)
HIX0014234
HIT000687911 (
ENST00000575761
)
(Chromobox protein homolog 8.)
genome : 77,768,848 - 77,772,130 (3,283)
query : 1 - 777 (777/777)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014234)
HIX0014234
HIT000525734 (
ENST00000427800
)
(Chromobox protein homolog 8.)
genome : 77,769,003 - 77,775,332 (6,330)
query : 1 - 665 (665/665)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014234)
HIX0014234
HIT000683592 (
ENST00000570747
)
(Chromobox protein homolog 8.)
genome : 77,769,003 - 77,775,332 (6,330)
query : 1 - 665 (665/665)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014234)
HIX0014234
HIT000589254 (
ENST00000485449
)
(Chromobox protein homolog 8.)
genome : 77,769,193 - 77,775,482 (6,290)
query : 1 - 581 (581/581)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014234)
HIX0014234
HIT000687737 (
ENST00000575553
)
(Chromobox protein homolog 8.)
genome : 77,769,193 - 77,775,482 (6,290)
query : 1 - 581 (581/581)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014234)
HIX0224626
HIT000683391 (
ENST00000570512
)
(Hypothetical short protein.)
genome : 77,774,397 - 77,776,326 (1,930)
query : 1 - 605 (605/605)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224626)
HIX0174133
HIT000557078 (
ENST00000459144
)
(Non-protein coding transcript.)
genome : 77,784,478 - 77,784,573 (96)
query : 1 - 96 (96/96)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0174133)
HIX0224745
HIT000688953 (
ENST00000576963
)
(Conserved hypothetical protein.)
genome : 77,797,251 - 77,801,503 (4,253)
query : 1 - 1,788 (1,788/1,788)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 5.5, cyto_nucl 4.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224745)
HIX0014237
HIT000200465 (
NM_003655
)
(E3 SUMO-protein ligase CBX4; EC=6.3.2.-; Chromobox protein homolog 4; Polycomb 2 homolog; Pc2; hPc2;)
genome : 77,806,955 - 77,813,213 (6,259)
query : 1 - 2,649 (2,649/2,655)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014237)
HIX0014237
HIT000110445 (
ENST00000269397
)
(E3 SUMO-protein ligase CBX4; EC=6.3.2.-; Chromobox protein homolog 4; Polycomb 2 homolog; Pc2; hPc2;)
genome : 77,806,955 - 77,813,228 (6,274)
query : 1 - 2,664 (2,664/2,664)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014237)
HIX0014237
HIT000036929
(
BC014967
)
Representative transcript
(E3 SUMO-protein ligase CBX4; EC=6.3.2.-; Chromobox protein homolog 4; Polycomb 2 homolog; Pc2; mPc2;)
genome : 77,807,093 - 77,813,069 (5,977)
query : 1 - 1,557 (1,557/1,578)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
InterPro :
IPR000953 : Chromo/chromo shadow domain
IPR016197 : Chromo domain-like
IPR017984 : Chromo domain subgroup
IPR023779 : Chromo domain, conserved site
IPR023780 : Chromo domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014237)
HIX0014237
HIT000484979
(
EU439707
)
(E3 SUMO-protein ligase CBX4; EC=6.3.2.-; Chromobox protein homolog 4; Polycomb 2 homolog; Pc2; hPc2;)
genome : 77,807,093 - 77,813,246 (6,154)
query : 1 - 2,549 (2,549/2,567)
5 exons
identity = 0.994
3'(0.997;1.000;1.000;1.000;0.962)5'
coverage = 1.000
EC number :
EC 6.3.2.-
InterPro :
IPR000953 : Chromo/chromo shadow domain
IPR016197 : Chromo domain-like
IPR017984 : Chromo domain subgroup
IPR023779 : Chromo domain, conserved site
IPR023780 : Chromo domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014237)
HIX0014237
HIT000062276
(
AF013956
)
(E3 SUMO-protein ligase CBX4; EC=6.3.2.-; Chromobox protein homolog 4; Polycomb 2 homolog; Pc2; hPc2;)
genome : 77,807,738 - 77,813,229 (5,492)
query : 3 - 1,863 (1,861/1,867)
5 exons
identity = 0.984
3'(0.992;1.000;1.000;1.000;0.927)5'
coverage = 0.997
EC number :
EC 6.3.2.-
InterPro :
IPR000953 : Chromo/chromo shadow domain
IPR016197 : Chromo domain-like
IPR017984 : Chromo domain subgroup
IPR023779 : Chromo domain, conserved site
IPR023780 : Chromo domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014237)
HIX0014237
HIT000253473
(
AY390430
)
(E3 SUMO-protein ligase CBX4; EC=6.3.2.-; Chromobox protein homolog 4; Polycomb 2 homolog; Pc2; mPc2;)
genome : 77,807,758 - 77,813,050 (5,293)
query : 1 - 873 (873/873)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
InterPro :
IPR000953 : Chromo/chromo shadow domain
IPR016197 : Chromo domain-like
IPR017984 : Chromo domain subgroup
IPR023779 : Chromo domain, conserved site
IPR023780 : Chromo domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014237)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : BC129311
Equus
sp. (Horse) : ENSECAT00000000996
Monodelphis
sp. (Opossum) : ENSMODT00000002656
Oryzias
sp. (Medaka) : ENSORLT00000002325
Oryzias
sp. (Medaka) : ENSORLT00000011276
Pongo
sp. (Orangutan) : ENSPPYT00000010165
Takifugu
sp. (Fugu) : SINFRUT00000132657
Mus
sp. (Mouse) : U63387
Macaca
sp. (Macaque) : XM_001109437
Rattus
sp. (Rat) : XM_576815
Canis
sp. (Dog) : XM_845609
HIX0014237
HIT000222690
(
U94344
)
(E3 SUMO-protein ligase CBX4.)
genome : 77,807,761 - 77,808,072 (312)
query : 1 - 312 (312/312)
1 exon
identity = 0.984
3'(0.984)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, cyto 14, nucl 13, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014237)
HIX0014237
HIT000546244 (
ENST00000448310
)
(E3 SUMO-protein ligase CBX4.)
genome : 77,808,843 - 77,813,186 (4,344)
query : 1 - 718 (718/718)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014237)
HIX0014237
HIT000598496 (
ENST00000495122
)
(E3 SUMO-protein ligase CBX4.)
genome : 77,808,942 - 77,811,680 (2,739)
query : 1 - 490 (490/490)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 12, cyto_nucl 10.5, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014237)
HIX0014237
HIT000597942 (
ENST00000494546
)
(E3 SUMO-protein ligase CBX4.)
genome : 77,811,545 - 77,813,212 (1,668)
query : 1 - 432 (432/432)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014237)
HIX0224622
HIT000683301 (
ENST00000570408
)
(Hypothetical short protein.)
genome : 77,821,857 - 77,823,909 (2,053)
query : 1 - 324 (324/324)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 13.5, extr 9, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224622)
HIX0202580
HIT000057569
(
BX648922
)
Representative transcript
(Conserved hypothetical protein.)
genome : 77,889,052 - 77,900,524 (11,473)
query : 1 - 5,270 (5,270/5,300)
6 exons
identity = 0.999
3'(0.994;1.000;0.996;1.000;1.000;0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 13, cyto 13, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202580)
HIX0202580
HIT000688752 (
ENST00000576738
)
(Conserved hypothetical protein.)
genome : 77,889,051 - 77,900,524 (11,474)
query : 1 - 5,271 (5,271/5,271)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 13, cyto 13, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202580)
HIX0039479
HIT000097986
(
BC044939
)
Representative transcript
(Conserved hypothetical protein.)
genome : 77,893,156 - 77,897,793 (4,638)
query : 1 - 1,524 (1,524/1,590)
2 exons
identity = 0.988
5'(1.000;0.985)3'
coverage = 0.990
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039479)
HIX0039479
HIT000686852 (
ENST00000574526
)
(Conserved hypothetical protein.)
genome : 77,893,156 - 77,897,809 (4,654)
query : 1 - 1,540 (1,540/1,540)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039479)
HIX0039479
HIT000684985 (
ENST00000572353
)
(Hypothetical short protein.)
genome : 77,893,173 - 77,899,261 (6,089)
query : 1 - 540 (540/540)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto_nucl 5, nucl 4.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039479)
HIX0224138
HIT000260511
(
BC062601
)
Representative transcript
(Conserved hypothetical protein.)
genome : 77,906,142 - 77,908,391 (2,250)
query : 1 - 2,250 (2,250/2,299)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, extr 12, cyto_nucl 10.5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224138)
HIX0224138
HIT000016790
(
AK091923
)
(Conserved hypothetical protein.)
genome : 77,906,143 - 77,908,961 (2,819)
query : 1 - 2,819 (2,819/2,819)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18.5, extr_plas 10, mito_pero 4.16667, cyto 4,
E.R._mito 3.16667, mito 3, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224138)
HIX0224550
HIT000125264 (
ENST00000327910
)
(Conserved hypothetical protein.)
genome : 77,910,551 - 77,910,992 (442)
query : 1 - 441 (441/441)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224550)
HIX0039362
HIT000022138
(
AK097283
)
Representative transcript
(Hypothetical protein.)
genome : 77,911,757 - 77,913,985 (2,229)
query : 1 - 2,229 (2,229/2,230)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0039362)
HIX0224181
HIT000040512
(
BC028290
)
Representative transcript
(TBC1 domain family member 16 isoform a.)
genome : 77,913,820 - 78,009,647 (95,828)
query : 1 - 3,258 (3,258/3,303)
12 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000195 : Rab-GTPase-TBC domain
GO :
0005097 : Molecular Function : Rab GTPase activator activity
0032313 : Biological Process : regulation of Rab GTPase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 13, mito 6, cyto 5, E.R._mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224181)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK047555
Equus
sp. (Horse) : ENSECAT00000019111
Oryzias
sp. (Medaka) : ENSORLT00000011263
Pongo
sp. (Orangutan) : ENSPPYT00000010166
Tetraodon
sp. (Tetraodon) : GSTENT00033405001
Takifugu
sp. (Fugu) : SINFRUT00000132660
Macaca
sp. (Macaque) : XM_001109890
Pan
sp. (Chimpanzee) : XM_001159856
Gallus
sp. (Chicken) : XM_001231438
Monodelphis
sp. (Opossum) : XM_001370931
Rattus
sp. (Rat) : XM_221188
Canis
sp. (Dog) : XM_540469
Bos
sp. (Cow) : XM_869515
HIX0224181
HIT000487418
(
AB449902
)
(TBC1 domain family member 16 isoform a.)
genome : 77,914,658 - 77,987,346 (72,689)
query : 1 - 2,304 (2,304/2,304)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000195 : Rab-GTPase-TBC domain
GO :
0005097 : Molecular Function : Rab GTPase activator activity
0032313 : Biological Process : regulation of Rab GTPase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 13, mito 6, cyto 5, E.R._mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224181)
HIX0224181
HIT000086027
(
BC001525
)
(TBC1 domain family member 16 isoform d.)
genome : 77,917,655 - 77,924,627 (6,973)
query : 1 - 1,141 (1,141/1,187)
7 exons
identity = 0.998
3'(0.992;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR000195 : Rab-GTPase-TBC domain
GO :
0005097 : Molecular Function : Rab GTPase activator activity
0032313 : Biological Process : regulation of Rab GTPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, nucl 8, E.R._mito 8, cyto_nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224181)
HIX0224181
HIT000725086 (
NM_001271846
)
(TBC1 domain family member 16 isoform d.)
genome : 77,917,652 - 77,924,656 (7,005)
query : 1 - 1,173 (1,173/1,186)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, nucl 8, E.R._mito 8, cyto_nucl 7.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224181)
HIX0224181
HIT000685413 (
ENST00000572862
)
(TBC1 domain family member 16 isoform d.)
genome : 77,917,655 - 77,924,627 (6,973)
query : 1 - 1,141 (1,141/1,141)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, nucl 8, E.R._mito 8, cyto_nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224181)
HIX0224181
HIT000683271 (
ENST00000570373
)
(TBC1 domain family member 16 isoform b.)
genome : 77,917,844 - 77,924,633 (6,790)
query : 1 - 961 (961/961)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, nucl 8, E.R._mito 8, cyto_nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224181)
HIX0224181
HIT000686608 (
ENST00000574241
)
(TBC1 domain family member 16 isoform b.)
genome : 77,921,443 - 77,925,812 (4,370)
query : 1 - 771 (771/771)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 15, cyto 10.5, mito_nucl 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224181)
HIX0224181
HIT000686205 (
ENST00000573782
)
(TBC1 domain family member 16 isoform a.)
genome : 77,921,447 - 77,924,629 (3,183)
query : 1 - 685 (685/685)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224181)
HIX0224181
HIT000686769 (
ENST00000574427
)
(TBC1 domain family member 16 isoform a.)
genome : 77,921,494 - 77,924,632 (3,139)
query : 1 - 683 (683/683)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 13, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224181)
HIX0224181
HIT000684561 (
ENST00000571872
)
(TBC1 domain family member 16 isoform a.)
genome : 77,925,249 - 77,967,433 (42,185)
query : 1 - 559 (559/567)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.986
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, nucl 9.5, extr 8, cyto_nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224181)
HIX0224739
HIT000688664 (
ENST00000576632
)
(Hypothetical short protein.)
genome : 77,965,743 - 77,966,640 (898)
query : 1 - 443 (443/443)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
This sequence is too short.
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224739)
HIX0224371
HIT000687616 (
ENST00000575404
)
(Hypothetical short protein.)
genome : 77,997,693 - 77,999,906 (2,214)
query : 1 - 415 (415/415)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 5.5, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224371)
HIX0224371
HIT000683772 (
ENST00000570952
)
(Hypothetical short protein.)
genome : 77,997,730 - 77,999,906 (2,177)
query : 1 - 381 (381/381)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 5.5, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224371)
HIX0224083
pHIT000117832 ( pHIT000117832 )
(Conserved hypothetical protein.)
genome : 78,010,091 - 78,073,574 (63,484)
query : 1 - 3,438 (3,438/3,438)
20 exons
InterPro :
IPR013956 : E3 ubiquitin ligase, BRE1
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224083)
CAGE tag :
T17F0481EFB2
HIX0224083
HIT000684911 (
ENST00000572270
)
(Conserved hypothetical protein.)
genome : 78,010,451 - 78,013,964 (3,514)
query : 1 - 460 (460/460)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 7, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224083)
HIX0224083
HIT000686481 (
ENST00000574099
)
(Conserved hypothetical protein.)
genome : 78,010,460 - 78,013,986 (3,527)
query : 1 - 537 (537/537)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 14.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224083)
HIX0224083
HIT000688143 (
ENST00000576033
)
(Conserved hypothetical protein.)
genome : 78,010,460 - 78,013,904 (3,445)
query : 1 - 466 (466/466)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 15, nucl 10.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224083)
HIX0224083
HIT000684747 (
ENST00000572083
)
(Conserved hypothetical protein.)
genome : 78,010,463 - 78,014,334 (3,872)
query : 1 - 816 (816/816)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 15, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224083)
HIX0224083
HIT000688327 (
ENST00000576241
)
(Conserved hypothetical protein.)
genome : 78,011,921 - 78,021,253 (9,333)
query : 15 - 714 (700/714)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.980
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 15, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224083)
HIX0224083
HIT000001355
(
AB046860
)
Representative transcript
(Coiled-coil domain-containing protein 40;)
genome : 78,022,169 - 78,074,403 (52,235)
query : 1 - 3,795 (3,795/3,795)
16 exons
identity = 1.000
5'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, nucl 8, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224083)
HIX0224083
HIT000687087 (
ENST00000574799
)
(E3 ubiquitin ligase, BRE1 domain containing protein.)
genome : 78,022,169 - 78,074,403 (52,235)
query : 1 - 3,795 (3,795/3,795)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, nucl 7, extr 1, E.R. 1, pero 1, cysk 1
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224083)
HIX0224083
HIT000049955
(
AK130684
)
(Coiled-coil domain-containing protein 40; Protein links;)
genome : 78,026,692 - 78,033,287 (6,596)
query : 1 - 2,048 (2,048/2,048)
3 exons
identity = 0.998
5'(1.000;0.998;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, nucl 10.5, cyto_nucl 9, cyto 6.5,
E.R._mito 6.5, mito_pero 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224083)
HIX0224083
HIT000683831 (
ENST00000571028
)
(Conserved hypothetical protein.)
genome : 78,032,724 - 78,041,087 (8,364)
query : 1 - 593 (593/593)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 11, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224083)
HIX0224083
HIT000026681
(
AL713758
)
(Coiled-coil domain-containing protein 40;)
genome : 78,055,242 - 78,071,705 (16,464)
query : 1 - 3,934 (3,934/3,962)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224083)
HIX0224083
HIT000684896 (
ENST00000572253
)
(Conserved hypothetical protein.)
genome : 78,055,242 - 78,071,733 (16,492)
query : 1 - 3,962 (3,962/3,962)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224083)
HIX0224083
HIT000013197
(
AK056583
)
(E3 ubiquitin ligase, BRE1 domain containing protein.)
genome : 78,055,459 - 78,074,407 (18,949)
query : 1 - 2,577 (2,577/2,577)
10 exons
identity = 0.998
5'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
0.994;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR013956 : E3 ubiquitin ligase, BRE1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 6, mito 5, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224083)
HIX0224083
HIT000687637 (
ENST00000575431
)
(E3 ubiquitin ligase, BRE1 domain containing protein.)
genome : 78,061,313 - 78,069,136 (7,824)
query : 1 - 551 (551/551)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224083)
HIX0224083
HIT000687200 (
ENST00000574933
)
(Hypothetical short protein.)
genome : 78,061,502 - 78,062,011 (510)
query : 1 - 326 (326/326)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224083)
HIX0224083
HIT000686308 (
ENST00000573903
)
(Non-protein coding transcript.)
genome : 78,061,904 - 78,065,944 (4,041)
query : 1 - 561 (561/561)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224083)
HIX0225144
HIT000725670 (
NR_039607
)
(Non-protein coding transcript.)
genome : 78,072,627 - 78,072,676 (50)
query : 1 - 50 (50/50)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0225144)
HIX0027175
HIT000197201 (
NM_000152
)
(Lysosomal alpha-glucosidase; EC=3.2.1.20; Acid maltase; Aglucosidase alfa; Contains: 76 kDa lysosomal alpha-glucosidase; Contains: 70 kDa lysosomal alpha-glucosidase; Precursor;)
genome : 78,075,355 - 78,093,679 (18,325)
query : 1 - 3,775 (3,775/3,782)
20 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.998
EC number :
EC 3.2.1.20
KEGG pathway :
00052 : Galactose metabolism (37)
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, lyso 10, golg 5, extr_plas 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027175)
HIX0027175
HIT000397913 (
NM_001079803
)
(Lysosomal alpha-glucosidase; EC=3.2.1.20; Acid maltase; Aglucosidase alfa; Contains: 76 kDa lysosomal alpha-glucosidase; Contains: 70 kDa lysosomal alpha-glucosidase; Precursor;)
genome : 78,075,355 - 78,093,679 (18,325)
query : 1 - 3,590 (3,590/3,597)
21 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.998
EC number :
EC 3.2.1.20
KEGG pathway :
00052 : Galactose metabolism (37)
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, lyso 10, golg 5, extr_plas 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027175)
HIX0027175
HIT000397914 (
NM_001079804
)
(Lysosomal alpha-glucosidase; EC=3.2.1.20; Acid maltase; Aglucosidase alfa; Contains: 76 kDa lysosomal alpha-glucosidase; Contains: 70 kDa lysosomal alpha-glucosidase; Precursor;)
genome : 78,075,355 - 78,093,679 (18,325)
query : 1 - 3,510 (3,510/3,517)
20 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.998
EC number :
EC 3.2.1.20
KEGG pathway :
00052 : Galactose metabolism (37)
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, lyso 10, golg 5, extr_plas 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027175)
HIX0027175
HIT000683644 (
ENST00000570803
)
(Lysosomal alpha-glucosidase; EC=3.2.1.20; Acid maltase; Aglucosidase alfa; Contains: 76 kDa lysosomal alpha-glucosidase; Contains: 70 kDa lysosomal alpha-glucosidase; Precursor;)
genome : 78,075,355 - 78,081,517 (6,163)
query : 1 - 956 (956/956)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.20
KEGG pathway :
00052 : Galactose metabolism (37)
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027175)
HIX0027175
HIT000689072 (
ENST00000577106
)
(Lysosomal alpha-glucosidase; EC=3.2.1.20; Acid maltase; Aglucosidase alfa; Contains: 76 kDa lysosomal alpha-glucosidase; Contains: 70 kDa lysosomal alpha-glucosidase; Precursor;)
genome : 78,075,386 - 78,079,627 (4,242)
query : 1 - 812 (812/812)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.20
KEGG pathway :
00052 : Galactose metabolism (37)
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027175)
HIX0027175
HIT000052383
(
BC040431
)
Representative transcript
(Lysosomal alpha-glucosidase; EC=3.2.1.20; Acid maltase; Aglucosidase alfa; Contains: 76 kDa lysosomal alpha-glucosidase; Contains: 70 kDa lysosomal alpha-glucosidase; Precursor;)
genome : 78,075,393 - 78,093,675 (18,283)
query : 1 - 3,548 (3,548/3,687)
21 exons
identity = 0.999
5'(1.000;1.000;0.998;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.994;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.20
KEGG pathway :
00052 : Galactose metabolism (37)
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
InterPro :
IPR000322 : Glycoside hydrolase family 31
IPR000519 : P-type trefoil
IPR011013 : Galactose mutarotase-like domain
IPR017853 : Glycoside hydrolase superfamily
IPR017957 : P-type trefoil, conserved site
IPR025887 : Glycoside hydrolase family 31, N-terminal domain
GO :
0003824 : Molecular Function : catalytic activity
0004553 : Molecular Function : hydrolase activity, hydrolyzing O-glycosyl compounds
0005975 : Biological Process : carbohydrate metabolic process
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, lyso 10, golg 5, extr_plas 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027175)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : AF171665
Mus
sp. (Mouse) : AK146538
Gallus
sp. (Chicken) : BX932502
Pongo
sp. (Orangutan) : CR860209
Oryzias
sp. (Medaka) : ENSORLT00000011251
Oryzias
sp. (Medaka) : ENSORLT00000012733
Tetraodon
sp. (Tetraodon) : GSTENT00033404001
Takifugu
sp. (Fugu) : SINFRUT00000139505
Takifugu
sp. (Fugu) : SINFRUT00000165456
Macaca
sp. (Macaque) : XM_001109980
Pan
sp. (Chimpanzee) : XM_001160653
Monodelphis
sp. (Opossum) : XM_001380195
Equus
sp. (Horse) : XM_001490320
Danio
sp. (Zebrafish) : XM_001921922
Danio
sp. (Zebrafish) : XM_695567
Canis
sp. (Dog) : XM_845556
HIX0027175
HIT000396903 (
ENST00000390015
)
(Lysosomal alpha-glucosidase; EC=3.2.1.20; Acid maltase; Aglucosidase alfa; Contains: 76 kDa lysosomal alpha-glucosidase; Contains: 70 kDa lysosomal alpha-glucosidase; Precursor;)
genome : 78,075,393 - 78,093,676 (18,284)
query : 1 - 3,549 (3,549/3,549)
21 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.20
KEGG pathway :
00052 : Galactose metabolism (37)
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, lyso 10, golg 5, extr_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027175)
HIX0027175
HIT000261825
(
BC065262
)
(Conserved hypothetical protein.)
genome : 78,075,396 - 78,076,530 (1,135)
query : 1 - 950 (950/1,030)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 11, mito 6, extr 5, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027175)
HIX0027175
HIT000686725 (
ENST00000574376
)
(Hypothetical short protein.)
genome : 78,075,396 - 78,076,532 (1,137)
query : 1 - 952 (952/952)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 11, mito 6, extr 5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027175)
HIX0027175
HIT000116104 (
ENST00000302262
)
(Lysosomal alpha-glucosidase; EC=3.2.1.20; Acid maltase; Aglucosidase alfa; Contains: 76 kDa lysosomal alpha-glucosidase; Contains: 70 kDa lysosomal alpha-glucosidase; Precursor;)
genome : 78,075,503 - 78,093,678 (18,176)
query : 1 - 3,626 (3,626/3,626)
20 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.20
KEGG pathway :
00052 : Galactose metabolism (37)
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, lyso 10, golg 5, extr_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027175)
HIX0027175
HIT000325330
(
Y00839
)
(Lysosomal alpha-glucosidase; EC=3.2.1.20; Acid maltase; Aglucosidase alfa; Contains: 76 kDa lysosomal alpha-glucosidase; Contains: 70 kDa lysosomal alpha-glucosidase; Precursor;)
genome : 78,075,503 - 78,093,678 (18,176)
query : 1 - 3,624 (3,624/3,624)
20 exons
identity = 0.997
5'(0.989;0.998;0.986;1.000;1.000;1.000;1.000;
0.992;1.000;1.000;0.988;1.000;1.000;1.000;
1.000;1.000;0.993;0.994;1.000;0.995)3'
coverage = 1.000
EC number :
EC 3.2.1.3
,
EC 3.2.1.20
KEGG pathway :
00052 : Galactose metabolism (37)
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
InterPro :
IPR000322 : Glycoside hydrolase family 31
IPR000519 : P-type trefoil
IPR011013 : Galactose mutarotase-like domain
IPR017853 : Glycoside hydrolase superfamily
IPR017957 : P-type trefoil, conserved site
IPR025887 : Glycoside hydrolase family 31, N-terminal domain
GO :
0003824 : Molecular Function : catalytic activity
0004553 : Molecular Function : hydrolase activity, hydrolyzing O-glycosyl compounds
0005975 : Biological Process : carbohydrate metabolic process
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
lyso 10, extr 9, golg 5, E.R. 4, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027175)
HIX0027175
HIT000195585
(
M34424
)
(Lysosomal alpha-glucosidase; EC=3.2.1.20; Acid maltase; Aglucosidase alfa; Contains: 76 kDa lysosomal alpha-glucosidase; Contains: 70 kDa lysosomal alpha-glucosidase; Precursor;)
genome : 78,078,354 - 78,093,679 (15,326)
query : 1 - 3,439 (3,439/3,441)
19 exons
identity = 0.999
5'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.993;1.000;1.000;0.998)3'
coverage = 0.999
EC number :
EC 3.2.1.20
KEGG pathway :
00052 : Galactose metabolism (37)
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
InterPro :
IPR000322 : Glycoside hydrolase family 31
IPR000519 : P-type trefoil
IPR011013 : Galactose mutarotase-like domain
IPR017853 : Glycoside hydrolase superfamily
IPR017957 : P-type trefoil, conserved site
IPR025887 : Glycoside hydrolase family 31, N-terminal domain
GO :
0003824 : Molecular Function : catalytic activity
0004553 : Molecular Function : hydrolase activity, hydrolyzing O-glycosyl compounds
0005975 : Biological Process : carbohydrate metabolic process
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
lyso 10, extr 9, golg 5, E.R. 4, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027175)
HIX0027175
HIT000393995
(
DQ907243
)
(Lysosomal alpha-glucosidase; EC=3.2.1.20; Acid maltase; Aglucosidase alfa; Contains: 76 kDa lysosomal alpha-glucosidase; Contains: 70 kDa lysosomal alpha-glucosidase; Precursor;)
genome : 78,078,386 - 78,093,130 (14,745)
query : 1 - 2,859 (2,859/2,859)
19 exons
identity = 0.997
5'(0.998;0.986;1.000;1.000;1.000;1.000;0.992;
0.991;1.000;0.988;1.000;1.000;1.000;1.000;
1.000;0.993;0.994;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.20
KEGG pathway :
00052 : Galactose metabolism (37)
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
InterPro :
IPR000322 : Glycoside hydrolase family 31
IPR000519 : P-type trefoil
IPR011013 : Galactose mutarotase-like domain
IPR017853 : Glycoside hydrolase superfamily
IPR017957 : P-type trefoil, conserved site
IPR025887 : Glycoside hydrolase family 31, N-terminal domain
GO :
0003824 : Molecular Function : catalytic activity
0004553 : Molecular Function : hydrolase activity, hydrolyzing O-glycosyl compounds
0005975 : Biological Process : carbohydrate metabolic process
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
lyso 10, extr 9, golg 5, E.R. 4, pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027175)
HIX0027175
HIT000387201
(
BC113831
)
(Lysosomal alpha-glucosidase; EC=3.2.1.20; Acid maltase; Aglucosidase alfa; Contains: 76 kDa lysosomal alpha-glucosidase; Contains: 70 kDa lysosomal alpha-glucosidase; Precursor;)
genome : 78,083,797 - 78,086,826 (3,030)
query : 12 - 672 (661/690)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.958
EC number :
EC 3.2.1.20
KEGG pathway :
00052 : Galactose metabolism (37)
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
InterPro :
IPR000322 : Glycoside hydrolase family 31
IPR017853 : Glycoside hydrolase superfamily
GO :
0004553 : Molecular Function : hydrolase activity, hydrolyzing O-glycosyl compounds
0005975 : Biological Process : carbohydrate metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, cyto_mito 11.1667, cyto_nucl 10,
cyto_pero 8.83333, mito 8.5, nucl 4.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027175)
HIX0027175
HIT000684744 (
ENST00000572080
)
(Lysosomal alpha-glucosidase; EC=3.2.1.20; Acid maltase; Aglucosidase alfa; Contains: 76 kDa lysosomal alpha-glucosidase; Contains: 70 kDa lysosomal alpha-glucosidase; Precursor;)
genome : 78,084,801 - 78,090,881 (6,081)
query : 1 - 723 (723/723)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.20
KEGG pathway :
00052 : Galactose metabolism (37)
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11, nucl 9, cyto 8.5, extr 7,
cyto_pero 6.83333, mito 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027175)
HIX0027175
HIT000685358 (
ENST00000572803
)
(Lysosomal alpha-glucosidase; EC=3.2.1.20; Acid maltase; Precursor;)
genome : 78,085,532 - 78,086,747 (1,216)
query : 1 - 575 (575/575)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.20
KEGG pathway :
00052 : Galactose metabolism (37)
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 15.5, cyto 11, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027175)
HIX0027175
HIT000683567 (
ENST00000570716
)
(Lysosomal alpha-glucosidase; EC=3.2.1.20; Acid maltase; Aglucosidase alfa; Contains: 76 kDa lysosomal alpha-glucosidase; Contains: 70 kDa lysosomal alpha-glucosidase; Precursor;)
genome : 78,086,183 - 78,087,070 (888)
query : 1 - 534 (534/534)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.20
KEGG pathway :
00052 : Galactose metabolism (37)
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, extr 10, mito_nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027175)
HIX0027175
HIT000216696
(
S76893
)
(Lysosomal alpha-glucosidase; EC=3.2.1.20; Acid maltase; Aglucosidase alfa; Contains: 76 kDa lysosomal alpha-glucosidase; Contains: 70 kDa lysosomal alpha-glucosidase; Precursor;)
genome : 78,086,675 - 78,086,826 (152)
query : 1 - 152 (152/152)
1 exon
identity = 0.993
5'(0.993)3'
coverage = 1.000
EC number :
EC 3.2.1.20
KEGG pathway :
00052 : Galactose metabolism (37)
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
InterPro :
IPR000322 : Glycoside hydrolase family 31
IPR017853 : Glycoside hydrolase superfamily
GO :
0004553 : Molecular Function : hydrolase activity, hydrolyzing O-glycosyl compounds
0005975 : Biological Process : carbohydrate metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027175)
HIX0027175
HIT000686013 (
ENST00000573556
)
(Lysosomal alpha-glucosidase; EC=3.2.1.20; Acid maltase; Aglucosidase alfa; Contains: 76 kDa lysosomal alpha-glucosidase; Contains: 70 kDa lysosomal alpha-glucosidase; Precursor;)
genome : 78,090,625 - 78,092,605 (1,981)
query : 1 - 753 (753/756)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.996
EC number :
EC 3.2.1.20
KEGG pathway :
00052 : Galactose metabolism (37)
00500 : Starch and sucrose metabolism (71)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15.5, cyto 8.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027175)
HIX0027175
HIT000088856
(
BC015908
)
(Conserved hypothetical protein.)
genome : 78,093,399 - 78,093,679 (281)
query : 1 - 281 (281/350)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto 9.5, mito 6, cyto_pero 6, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027175)
HIX0014226
HIT000006187
(
AK022913
)
Representative transcript
(Ubiquitin carboxyl-terminal hydrolase 36.)
genome : 76,783,470 - 76,836,887 (53,418)
query : 1 - 3,758 (3,758/3,760)
22 exons
identity = 0.996
3'(0.996;1.000;1.000;1.000;0.972;0.993;1.000;
1.000;1.000;1.000;1.000;1.000;0.991;1.000;
1.000;1.000;0.990;1.000;1.000;0.996;1.000;
1.000)5'
coverage = 0.999
EC number :
EC 3.4.19.12
InterPro :
IPR001394 : Peptidase C19, ubiquitin carboxyl-terminal hydrolase
IPR018200 : Ubiquitin specific protease, conserved site
IPR028889 : Ubiquitin specific protease domain
GO :
0006511 : Biological Process : ubiquitin-dependent protein catabolic process
0036459 : Molecular Function : ubiquitinyl hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 16, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014226)
HIX0014226
HIT000001168
(
AB040886
)
(Ubiquitin carboxyl-terminal hydrolase 36; EC=3.4.19.12; Deubiquitinating enzyme 36; Ubiquitin thioesterase 36; Ubiquitin-specific-processing protease 36;)
genome : 76,783,549 - 76,836,862 (53,314)
query : 1 - 5,879 (5,879/5,879)
21 exons
identity = 0.997
3'(0.995;0.998;1.000;1.000;0.972;0.995;1.000;
1.000;1.000;1.000;1.000;0.991;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto_nucl 17, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014226)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK028572
Danio
sp. (Zebrafish) : BC098528
Bos
sp. (Cow) : ENSBTAT00000042588
Equus
sp. (Horse) : ENSECAT00000017188
Oryzias
sp. (Medaka) : ENSORLT00000009720
Pongo
sp. (Orangutan) : ENSPPYT00000010150
Tetraodon
sp. (Tetraodon) : GSTENT00018577001
Takifugu
sp. (Fugu) : SINFRUT00000137598
Rattus
sp. (Rat) : XM_001081749
Macaca
sp. (Macaque) : XM_001108648
Pan
sp. (Chimpanzee) : XM_001146571
Monodelphis
sp. (Opossum) : XM_001371065
Gallus
sp. (Chicken) : XM_424101
Canis
sp. (Dog) : XM_540463
HIX0014226
HIT000701064 (
ENST00000589225
)
(Ubiquitin carboxyl-terminal hydrolase 36; EC=3.4.19.12; Deubiquitinating enzyme 36; Ubiquitin thioesterase 36; Ubiquitin-specific-processing protease 36;)
genome : 76,783,549 - 76,836,862 (53,314)
query : 1 - 5,885 (5,885/5,885)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto_nucl 17, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014226)
HIX0014226
HIT000384285
(
AK225155
)
(Ubiquitin carboxyl-terminal hydrolase 36.)
genome : 76,791,734 - 76,836,887 (45,154)
query : 1 - 3,359 (3,359/3,389)
15 exons
identity = 0.968
3'(0.949;0.623;1.000;1.000;0.972;0.994;1.000;
0.999;1.000;1.000;0.815;1.000;0.996;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.4.19.12
InterPro :
IPR001394 : Peptidase C19, ubiquitin carboxyl-terminal hydrolase
IPR018200 : Ubiquitin specific protease, conserved site
GO :
0006511 : Biological Process : ubiquitin-dependent protein catabolic process
0036459 : Molecular Function : ubiquitinyl hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, extr 5, nucl 5, mito 5, mito_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014226)
HIX0014226
HIT000028708
(
AL833835
)
(Ubiquitin carboxyl-terminal hydrolase 36.)
genome : 76,792,970 - 76,803,646 (10,677)
query : 1 - 3,423 (3,423/3,462)
7 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 17.3333, cyto 5.5, cyto_golg 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014226)
HIX0014226
HIT000119243 (
ENST00000312010
)
(Ubiquitin carboxyl-terminal hydrolase 36; EC=3.4.19.12; Deubiquitinating enzyme 36; Ubiquitin thioesterase 36; Ubiquitin-specific-processing protease 36;)
genome : 76,792,965 - 76,836,969 (44,005)
query : 1 - 5,234 (5,234/5,234)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto_nucl 17, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014226)
HIX0014226
HIT000209715 (
NM_025090
)
(Ubiquitin carboxyl-terminal hydrolase 36; EC=3.4.19.12; Deubiquitinating enzyme 36; Ubiquitin thioesterase 36; Ubiquitin-specific-processing protease 36;)
genome : 76,792,965 - 76,836,969 (44,005)
query : 1 - 5,234 (5,234/5,234)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto_nucl 17, cyto 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014226)
HIX0014226
HIT000006114
(
AK022840
)
(Ubiquitin carboxyl-terminal hydrolase 36.)
genome : 76,792,969 - 76,819,331 (26,363)
query : 1 - 4,650 (4,650/4,650)
16 exons
identity = 0.996
3'(0.994;1.000;1.000;1.000;0.972;1.000;0.942;
1.000;1.000;1.000;1.000;1.000;0.991;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.19.12
InterPro :
IPR001394 : Peptidase C19, ubiquitin carboxyl-terminal hydrolase
IPR018200 : Ubiquitin specific protease, conserved site
IPR028889 : Ubiquitin specific protease domain
GO :
0006511 : Biological Process : ubiquitin-dependent protein catabolic process
0036459 : Molecular Function : ubiquitinyl hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, mito 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014226)
HIX0014226
HIT000547872 (
ENST00000449938
)
(Ubiquitin carboxyl-terminal hydrolase 36.)
genome : 76,792,969 - 76,819,331 (26,363)
query : 1 - 4,656 (4,656/4,656)
16 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.942;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, mito 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014226)
HIX0014226
HIT000264411
(
BC071582
)
(Ubiquitin carboxyl-terminal hydrolase 36; EC=3.4.19.12; Deubiquitinating enzyme 36; Ubiquitin thioesterase 36; Ubiquitin-specific-processing protease 36;)
genome : 76,793,150 - 76,836,609 (43,460)
query : 1 - 4,505 (4,505/4,520)
21 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.996;1.000;0.992)5'
coverage = 1.000
EC number :
EC 3.4.19.12
InterPro :
IPR001394 : Peptidase C19, ubiquitin carboxyl-terminal hydrolase
IPR018200 : Ubiquitin specific protease, conserved site
IPR028889 : Ubiquitin specific protease domain
GO :
0006511 : Biological Process : ubiquitin-dependent protein catabolic process
0036459 : Molecular Function : ubiquitinyl hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto_nucl 17, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014226)
HIX0014226
HIT000641847 (
ENST00000542802
)
(Ubiquitin carboxyl-terminal hydrolase 36; EC=3.4.19.12; Deubiquitinating enzyme 36; Ubiquitin thioesterase 36; Ubiquitin-specific-processing protease 36;)
genome : 76,793,151 - 76,836,752 (43,602)
query : 1 - 4,647 (4,647/4,647)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto_nucl 17, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014226)
HIX0014226
HIT000089000
(
BC016487
)
(Ubiquitin carboxyl-terminal hydrolase 36.)
genome : 76,798,553 - 76,836,946 (38,394)
query : 1 - 3,177 (3,177/3,191)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.986;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.19.12
InterPro :
IPR001394 : Peptidase C19, ubiquitin carboxyl-terminal hydrolase
IPR018200 : Ubiquitin specific protease, conserved site
IPR028889 : Ubiquitin specific protease domain
GO :
0006511 : Biological Process : ubiquitin-dependent protein catabolic process
0036459 : Molecular Function : ubiquitinyl hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto_nucl 17, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014226)
HIX0014226
HIT000384556
(
AK225426
)
(Ubiquitin carboxyl-terminal hydrolase 36.)
genome : 76,798,559 - 76,836,844 (38,286)
query : 1 - 3,069 (3,069/3,086)
17 exons
identity = 0.998
3'(1.000;0.995;1.000;0.999;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.991;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.19.12
InterPro :
IPR001394 : Peptidase C19, ubiquitin carboxyl-terminal hydrolase
IPR018200 : Ubiquitin specific protease, conserved site
IPR028889 : Ubiquitin specific protease domain
GO :
0006511 : Biological Process : ubiquitin-dependent protein catabolic process
0036459 : Molecular Function : ubiquitinyl hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto_nucl 17, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014226)
HIX0014226
HIT000699927 (
ENST00000588086
)
(Ubiquitin carboxyl-terminal hydrolase 36.)
genome : 76,798,543 - 76,836,946 (38,404)
query : 1 - 3,187 (3,187/3,187)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto_nucl 17, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014226)
HIX0014226
HIT000091434
(
BC027992
)
(Ubiquitin carboxyl-terminal hydrolase 36.)
genome : 76,798,565 - 76,836,873 (38,309)
query : 11 - 3,102 (3,092/3,116)
17 exons
identity = 0.999
3'(1.000;0.995;1.000;1.000;1.000;1.000;1.000;
0.991;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.997
EC number :
EC 3.4.19.12
InterPro :
IPR001394 : Peptidase C19, ubiquitin carboxyl-terminal hydrolase
IPR018200 : Ubiquitin specific protease, conserved site
IPR028889 : Ubiquitin specific protease domain
GO :
0006511 : Biological Process : ubiquitin-dependent protein catabolic process
0036459 : Molecular Function : ubiquitinyl hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto_nucl 17, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014226)
HIX0014226
HIT000004145
(
AK001671
)
(Ubiquitin carboxyl-terminal hydrolase 36.)
genome : 76,798,566 - 76,836,980 (38,415)
query : 1 - 3,198 (3,198/3,198)
17 exons
identity = 0.998
3'(1.000;0.995;1.000;0.999;1.000;1.000;1.000;
0.991;1.000;1.000;1.000;0.990;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto_nucl 17, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014226)
HIX0014226
HIT000250886
(
AY169386
)
(Ubiquitin carboxyl-terminal hydrolase 36.)
genome : 76,803,496 - 76,832,445 (28,950)
query : 1 - 1,630 (1,630/1,647)
12 exons
identity = 0.998
3'(0.996;1.000;1.000;1.000;0.991;1.000;1.000;
1.000;0.990;1.000;1.000;0.996)5'
coverage = 0.990
EC number :
EC 3.4.19.12
InterPro :
IPR001394 : Peptidase C19, ubiquitin carboxyl-terminal hydrolase
IPR018200 : Ubiquitin specific protease, conserved site
IPR028889 : Ubiquitin specific protease domain
GO :
0006511 : Biological Process : ubiquitin-dependent protein catabolic process
0036459 : Molecular Function : ubiquitinyl hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 16, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014226)
HIX0014226
HIT000697920 (
ENST00000586066
)
(Ubiquitin carboxyl-terminal hydrolase 36.)
genome : 76,808,942 - 76,823,425 (14,484)
query : 1 - 888 (888/888)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, cyto_nucl 10, extr 6, nucl 6, mito 5, pero 3,
extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014226)
HIX0014226
HIT000701851 (
ENST00000590014
)
(Ubiquitin carboxyl-terminal hydrolase 36.)
genome : 76,814,823 - 76,825,046 (10,224)
query : 1 - 502 (502/502)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto_nucl 6.5, cyto 6, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014226)
HIX0014226
HIT000701263 (
ENST00000589424
)
(Ubiquitin carboxyl-terminal hydrolase 36.)
genome : 76,819,204 - 76,836,863 (17,660)
query : 1 - 970 (970/970)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.19.12
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 6, nucl 5, mito 5, mito_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014226)
HIX0014228
HIT000200099 (
NM_003255
)
(Metalloproteinase inhibitor 2; CSC-21K; Tissue inhibitor of metalloproteinases 2; TIMP-2; Precursor;)
genome : 76,849,060 - 76,921,472 (72,413)
query : 1 - 3,654 (3,654/3,670)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto_mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014228)
HIX0014228
HIT000264415
(
BC071586
)
Representative transcript
(Metalloproteinase inhibitor 2; CSC-21K; Tissue inhibitor of metalloproteinases 2; TIMP-2; Precursor;)
genome : 76,849,060 - 76,921,469 (72,410)
query : 1 - 3,648 (3,648/3,661)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;0.998)5'
coverage = 1.000
InterPro :
IPR001134 : Netrin domain
IPR001820 : Proteinase inhibitor I35, tissue inhibitor of metalloproteinase
IPR008993 : Tissue inhibitor of metalloproteinases-like, OB-fold
IPR015613 : Tissue inhibitor of metalloprotease 2
IPR027465 : Proteinase inhibitor I35, tissue inhibitor of metalloproteinase, C-terminal domain
GO :
0005515 : Molecular Function : protein binding
0008191 : Molecular Function : metalloendopeptidase inhibitor activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto_mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014228)
Ortholog candidate ( ->
Evola
)
Takifugu
sp. (Fugu) : AB154540
Takifugu
sp. (Fugu) : AB161713
Oryzias
sp. (Medaka) : AB185849
Oryzias
sp. (Medaka) : AB193468
Canis
sp. (Dog) : AF188489
Rattus
sp. (Rat) : AJ409332
Mus
sp. (Mouse) : AK081522
Danio
sp. (Zebrafish) : BC068388
Bos
sp. (Cow) : BC102710
Danio
sp. (Zebrafish) : BC125891
Tetraodon
sp. (Tetraodon) : CR664537
Tetraodon
sp. (Tetraodon) : CR692222
Pongo
sp. (Orangutan) : ENSPPYT00000010152
Pan
sp. (Chimpanzee) : ENSPTRT00000017842
Monodelphis
sp. (Opossum) : XM_001380332
HIX0014228
HIT000108567 (
ENST00000262768
)
(Metalloproteinase inhibitor 2; CSC-21K; Tissue inhibitor of metalloproteinases 2; TIMP-2; Precursor;)
genome : 76,849,059 - 76,921,469 (72,411)
query : 1 - 3,652 (3,652/3,652)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto_mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014228)
HIX0014228
HIT000635234 (
ENST00000536189
)
(Metalloproteinase inhibitor 2; CSC-21K; Tissue inhibitor of metalloproteinases 2; TIMP-2; Precursor;)
genome : 76,849,059 - 76,918,483 (69,425)
query : 1 - 3,415 (3,415/3,415)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 12, extr 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014228)
HIX0014228
HIT000488914
(
AK294290
)
(Metalloproteinase inhibitor 2; CSC-21K; Tissue inhibitor of metalloproteinases 2; TIMP-2; Precursor;)
genome : 76,851,334 - 76,918,483 (67,150)
query : 1 - 1,140 (1,140/1,140)
5 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001134 : Netrin domain
IPR001820 : Proteinase inhibitor I35, tissue inhibitor of metalloproteinase
IPR008993 : Tissue inhibitor of metalloproteinases-like, OB-fold
IPR015613 : Tissue inhibitor of metalloprotease 2
IPR027465 : Proteinase inhibitor I35, tissue inhibitor of metalloproteinase, C-terminal domain
GO :
0005515 : Molecular Function : protein binding
0008191 : Molecular Function : metalloendopeptidase inhibitor activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 12, extr 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014228)
HIX0014228
HIT000053813
(
BC052605
)
(Metalloproteinase inhibitor 2; CSC-21K; Tissue inhibitor of metalloproteinases 2; TIMP-2; Precursor;)
genome : 76,851,634 - 76,921,449 (69,816)
query : 1 - 1,057 (1,057/1,083)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR001134 : Netrin domain
IPR001820 : Proteinase inhibitor I35, tissue inhibitor of metalloproteinase
IPR008993 : Tissue inhibitor of metalloproteinases-like, OB-fold
IPR015613 : Tissue inhibitor of metalloprotease 2
IPR027465 : Proteinase inhibitor I35, tissue inhibitor of metalloproteinase, C-terminal domain
GO :
0005515 : Molecular Function : protein binding
0008191 : Molecular Function : metalloendopeptidase inhibitor activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto_mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014228)
HIX0014228
HIT000191343
(
J05593
)
(Metalloproteinase inhibitor 2; CSC-21K; Tissue inhibitor of metalloproteinases 2; TIMP-2; Precursor;)
genome : 76,851,620 - 76,921,442 (69,823)
query : 3 - 1,062 (1,060/1,062)
5 exons
identity = 0.995
3'(1.000;1.000;1.000;1.000;0.988)5'
coverage = 0.998
InterPro :
IPR001134 : Netrin domain
IPR001820 : Proteinase inhibitor I35, tissue inhibitor of metalloproteinase
IPR008993 : Tissue inhibitor of metalloproteinases-like, OB-fold
IPR015613 : Tissue inhibitor of metalloprotease 2
IPR027465 : Proteinase inhibitor I35, tissue inhibitor of metalloproteinase, C-terminal domain
GO :
0005515 : Molecular Function : protein binding
0008191 : Molecular Function : metalloendopeptidase inhibitor activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto_mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014228)
HIX0014228
HIT000215653
(
S48568
)
(Metalloproteinase inhibitor 2; CSC-21K; Tissue inhibitor of metalloproteinases 2; TIMP-2; Precursor;)
genome : 76,851,620 - 76,921,442 (69,823)
query : 3 - 1,062 (1,060/1,062)
5 exons
identity = 0.995
3'(1.000;1.000;1.000;1.000;0.988)5'
coverage = 0.998
InterPro :
IPR001134 : Netrin domain
IPR001820 : Proteinase inhibitor I35, tissue inhibitor of metalloproteinase
IPR008993 : Tissue inhibitor of metalloproteinases-like, OB-fold
IPR015613 : Tissue inhibitor of metalloprotease 2
IPR027465 : Proteinase inhibitor I35, tissue inhibitor of metalloproteinase, C-terminal domain
GO :
0005515 : Molecular Function : protein binding
0008191 : Molecular Function : metalloendopeptidase inhibitor activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto_mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014228)
HIX0014228
HIT000195464
(
M32304
)
(Metalloproteinase inhibitor 2; CSC-21K; Tissue inhibitor of metalloproteinases 2; TIMP-2; Precursor;)
genome : 76,851,639 - 76,921,416 (69,778)
query : 9 - 1,027 (1,019/1,035)
5 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.997)5'
coverage = 0.985
InterPro :
IPR001134 : Netrin domain
IPR001820 : Proteinase inhibitor I35, tissue inhibitor of metalloproteinase
IPR008993 : Tissue inhibitor of metalloproteinases-like, OB-fold
IPR015613 : Tissue inhibitor of metalloprotease 2
IPR027465 : Proteinase inhibitor I35, tissue inhibitor of metalloproteinase, C-terminal domain
GO :
0005515 : Molecular Function : protein binding
0008191 : Molecular Function : metalloendopeptidase inhibitor activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto_mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014228)
HIX0014228
HIT000321909
(
X54533
)
(Metalloproteinase inhibitor 2; CSC-21K; Tissue inhibitor of metalloproteinases 2; TIMP-2; Precursor;)
genome : 76,851,771 - 76,921,083 (69,313)
query : 1 - 554 (554/555)
5 exons
identity = 0.987
3'(0.989;1.000;0.982;1.000;0.930)5'
coverage = 0.998
InterPro :
IPR001134 : Netrin domain
IPR001820 : Proteinase inhibitor I35, tissue inhibitor of metalloproteinase
IPR008993 : Tissue inhibitor of metalloproteinases-like, OB-fold
IPR015613 : Tissue inhibitor of metalloprotease 2
IPR027465 : Proteinase inhibitor I35, tissue inhibitor of metalloproteinase, C-terminal domain
GO :
0005515 : Molecular Function : protein binding
0008191 : Molecular Function : metalloendopeptidase inhibitor activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 11, extr 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014228)
HIX0014228
HIT000698559 (
ENST00000586713
)
(Metalloproteinase inhibitor 2; CSC-21K; Tissue inhibitor of metalloproteinases 2; TIMP-2; Precursor;)
genome : 76,866,992 - 76,899,297 (32,306)
query : 1 - 711 (711/711)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, extr 10, cyto 5, extr_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014228)
HIX0014235
HIT000207549 (
NM_019020
)
(Rab-GTPase-TBC domain containing protein.)
genome : 77,906,142 - 78,009,657 (103,516)
query : 1 - 10,946 (10,946/10,956)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 13, mito 6, cyto 5, E.R._mito 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014235)
HIX0014235
HIT000725084 (
NM_001271844
)
(Rab-GTPase-TBC domain containing protein.)
genome : 77,906,142 - 77,924,656 (18,515)
query : 1 - 9,791 (9,791/9,801)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 12.5, mito 10, cyto_nucl 10, cyto 6.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014235)
HIX0014235
HIT000725085 (
NM_001271845
)
(Rab-GTPase-TBC domain containing protein.)
genome : 77,906,142 - 77,924,656 (18,515)
query : 1 - 9,830 (9,830/9,840)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 9.5, mito 8, cyto 6.5, plas 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014235)
HIX0014235
HIT000118868 (
ENST00000310924
)
(Rab-GTPase-TBC domain containing protein.)
genome : 77,906,142 - 78,009,647 (103,506)
query : 1 - 10,936 (10,936/10,936)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 13, mito 6, cyto 5, E.R._mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014235)
HIX0014235
HIT000026484
(
AL512709
)
(Conserved hypothetical protein.)
genome : 77,907,360 - 77,912,301 (4,942)
query : 31 - 4,968 (4,938/4,983)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, nucl 2, mito 2, mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014235)
HIX0014235
HIT000026119
(
AL157485
)
(Conserved hypothetical protein.)
genome : 77,909,427 - 77,912,642 (3,216)
query : 1 - 3,267 (3,267/3,291)
1 exon
identity = 0.980
3'(0.980)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito 7, nucl 5.5, cyto_nucl 5, cyto 3.5,
E.R._mito 3.5, mito_pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014235)
HIX0014235
HIT000003230
(
AK000755
)
(Conserved hypothetical protein.)
genome : 77,909,430 - 77,911,859 (2,430)
query : 1 - 2,432 (2,432/2,432)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014235)
HIX0014235
HIT000265839
(
BC080571
)
(Conserved hypothetical protein.)
genome : 77,909,587 - 77,911,870 (2,284)
query : 1 - 2,290 (2,290/2,316)
1 exon
identity = 0.994
3'(0.994)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 6, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014235)
HIX0014235
HIT000306943
(
CR936670
)
Representative transcript
(TBC1 domain family member 16 isoform b.)
genome : 77,909,592 - 77,924,656 (15,065)
query : 6 - 6,396 (6,391/6,415)
8 exons
identity = 0.989
3'(0.987;1.000;1.000;0.995;1.000;1.000;1.000;
0.990)5'
coverage = 0.999
InterPro :
IPR000195 : Rab-GTPase-TBC domain
GO :
0005097 : Molecular Function : Rab GTPase activator activity
0032313 : Biological Process : regulation of Rab GTPase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 12.5, mito 10, cyto_nucl 10, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014235)
HIX0014235
HIT000688779 (
ENST00000576768
)
(Rab-GTPase-TBC domain containing protein.)
genome : 77,909,591 - 77,924,656 (15,066)
query : 1 - 6,342 (6,342/6,342)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 12.5, mito 10, cyto_nucl 10, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014235)
HIX0014235
HIT000051853
(
BC036947
)
(TBC1 domain family member 16 isoform c.)
genome : 77,911,707 - 77,924,635 (12,929)
query : 27 - 4,270 (4,244/4,302)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.994
InterPro :
IPR000195 : Rab-GTPase-TBC domain
GO :
0005097 : Molecular Function : Rab GTPase activator activity
0032313 : Biological Process : regulation of Rab GTPase activity
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 9.5, mito 8, cyto 6.5, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014235)
HIX0014235
HIT000133478 (
ENST00000340848
)
(Rab-GTPase-TBC domain containing protein.)
genome : 77,911,707 - 77,924,635 (12,929)
query : 1 - 4,244 (4,244/4,244)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 9.5, mito 8, cyto 6.5, plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014235)
HIX0014236
HIT000206806 (
NM_017950
)
(Coiled-coil domain-containing protein 40;)
genome : 78,010,431 - 78,074,411 (63,981)
query : 1 - 4,297 (4,297/4,311)
20 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15.1667, cyto 11.5,
cyto_mito 6.66667, cyto_golg 6.66667
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014236)
HIX0014236
HIT000722915 (
NM_001243342
)
(Coiled-coil domain-containing protein 40;)
genome : 78,010,431 - 78,064,619 (54,189)
query : 1 - 3,545 (3,545/3,562)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.1667, cyto 10.5,
cyto_mito 6.16667, cyto_golg 6.16667
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014236)
HIX0014236
HIT000480821 (
ENST00000397545
)
(Coiled-coil domain-containing protein 40;)
genome : 78,010,435 - 78,074,412 (63,978)
query : 1 - 4,294 (4,294/4,294)
20 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15.1667, cyto 11.5,
cyto_mito 6.66667, cyto_golg 6.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014236)
HIX0014236
HIT000356157 (
ENST00000374877
)
(Coiled-coil domain-containing protein 40;)
genome : 78,010,435 - 78,064,198 (53,764)
query : 1 - 3,120 (3,120/3,120)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.1667, cyto 10.5,
cyto_mito 6.16667, cyto_golg 6.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014236)
HIX0014236
HIT000093796
(
BC035251
)
Representative transcript
(Coiled-coil domain-containing protein 40 isoform 2.)
genome : 78,010,442 - 78,064,617 (54,176)
query : 5 - 3,476 (3,472/3,493)
19 exons
identity = 0.995
5'(1.000;1.000;0.998;1.000;1.000;1.000;0.995;
1.000;1.000;1.000;0.996;0.995;1.000;0.995;
1.000;1.000;1.000;0.965;0.989)3'
coverage = 0.998
InterPro :
IPR013956 : E3 ubiquitin ligase, BRE1
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.1667, cyto 10.5,
cyto_mito 6.16667, cyto_golg 6.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014236)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB168566
Mus
sp. (Mouse) : BC072591
Gallus
sp. (Chicken) : BX931251
Oryzias
sp. (Medaka) : ENSORLT00000002366
Pongo
sp. (Orangutan) : ENSPPYT00000010167
Rattus
sp. (Rat) : XM_001081764
Monodelphis
sp. (Opossum) : XM_001380200
Equus
sp. (Horse) : XM_001490355
Pan
sp. (Chimpanzee) : XM_511721
Canis
sp. (Dog) : XM_540470
Bos
sp. (Cow) : XM_608246
HIX0014236
HIT000003235
(
AK000760
)
(Coiled-coil domain-containing protein 40;)
genome : 78,010,451 - 78,041,700 (31,250)
query : 1 - 1,970 (1,970/1,970)
11 exons
identity = 0.997
5'(1.000;1.000;0.993;1.000;1.000;1.000;1.000;
0.994;1.000;1.000;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto_nucl 15.5, cyto 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014236)
HIX0014236
HIT000110426 (
ENST00000269318
)
(Coiled-coil domain-containing protein 40;)
genome : 78,010,451 - 78,041,700 (31,250)
query : 1 - 1,970 (1,970/1,970)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto_nucl 15.5, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014236)
HIX0014236
HIT000259844
(
BC058288
)
(Coiled-coil domain-containing protein 40;)
genome : 78,010,457 - 78,040,569 (30,113)
query : 5 - 2,014 (2,010/2,050)
9 exons
identity = 0.999
5'(1.000;1.000;0.998;1.000;1.000;0.988;1.000;
1.000;1.000)3'
coverage = 0.980
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014236)
HIX0014236
HIT000356156 (
ENST00000374876
)
(Coiled-coil domain-containing protein 40;)
genome : 78,010,457 - 78,040,569 (30,113)
query : 1 - 2,010 (2,010/2,010)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014236)
HIX0014236
HIT000685943 (
ENST00000573474
)
(Conserved hypothetical protein.)
genome : 78,013,804 - 78,024,023 (10,220)
query : 1 - 554 (554/554)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 13, cyto 10, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014236)
HIX0224097
pHIT000090694 ( pHIT000090694 )
(Conserved hypothetical protein.)
genome : 76,794,502 - 76,848,586 (54,085)
query : 1 - 2,877 (2,877/2,877)
18 exons
InterPro :
IPR001394 : Peptidase C19, ubiquitin carboxyl-terminal hydrolase
IPR018200 : Ubiquitin specific protease, conserved site
IPR028889 : Ubiquitin specific protease domain
GO :
0006511 : Biological Process : ubiquitin-dependent protein catabolic process
0036459 : Molecular Function : ubiquitinyl hydrolase activity
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224097)
CAGE tag :
H05BB48L1201,H05BF20F1108,H06BA08K1209
H06BA43D1203,H10BA96E0803
HIX0224097
pHIT000090867 ( pHIT000090867 )
(Conserved hypothetical protein.)
genome : 76,794,502 - 76,848,586 (54,085)
query : 1 - 2,805 (2,805/2,805)
18 exons
InterPro :
IPR001394 : Peptidase C19, ubiquitin carboxyl-terminal hydrolase
IPR018200 : Ubiquitin specific protease, conserved site
IPR028889 : Ubiquitin specific protease domain
GO :
0006511 : Biological Process : ubiquitin-dependent protein catabolic process
0036459 : Molecular Function : ubiquitinyl hydrolase activity
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224097)
CAGE tag :
H05BA07P2109,H09BA12F1605,H09BA90G2109
H27BB79J1904,H27BD47G1910
HIX0224097
pHIT000091614 ( pHIT000091614 )
(Conserved hypothetical protein.)
genome : 76,794,502 - 76,848,586 (54,085)
query : 1 - 3,108 (3,108/3,108)
20 exons
InterPro :
IPR001394 : Peptidase C19, ubiquitin carboxyl-terminal hydrolase
IPR018200 : Ubiquitin specific protease, conserved site
IPR028889 : Ubiquitin specific protease domain
GO :
0006511 : Biological Process : ubiquitin-dependent protein catabolic process
0036459 : Molecular Function : ubiquitinyl hydrolase activity
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224097)
CAGE tag :
H04BA01K0304,H04BA26B1901,H04BA43A0304
H04BA69I1404,H04BB13C0403
HIX0195481
pHIT000030384 ( pHIT000030384 )
Representative transcript
(Hypothetical protein.)
genome : 76,836,050 - 76,836,971 (922)
query : 1 - 813 (813/813)
2 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0195481)
CAGE tag :
H04BA53E2407,H04BA63N0608,H04BA67O1202
H05BA47C1103,H05BC81F0306
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : XM_001106535
Pan
sp. (Chimpanzee) : XM_001146634
HIX0195005
pHIT000117803 ( pHIT000117803 )
Representative transcript
(Hypothetical protein.)
genome : 77,019,987 - 77,020,493 (507)
query : 1 - 507 (507/507)
1 exon
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0195005)
CAGE tag :
T17R04723A45
HIX0202426
pHIT000117799 ( pHIT000117799 )
(Cytosolic endo-beta-N-acetylglucosaminidase; ENGase; EC=3.2.1.96;)
genome : 77,068,861 - 77,087,557 (18,697)
query : 1 - 2,307 (2,307/2,307)
18 exons
EC number :
EC 3.2.1.96
KEGG pathway :
00511 : Other glycan degradation (9)
InterPro :
IPR001357 : BRCT domain
IPR005201 : Glycoside hydrolase, family 85
GO :
0005737 : Cellular Component : cytoplasm
0033925 : Molecular Function : mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202426)
CAGE tag :
T17F0471439C
HIX0195536
pHIT000117807 ( pHIT000117807 )
Representative transcript
(Hypothetical short protein.)
genome : 77,358,816 - 77,376,518 (17,703)
query : 1 - 228 (228/228)
2 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0195536)
CAGE tag :
T17F0475CA7F
HIX0195538
pHIT000117813 ( pHIT000117813 )
Representative transcript
(Hypothetical protein.)
genome : 77,763,540 - 77,764,291 (752)
query : 1 - 474 (474/474)
2 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0195538)
CAGE tag :
T17F047CC7ED
HIX0224083
pHIT000117832 ( pHIT000117832 )
(Conserved hypothetical protein.)
genome : 78,010,091 - 78,073,574 (63,484)
query : 1 - 3,438 (3,438/3,438)
20 exons
InterPro :
IPR013956 : E3 ubiquitin ligase, BRE1
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0224083)
CAGE tag :
T17F0481EFB2
HIX0019803
eHIT000007186 ( ESTsASS_17_379 )
(Non-protein coding transcript.)
genome : 76,568,892 - 76,573,482 (4,591)
query : 1 - 561 (561/561)
3 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019803)
ESTs used for assembly :
DC400758,DB449557
HIX0014232
eHIT000008049 ( ESTsASS_17_1242 )
(Non-protein coding transcript.)
genome : 77,751,943 - 77,758,162 (6,220)
query : 1 - 979 (979/979)
6 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0014232)
ESTs used for assembly :
CN367091,CN367085,BE781770,CN367087
AC016182.24
76500001-76605678 F +
NCBI
AC099804.3
76605679-76723331 F +
NCBI
AC022966.13
76723332-76873349 F +
NCBI
AC100788.8
76873350-76998178 F +
NCBI
AC073624.28
76998179-77099293 F -
NCBI
AC021534.19
77099294-77281381 F -
NCBI
AC020689.8
77281382-77412076 F -
NCBI
AC055858.18
77412077-77521754 F -
NCBI
AC142247.2
77521755-77546461 F +
NCBI
50000
77546462-77596461 N
AC027824.17
77596462-77642263 F -
NCBI
AC105337.7
77642264-77766016 F +
NCBI
AC100791.15
77766017-77950888 F +
NCBI
AC116025.21
77950889-78044987 F +
NCBI
AC087741.18
78044988-78100000 F -
NCBI