bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0223088
HIT000497496
(
AK302872
)
genome : 8,996,000 - 9,043,510 (47,511)
query : 2 - 1,967 (1,966/1,967)
18 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.992;
1.000;1.000;1.000;1.000;1.000;0.990)5'
coverage = 0.999
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223088)
HIX0223088
HIT000641378 (
ENST00000542333
)
genome : 8,996,000 - 9,043,510 (47,511)
query : 1 - 1,966 (1,966/1,966)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223088)
HIX0223088
HIT000679055 (
ENST00000566004
)
genome : 9,014,262 - 9,050,237 (35,976)
query : 1 - 559 (559/559)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223088)
HIX0223088
HIT000682176 (
ENST00000569230
)
genome : 9,015,008 - 9,058,371 (43,364)
query : 1 - 569 (569/569)
4 exons
identity = 0.998
3'(0.993;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223088)
HIX0223088
HIT000679314 (
ENST00000566273
)
genome : 9,015,017 - 9,056,469 (41,453)
query : 1 - 577 (577/577)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223088)
HIX0223088
HIT000677250 (
ENST00000564117
)
genome : 9,015,034 - 9,029,713 (14,680)
query : 1 - 479 (479/479)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223088)
HIX0223088
HIT000679269 (
ENST00000566224
)
genome : 9,017,164 - 9,029,615 (12,452)
query : 1 - 503 (503/503)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223088)
HIX0223562
HIT000677604 (
ENST00000564485
)
genome : 9,056,563 - 9,060,847 (4,285)
query : 1 - 427 (427/427)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223562)
HIX0038776
HIT000035556
(
BC011942
)
genome : 9,079,620 - 9,086,465 (6,846)
query : 1 - 470 (470/487)
3 exons
identity = 0.994
5'(0.978;1.000;0.984)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038776)
HIX0223463
HIT000676070 (
ENST00000562893
)
genome : 9,162,411 - 9,166,269 (3,859)
query : 1 - 753 (753/753)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223463)
HIX0026990
HIT000091926
(
BC029878
)
genome : 9,185,181 - 9,186,047 (867)
query : 1 - 867 (867/867)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026990)
HIX0026990
HIT000125217 (
ENST00000327827
)
genome : 9,185,505 - 9,215,497 (29,993)
query : 1 - 5,953 (5,953/5,953)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026990)
HIX0026990
HIT000204535 (
NM_014117
)
genome : 9,185,537 - 9,213,555 (28,019)
query : 1 - 3,979 (3,979/3,996)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.999)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026990)
HIX0026990
HIT000387023
(
BC113570
)
genome : 9,185,637 - 9,210,807 (25,171)
query : 1 - 1,131 (1,131/1,131)
4 exons
identity = 0.999
5'(0.998;1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026990)
HIX0038542
HIT000068231
(
AF090898
)
genome : 9,186,763 - 9,188,421 (1,659)
query : 1 - 1,659 (1,659/1,675)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038542)
HIX0026990
HIT000043139
(
AK123266
)
genome : 9,196,905 - 9,212,933 (16,029)
query : 1 - 2,621 (2,621/2,621)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026990)
HIX0021842
HIT000019206
(
AK094351
)
genome : 9,198,705 - 9,200,618 (1,914)
query : 1 - 1,912 (1,912/1,912)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021842)
HIX0021842
HIT000686647 (
ENST00000574285
)
genome : 9,198,705 - 9,200,618 (1,914)
query : 1 - 1,914 (1,914/1,914)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021842)
HIX0223619
HIT000678714 (
ENST00000565648
)
genome : 9,199,691 - 9,201,031 (1,341)
query : 1 - 731 (731/731)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223619)
HIX0012810
HIT000027562
(
AL832650
)
genome : 9,201,098 - 9,205,958 (4,861)
query : 2 - 4,859 (4,858/4,870)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012810)
HIX0223937
HIT000686926 (
ENST00000574616
)
genome : 9,201,098 - 9,207,038 (5,941)
query : 1 - 5,941 (5,941/5,941)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223937)
HIX0012810
HIT000020690
(
AK095835
)
genome : 9,202,201 - 9,205,756 (3,556)
query : 1 - 3,557 (3,557/3,557)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012810)
HIX0012810
HIT000043435
(
AK123562
)
genome : 9,202,701 - 9,205,763 (3,063)
query : 1 - 3,063 (3,063/3,063)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012810)
HIX0012810
HIT000014265
(
AK057657
)
genome : 9,203,567 - 9,207,037 (3,471)
query : 1 - 3,475 (3,475/3,475)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012810)
HIX0194365
HIT000481761_10 (
ENST00000398581
)
genome : 9,250,217 - 9,250,778 (562)
query : 3 - 564 (562/564)
1 exon
identity = 0.989
3'(0.989)5'
coverage = 0.996
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194365)
HIX0194365
HIT000639484_09 (
ENST00000540439
)
genome : 9,250,219 - 9,250,777 (559)
query : 1 - 558 (558/558)
1 exon
identity = 0.973
3'(0.973)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194365)
HIX0194365
HIT000124907_10 (
ENST00000327274
)
genome : 9,250,219 - 9,250,761 (543)
query : 1 - 543 (543/543)
1 exon
identity = 0.991
3'(0.991)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194365)
HIX0194365
HIT000504660_01 (
ENST00000403916
)
genome : 9,250,219 - 9,250,761 (543)
query : 1 - 543 (543/543)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194365)
HIX0194365
HIT000635602_08 (
ENST00000536557
)
genome : 9,250,219 - 9,250,761 (543)
query : 1 - 542 (542/542)
1 exon
identity = 0.991
3'(0.991)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194365)
HIX0194365
HIT000587638_09 (
ENST00000483765
)
genome : 9,250,247 - 9,250,750 (504)
query : 1 - 442 (442/453)
2 exons
identity = 0.986
3'(0.994;0.951)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194365)
HIX0194365
HIT000584483_10 (
ENST00000480465
)
genome : 9,250,250 - 9,250,737 (488)
query : 2 - 489 (488/489)
1 exon
identity = 0.973
3'(0.973)5'
coverage = 0.998
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194365)
HIX0194365
HIT000478674_10 (
ENST00000395291
)
genome : 9,250,256 - 9,250,747 (492)
query : 1 - 492 (492/492)
1 exon
identity = 0.972
3'(0.972)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194365)
HIX0194365
HIT000566343_12 (
ENST00000461458
)
genome : 9,250,256 - 9,250,738 (483)
query : 1 - 483 (483/483)
1 exon
identity = 0.975
3'(0.975)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194365)
HIX0194365
HIT000568393_09 (
ENST00000463605
)
genome : 9,250,256 - 9,250,738 (483)
query : 1 - 483 (483/483)
1 exon
identity = 0.971
3'(0.971)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194365)
HIX0194365
HIT000576682_09 (
ENST00000472300
)
genome : 9,250,256 - 9,250,738 (483)
query : 1 - 483 (483/483)
1 exon
identity = 0.973
3'(0.973)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194365)
HIX0194365
HIT000586433_07 (
ENST00000482506
)
genome : 9,250,256 - 9,250,738 (483)
query : 1 - 483 (483/483)
1 exon
identity = 0.950
3'(0.950)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194365)
HIX0194365
HIT000590491_08 (
ENST00000486753
)
genome : 9,250,256 - 9,250,738 (483)
query : 1 - 483 (483/483)
1 exon
identity = 0.967
3'(0.967)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194365)
HIX0194365
HIT000591943_09 (
ENST00000488289
)
genome : 9,250,256 - 9,250,738 (483)
query : 1 - 483 (483/483)
1 exon
identity = 0.973
3'(0.973)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194365)
HIX0194365
HIT000596902_04 (
ENST00000493466
)
genome : 9,250,256 - 9,250,738 (483)
query : 1 - 478 (478/478)
1 exon
identity = 0.950
3'(0.950)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194365)
HIX0194365
HIT000597704_08 (
ENST00000494303
)
genome : 9,250,256 - 9,250,738 (483)
query : 1 - 480 (480/480)
1 exon
identity = 0.957
3'(0.957)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194365)
HIX0194365
HIT000598891_10 (
ENST00000495531
)
genome : 9,250,256 - 9,250,738 (483)
query : 1 - 483 (483/483)
1 exon
identity = 0.992
3'(0.992)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194365)
HIX0194365
HIT000482055_08 (
ENST00000398929
)
genome : 9,250,256 - 9,250,651 (396)
query : 1 - 396 (396/396)
1 exon
identity = 0.962
3'(0.962)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194365)
HIX0194365
HIT000594959_13 (
ENST00000491435
)
genome : 9,250,258 - 9,250,738 (481)
query : 1 - 481 (481/481)
1 exon
identity = 0.985
3'(0.985)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194365)
HIX0194365
HIT000712697_07 (
ENST00000600955
)
genome : 9,250,258 - 9,250,737 (480)
query : 1 - 480 (480/480)
1 exon
identity = 0.965
3'(0.965)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194365)
HIX0194365
HIT000588312_13 (
ENST00000484462
)
genome : 9,250,259 - 9,250,738 (480)
query : 1 - 480 (480/480)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194365)
HIX0194365
HIT000588969_07 (
ENST00000485147
)
genome : 9,250,261 - 9,250,738 (478)
query : 1 - 478 (478/480)
1 exon
identity = 0.958
3'(0.958)5'
coverage = 0.996
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194365)
HIX0194365
HIT000589724_08 (
ENST00000485945
)
genome : 9,250,261 - 9,250,738 (478)
query : 1 - 478 (478/480)
1 exon
identity = 0.979
3'(0.979)5'
coverage = 0.996
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194365)
HIX0194365
HIT000596760_02 (
ENST00000493317
)
genome : 9,250,373 - 9,250,787 (415)
query : 20 - 438 (419/438)
1 exon
identity = 0.957
3'(0.957)5'
coverage = 0.957
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194365)
HIX0194365
HIT000437527_16
(
DQ570996
)
genome : 9,250,407 - 9,250,438 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194365)
HIX0223979
HIT000692341 (
ENST00000580426
)
genome : 9,407,692 - 9,407,761 (70)
query : 1 - 70 (70/70)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223979)
HIX0223985
HIT000692970 (
ENST00000581060
)
genome : 9,407,764 - 9,407,831 (68)
query : 1 - 68 (68/68)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223985)
HIX0038920
HIT000306543
(
CR749525
)
genome : 9,449,445 - 9,501,950 (52,506)
query : 1 - 5,301 (5,301/5,375)
3 exons
identity = 0.998
5'(0.995;1.000;0.998)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038920)
HIX0038920
HIT000677433 (
ENST00000564305
)
genome : 9,449,445 - 9,501,950 (52,506)
query : 1 - 5,298 (5,298/5,298)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038920)
HIX0223759
HIT000681021 (
ENST00000568030
)
genome : 9,535,151 - 9,538,842 (3,692)
query : 1 - 536 (536/536)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223759)
HIX0223872
HIT000683028 (
ENST00000570118
)
genome : 9,539,867 - 9,549,362 (9,496)
query : 1 - 451 (451/451)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223872)
HIX0223868
HIT000682956 (
ENST00000570038
)
genome : 9,560,512 - 9,611,421 (50,910)
query : 1 - 796 (796/796)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223868)
HIX0038852
HIT000097042
(
BC042005
)
genome : 9,643,097 - 9,644,765 (1,669)
query : 1 - 1,668 (1,668/1,683)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038852)
HIX0212235
HIT000616521 (
ENST00000517118
)
genome : 9,693,954 - 9,694,085 (132)
query : 1 - 132 (132/132)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212235)
HIX0223394
HIT000674758 (
ENST00000561538
)
genome : 9,760,742 - 9,770,700 (9,959)
query : 1 - 660 (660/660)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223394)
HIX0038671
HIT000306771
(
CR749843
)
genome : 9,847,271 - 9,854,556 (7,286)
query : 1 - 7,286 (7,286/7,363)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038671)
HIX0038671
HIT000197844 (
NM_000833
)
genome : 9,847,265 - 10,276,611 (429,347)
query : 1 - 14,446 (14,446/14,468)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038671)
HIX0038671
HIT000559916 (
NM_001134407
)
genome : 9,847,265 - 10,276,263 (428,999)
query : 1 - 14,684 (14,684/14,706)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038671)
HIX0038671
HIT000676038 (
ENST00000562861
)
genome : 9,847,272 - 9,851,895 (4,624)
query : 1 - 4,624 (4,624/4,624)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038671)
HIX0038671
HIT000044571
(
AK124698
)
genome : 9,847,272 - 9,851,299 (4,028)
query : 1 - 4,025 (4,025/4,025)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038671)
HIX0038671
HIT000217649
(
U07199
)
genome : 9,849,612 - 9,849,707 (96)
query : 1 - 96 (96/96)
1 exon
identity = 0.990
3'(0.990)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038671)
HIX0038671
HIT000479903 (
ENST00000396573
)
genome : 9,852,376 - 10,276,611 (424,236)
query : 1 - 9,335 (9,335/9,335)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038671)
HIX0038671
HIT000217852
(
U09002
)
genome : 9,855,422 - 10,275,870 (420,449)
query : 1 - 6,137 (6,137/6,137)
13 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.995;1.000;1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038671)
HIX0038671
HIT000490244
(
AK295620
)
genome : 9,856,532 - 10,064,652 (208,121)
query : 3 - 4,167 (4,165/4,178)
13 exons
identity = 0.999
3'(1.000;0.998;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.995;0.991;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038671)
HIX0038671
HIT000559917 (
NM_001134408
)
genome : 9,856,532 - 10,275,924 (419,393)
query : 1 - 4,735 (4,735/4,745)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038671)
HIX0038671
HIT000675318 (
ENST00000562109
)
genome : 9,856,532 - 10,274,289 (417,758)
query : 1 - 4,547 (4,547/4,547)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038671)
HIX0038671
HIT000505031 (
ENST00000404927
)
genome : 9,856,533 - 10,275,924 (419,392)
query : 1 - 4,734 (4,734/4,734)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038671)
HIX0038671
HIT000634304 (
ENST00000535259
)
genome : 9,856,533 - 10,064,652 (208,120)
query : 1 - 4,164 (4,164/4,164)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038671)
HIX0038671
HIT000222163
(
U90277
)
genome : 9,856,903 - 10,276,611 (419,709)
query : 1 - 4,808 (4,808/4,808)
14 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038671)
HIX0038671
HIT000126808 (
ENST00000330684
)
genome : 9,856,918 - 10,276,263 (419,346)
query : 1 - 5,031 (5,031/5,031)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038671)
HIX0038671
HIT000329630
(
AB209695
)
genome : 9,856,918 - 10,276,263 (419,346)
query : 1 - 5,031 (5,031/5,031)
13 exons
identity = 0.999
3'(0.999;0.996;1.000;0.994;1.000;1.000;1.000;
1.000;0.995;1.000;1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038671)
HIX0038671
HIT000387421
(
BC117131
)
genome : 9,856,948 - 10,274,289 (417,342)
query : 9 - 4,139 (4,131/4,139)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038671)
HIX0038671
HIT000501733
(
BC143273
)
genome : 9,856,948 - 10,274,289 (417,342)
query : 9 - 4,139 (4,131/4,139)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038671)
HIX0038671
HIT000479905 (
ENST00000396575
)
genome : 9,857,006 - 10,274,268 (417,263)
query : 1 - 4,395 (4,395/4,395)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038671)
HIX0038671
HIT000566185 (
ENST00000461292
)
genome : 9,857,032 - 9,857,663 (632)
query : 1 - 289 (289/289)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038671)
HIX0038671
HIT000568323 (
ENST00000463531
)
genome : 9,858,696 - 9,863,085 (4,390)
query : 1 - 488 (488/488)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038671)
HIX0038671
HIT000679714 (
ENST00000566683
)
genome : 9,943,744 - 10,125,421 (181,678)
query : 1 - 430 (430/430)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038671)
HIX0038671
HIT000681231 (
ENST00000568247
)
genome : 10,031,924 - 10,064,652 (32,729)
query : 1 - 538 (538/538)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038671)
HIX0038671
HIT000679701 (
ENST00000566670
)
genome : 10,032,011 - 10,125,437 (93,427)
query : 1 - 654 (654/654)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038671)
HIX0223833
HIT000682164 (
ENST00000569218
)
genome : 10,127,541 - 10,131,154 (3,614)
query : 1 - 488 (488/488)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223833)
HIX0173313
HIT000680880 (
ENST00000567885
)
genome : 10,205,239 - 10,206,742 (1,504)
query : 1 - 1,504 (1,504/1,504)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173313)
HIX0173366
HIT000455901_13
(
DQ589370
)
genome : 10,205,499 - 10,205,529 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173366)
HIX0173313
HIT000389510
(
BC127892
)
genome : 10,206,442 - 10,207,035 (594)
query : 1 - 595 (595/605)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 0.983
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173313)
HIX0173313
HIT000457307
(
DQ590776
)
genome : 10,206,643 - 10,206,673 (31)
query : 1 - 31 (31/32)
1 exon
identity = 0.968
5'(0.968)3'
coverage = 0.969
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173313)
HIX0173224
HIT000459185_09
(
DQ592654
)
genome : 10,207,165 - 10,207,194 (30)
query : 1 - 30 (30/30)
1 exon
identity = 0.967
3'(0.967)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173224)
HIX0173224
HIT000454486_09
(
DQ587955
)
genome : 10,207,170 - 10,207,199 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173224)
HIX0173223
HIT000449661_10
(
DQ583130
)
genome : 10,207,364 - 10,207,394 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173223)
HIX0173223
HIT000449660_10
(
DQ583129
)
genome : 10,207,365 - 10,207,394 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173223)
HIX0038866
HIT000098628
(
BC047499
)
genome : 10,227,197 - 10,228,053 (857)
query : 1 - 856 (856/871)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038866)
HIX0194394
pHIT000026492 ( pHIT000026492 )
genome : 10,251,045 - 10,271,406 (20,362)
query : 1 - 345 (345/345)
3 exons
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194394)
CAGE tag :
H05BA97D0504
HIX0038671
HIT000427728
(
AK308862
)
genome : 10,273,348 - 10,276,116 (2,769)
query : 1 - 1,322 (1,322/1,322)
2 exons
identity = 0.999
3'(1.000;0.997)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038671)
HIX0038671
HIT000679696 (
ENST00000566665
)
genome : 10,273,348 - 10,276,116 (2,769)
query : 1 - 1,322 (1,322/1,322)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038671)
HIX0012811
HIT000677902 (
ENST00000564797
)
genome : 10,420,291 - 10,513,477 (93,187)
query : 1 - 450 (450/450)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012811)
HIX0038825
HIT000094523
(
BC036623
)
genome : 10,445,312 - 10,446,609 (1,298)
query : 4 - 1,300 (1,297/1,315)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 0.998
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038825)
HIX0038825
HIT000682161 (
ENST00000569215
)
genome : 10,445,312 - 10,446,609 (1,298)
query : 1 - 1,298 (1,298/1,313)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038825)
HIX0038843
HIT000096209
(
BC040539
)
genome : 10,449,614 - 10,454,105 (4,492)
query : 1 - 4,493 (4,493/4,507)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038843)
HIX0012811
HIT000209652 (
NM_024997
)
genome : 10,479,912 - 10,577,495 (97,584)
query : 1 - 3,665 (3,665/3,677)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012811)
HIX0012811
HIT000723527 (
NM_001256160
)
genome : 10,479,912 - 10,577,495 (97,584)
query : 1 - 3,641 (3,641/3,653)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012811)
HIX0012811
HIT000726430 (
NR_045816
)
genome : 10,479,912 - 10,577,495 (97,584)
query : 1 - 3,433 (3,433/3,445)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012811)
HIX0012811
HIT000479889 (
ENST00000396559
)
genome : 10,479,912 - 10,577,495 (97,584)
query : 1 - 3,641 (3,641/3,641)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012811)
HIX0012811
HIT000479890 (
ENST00000396560
)
genome : 10,479,912 - 10,577,495 (97,584)
query : 1 - 3,665 (3,665/3,665)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012811)
HIX0012811
HIT000018281
(
AK093414
)
genome : 10,479,912 - 10,575,970 (96,059)
query : 1 - 2,114 (2,114/2,114)
12 exons
identity = 0.998
5'(1.000;1.000;0.980;0.998;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012811)
HIX0012811
HIT000675723 (
ENST00000562527
)
genome : 10,479,912 - 10,524,529 (44,618)
query : 1 - 625 (625/625)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012811)
HIX0012811
HIT000093263
(
BC033891
)
genome : 10,479,918 - 10,577,495 (97,578)
query : 6 - 3,661 (3,656/3,676)
12 exons
identity = 0.998
5'(1.000;0.987;0.996;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.999)3'
coverage = 0.999
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012811)
HIX0012811
HIT000491189
(
AK296565
)
genome : 10,479,916 - 10,576,343 (96,428)
query : 2 - 999 (998/999)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 0.999
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012811)
HIX0012811
HIT000675311 (
ENST00000562102
)
genome : 10,479,915 - 10,524,729 (44,815)
query : 1 - 558 (558/558)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012811)
HIX0012811
HIT000675145 (
ENST00000561932
)
genome : 10,479,915 - 10,522,861 (42,947)
query : 1 - 538 (538/538)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012811)
HIX0012811
HIT000679355 (
ENST00000566316
)
genome : 10,479,915 - 10,481,598 (1,684)
query : 1 - 576 (576/576)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012811)
HIX0012811
HIT000643012 (
ENST00000543967
)
genome : 10,479,916 - 10,576,343 (96,428)
query : 1 - 998 (998/998)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012811)
HIX0012811
HIT000493664
(
AK299040
)
genome : 10,479,918 - 10,575,975 (96,058)
query : 1 - 1,904 (1,904/1,904)
10 exons
identity = 0.997
5'(1.000;0.987;0.996;1.000;1.000;1.000;1.000;
1.000;1.000;0.996)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012811)
HIX0012811
HIT000634895 (
ENST00000535850
)
genome : 10,479,918 - 10,575,975 (96,058)
query : 1 - 1,907 (1,907/1,907)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012811)
HIX0012811
HIT000682826 (
ENST00000569900
)
genome : 10,479,918 - 10,524,700 (44,783)
query : 1 - 559 (559/559)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012811)
HIX0012811
HIT000682861 (
ENST00000569939
)
genome : 10,479,918 - 10,524,556 (44,639)
query : 1 - 564 (564/564)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012811)
HIX0012811
HIT000096924
(
BC041882
)
genome : 10,479,918 - 10,481,595 (1,678)
query : 1 - 1,678 (1,678/1,694)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 0.999
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012811)
HIX0012811
HIT000675597 (
ENST00000562396
)
genome : 10,479,918 - 10,481,598 (1,681)
query : 1 - 1,681 (1,681/1,681)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012811)
HIX0012811
HIT000683073 (
ENST00000570163
)
genome : 10,480,949 - 10,481,594 (646)
query : 1 - 559 (559/559)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012811)
HIX0012811
HIT000726429 (
NR_045815
)
genome : 10,522,725 - 10,577,495 (54,771)
query : 1 - 3,439 (3,439/3,451)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012811)
HIX0012811
HIT000681018 (
ENST00000568027
)
genome : 10,522,758 - 10,577,495 (54,738)
query : 1 - 3,406 (3,406/3,406)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012811)
HIX0012811
HIT000501047
(
BC137079
)
genome : 10,522,758 - 10,577,237 (54,480)
query : 1 - 3,306 (3,306/3,306)
11 exons
identity = 1.000
5'(0.991;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012811)
HIX0012811
HIT000502878
(
BC144468
)
genome : 10,522,758 - 10,577,237 (54,480)
query : 1 - 3,148 (3,148/3,148)
10 exons
identity = 1.000
5'(0.991;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012811)
HIX0012811
HIT000310423 (
ENST00000356427
)
genome : 10,524,452 - 10,577,494 (53,043)
query : 1 - 3,463 (3,463/3,463)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012811)
HIX0012811
HIT000123894 (
ENST00000324570
)
genome : 10,524,478 - 10,577,494 (53,017)
query : 1 - 3,370 (3,370/3,370)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012811)
HIX0012811
HIT000331934
(
AY560615
)
genome : 10,524,478 - 10,576,106 (51,629)
query : 1 - 2,046 (2,046/2,046)
10 exons
identity = 0.999
5'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012811)
HIX0012811
HIT000027899
(
AL832987
)
genome : 10,524,529 - 10,577,495 (52,967)
query : 1 - 3,228 (3,228/3,240)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.999)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012811)
HIX0012811
HIT000331272
(
AK223492
)
genome : 10,531,969 - 10,577,495 (45,527)
query : 10 - 2,476 (2,467/2,499)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.998)3'
coverage = 0.987
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012811)
HIX0012811
HIT000006004
(
AK022730
)
genome : 10,532,011 - 10,577,494 (45,484)
query : 1 - 2,423 (2,423/2,423)
8 exons
identity = 0.997
5'(1.000;1.000;1.000;0.986;1.000;1.000;1.000;
0.997)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012811)
HIX0012811
HIT000263864
(
BC069713
)
genome : 10,532,034 - 10,577,256 (45,223)
query : 1 - 2,166 (2,166/2,166)
8 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.997)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012811)
HIX0012811
HIT000263881
(
BC069730
)
genome : 10,532,034 - 10,577,256 (45,223)
query : 1 - 2,160 (2,160/2,160)
8 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.997)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012811)
HIX0012811
HIT000263846
(
BC069695
)
genome : 10,532,034 - 10,577,255 (45,222)
query : 1 - 2,162 (2,162/2,162)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.999)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012811)
HIX0027052
HIT000047968
(
AK128095
)
genome : 10,539,166 - 10,543,604 (4,439)
query : 1 - 4,439 (4,439/4,439)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027052)
HIX0012811
HIT000678684 (
ENST00000565616
)
genome : 10,547,879 - 10,551,468 (3,590)
query : 1 - 610 (610/610)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012811)
HIX0018476
HIT000014559
(
AK057952
)
genome : 10,556,543 - 10,569,577 (13,035)
query : 1 - 2,680 (2,680/2,680)
3 exons
identity = 0.996
3'(0.997;0.993;0.993)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018476)
HIX0012811
HIT000678528 (
ENST00000565450
)
genome : 10,565,781 - 10,574,820 (9,040)
query : 1 - 468 (468/468)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012811)
HIX0038590
HIT000137466 (
ENST00000344836
)
genome : 8,985,951 - 9,057,341 (71,391)
query : 1 - 5,412 (5,412/5,412)
31 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038590)
HIX0038590
HIT000200295 (
NM_003470
)
genome : 8,985,951 - 9,057,341 (71,391)
query : 1 - 5,412 (5,412/5,412)
31 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038590)
HIX0038590
HIT000677099 (
ENST00000563961
)
genome : 8,986,629 - 9,057,279 (70,651)
query : 1 - 4,533 (4,533/4,533)
31 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038590)
HIX0038590
HIT000327987
(
Z72499
)
genome : 8,987,349 - 9,057,341 (69,993)
query : 1 - 4,014 (4,014/4,022)
31 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038590)
HIX0038590
HIT000253401
(
AY376241
)
genome : 8,987,645 - 9,030,543 (42,899)
query : 6 - 3,549 (3,544/3,579)
31 exons
identity = 0.997
3'(1.000;0.991;1.000;0.989;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.981)5'
coverage = 0.998
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038590)
HIX0038590
HIT000500054
(
AK316441
)
genome : 8,987,653 - 9,030,586 (42,934)
query : 2 - 3,580 (3,579/3,580)
31 exons
identity = 0.998
3'(1.000;1.000;0.988;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.993)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038590)
HIX0038590
HIT000363164 (
ENST00000381886
)
genome : 8,987,653 - 9,030,586 (42,934)
query : 1 - 3,579 (3,579/3,579)
31 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038590)
HIX0038590
HIT000497395
(
AK302771
)
genome : 8,987,653 - 9,030,518 (42,866)
query : 1 - 3,511 (3,511/3,511)
31 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.987)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038590)
HIX0038590
HIT000497536
(
AK302912
)
genome : 8,987,797 - 9,030,530 (42,734)
query : 1 - 3,554 (3,554/3,554)
32 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.989)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038590)
HIX0038590
HIT000634908 (
ENST00000535863
)
genome : 8,987,797 - 9,030,530 (42,734)
query : 1 - 3,554 (3,554/3,554)
32 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038590)
HIX0038590
HIT000678533 (
ENST00000565455
)
genome : 8,987,797 - 9,030,530 (42,734)
query : 1 - 3,554 (3,554/3,554)
32 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038590)
HIX0038590
HIT000497105
(
AK302481
)
genome : 8,988,902 - 9,050,237 (61,336)
query : 1 - 3,193 (3,193/3,193)
29 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.992;
0.991;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038590)
HIX0038590
HIT000676250 (
ENST00000563085
)
genome : 8,988,902 - 9,050,237 (61,336)
query : 1 - 3,194 (3,194/3,194)
29 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038590)
HIX0194394
pHIT000026492 ( pHIT000026492 )
genome : 10,251,045 - 10,271,406 (20,362)
query : 1 - 345 (345/345)
3 exons
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194394)
CAGE tag :
H04BA66B1801,H04BA69E0403,H04BA73F0902
H05BA16I1902,H05BA97D0504
AC022167.7
9000001-9108685 F -
NCBI
AC087190.5
9108686-9268256 F -
NCBI
AC092122.5
9268257-9427789 F -
NCBI
AC012178.5
9427790-9549039 F -
NCBI
AC007221.2
9549040-9727654 F +
NCBI
AC007218.6
9727655-9920250 F +
NCBI
AC006531.1
9920251-10015589 F +
NCBI
AC026423.9
10015590-10122543 F +
NCBI
AC133565.5
10122544-10272476 F -
NCBI
AC022168.6
10272477-10428837 F +
NCBI
AC131649.2
10428838-10600000 F +
NCBI