bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0013041
HIT000027000
(
AL832088
)
(72 kDa type IV collagenase; EC=3.4.24.24; 72 kDa gelatinase; Gelatinase A; Matrix metalloproteinase-2; MMP-2; TBE-1; Contains: PEX; Precursor;)
genome : 55,423,612 - 55,540,149 (116,538)
query : 2 - 3,235 (3,234/3,331)
14 exons
identity = 0.997
5'(1.000;1.000;1.000;0.994;1.000;0.994;1.000;
0.993;1.000;1.000;0.982;0.994)3'
coverage = 0.999
EC number :
EC 3.4.24.24
InterPro :
IPR000562 : Fibronectin, type II, collagen-binding
IPR000585 : Hemopexin-like domain
IPR001818 : Peptidase M10, metallopeptidase
IPR002477 : Peptidoglycan binding-like
IPR006026 : Peptidase, metallopeptidase
IPR013806 : Kringle-like fold
IPR018486 : Hemopexin, conserved site
IPR018487 : Hemopexin-like repeats
IPR021158 : Peptidase M10A, cysteine switch, zinc binding site
IPR021190 : Peptidase M10A
IPR024079 : Metallopeptidase, catalytic domain
IPR028708 : 72kDa type IV collagenase
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
0031012 : Cellular Component : extracellular matrix
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 13, nucl 7.5, mito 4, cysk 3,
mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013041)
HIX0013041
HIT000683215 (
ENST00000570308
)
(72 kDa type IV collagenase; EC=3.4.24.24; 72 kDa gelatinase; Gelatinase A; Matrix metalloproteinase-2; MMP-2; TBE-1; Contains: PEX; Precursor;)
genome : 55,423,612 - 55,540,149 (116,538)
query : 1 - 3,235 (3,235/3,235)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.24.24
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 13, nucl 7.5, mito 4, cysk 3,
mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013041)
HIX0013041
HIT000681685 (
ENST00000568715
)
(72 kDa type IV collagenase; EC=3.4.24.24; 72 kDa gelatinase; Gelatinase A; Matrix metalloproteinase-2; MMP-2; TBE-1; Contains: PEX; Precursor;)
genome : 55,512,742 - 55,519,264 (6,523)
query : 1 - 566 (566/566)
4 exons
identity = 0.993
5'(0.993;0.987;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.24.24
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, nucl 9, extr 7, cyto_plas 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013041)
HIX0013041
HIT000103361 (
ENST00000219070
)
(72 kDa type IV collagenase; EC=3.4.24.24; 72 kDa gelatinase; Gelatinase A; Matrix metalloproteinase-2; MMP-2; TBE-1; Contains: PEX; Precursor;)
genome : 55,512,883 - 55,540,603 (27,721)
query : 1 - 3,741 (3,741/3,741)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.24.24
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, E.R. 7.5, E.R._golg 4.5, pero 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013041)
HIX0013041
HIT000201275 (
NM_004530
)
(72 kDa type IV collagenase; EC=3.4.24.24; 72 kDa gelatinase; Gelatinase A; Matrix metalloproteinase-2; MMP-2; TBE-1; Contains: PEX; Precursor;)
genome : 55,513,081 - 55,540,585 (27,505)
query : 1 - 3,525 (3,525/3,549)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.24.24
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, E.R. 7.5, E.R._golg 4.5, pero 2, lyso 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013041)
HIX0013041
HIT000322299
(
X58968
)
(Non-protein coding transcript.)
genome : 55,513,092 - 55,513,491 (400)
query : 1 - 400 (400/400)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013041)
HIX0013041
HIT000431577
(
AK312711
)
(72 kDa type IV collagenase; EC=3.4.24.24; 72 kDa gelatinase; Gelatinase A; Matrix metalloproteinase-2; MMP-2; TBE-1; Contains: PEX; Precursor;)
genome : 55,513,115 - 55,539,354 (26,240)
query : 1 - 2,260 (2,260/2,260)
13 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.994;
1.000;1.000;1.000;0.994;0.991;1.000)3'
coverage = 1.000
EC number :
EC 3.4.24.24
InterPro :
IPR000562 : Fibronectin, type II, collagen-binding
IPR000585 : Hemopexin-like domain
IPR001818 : Peptidase M10, metallopeptidase
IPR002477 : Peptidoglycan binding-like
IPR006026 : Peptidase, metallopeptidase
IPR013806 : Kringle-like fold
IPR018487 : Hemopexin-like repeats
IPR021158 : Peptidase M10A, cysteine switch, zinc binding site
IPR021190 : Peptidase M10A
IPR024079 : Metallopeptidase, catalytic domain
IPR028708 : 72kDa type IV collagenase
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
0031012 : Cellular Component : extracellular matrix
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, E.R. 7.5, E.R._golg 4.5, pero 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013041)
HIX0013041
HIT000031004
(
BC002576
)
Representative transcript
(72 kDa type IV collagenase; EC=3.4.24.24; 72 kDa gelatinase; Gelatinase A; Matrix metalloproteinase-2; MMP-2; TBE-1; Contains: PEX; Precursor;)
genome : 55,513,126 - 55,540,149 (27,024)
query : 1 - 3,044 (3,044/3,065)
13 exons
identity = 0.998
5'(0.998;1.000;1.000;1.000;0.994;1.000;0.994;
1.000;0.993;1.000;1.000;0.991;0.999)3'
coverage = 1.000
EC number :
EC 3.4.24.24
InterPro :
IPR000562 : Fibronectin, type II, collagen-binding
IPR000585 : Hemopexin-like domain
IPR001818 : Peptidase M10, metallopeptidase
IPR002477 : Peptidoglycan binding-like
IPR006026 : Peptidase, metallopeptidase
IPR013806 : Kringle-like fold
IPR018486 : Hemopexin, conserved site
IPR018487 : Hemopexin-like repeats
IPR021158 : Peptidase M10A, cysteine switch, zinc binding site
IPR021190 : Peptidase M10A
IPR024079 : Metallopeptidase, catalytic domain
IPR028708 : 72kDa type IV collagenase
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
0031012 : Cellular Component : extracellular matrix
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, E.R. 7.5, E.R._golg 4.5, pero 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013041)
Ortholog candidate ( ->
Evola
)
Oryzias
sp. (Medaka) : AB033754
Macaca
sp. (Macaque) : AB170804
Takifugu
sp. (Fugu) : AB193483
Canis
sp. (Dog) : AF177217
Equus
sp. (Horse) : AJ243311
Mus
sp. (Mouse) : BC070430
Danio
sp. (Zebrafish) : BC076545
Bos
sp. (Cow) : BC149404
Monodelphis
sp. (Opossum) : ENSMODT00000016839
Pongo
sp. (Orangutan) : ENSPPYT00000008651
Tetraodon
sp. (Tetraodon) : GSTENT00012583001
Gallus
sp. (Chicken) : U07775
Rattus
sp. (Rat) : U65656
Pan
sp. (Chimpanzee) : XM_001167467
HIX0013041
HIT000191140
(
J03210
)
(72 kDa type IV collagenase; EC=3.4.24.24; 72 kDa gelatinase; Gelatinase A; Matrix metalloproteinase-2; MMP-2; TBE-1; Contains: PEX; Precursor;)
genome : 55,513,440 - 55,540,151 (26,712)
query : 2 - 2,733 (2,732/2,733)
13 exons
identity = 0.998
5'(1.000;1.000;0.993;1.000;0.994;1.000;0.994;
1.000;0.993;1.000;0.994;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.24.24
InterPro :
IPR000562 : Fibronectin, type II, collagen-binding
IPR000585 : Hemopexin-like domain
IPR001818 : Peptidase M10, metallopeptidase
IPR002477 : Peptidoglycan binding-like
IPR006026 : Peptidase, metallopeptidase
IPR013806 : Kringle-like fold
IPR018486 : Hemopexin, conserved site
IPR018487 : Hemopexin-like repeats
IPR021158 : Peptidase M10A, cysteine switch, zinc binding site
IPR021190 : Peptidase M10A
IPR024079 : Metallopeptidase, catalytic domain
IPR028708 : 72kDa type IV collagenase
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
0031012 : Cellular Component : extracellular matrix
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.3333, cyto 15.5, nucl 15,
cyto_mito 8.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013041)
HIX0013041
HIT000677967 (
ENST00000564864
)
(Collagenase 3; EC=3.4.24.-; Matrix metalloproteinase-13; MMP-13; UMRCASE; Precursor; Fragment;)
genome : 55,513,910 - 55,519,688 (5,779)
query : 1 - 736 (736/736)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.24.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 8, extr 4, cyto_pero 4, cyto_plas 4,
cyto_golg 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013041)
HIX0013041
HIT000496160
(
AK301536
)
(72 kDa type IV collagenase; EC=3.4.24.24; 72 kDa gelatinase; Gelatinase A; Matrix metalloproteinase-2; MMP-2; TBE-1; Contains: PEX; Precursor;)
genome : 55,514,445 - 55,539,437 (24,993)
query : 1 - 1,978 (1,978/1,978)
13 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.995)3'
coverage = 1.000
EC number :
EC 3.4.24.24
InterPro :
IPR000562 : Fibronectin, type II, collagen-binding
IPR000585 : Hemopexin-like domain
IPR001818 : Peptidase M10, metallopeptidase
IPR002477 : Peptidoglycan binding-like
IPR006026 : Peptidase, metallopeptidase
IPR013806 : Kringle-like fold
IPR018486 : Hemopexin, conserved site
IPR018487 : Hemopexin-like repeats
IPR021158 : Peptidase M10A, cysteine switch, zinc binding site
IPR021190 : Peptidase M10A
IPR024079 : Metallopeptidase, catalytic domain
IPR028708 : 72kDa type IV collagenase
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
0031012 : Cellular Component : extracellular matrix
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.3333, cyto 15.5, nucl 15,
cyto_mito 8.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013041)
HIX0013041
HIT000642530 (
ENST00000543485
)
(72 kDa type IV collagenase; EC=3.4.24.24; 72 kDa gelatinase; Gelatinase A; Matrix metalloproteinase-2; MMP-2; TBE-1; Contains: PEX; Precursor;)
genome : 55,514,445 - 55,539,437 (24,993)
query : 1 - 1,978 (1,978/1,978)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.24.24
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.3333, cyto 15.5, nucl 15,
cyto_mito 8.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013041)
HIX0013041
HIT000429180
(
AK310314
)
(72 kDa type IV collagenase; EC=3.4.24.24; 72 kDa gelatinase; Gelatinase A; Matrix metalloproteinase-2; MMP-2; TBE-1; Contains: PEX; Precursor;)
genome : 55,515,469 - 55,539,671 (24,203)
query : 1 - 2,469 (2,469/2,469)
13 exons
identity = 0.999
5'(0.997;1.000;1.000;1.000;0.994;1.000;0.994;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.24.24
InterPro :
IPR000562 : Fibronectin, type II, collagen-binding
IPR000585 : Hemopexin-like domain
IPR001818 : Peptidase M10, metallopeptidase
IPR002477 : Peptidoglycan binding-like
IPR006026 : Peptidase, metallopeptidase
IPR013806 : Kringle-like fold
IPR018486 : Hemopexin, conserved site
IPR018487 : Hemopexin-like repeats
IPR021158 : Peptidase M10A, cysteine switch, zinc binding site
IPR021190 : Peptidase M10A
IPR024079 : Metallopeptidase, catalytic domain
IPR028708 : 72kDa type IV collagenase
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0006508 : Biological Process : proteolysis
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
0031012 : Cellular Component : extracellular matrix
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto 14, cyto_nucl 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013041)
HIX0013041
HIT000535576 (
ENST00000437642
)
(72 kDa type IV collagenase isoform b.)
genome : 55,515,469 - 55,539,671 (24,203)
query : 1 - 2,469 (2,469/2,469)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.24.24
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 13, cysk 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013041)
HIX0013041
HIT000559380 (
NM_001127891
)
(72 kDa type IV collagenase isoform b.)
genome : 55,515,474 - 55,540,585 (25,112)
query : 1 - 3,378 (3,378/3,402)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.24.24
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, nucl 13, cysk 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013041)
HIX0013041
HIT000014287
(
AK057680
)
(Matrix metalloproteinase-9; MMP-9; EC=3.4.24.35; 92 kDa gelatinase; 92 kDa type IV collagenase; Gelatinase B; GELB; Precursor;)
genome : 55,520,530 - 55,522,680 (2,151)
query : 1 - 2,151 (2,151/2,163)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
EC number :
EC 3.4.24.35
InterPro :
IPR000562 : Fibronectin, type II, collagen-binding
IPR013806 : Kringle-like fold
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 8.5, cyto_nucl 7.83333, cyto 6,
cyto_pero 3.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013041)
HIX0013041
HIT000343110
(
DQ385623
)
(Matrix metalloproteinase-9; MMP-9; EC=3.4.24.35; 92 kDa gelatinase; 92 kDa type IV collagenase; Gelatinase B; GELB; Precursor;)
genome : 55,522,515 - 55,523,634 (1,120)
query : 1 - 186 (186/186)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.24.35
InterPro :
IPR000562 : Fibronectin, type II, collagen-binding
IPR013806 : Kringle-like fold
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 2.5, cyto_nucl 2.5, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013041)
HIX0013041
HIT000683190 (
ENST00000570283
)
(72 kDa type IV collagenase; EC=3.4.24.24; 72 kDa gelatinase; Gelatinase A; Matrix metalloproteinase-2; MMP-2; TBE-1; Contains: PEX; Precursor;)
genome : 55,522,574 - 55,536,801 (14,228)
query : 1 - 755 (755/755)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.24.24
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 15.5, nucl 7, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013041)
HIX0013041
HIT000679599 (
ENST00000566564
)
(Conserved hypothetical protein.)
genome : 55,539,287 - 55,540,151 (865)
query : 1 - 443 (443/443)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013041)
HIX0223689
HIT000679936 (
ENST00000566911
)
(Conserved hypothetical protein.)
genome : 55,542,984 - 55,559,970 (16,987)
query : 1 - 832 (832/832)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 17, plas 5, cyto 5, cyto_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223689)
HIX0027027
HIT000677219 (
ENST00000564084
)
(Phospholipid/glycerol acyltransferase domain containing protein.)
genome : 55,562,405 - 55,575,940 (13,536)
query : 1 - 616 (616/616)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 5.5, cyto_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027027)
HIX0027027
HIT000046396
(
AK126523
)
Representative transcript
(Conserved hypothetical protein.)
genome : 55,572,110 - 55,575,939 (3,830)
query : 1 - 3,826 (3,826/3,826)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027027)
HIX0027027
HIT000688435 (
ENST00000576365
)
(Conserved hypothetical protein.)
genome : 55,572,112 - 55,575,939 (3,828)
query : 1 - 3,828 (3,828/3,828)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, extr 2, nucl 2, cyto 2, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027027)
HIX0222917
HIT000676260 (
ENST00000563095
)
(EF-hand domain containing protein.)
genome : 55,579,397 - 55,608,641 (29,245)
query : 1 - 712 (712/712)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 13.5, nucl 7.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222917)
HIX0222917
HIT000679413 (
ENST00000566375
)
(Conserved hypothetical protein.)
genome : 55,583,218 - 55,585,245 (2,028)
query : 1 - 482 (482/482)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 8, cyto_pero 8, cyto_plas 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222917)
HIX0222917
HIT000678149 (
ENST00000565056
)
(EF-hand domain pair containing protein.)
genome : 55,590,835 - 55,616,924 (26,090)
query : 1 - 423 (423/423)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 18, cyto 4, mito 4, cyto_mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222917)
HIX0202297
HIT000032582
(
BC006000
)
Representative transcript
(Calpain small subunit 2; CSS2; Calcium-dependent protease small subunit 2;)
genome : 55,600,584 - 55,601,592 (1,009)
query : 1 - 1,009 (1,009/1,040)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.998
InterPro :
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
GO :
0005509 : Molecular Function : calcium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 14.5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202297)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK009171
Danio
sp. (Zebrafish) : BC151952
Tetraodon
sp. (Tetraodon) : CR731541
Oryzias
sp. (Medaka) : ENSORLT00000000599
Rattus
sp. (Rat) : XM_001055380
Macaca
sp. (Macaque) : XM_001088386
Gallus
sp. (Chicken) : XM_001232968
Monodelphis
sp. (Opossum) : XM_001364214
Equus
sp. (Horse) : XM_001490683
Pan
sp. (Chimpanzee) : XM_510972
Canis
sp. (Dog) : XM_544399
HIX0202297
HIT000210561 (
NM_032330
)
(Calpain small subunit 2; CSS2; Calcium-dependent protease small subunit 2;)
genome : 55,600,584 - 55,601,592 (1,009)
query : 1 - 1,009 (1,009/1,040)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 14.5, mito 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202297)
HIX0202297
HIT000555260 (
ENST00000457326
)
(Calpain small subunit 2; CSS2; Calcium-dependent protease small subunit 2;)
genome : 55,600,584 - 55,601,599 (1,016)
query : 1 - 1,016 (1,016/1,016)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 14.5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202297)
HIX0202297
HIT000032439
(
BC005397
)
(Calpain small subunit 2; CSS2; Calcium-dependent protease small subunit 2;)
genome : 55,600,596 - 55,601,595 (1,000)
query : 1 - 1,000 (1,000/1,029)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
GO :
0005509 : Molecular Function : calcium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 14.5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202297)
HIX0202297
HIT000083900
(
AY052551
)
(Calpain small subunit 2; CSS2; Calcium-dependent protease small subunit 2;)
genome : 55,600,613 - 55,601,593 (981)
query : 2 - 982 (981/982)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 0.999
InterPro :
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
GO :
0005509 : Molecular Function : calcium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 14.5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202297)
HIX0222917
HIT000675504 (
ENST00000562299
)
(EF-hand domain containing protein.)
genome : 55,612,930 - 55,617,149 (4,220)
query : 1 - 551 (551/551)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 16, cyto_nucl 9.5, nucl 7, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222917)
HIX0222917
HIT000006545
(
AK023271
)
(Conserved hypothetical protein.)
genome : 55,617,070 - 55,619,095 (2,026)
query : 1 - 2,026 (2,026/2,026)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, cyto_nucl 4, nucl 3.5, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222917)
HIX0222917
HIT000086568
(
BC005981
)
Representative transcript
(Conserved hypothetical protein.)
genome : 55,617,459 - 55,619,116 (1,658)
query : 1 - 1,658 (1,658/1,686)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, mito 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222917)
HIX0038519
HIT000681899 (
ENST00000568943
)
(Sodium-dependent noradrenaline transporter; Norepinephrine transporter; NET; Solute carrier family 6 member 2;)
genome : 55,689,516 - 55,736,258 (46,743)
query : 1 - 2,471 (2,471/2,471)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038519)
HIX0038519
HIT000654925 (
NM_001172501
)
(Sodium-dependent noradrenaline transporter; Norepinephrine transporter; NET; Solute carrier family 6 member 2;)
genome : 55,689,542 - 55,737,700 (48,159)
query : 1 - 3,887 (3,887/3,887)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038519)
HIX0038519
HIT000681505 (
ENST00000568529
)
(Sodium-dependent noradrenaline transporter; Norepinephrine transporter; NET; Solute carrier family 6 member 2;)
genome : 55,689,998 - 55,728,025 (38,028)
query : 1 - 1,022 (1,022/1,022)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038519)
HIX0038519
HIT000512688 (
ENST00000414754
)
(Sodium-dependent noradrenaline transporter; Norepinephrine transporter; NET; Solute carrier family 6 member 2;)
genome : 55,690,022 - 55,737,662 (47,641)
query : 1 - 3,201 (3,201/3,201)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038519)
HIX0038519
HIT000431659
(
AK312793
)
Representative transcript
(Sodium-dependent noradrenaline transporter; Norepinephrine transporter; NET; Solute carrier family 6 member 2;)
genome : 55,690,048 - 55,736,258 (46,211)
query : 1 - 1,939 (1,939/1,939)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR000175 : Sodium:neurotransmitter symporter
IPR002435 : Sodium:neurotransmitter symporter, noradrenaline
GO :
0005328 : Molecular Function : neurotransmitter:sodium symporter activity
0005887 : Cellular Component : integral component of plasma membrane
0006836 : Biological Process : neurotransmitter transport
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038519)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AB021971
Canis
sp. (Dog) : AB425320
Gallus
sp. (Chicken) : AF237673
Macaca
sp. (Macaque) : AF286026
Mus
sp. (Mouse) : BC066216
Danio
sp. (Zebrafish) : ENSDART00000103720
Equus
sp. (Horse) : ENSECAT00000012436
Monodelphis
sp. (Opossum) : ENSMODT00000001665
Oryzias
sp. (Medaka) : ENSORLT00000017076
Pongo
sp. (Orangutan) : ENSPPYT00000008653
Takifugu
sp. (Fugu) : SINFRUT00000141211
Bos
sp. (Cow) : U09198
Pan
sp. (Chimpanzee) : XM_001167680
HIX0038519
HIT000681628 (
ENST00000568655
)
(Sodium-dependent noradrenaline transporter; Norepinephrine transporter; NET; Solute carrier family 6 member 2;)
genome : 55,690,166 - 55,706,043 (15,878)
query : 1 - 750 (750/750)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038519)
HIX0038519
HIT000198049 (
NM_001043
)
(Sodium-dependent noradrenaline transporter; Norepinephrine transporter; NET; Solute carrier family 6 member 2;)
genome : 55,690,352 - 55,737,700 (47,349)
query : 1 - 3,551 (3,551/3,551)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038519)
HIX0038519
HIT000361185 (
ENST00000379906
)
(Sodium-dependent noradrenaline transporter; Norepinephrine transporter; NET; Solute carrier family 6 member 2;)
genome : 55,690,352 - 55,737,700 (47,349)
query : 1 - 3,551 (3,551/3,551)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038519)
HIX0038519
HIT000260133
(
BC060831
)
(Sodium-dependent noradrenaline transporter; Norepinephrine transporter; NET; Solute carrier family 6 member 2;)
genome : 55,690,433 - 55,736,660 (46,228)
query : 1 - 2,430 (2,430/2,445)
14 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.990;1.000;
1.000;0.992;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000175 : Sodium:neurotransmitter symporter
IPR002435 : Sodium:neurotransmitter symporter, noradrenaline
GO :
0005328 : Molecular Function : neurotransmitter:sodium symporter activity
0005887 : Cellular Component : integral component of plasma membrane
0006836 : Biological Process : neurotransmitter transport
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038519)
HIX0038519
HIT000675035 (
ENST00000561820
)
(Sodium-dependent noradrenaline transporter; Norepinephrine transporter; NET; Solute carrier family 6 member 2;)
genome : 55,690,530 - 55,739,560 (49,031)
query : 1 - 2,268 (2,268/2,268)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038519)
HIX0038519
HIT000196161
(
M65105
)
(Sodium-dependent noradrenaline transporter; Norepinephrine transporter; NET; Solute carrier family 6 member 2;)
genome : 55,690,553 - 55,736,319 (45,767)
query : 7 - 1,975 (1,969/1,983)
14 exons
identity = 0.999
5'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.993
InterPro :
IPR000175 : Sodium:neurotransmitter symporter
IPR002435 : Sodium:neurotransmitter symporter, noradrenaline
GO :
0005328 : Molecular Function : neurotransmitter:sodium symporter activity
0005887 : Cellular Component : integral component of plasma membrane
0006836 : Biological Process : neurotransmitter transport
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038519)
HIX0038519
HIT000103437 (
ENST00000219833
)
(Sodium-dependent noradrenaline transporter isoform 1.)
genome : 55,690,556 - 55,740,104 (49,549)
query : 1 - 2,858 (2,858/2,858)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038519)
HIX0038519
HIT000654927 (
NM_001172504
)
(Sodium-dependent noradrenaline transporter isoform 1.)
genome : 55,690,556 - 55,740,104 (49,549)
query : 1 - 2,858 (2,858/2,858)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038519)
HIX0038519
HIT000679210 (
ENST00000566163
)
(Sodium-dependent noradrenaline transporter; Norepinephrine transporter; NET; Solute carrier family 6 member 2;)
genome : 55,690,567 - 55,736,258 (45,692)
query : 1 - 1,759 (1,759/1,759)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038519)
HIX0038519
HIT000095585
(
BC039309
)
(Sodium-dependent noradrenaline transporter; Norepinephrine transporter; NET; Solute carrier family 6 member 2;)
genome : 55,705,583 - 55,737,699 (32,117)
query : 1 - 3,157 (3,157/3,177)
12 exons
identity = 0.998
5'(0.996;1.000;1.000;1.000;1.000;1.000;0.992;
1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR000175 : Sodium:neurotransmitter symporter
GO :
0005328 : Molecular Function : neurotransmitter:sodium symporter activity
0006836 : Biological Process : neurotransmitter transport
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038519)
HIX0038519
HIT000680254 (
ENST00000567238
)
(Sodium-dependent noradrenaline transporter isoform 3.)
genome : 55,705,583 - 55,737,703 (32,121)
query : 1 - 3,160 (3,160/3,160)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038519)
HIX0038519
HIT000654926 (
NM_001172502
)
(Sodium-dependent noradrenaline transporter isoform 3.)
genome : 55,705,583 - 55,737,700 (32,118)
query : 1 - 3,157 (3,157/3,157)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038519)
HIX0038519
HIT000496435
(
AK301811
)
(Sodium-dependent noradrenaline transporter isoform 3.)
genome : 55,705,623 - 55,736,443 (30,821)
query : 1 - 1,860 (1,860/1,860)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000175 : Sodium:neurotransmitter symporter
IPR002435 : Sodium:neurotransmitter symporter, noradrenaline
GO :
0005328 : Molecular Function : neurotransmitter:sodium symporter activity
0005887 : Cellular Component : integral component of plasma membrane
0006836 : Biological Process : neurotransmitter transport
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038519)
HIX0038519
HIT000085842
(
BC000563
)
(Sodium-dependent noradrenaline transporter; Norepinephrine transporter; NET; Solute carrier family 6 member 2;)
genome : 55,719,151 - 55,736,660 (17,510)
query : 1 - 1,381 (1,381/1,402)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.992;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000175 : Sodium:neurotransmitter symporter
GO :
0005328 : Molecular Function : neurotransmitter:sodium symporter activity
0006836 : Biological Process : neurotransmitter transport
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038519)
HIX0038519
HIT000429276
(
AK310410
)
(Sodium-dependent noradrenaline transporter; Norepinephrine transporter; NET; Solute carrier family 6 member 2;)
genome : 55,733,520 - 55,737,088 (3,569)
query : 1 - 975 (975/975)
3 exons
identity = 0.997
5'(1.000;1.000;0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto 6, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038519)
HIX0038519
HIT000687187 (
ENST00000574918
)
(Sodium-dependent noradrenaline transporter isoform 1.)
genome : 55,734,186 - 55,739,765 (5,580)
query : 1 - 743 (743/743)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 5, cyto_nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038519)
HIX0038519
HIT000058756
(
AB022846
)
(Sodium-dependent noradrenaline transporter; Norepinephrine transporter; NET; Solute carrier family 6 member 2;)
genome : 55,734,186 - 55,736,673 (2,488)
query : 1 - 545 (545/568)
3 exons
identity = 0.994
5'(1.000;1.000;0.993)3'
coverage = 0.960
InterPro :
IPR000175 : Sodium:neurotransmitter symporter
GO :
0005328 : Molecular Function : neurotransmitter:sodium symporter activity
0006836 : Biological Process : neurotransmitter transport
0016021 : Cellular Component : integral component of membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 12, extr 11, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038519)
HIX0212261
HIT000658929 (
NR_033740
)
(Carboxylesterase, type B domain containing protein.)
genome : 55,758,837 - 55,784,123 (25,287)
query : 1 - 1,595 (1,595/1,595)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 15, cyto 13
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212261)
HIX0212261
HIT000679503 (
ENST00000566467
)
(Carboxylesterase, type B domain containing protein.)
genome : 55,762,027 - 55,784,023 (21,997)
query : 1 - 1,242 (1,242/1,242)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 15, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212261)
HIX0038544
HIT000519540 (
ENST00000421606
)
(Putative inactive carboxylesterase 4; Inactive carboxylesterase 1 pseudogene 1; Placental carboxylesterase 3; PCE-3; Precursor;)
genome : 55,794,460 - 55,828,070 (33,611)
query : 1 - 1,996 (1,996/1,996)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
E.R. 11.5, E.R._mito 9.16667, cyto 7.5,
cyto_mito 7.16667, mito 5.5, mito_pero 4.16667, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038544)
HIX0038544
HIT000686420 (
ENST00000574030
)
(Putative inactive carboxylesterase 4; Inactive carboxylesterase 1 pseudogene 1; Placental carboxylesterase 3; PCE-3; Precursor;)
genome : 55,794,478 - 55,807,423 (12,946)
query : 1 - 877 (877/877)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, cyto 12.5, cysk 9, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038544)
HIX0038544
HIT000688777 (
ENST00000576766
)
(Liver carboxylesterase 1; Acyl-coenzyme A:cholesterol acyltransferase; ACAT; Brain carboxylesterase hBr1; Carboxylesterase 1; CE-1; hCE-1; EC=3.1.1.1; Cocaine carboxylesterase; Egasyn; HMSE; Methylumbelliferyl-acetate deacetylase 1; EC=3.1.1.56; Monocyte/macrophage serine esterase; Retinyl ester hydrolase; REH; Serine esterase 1; Triacylglycerol hydrolase; TGH; Precursor;)
genome : 55,794,505 - 55,807,466 (12,962)
query : 1 - 540 (540/540)
4 exons
identity = 0.989
5'(1.000;0.993;0.968;1.000)3'
coverage = 1.000
EC number :
EC 3.1.1.1
,
EC 3.1.1.56
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 8.5, extr 8, cyto_nucl 8, cyto 7.5,
cyto_pero 6.16667, nucl 6, E.R._mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038544)
HIX0038544
HIT000390601
(
BC131699
)
(Putative inactive carboxylesterase 4; Inactive carboxylesterase 1 pseudogene 1; Placental carboxylesterase 3; PCE-3; Precursor;)
genome : 55,794,513 - 55,807,833 (13,321)
query : 4 - 1,047 (1,044/1,047)
5 exons
identity = 0.993
5'(1.000;1.000;0.993;0.987;0.992)3'
coverage = 0.997
InterPro :
IPR002018 : Carboxylesterase, type B
IPR019826 : Carboxylesterase type B, active site
IPR029058 : Alpha/Beta hydrolase fold
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, nucl 9, mito 7, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038544)
HIX0038544
HIT000069493
(
AF106005
)
Representative transcript
(Putative inactive carboxylesterase 4; Inactive carboxylesterase 1 pseudogene 1; Placental carboxylesterase 3; PCE-3; Precursor;)
genome : 55,794,511 - 55,808,825 (14,315)
query : 1 - 2,251 (2,251/2,270)
6 exons
identity = 0.984
5'(0.989;0.947;0.960;0.993;0.994;0.989)3'
coverage = 1.000
InterPro :
IPR002018 : Carboxylesterase, type B
IPR019819 : Carboxylesterase type B, conserved site
IPR019826 : Carboxylesterase type B, active site
IPR029058 : Alpha/Beta hydrolase fold
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, pero 4, lyso 3, plas 2, E.R. 2, cyto_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038544)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB010633
Canis
sp. (Dog) : AB023629
Mus
sp. (Mouse) : AF378751
Mus
sp. (Mouse) : AK144549
Bos
sp. (Cow) : BC105548
Gallus
sp. (Chicken) : BX934906
Monodelphis
sp. (Opossum) : ENSMODT00000031499
Oryzias
sp. (Medaka) : ENSORLT00000014575
Takifugu
sp. (Fugu) : SINFRUT00000180773
Rattus
sp. (Rat) : XM_001054575
Equus
sp. (Horse) : XM_001915473
Pan
sp. (Chimpanzee) : XR_023475
HIX0038544
HIT000398520 (
NR_003276
)
(Putative inactive carboxylesterase 4; Inactive carboxylesterase 1 pseudogene 1; Placental carboxylesterase 3; PCE-3; Precursor;)
genome : 55,794,511 - 55,808,825 (14,315)
query : 1 - 2,246 (2,246/2,259)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11.5, nucl 9.5, mito 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038544)
HIX0038544
HIT000684110 (
ENST00000571348
)
(Putative inactive carboxylesterase 4; Inactive carboxylesterase 1 pseudogene 1; Placental carboxylesterase 3; PCE-3; Precursor;)
genome : 55,794,511 - 55,808,825 (14,315)
query : 1 - 2,246 (2,246/2,259)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11.5, nucl 9.5, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038544)
HIX0038544
HIT000686140 (
ENST00000573705
)
(Putative inactive carboxylesterase 4; Inactive carboxylesterase 1 pseudogene 1; Placental carboxylesterase 3; PCE-3; Precursor;)
genome : 55,794,513 - 55,807,833 (13,321)
query : 1 - 1,044 (1,044/1,044)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11.5, nucl 9.5, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038544)
HIX0038544
HIT000525118 (
ENST00000427184
)
(Liver carboxylesterase 1; Acyl-coenzyme A:cholesterol acyltransferase; ACAT; Brain carboxylesterase hBr1; Carboxylesterase 1; CE-1; hCE-1; EC=3.1.1.1; Cocaine carboxylesterase; Egasyn; HMSE; Methylumbelliferyl-acetate deacetylase 1; EC=3.1.1.56; Monocyte/macrophage serine esterase; Retinyl ester hydrolase; REH; Serine esterase 1; Triacylglycerol hydrolase; TGH; Precursor;)
genome : 55,817,523 - 55,828,067 (10,545)
query : 1 - 945 (945/945)
6 exons
identity = 0.997
5'(1.000;0.964;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.1.1.1
,
EC 3.1.1.56
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
SOSUI :
SOLUBLE PROTEIN
PSORT :
E.R. 13, extr 9, cyto_mito 3, cyto 2.5, mito 2.5,
pero 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038544)
HIX0013044
HIT000339505
(
BC110338
)
(Liver carboxylesterase 1; Acyl-coenzyme A:cholesterol acyltransferase; ACAT; Brain carboxylesterase hBr1; Carboxylesterase 1; CE-1; hCE-1; EC=3.1.1.1; Cocaine carboxylesterase; Egasyn; HMSE; Methylumbelliferyl-acetate deacetylase 1; EC=3.1.1.56; Monocyte/macrophage serine esterase; Retinyl ester hydrolase; REH; Serine esterase 1; Triacylglycerol hydrolase; TGH; Precursor;)
genome : 55,836,765 - 55,867,017 (30,253)
query : 1 - 1,950 (1,950/1,985)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.1
,
EC 3.1.1.56
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
InterPro :
IPR002018 : Carboxylesterase, type B
IPR019819 : Carboxylesterase type B, conserved site
IPR019826 : Carboxylesterase type B, active site
IPR029058 : Alpha/Beta hydrolase fold
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, E.R. 8, pero 4, E.R._golg 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013044)
HIX0013044
HIT000087363
(
BC009706
)
(Liver carboxylesterase 1; Acyl-coenzyme A:cholesterol acyltransferase; ACAT; Brain carboxylesterase hBr1; Carboxylesterase 1; CE-1; hCE-1; EC=3.1.1.1; Cocaine carboxylesterase; Egasyn; HMSE; Methylumbelliferyl-acetate deacetylase 1; EC=3.1.1.56; Monocyte/macrophage serine esterase; Retinyl ester hydrolase; REH; Serine esterase 1; Triacylglycerol hydrolase; TGH; Precursor;)
genome : 55,836,765 - 55,867,009 (30,245)
query : 1 - 1,749 (1,749/1,771)
13 exons
identity = 0.994
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.991;1.000;1.000;1.000;0.904)5'
coverage = 1.000
EC number :
EC 3.1.1.1
,
EC 3.1.1.56
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
InterPro :
IPR002018 : Carboxylesterase, type B
IPR019826 : Carboxylesterase type B, active site
IPR029058 : Alpha/Beta hydrolase fold
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_mito 10.1667, cyto_nucl 9.83333, mito 5,
nucl 4.5, plas 4, mito_pero 3.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013044)
HIX0013044
HIT000072728
(
AF177775
)
(Liver carboxylesterase 1; Acyl-coenzyme A:cholesterol acyltransferase; ACAT; Brain carboxylesterase hBr1; Carboxylesterase 1; CE-1; hCE-1; EC=3.1.1.1; Cocaine carboxylesterase; Egasyn; HMSE; Methylumbelliferyl-acetate deacetylase 1; EC=3.1.1.56; Monocyte/macrophage serine esterase; Retinyl ester hydrolase; REH; Serine esterase 1; Triacylglycerol hydrolase; TGH; Precursor;)
genome : 55,836,765 - 55,866,995 (30,231)
query : 1 - 1,927 (1,927/1,944)
14 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.975)5'
coverage = 1.000
EC number :
EC 3.1.1.1
,
EC 3.1.1.56
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
InterPro :
IPR002018 : Carboxylesterase, type B
IPR019819 : Carboxylesterase type B, conserved site
IPR019826 : Carboxylesterase type B, active site
IPR029058 : Alpha/Beta hydrolase fold
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, E.R. 8, pero 4, E.R._golg 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013044)
HIX0013044
HIT000198261 (
NM_001266
)
(Liver carboxylesterase 1; Acyl-coenzyme A:cholesterol acyltransferase; ACAT; Brain carboxylesterase hBr1; Carboxylesterase 1; CE-1; hCE-1; EC=3.1.1.1; Cocaine carboxylesterase; Egasyn; HMSE; Methylumbelliferyl-acetate deacetylase 1; EC=3.1.1.56; Monocyte/macrophage serine esterase; Retinyl ester hydrolase; REH; Serine esterase 1; Triacylglycerol hydrolase; TGH; Precursor;)
genome : 55,836,765 - 55,867,075 (30,311)
query : 1 - 2,005 (2,005/2,021)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.1
,
EC 3.1.1.56
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, E.R. 8, pero 4, E.R._golg 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013044)
HIX0013044
HIT000365799 (
NM_001025194
)
(Liver carboxylesterase 1; Acyl-coenzyme A:cholesterol acyltransferase; ACAT; Brain carboxylesterase hBr1; Carboxylesterase 1; CE-1; hCE-1; EC=3.1.1.1; Cocaine carboxylesterase; Egasyn; HMSE; Methylumbelliferyl-acetate deacetylase 1; EC=3.1.1.56; Monocyte/macrophage serine esterase; Retinyl ester hydrolase; REH; Serine esterase 1; Triacylglycerol hydrolase; TGH; Precursor;)
genome : 55,836,765 - 55,867,075 (30,311)
query : 1 - 2,008 (2,008/2,024)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.1
,
EC 3.1.1.56
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, E.R. 8, pero 4, E.R._golg 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013044)
HIX0013044
HIT000365800 (
NM_001025195
)
(Liver carboxylesterase 1; Acyl-coenzyme A:cholesterol acyltransferase; ACAT; Brain carboxylesterase hBr1; Carboxylesterase 1; CE-1; hCE-1; EC=3.1.1.1; Cocaine carboxylesterase; Egasyn; HMSE; Methylumbelliferyl-acetate deacetylase 1; EC=3.1.1.56; Monocyte/macrophage serine esterase; Retinyl ester hydrolase; REH; Serine esterase 1; Triacylglycerol hydrolase; TGH; Precursor;)
genome : 55,836,765 - 55,867,075 (30,311)
query : 1 - 2,011 (2,011/2,027)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.1
,
EC 3.1.1.56
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, E.R. 9, pero 4, mito 2, lyso 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013044)
HIX0013044
HIT000035806
(
BC012418
)
(Liver carboxylesterase 1; Acyl-coenzyme A:cholesterol acyltransferase; ACAT; Brain carboxylesterase hBr1; Carboxylesterase 1; CE-1; hCE-1; EC=3.1.1.1; Cocaine carboxylesterase; Egasyn; HMSE; Methylumbelliferyl-acetate deacetylase 1; EC=3.1.1.56; Monocyte/macrophage serine esterase; Retinyl ester hydrolase; REH; Serine esterase 1; Triacylglycerol hydrolase; TGH; Precursor;)
genome : 55,836,765 - 55,867,029 (30,265)
query : 1 - 1,959 (1,959/1,975)
14 exons
identity = 0.994
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.991;1.000;1.000;1.000;1.000;0.912)5'
coverage = 1.000
EC number :
EC 3.1.1.1
,
EC 3.1.1.56
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
InterPro :
IPR002018 : Carboxylesterase, type B
IPR019819 : Carboxylesterase type B, conserved site
IPR019826 : Carboxylesterase type B, active site
IPR029058 : Alpha/Beta hydrolase fold
SOSUI :
SOLUBLE PROTEIN
PSORT :
E.R. 16, extr 9, pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013044)
HIX0013044
HIT000085666
(
AY268104
)
(Liver carboxylesterase 1; Acyl-coenzyme A:cholesterol acyltransferase; ACAT; Brain carboxylesterase hBr1; Carboxylesterase 1; CE-1; hCE-1; EC=3.1.1.1; Cocaine carboxylesterase; Egasyn; HMSE; Methylumbelliferyl-acetate deacetylase 1; EC=3.1.1.56; Monocyte/macrophage serine esterase; Retinyl ester hydrolase; REH; Serine esterase 1; Triacylglycerol hydrolase; TGH; Precursor;)
genome : 55,836,763 - 55,867,012 (30,250)
query : 1 - 1,943 (1,943/1,947)
14 exons
identity = 0.995
3'(0.987;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.993;0.995;0.979)5'
coverage = 0.998
EC number :
EC 3.1.1.1
,
EC 3.1.1.56
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
InterPro :
IPR002018 : Carboxylesterase, type B
IPR019819 : Carboxylesterase type B, conserved site
IPR019826 : Carboxylesterase type B, active site
IPR029058 : Alpha/Beta hydrolase fold
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, E.R. 8, pero 4, E.R._golg 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013044)
HIX0013044
HIT000195787
(
M55509
)
(Liver carboxylesterase 1; Acyl-coenzyme A:cholesterol acyltransferase; ACAT; Brain carboxylesterase hBr1; Carboxylesterase 1; CE-1; hCE-1; EC=3.1.1.1; Cocaine carboxylesterase; Egasyn; HMSE; Methylumbelliferyl-acetate deacetylase 1; EC=3.1.1.56; Monocyte/macrophage serine esterase; Retinyl ester hydrolase; REH; Serine esterase 1; Triacylglycerol hydrolase; TGH; Precursor;)
genome : 55,836,763 - 55,862,755 (25,993)
query : 1 - 1,722 (1,722/1,725)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
EC number :
EC 3.1.1.1
,
EC 3.1.1.56
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
InterPro :
IPR002018 : Carboxylesterase, type B
IPR019819 : Carboxylesterase type B, conserved site
IPR019826 : Carboxylesterase type B, active site
IPR029058 : Alpha/Beta hydrolase fold
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 10, cyto 7.5, cyto_nucl 6, mito 4.5,
mito_pero 4.5, nucl 3.5, pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013044)
HIX0013044
HIT000191858
(
L07765
)
(Liver carboxylesterase 1; Acyl-coenzyme A:cholesterol acyltransferase; ACAT; Brain carboxylesterase hBr1; Carboxylesterase 1; CE-1; hCE-1; EC=3.1.1.1; Cocaine carboxylesterase; Egasyn; HMSE; Methylumbelliferyl-acetate deacetylase 1; EC=3.1.1.56; Monocyte/macrophage serine esterase; Retinyl ester hydrolase; REH; Serine esterase 1; Triacylglycerol hydrolase; TGH; Precursor;)
genome : 55,836,765 - 55,866,990 (30,226)
query : 45 - 1,964 (1,920/1,966)
14 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.995;1.000)5'
coverage = 0.977
EC number :
EC 3.1.1.1
,
EC 3.1.1.56
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
InterPro :
IPR002018 : Carboxylesterase, type B
IPR019819 : Carboxylesterase type B, conserved site
IPR019826 : Carboxylesterase type B, active site
IPR029058 : Alpha/Beta hydrolase fold
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, E.R. 8, pero 4, E.R._golg 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013044)
HIX0013044
HIT000191857
(
L07764
)
(Liver carboxylesterase 1; Acyl-coenzyme A:cholesterol acyltransferase; ACAT; Brain carboxylesterase hBr1; Carboxylesterase 1; CE-1; hCE-1; EC=3.1.1.1; Cocaine carboxylesterase; Egasyn; HMSE; Methylumbelliferyl-acetate deacetylase 1; EC=3.1.1.56; Monocyte/macrophage serine esterase; Retinyl ester hydrolase; REH; Serine esterase 1; Triacylglycerol hydrolase; TGH; Precursor;)
genome : 55,836,765 - 55,867,012 (30,248)
query : 1 - 1,948 (1,948/1,950)
14 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.995;1.000)5'
coverage = 0.999
EC number :
EC 3.1.1.1
,
EC 3.1.1.56
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
InterPro :
IPR002018 : Carboxylesterase, type B
IPR019819 : Carboxylesterase type B, conserved site
IPR019826 : Carboxylesterase type B, active site
IPR029058 : Alpha/Beta hydrolase fold
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, E.R. 9, pero 4, mito 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013044)
HIX0013044
HIT000675179 (
ENST00000561966
)
(Liver carboxylesterase 1; Acyl-coenzyme A:cholesterol acyltransferase; ACAT; Brain carboxylesterase hBr1; Carboxylesterase 1; CE-1; hCE-1; EC=3.1.1.1; Cocaine carboxylesterase; Egasyn; HMSE; Methylumbelliferyl-acetate deacetylase 1; EC=3.1.1.56; Monocyte/macrophage serine esterase; Retinyl ester hydrolase; REH; Serine esterase 1; Triacylglycerol hydrolase; TGH; Precursor;)
genome : 55,836,763 - 55,846,886 (10,124)
query : 1 - 659 (659/659)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.1
,
EC 3.1.1.56
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 14, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013044)
HIX0013044
HIT000678641 (
ENST00000565568
)
(Liver carboxylesterase 1; Acyl-coenzyme A:cholesterol acyltransferase; ACAT; Brain carboxylesterase hBr1; Carboxylesterase 1; CE-1; hCE-1; EC=3.1.1.1; Cocaine carboxylesterase; Egasyn; HMSE; Methylumbelliferyl-acetate deacetylase 1; EC=3.1.1.56; Monocyte/macrophage serine esterase; Retinyl ester hydrolase; REH; Serine esterase 1; Triacylglycerol hydrolase; TGH; Precursor;)
genome : 55,836,763 - 55,846,886 (10,124)
query : 1 - 659 (659/659)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.1
,
EC 3.1.1.56
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 14, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013044)
HIX0013044
HIT000313896 (
ENST00000360526
)
(Liver carboxylesterase 1; Acyl-coenzyme A:cholesterol acyltransferase; ACAT; Brain carboxylesterase hBr1; Carboxylesterase 1; CE-1; hCE-1; EC=3.1.1.1; Cocaine carboxylesterase; Egasyn; HMSE; Methylumbelliferyl-acetate deacetylase 1; EC=3.1.1.56; Monocyte/macrophage serine esterase; Retinyl ester hydrolase; REH; Serine esterase 1; Triacylglycerol hydrolase; TGH; Precursor;)
genome : 55,836,765 - 55,867,070 (30,306)
query : 1 - 2,006 (2,006/2,006)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.1
,
EC 3.1.1.56
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, E.R. 9, pero 4, mito 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013044)
HIX0013044
HIT000519980 (
ENST00000422046
)
(Liver carboxylesterase 1; Acyl-coenzyme A:cholesterol acyltransferase; ACAT; Brain carboxylesterase hBr1; Carboxylesterase 1; CE-1; hCE-1; EC=3.1.1.1; Cocaine carboxylesterase; Egasyn; HMSE; Methylumbelliferyl-acetate deacetylase 1; EC=3.1.1.56; Monocyte/macrophage serine esterase; Retinyl ester hydrolase; REH; Serine esterase 1; Triacylglycerol hydrolase; TGH; Precursor;)
genome : 55,836,766 - 55,867,249 (30,484)
query : 1 - 2,178 (2,178/2,178)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.1
,
EC 3.1.1.56
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, E.R. 8, pero 4, E.R._golg 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013044)
HIX0013044
HIT000423420
(
AK290623
)
(Liver carboxylesterase 1; Acyl-coenzyme A:cholesterol acyltransferase; ACAT; Brain carboxylesterase hBr1; Carboxylesterase 1; CE-1; hCE-1; EC=3.1.1.1; Cocaine carboxylesterase; Egasyn; HMSE; Methylumbelliferyl-acetate deacetylase 1; EC=3.1.1.56; Monocyte/macrophage serine esterase; Retinyl ester hydrolase; REH; Serine esterase 1; Triacylglycerol hydrolase; TGH; Precursor;)
genome : 55,836,766 - 55,867,062 (30,297)
query : 1 - 1,991 (1,991/1,991)
14 exons
identity = 0.994
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.991;1.000;1.000;1.000;1.000;0.925)5'
coverage = 1.000
EC number :
EC 3.1.1.1
,
EC 3.1.1.56
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
InterPro :
IPR002018 : Carboxylesterase, type B
IPR019819 : Carboxylesterase type B, conserved site
IPR019826 : Carboxylesterase type B, active site
IPR029058 : Alpha/Beta hydrolase fold
SOSUI :
SOLUBLE PROTEIN
PSORT :
E.R. 16, extr 9, pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013044)
HIX0013044
HIT000425006
(
AK292209
)
(Liver carboxylesterase 1; Acyl-coenzyme A:cholesterol acyltransferase; ACAT; Brain carboxylesterase hBr1; Carboxylesterase 1; CE-1; hCE-1; EC=3.1.1.1; Cocaine carboxylesterase; Egasyn; HMSE; Methylumbelliferyl-acetate deacetylase 1; EC=3.1.1.56; Monocyte/macrophage serine esterase; Retinyl ester hydrolase; REH; Serine esterase 1; Triacylglycerol hydrolase; TGH; Precursor;)
genome : 55,836,766 - 55,867,062 (30,297)
query : 1 - 1,997 (1,997/1,997)
14 exons
identity = 0.994
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.925)5'
coverage = 1.000
EC number :
EC 3.1.1.1
,
EC 3.1.1.56
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
InterPro :
IPR002018 : Carboxylesterase, type B
IPR019819 : Carboxylesterase type B, conserved site
IPR019826 : Carboxylesterase type B, active site
IPR029058 : Alpha/Beta hydrolase fold
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 15, extr 9, pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013044)
HIX0013044
HIT000686843 (
ENST00000574513
)
(Liver carboxylesterase 1; Acyl-coenzyme A:cholesterol acyltransferase; ACAT; Brain carboxylesterase hBr1; Carboxylesterase 1; CE-1; hCE-1; EC=3.1.1.1; Cocaine carboxylesterase; Egasyn; HMSE; Methylumbelliferyl-acetate deacetylase 1; EC=3.1.1.56; Monocyte/macrophage serine esterase; Retinyl ester hydrolase; REH; Serine esterase 1; Triacylglycerol hydrolase; TGH; Precursor;)
genome : 55,836,766 - 55,867,062 (30,297)
query : 1 - 1,997 (1,997/1,997)
14 exons
identity = 0.994
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.925)5'
coverage = 1.000
EC number :
EC 3.1.1.1
,
EC 3.1.1.56
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 15, extr 9, pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013044)
HIX0013044
HIT000688794 (
ENST00000576783
)
(Liver carboxylesterase 1; Acyl-coenzyme A:cholesterol acyltransferase; ACAT; Brain carboxylesterase hBr1; Carboxylesterase 1; CE-1; hCE-1; EC=3.1.1.1; Cocaine carboxylesterase; Egasyn; HMSE; Methylumbelliferyl-acetate deacetylase 1; EC=3.1.1.56; Monocyte/macrophage serine esterase; Retinyl ester hydrolase; REH; Serine esterase 1; Triacylglycerol hydrolase; TGH; Precursor;)
genome : 55,836,766 - 55,867,062 (30,297)
query : 1 - 1,991 (1,991/1,991)
14 exons
identity = 0.994
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.925)5'
coverage = 1.000
EC number :
EC 3.1.1.1
,
EC 3.1.1.56
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
SOSUI :
SOLUBLE PROTEIN
PSORT :
E.R. 16, extr 9, pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013044)
HIX0013044
HIT000242405
(
AB119995
)
Representative transcript
(Liver carboxylesterase 1; Acyl-coenzyme A:cholesterol acyltransferase; ACAT; Brain carboxylesterase hBr1; Carboxylesterase 1; CE-1; hCE-1; EC=3.1.1.1; Cocaine carboxylesterase; Egasyn; HMSE; Methylumbelliferyl-acetate deacetylase 1; EC=3.1.1.56; Monocyte/macrophage serine esterase; Retinyl ester hydrolase; REH; Serine esterase 1; Triacylglycerol hydrolase; TGH; Precursor;)
genome : 55,836,766 - 55,867,028 (30,263)
query : 1 - 1,960 (1,960/1,960)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.1
,
EC 3.1.1.56
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
InterPro :
IPR002018 : Carboxylesterase, type B
IPR019819 : Carboxylesterase type B, conserved site
IPR019826 : Carboxylesterase type B, active site
IPR029058 : Alpha/Beta hydrolase fold
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, E.R. 8, pero 4, E.R._golg 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013044)
Ortholog candidate ( ->
Evola
)
Canis
sp. (Dog) : AB023629
Rattus
sp. (Rat) : BC061789
Mus
sp. (Mouse) : BC089371
Danio
sp. (Zebrafish) : BC091470
Bos
sp. (Cow) : BC102781
Gallus
sp. (Chicken) : BX934906
Tetraodon
sp. (Tetraodon) : CR637401
Pongo
sp. (Orangutan) : CR861029
Monodelphis
sp. (Opossum) : ENSMODT00000031485
Monodelphis
sp. (Opossum) : ENSMODT00000031499
Oryzias
sp. (Medaka) : ENSORLT00000014575
Pan
sp. (Chimpanzee) : ENSPTRT00000047603
Takifugu
sp. (Fugu) : SINFRUT00000180773
Equus
sp. (Horse) : XM_001490958
Equus
sp. (Horse) : XM_001491526
HIX0013044
HIT000242406
(
AB119996
)
(Liver carboxylesterase 1; Acyl-coenzyme A:cholesterol acyltransferase; ACAT; Brain carboxylesterase hBr1; Carboxylesterase 1; CE-1; hCE-1; EC=3.1.1.1; Cocaine carboxylesterase; Egasyn; HMSE; Methylumbelliferyl-acetate deacetylase 1; EC=3.1.1.56; Monocyte/macrophage serine esterase; Retinyl ester hydrolase; REH; Serine esterase 1; Triacylglycerol hydrolase; TGH; Precursor;)
genome : 55,836,766 - 55,867,026 (30,261)
query : 1 - 1,958 (1,958/1,958)
14 exons
identity = 0.995
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.910)5'
coverage = 1.000
EC number :
EC 3.1.1.1
,
EC 3.1.1.56
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
InterPro :
IPR002018 : Carboxylesterase, type B
IPR019819 : Carboxylesterase type B, conserved site
IPR019826 : Carboxylesterase type B, active site
IPR029058 : Alpha/Beta hydrolase fold
SOSUI :
SOLUBLE PROTEIN
PSORT :
E.R. 16, extr 9, pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013044)
HIX0013044
HIT000684607 (
ENST00000571922
)
(Liver carboxylesterase 1; Acyl-coenzyme A:cholesterol acyltransferase; ACAT; Brain carboxylesterase hBr1; Carboxylesterase 1; CE-1; hCE-1; EC=3.1.1.1; Cocaine carboxylesterase; Egasyn; HMSE; Methylumbelliferyl-acetate deacetylase 1; EC=3.1.1.56; Monocyte/macrophage serine esterase; Retinyl ester hydrolase; REH; Serine esterase 1; Triacylglycerol hydrolase; TGH; Precursor;)
genome : 55,836,766 - 55,867,026 (30,261)
query : 1 - 1,958 (1,958/1,958)
14 exons
identity = 0.995
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.910)5'
coverage = 1.000
EC number :
EC 3.1.1.1
,
EC 3.1.1.56
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
SOSUI :
SOLUBLE PROTEIN
PSORT :
E.R. 16, extr 9, pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013044)
HIX0013044
HIT000496275
(
AK301651
)
(Carboxylesterase 1D; Carboxyesterase ES-10; Carboxylesterase 3; EC=3.1.1.1; EC=3.1.1.67; ES-HVEL; Fatty acid ethyl ester synthase; FAEE synthase; Liver carboxylesterase 10; pI 6.1 esterase; Precursor;)
genome : 55,836,766 - 55,866,974 (30,209)
query : 1 - 1,814 (1,814/1,814)
13 exons
identity = 0.982
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.877;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.1
,
EC 3.1.1.67
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
InterPro :
IPR002018 : Carboxylesterase, type B
IPR019826 : Carboxylesterase type B, active site
IPR029058 : Alpha/Beta hydrolase fold
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 9, cyto_mito 9, E.R._mito 8.83333, cyto 7.5,
extr 6, E.R. 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013044)
HIX0013044
HIT000321813
(
X52973
)
(Liver carboxylesterase 1; Acyl-coenzyme A:cholesterol acyltransferase; ACAT; Brain carboxylesterase hBr1; Carboxylesterase 1; CE-1; hCE-1; EC=3.1.1.1; Cocaine carboxylesterase; Egasyn; HMSE; Methylumbelliferyl-acetate deacetylase 1; EC=3.1.1.56; Monocyte/macrophage serine esterase; Retinyl ester hydrolase; REH; Serine esterase 1; Triacylglycerol hydrolase; TGH; Precursor;)
genome : 55,836,766 - 55,862,745 (25,980)
query : 2 - 1,707 (1,706/1,707)
13 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.994;1.000;1.000;1.000)5'
coverage = 0.999
EC number :
EC 3.1.1.1
,
EC 3.1.1.56
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
InterPro :
IPR002018 : Carboxylesterase, type B
IPR019819 : Carboxylesterase type B, conserved site
IPR019826 : Carboxylesterase type B, active site
IPR029058 : Alpha/Beta hydrolase fold
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 12, cyto 9, nucl 4, mito 4, mito_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013044)
HIX0013044
HIT000196175
(
M65261
)
(Carboxylesterase, type B domain containing protein.)
genome : 55,836,766 - 55,860,127 (23,362)
query : 1 - 1,568 (1,568/1,568)
12 exons
identity = 0.975
3'(0.934;1.000;1.000;0.987;0.988;0.979;0.974;
0.954;1.000;1.000;1.000;0.969)5'
coverage = 1.000
EC number :
EC 3.1.1.1
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
InterPro :
IPR002018 : Carboxylesterase, type B
IPR029058 : Alpha/Beta hydrolase fold
SOSUI :
SOLUBLE PROTEIN
PSORT :
E.R. 12, E.R._mito 9, extr 8, mito 4, pero 4,
extr_plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013044)
HIX0013044
HIT000688275 (
ENST00000576185
)
(Liver carboxylesterase 1; Acyl-coenzyme A:cholesterol acyltransferase; ACAT; Brain carboxylesterase hBr1; Carboxylesterase 1; CE-1; hCE-1; EC=3.1.1.1; Cocaine carboxylesterase; Egasyn; HMSE; Methylumbelliferyl-acetate deacetylase 1; EC=3.1.1.56; Monocyte/macrophage serine esterase; Retinyl ester hydrolase; REH; Serine esterase 1; Triacylglycerol hydrolase; TGH; Precursor;)
genome : 55,836,848 - 55,844,576 (7,729)
query : 1 - 518 (518/518)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.1
,
EC 3.1.1.56
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_mito 10.5, plas 3, nucl 3, E.R. 3,
mito 1.5, cysk_plas 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013044)
HIX0013044
HIT000676403 (
ENST00000563241
)
(Liver carboxylesterase 1; Acyl-coenzyme A:cholesterol acyltransferase; ACAT; Brain carboxylesterase hBr1; Carboxylesterase 1; CE-1; hCE-1; EC=3.1.1.1; Cocaine carboxylesterase; Egasyn; HMSE; Methylumbelliferyl-acetate deacetylase 1; EC=3.1.1.56; Monocyte/macrophage serine esterase; Retinyl ester hydrolase; REH; Serine esterase 1; Triacylglycerol hydrolase; TGH; Precursor;)
genome : 55,836,848 - 55,844,567 (7,720)
query : 1 - 509 (509/509)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.1
,
EC 3.1.1.56
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_mito 9.66667, mito_pero 4.83333,
E.R. 4, pero 4, mito 3.5, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013044)
HIX0013044
HIT000196269
(
M73499
)
(Liver carboxylesterase 1; Acyl-coenzyme A:cholesterol acyltransferase; ACAT; Brain carboxylesterase hBr1; Carboxylesterase 1; CE-1; hCE-1; EC=3.1.1.1; Cocaine carboxylesterase; Egasyn; HMSE; Methylumbelliferyl-acetate deacetylase 1; EC=3.1.1.56; Monocyte/macrophage serine esterase; Retinyl ester hydrolase; REH; Serine esterase 1; Triacylglycerol hydrolase; TGH; Precursor;)
genome : 55,836,928 - 55,866,989 (30,062)
query : 9 - 1,766 (1,758/1,766)
14 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.986)5'
coverage = 0.995
EC number :
EC 3.1.1.1
,
EC 3.1.1.56
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
InterPro :
IPR002018 : Carboxylesterase, type B
IPR019819 : Carboxylesterase type B, conserved site
IPR019826 : Carboxylesterase type B, active site
IPR029058 : Alpha/Beta hydrolase fold
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, E.R. 8, pero 4, E.R._golg 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013044)
HIX0013044
HIT000216491
(
S73751
)
(Liver carboxylesterase 1; Acyl-coenzyme A:cholesterol acyltransferase; ACAT; Brain carboxylesterase hBr1; Carboxylesterase 1; CE-1; hCE-1; EC=3.1.1.1; Cocaine carboxylesterase; Egasyn; HMSE; Methylumbelliferyl-acetate deacetylase 1; EC=3.1.1.56; Monocyte/macrophage serine esterase; Retinyl ester hydrolase; REH; Serine esterase 1; Triacylglycerol hydrolase; TGH; Precursor;)
genome : 55,836,928 - 55,866,989 (30,062)
query : 7 - 1,767 (1,761/1,767)
14 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.990;0.962)5'
coverage = 0.997
EC number :
EC 3.1.1.1
,
EC 3.1.1.56
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
InterPro :
IPR002018 : Carboxylesterase, type B
IPR019819 : Carboxylesterase type B, conserved site
IPR019826 : Carboxylesterase type B, active site
IPR029058 : Alpha/Beta hydrolase fold
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, E.R. 9, pero 4, mito 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013044)
HIX0013044
HIT000314765 (
ENST00000361503
)
(Liver carboxylesterase 1; Acyl-coenzyme A:cholesterol acyltransferase; ACAT; Brain carboxylesterase hBr1; Carboxylesterase 1; CE-1; hCE-1; EC=3.1.1.1; Cocaine carboxylesterase; Egasyn; HMSE; Methylumbelliferyl-acetate deacetylase 1; EC=3.1.1.56; Monocyte/macrophage serine esterase; Retinyl ester hydrolase; REH; Serine esterase 1; Triacylglycerol hydrolase; TGH; Precursor;)
genome : 55,836,961 - 55,867,098 (30,138)
query : 1 - 1,835 (1,835/1,835)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.1
,
EC 3.1.1.56
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, E.R. 8, pero 4, E.R._golg 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013044)
HIX0013044
HIT000688706 (
ENST00000576685
)
(Liver carboxylesterase 1; Acyl-coenzyme A:cholesterol acyltransferase; ACAT; Brain carboxylesterase hBr1; Carboxylesterase 1; CE-1; hCE-1; EC=3.1.1.1; Cocaine carboxylesterase; Egasyn; HMSE; Methylumbelliferyl-acetate deacetylase 1; EC=3.1.1.56; Monocyte/macrophage serine esterase; Retinyl ester hydrolase; REH; Serine esterase 1; Triacylglycerol hydrolase; TGH; Precursor;)
genome : 55,836,961 - 55,854,391 (17,431)
query : 1 - 1,014 (1,014/1,014)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.1
,
EC 3.1.1.56
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14.5, extr 14, E.R._mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013044)
HIX0013044
HIT000058807
(
AB025026
)
(Liver carboxylesterase 1; Acyl-coenzyme A:cholesterol acyltransferase; ACAT; Brain carboxylesterase hBr1; Carboxylesterase 1; CE-1; hCE-1; EC=3.1.1.1; Cocaine carboxylesterase; Egasyn; HMSE; Methylumbelliferyl-acetate deacetylase 1; EC=3.1.1.56; Monocyte/macrophage serine esterase; Retinyl ester hydrolase; REH; Serine esterase 1; Triacylglycerol hydrolase; TGH; Precursor;)
genome : 55,844,457 - 55,866,989 (22,533)
query : 1 - 1,309 (1,309/1,309)
11 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.986)5'
coverage = 1.000
EC number :
EC 3.1.1.1
,
EC 3.1.1.56
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
InterPro :
IPR002018 : Carboxylesterase, type B
IPR019819 : Carboxylesterase type B, conserved site
IPR019826 : Carboxylesterase type B, active site
IPR029058 : Alpha/Beta hydrolase fold
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, pero 4, extr 3, E.R. 2, lyso 2, cyto_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013044)
HIX0013044
HIT000682205 (
ENST00000569260
)
(Liver carboxylesterase 1; Acyl-coenzyme A:cholesterol acyltransferase; ACAT; Brain carboxylesterase hBr1; Carboxylesterase 1; CE-1; hCE-1; EC=3.1.1.1; Cocaine carboxylesterase; Egasyn; HMSE; Methylumbelliferyl-acetate deacetylase 1; EC=3.1.1.56; Monocyte/macrophage serine esterase; Retinyl ester hydrolase; REH; Serine esterase 1; Triacylglycerol hydrolase; TGH; Precursor;)
genome : 55,844,483 - 55,853,492 (9,010)
query : 1 - 499 (499/499)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.1
,
EC 3.1.1.56
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.1667, cyto 13.5, cyto_plas 8.83333,
nucl 7.5, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013044)
HIX0013044
HIT000686602 (
ENST00000574235
)
(Liver carboxylesterase 1; Acyl-coenzyme A:cholesterol acyltransferase; ACAT; Brain carboxylesterase hBr1; Carboxylesterase 1; CE-1; hCE-1; EC=3.1.1.1; Cocaine carboxylesterase; Egasyn; HMSE; Methylumbelliferyl-acetate deacetylase 1; EC=3.1.1.56; Monocyte/macrophage serine esterase; Retinyl ester hydrolase; REH; Serine esterase 1; Triacylglycerol hydrolase; TGH; Precursor;)
genome : 55,844,483 - 55,853,492 (9,010)
query : 1 - 499 (499/499)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.1
,
EC 3.1.1.56
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.1667, cyto 13.5, cyto_plas 8.83333,
nucl 7.5, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013044)
HIX0013044
HIT000676176 (
ENST00000563005
)
(Putative inactive carboxylesterase 4; Inactive carboxylesterase 1 pseudogene 1; Placental carboxylesterase 3; PCE-3; Precursor;)
genome : 55,853,916 - 55,867,008 (13,093)
query : 1 - 1,002 (1,002/1,002)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11.5, nucl 9.5, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013044)
HIX0013044
HIT000683286 (
ENST00000570390
)
(Putative inactive carboxylesterase 4; Inactive carboxylesterase 1 pseudogene 1; Placental carboxylesterase 3; PCE-3; Precursor;)
genome : 55,853,916 - 55,867,008 (13,093)
query : 1 - 1,002 (1,002/1,002)
5 exons
identity = 0.991
3'(1.000;1.000;1.000;1.000;0.903)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11.5, nucl 9.5, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013044)
HIX0013044
HIT000678485 (
ENST00000565403
)
(Carboxylesterase 1E; EC=3.1.1.1; Carboxyesterase ES-3; ES-HTEL; Egasyn; Liver carboxylesterase 3; pI 5.5 esterase; Precursor;)
genome : 55,854,241 - 55,867,016 (12,776)
query : 1 - 540 (540/540)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.1
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 12.5, mito 7, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013044)
HIX0013044
HIT000679590 (
ENST00000566555
)
(Liver carboxylesterase 1; Acyl-coenzyme A:cholesterol acyltransferase; ACAT; Brain carboxylesterase hBr1; Carboxylesterase 1; CE-1; hCE-1; EC=3.1.1.1; Cocaine carboxylesterase; Egasyn; HMSE; Methylumbelliferyl-acetate deacetylase 1; EC=3.1.1.56; Monocyte/macrophage serine esterase; Retinyl ester hydrolase; REH; Serine esterase 1; Triacylglycerol hydrolase; TGH; Precursor;)
genome : 55,855,341 - 55,862,087 (6,747)
query : 1 - 659 (659/659)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.1
,
EC 3.1.1.56
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 11.5, extr 9, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013044)
HIX0013044
HIT000688281 (
ENST00000576192
)
(Liver carboxylesterase 1; Acyl-coenzyme A:cholesterol acyltransferase; ACAT; Brain carboxylesterase hBr1; Carboxylesterase 1; CE-1; hCE-1; EC=3.1.1.1; Cocaine carboxylesterase; Egasyn; HMSE; Methylumbelliferyl-acetate deacetylase 1; EC=3.1.1.56; Monocyte/macrophage serine esterase; Retinyl ester hydrolase; REH; Serine esterase 1; Triacylglycerol hydrolase; TGH; Precursor;)
genome : 55,855,341 - 55,862,087 (6,747)
query : 1 - 659 (659/659)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.1
,
EC 3.1.1.56
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 12, extr 6, mito 6, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013044)
HIX0013045
HIT000095493
(
BC039073
)
(Carboxylesterase 5A isoform 1 precursor.)
genome : 55,880,066 - 55,959,338 (79,273)
query : 1 - 2,187 (2,187/2,298)
13 exons
identity = 0.997
3'(0.992;1.000;0.993;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.993;1.000;0.990)5'
coverage = 1.000
EC number :
EC 3.1.1.1
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
InterPro :
IPR002018 : Carboxylesterase, type B
IPR019826 : Carboxylesterase type B, active site
IPR029058 : Alpha/Beta hydrolase fold
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 9.5, nucl 5.5, pero 4.5, plas 4,
mito_pero 3.33333, extr 2, cysk_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013045)
HIX0013045
HIT000213040 (
NM_145024
)
(Carboxylesterase 5A isoform 2 precursor.)
genome : 55,880,066 - 55,909,282 (29,217)
query : 1 - 2,024 (2,024/2,135)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.1
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 19, E.R. 7, E.R._mito 6.5, extr 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013045)
HIX0013045
HIT000560808 (
NM_001143685
)
(Carboxylesterase 5A isoform 1 precursor.)
genome : 55,880,066 - 55,909,282 (29,217)
query : 1 - 2,174 (2,174/2,285)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.1
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 17, E.R. 7, E.R._mito 6.5, extr 3, pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013045)
HIX0013045
HIT000488958
(
AK294334
)
Representative transcript
(Carboxylesterase 5A isoform 3 precursor.)
genome : 55,880,066 - 55,989,943 (109,878)
query : 1 - 2,258 (2,258/2,258)
14 exons
identity = 0.999
3'(1.000;1.000;0.993;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.993;1.000;1.000;0.995)5'
coverage = 1.000
EC number :
EC 3.1.1.1
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
InterPro :
IPR002018 : Carboxylesterase, type B
IPR019819 : Carboxylesterase type B, conserved site
IPR019826 : Carboxylesterase type B, active site
IPR029058 : Alpha/Beta hydrolase fold
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 21, pero 5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013045)
Ortholog candidate ( ->
Evola
)
Canis
sp. (Dog) : AB186392
Bos
sp. (Cow) : BC102781
Danio
sp. (Zebrafish) : BC124754
Danio
sp. (Zebrafish) : BC155642
Gallus
sp. (Chicken) : CR353208
Tetraodon
sp. (Tetraodon) : CR637401
Mus
sp. (Mouse) : ENSMUST00000077816
Oryzias
sp. (Medaka) : ENSORLT00000017489
Pongo
sp. (Orangutan) : ENSPPYT00000008656
Rattus
sp. (Rat) : ENSRNOT00000046950
Monodelphis
sp. (Opossum) : EU019537
Takifugu
sp. (Fugu) : SINFRUT00000153010
Takifugu
sp. (Fugu) : SINFRUT00000167468
Takifugu
sp. (Fugu) : SINFRUT00000172258
Takifugu
sp. (Fugu) : SINFRUT00000181545
Equus
sp. (Horse) : XM_001493427
Macaca
sp. (Macaque) : XR_010824
Pan
sp. (Chimpanzee) : XR_022661
HIX0013045
HIT000621300 (
ENST00000521992
)
(Carboxylesterase 5A isoform 3 precursor.)
genome : 55,880,066 - 55,989,943 (109,878)
query : 1 - 2,258 (2,258/2,258)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.1
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 21, pero 5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013045)
HIX0013045
HIT000655587 (
NM_001190158
)
(Carboxylesterase 5A isoform 3 precursor.)
genome : 55,880,066 - 55,989,943 (109,878)
query : 1 - 2,258 (2,258/2,258)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.1
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 21, pero 5, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013045)
HIX0013045
HIT000685686 (
ENST00000573178
)
(Carboxylesterase 5A isoform 3 precursor.)
genome : 55,880,066 - 55,989,943 (109,878)
query : 1 - 2,258 (2,258/2,258)
14 exons
identity = 0.998
3'(0.994;1.000;0.993;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.993;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.1
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 21, pero 5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013045)
HIX0013045
HIT000683565 (
ENST00000570713
)
(Carboxylesterase 5A isoform 1 precursor.)
genome : 55,880,066 - 55,959,338 (79,273)
query : 1 - 2,188 (2,188/2,188)
13 exons
identity = 0.998
3'(0.994;1.000;0.993;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.993;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.1
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 9.5, nucl 5.5, pero 4.5, plas 4,
mito_pero 3.33333, extr 2, cysk_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013045)
HIX0013045
HIT000620545 (
ENST00000521228
)
(Carboxylesterase 5A isoform 1 precursor.)
genome : 55,880,066 - 55,907,950 (27,885)
query : 104 - 2,188 (2,085/2,188)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.953
EC number :
EC 3.1.1.1
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 9.5, nucl 5.5, pero 4.5, plas 4,
mito_pero 3.33333, extr 2, cysk_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013045)
HIX0013045
HIT000015864
(
AK090997
)
(Carboxylesterase 5A; EC=3.1.1.1; Carboxylesterase-like urinary excreted protein homolog; Cauxin; Fragment;)
genome : 55,880,074 - 55,959,372 (79,299)
query : 1 - 2,092 (2,092/2,092)
13 exons
identity = 0.997
3'(0.992;1.000;0.993;1.000;1.000;0.993;1.000;
1.000;1.000;1.000;0.993;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.1
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
InterPro :
IPR002018 : Carboxylesterase, type B
IPR019819 : Carboxylesterase type B, conserved site
IPR019826 : Carboxylesterase type B, active site
IPR029058 : Alpha/Beta hydrolase fold
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013045)
HIX0013045
HIT000685318 (
ENST00000572754
)
(Carboxylesterase 5A; EC=3.1.1.1; Carboxylesterase-like urinary excreted protein homolog; Cauxin; Fragment;)
genome : 55,880,074 - 55,959,372 (79,299)
query : 1 - 2,092 (2,092/2,092)
13 exons
identity = 0.998
3'(0.994;1.000;0.993;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.993;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.1
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013045)
HIX0013045
HIT000121951 (
ENST00000319165
)
(Carboxylesterase 5A isoform 2 precursor.)
genome : 55,880,074 - 55,909,282 (29,209)
query : 1 - 2,016 (2,016/2,016)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.1
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 19, E.R. 7, E.R._mito 6.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013045)
HIX0013045
HIT000688704 (
ENST00000576682
)
(Carboxylesterase 5A isoform 2 precursor.)
genome : 55,880,074 - 55,909,282 (29,209)
query : 1 - 2,016 (2,016/2,016)
12 exons
identity = 0.998
3'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.993;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.1
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 19, E.R. 7, E.R._mito 6.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013045)
HIX0013045
HIT000617392 (
ENST00000518005
)
(Carboxylesterase 5A; EC=3.1.1.1; Carboxylesterase-like urinary excreted protein homolog; Cauxin; Fragment;)
genome : 55,880,074 - 55,907,950 (27,877)
query : 138 - 2,092 (1,955/2,092)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.935
EC number :
EC 3.1.1.1
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013045)
HIX0013045
HIT000386207
(
AY907669
)
(Carboxylesterase 5A isoform 1 precursor.)
genome : 55,880,129 - 55,909,209 (29,081)
query : 1 - 2,038 (2,038/2,056)
13 exons
identity = 0.999
3'(1.000;1.000;0.993;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.993;1.000;0.993)5'
coverage = 1.000
EC number :
EC 3.1.1.1
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
InterPro :
IPR002018 : Carboxylesterase, type B
IPR019819 : Carboxylesterase type B, conserved site
IPR019826 : Carboxylesterase type B, active site
IPR029058 : Alpha/Beta hydrolase fold
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 17, E.R. 7, E.R._mito 6.5, extr 3, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013045)
HIX0013045
HIT000012723
(
AK056109
)
(Carboxylesterase 5A isoform 2 precursor.)
genome : 55,880,128 - 55,909,282 (29,155)
query : 1 - 1,962 (1,962/1,962)
12 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.993;1.000;1.000;
1.000;1.000;0.993;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.1
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
InterPro :
IPR002018 : Carboxylesterase, type B
IPR019819 : Carboxylesterase type B, conserved site
IPR019826 : Carboxylesterase type B, active site
IPR029058 : Alpha/Beta hydrolase fold
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 19, E.R. 7, E.R._mito 6.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013045)
HIX0013045
HIT000113307 (
ENST00000290567
)
(Carboxylesterase 5A isoform 1 precursor.)
genome : 55,880,129 - 55,909,255 (29,127)
query : 1 - 2,084 (2,084/2,084)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.1
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 17, E.R. 7, E.R._mito 6.5, extr 3, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013045)
HIX0013045
HIT000688306 (
ENST00000576219
)
(Carboxylesterase 5A isoform 1 precursor.)
genome : 55,880,129 - 55,909,255 (29,127)
query : 1 - 2,084 (2,084/2,084)
13 exons
identity = 0.998
3'(0.994;1.000;0.993;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.993;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.1
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 17, E.R. 7, E.R._mito 6.5, extr 3, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013045)
HIX0013045
HIT000640625 (
ENST00000541580
)
(Carboxylesterase 5A isoform 1 precursor.)
genome : 55,880,131 - 55,978,376 (98,246)
query : 1 - 1,669 (1,669/1,669)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.1
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
SOSUI :
SOLUBLE PROTEIN
PSORT :
pero 7, mito_pero 5.83333, plas 5, extr 5, cyto 5,
extr_plas 5, cyto_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013045)
HIX0013045
HIT000688397 (
ENST00000576322
)
(Carboxylesterase 5A isoform 1 precursor.)
genome : 55,880,131 - 55,978,376 (98,246)
query : 1 - 1,669 (1,669/1,669)
9 exons
identity = 0.998
3'(0.994;1.000;0.993;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.1
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
SOSUI :
SOLUBLE PROTEIN
PSORT :
pero 7, mito_pero 5.83333, plas 5, extr 5, cyto 5,
extr_plas 5, cyto_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013045)
HIX0013045
HIT000619774 (
ENST00000520435
)
(Carboxylesterase 5A isoform 1 precursor.)
genome : 55,880,131 - 55,909,211 (29,081)
query : 1 - 1,948 (1,948/1,948)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.1
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 17, E.R. 7, E.R._mito 6.5, extr 3, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013045)
HIX0013045
HIT000685986 (
ENST00000573522
)
(Carboxylesterase 5A isoform 1 precursor.)
genome : 55,880,131 - 55,909,211 (29,081)
query : 1 - 1,948 (1,948/1,948)
13 exons
identity = 0.997
3'(0.994;1.000;0.993;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.980;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.1
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 17, E.R. 7, E.R._mito 6.5, extr 3, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013045)
HIX0013045
HIT000263652
(
BC069501
)
(Carboxylesterase 5A isoform 1 precursor.)
genome : 55,880,164 - 55,909,253 (29,090)
query : 1 - 2,047 (2,047/2,047)
13 exons
identity = 0.999
3'(1.000;1.000;0.993;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.993;1.000;0.995)5'
coverage = 1.000
EC number :
EC 3.1.1.1
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
InterPro :
IPR002018 : Carboxylesterase, type B
IPR019819 : Carboxylesterase type B, conserved site
IPR019826 : Carboxylesterase type B, active site
IPR029058 : Alpha/Beta hydrolase fold
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 17, E.R. 7, E.R._mito 6.5, extr 3, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013045)
HIX0013045
HIT000263699
(
BC069548
)
(Carboxylesterase 5A isoform 2 precursor.)
genome : 55,880,164 - 55,909,252 (29,089)
query : 1 - 1,896 (1,896/1,896)
12 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.990;
1.000;1.000;0.993;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.1
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
InterPro :
IPR002018 : Carboxylesterase, type B
IPR019819 : Carboxylesterase type B, conserved site
IPR019826 : Carboxylesterase type B, active site
IPR029058 : Alpha/Beta hydrolase fold
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 19, E.R. 7, E.R._mito 6.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013045)
HIX0013045
HIT000643524 (
ENST00000544479
)
(Fatty acyl-CoA hydrolase precursor, medium chain; EC=3.1.2.-; Thioesterase B; Precursor;)
genome : 55,880,306 - 55,903,666 (23,361)
query : 18 - 1,067 (1,050/1,067)
7 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.986)5'
coverage = 0.984
EC number :
EC 3.1.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, pero 9, mito_pero 7.16667, extr 4, nucl 4,
E.R._mito 3.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013045)
HIX0013045
HIT000688838 (
ENST00000576831
)
(Fatty acyl-CoA hydrolase precursor, medium chain; EC=3.1.2.-; Thioesterase B; Precursor;)
genome : 55,880,306 - 55,903,666 (23,361)
query : 18 - 1,067 (1,050/1,067)
7 exons
identity = 0.994
3'(0.990;1.000;0.993;1.000;1.000;1.000;0.986)5'
coverage = 0.984
EC number :
EC 3.1.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, pero 9, mito_pero 7.16667, extr 4, nucl 4,
E.R._mito 3.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013045)
HIX0013045
HIT000387416
(
BC117126
)
(Carboxylesterase 5A isoform 1 precursor.)
genome : 55,880,322 - 55,909,255 (28,934)
query : 1 - 1,891 (1,891/1,891)
13 exons
identity = 0.998
3'(1.000;1.000;0.993;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.993;1.000;0.995)5'
coverage = 1.000
EC number :
EC 3.1.1.1
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
InterPro :
IPR002018 : Carboxylesterase, type B
IPR019819 : Carboxylesterase type B, conserved site
IPR019826 : Carboxylesterase type B, active site
IPR029058 : Alpha/Beta hydrolase fold
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 17, E.R. 7, E.R._mito 6.5, extr 3, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013045)
HIX0013045
HIT000502136
(
BC143692
)
(Carboxylesterase 5A isoform 1 precursor.)
genome : 55,880,322 - 55,909,255 (28,934)
query : 1 - 1,891 (1,891/1,891)
13 exons
identity = 0.998
3'(1.000;1.000;0.993;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.993;1.000;0.995)5'
coverage = 1.000
EC number :
EC 3.1.1.1
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
InterPro :
IPR002018 : Carboxylesterase, type B
IPR019819 : Carboxylesterase type B, conserved site
IPR019826 : Carboxylesterase type B, active site
IPR029058 : Alpha/Beta hydrolase fold
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 17, E.R. 7, E.R._mito 6.5, extr 3, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013045)
HIX0013045
HIT000635070 (
ENST00000536025
)
(Carboxylesterase 5A isoform 2 precursor.)
genome : 55,903,531 - 55,959,338 (55,808)
query : 1 - 574 (574/574)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.1
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 28, cyto_nucl 15.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013045)
HIX0013045
HIT000686794 (
ENST00000574456
)
(Carboxylesterase 5A isoform 2 precursor.)
genome : 55,903,531 - 55,959,338 (55,808)
query : 1 - 574 (574/574)
4 exons
identity = 0.998
3'(1.000;0.993;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.1.1
KEGG pathway :
00983 : Drug metabolism - other enzymes (20)
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 28, cyto_nucl 15.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013045)
HIX0212122
HIT000454447_08
(
DQ587916
)
Representative transcript
(Non-protein coding transcript.)
genome : 56,023,765 - 56,023,794 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212122)
HIX0038817
HIT000093700
(
BC035113
)
Representative transcript
(Putative uncharacterized protein encoded by LINC00575;)
genome : 56,126,899 - 56,225,006 (98,108)
query : 1 - 2,678 (2,678/2,695)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;0.999)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038817)
HIX0038817
HIT000563240 (
NR_027078
)
(Conserved hypothetical protein.)
genome : 56,126,899 - 56,225,006 (98,108)
query : 1 - 2,678 (2,678/2,678)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, extr 9, nucl 7, cyto_mito 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038817)
HIX0038817
HIT000602461 (
ENST00000501259
)
(Putative uncharacterized protein encoded by LINC00575;)
genome : 56,126,899 - 56,225,006 (98,108)
query : 1 - 2,678 (2,678/2,678)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038817)
HIX0038815
HIT000093272
(
BC033938
)
Representative transcript
(Hypothetical short protein.)
genome : 56,142,892 - 56,143,871 (980)
query : 6 - 985 (980/1,002)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 0.993
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, mito 5, cyto_mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038815)
HIX0038815
HIT000675999 (
ENST00000562822
)
(Hypothetical short protein.)
genome : 56,143,449 - 56,170,655 (27,207)
query : 1 - 459 (459/459)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, cyto_mito 4.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038815)
HIX0038815
HIT000677235 (
ENST00000564102
)
(Hypothetical short protein.)
genome : 56,155,827 - 56,170,912 (15,086)
query : 1 - 535 (535/535)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 3.5, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038815)
HIX0038817
HIT000678245 (
ENST00000565155
)
(Conserved hypothetical protein.)
genome : 56,177,611 - 56,223,480 (45,870)
query : 1 - 559 (559/559)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038817)
HIX0038817
HIT000681977 (
ENST00000569025
)
(Conserved hypothetical protein.)
genome : 56,203,591 - 56,223,919 (20,329)
query : 1 - 888 (888/888)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038817)
HIX0038813
HIT000092861
(
BC032905
)
Representative transcript
(Hypothetical short protein.)
genome : 56,217,641 - 56,220,218 (2,578)
query : 1 - 792 (792/806)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 16, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038813)
HIX0038813
HIT000678520 (
ENST00000565441
)
(Hypothetical short protein.)
genome : 56,217,638 - 56,220,218 (2,581)
query : 1 - 795 (795/795)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 16, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038813)
HIX0038817
HIT000680922 (
ENST00000567929
)
(Conserved hypothetical protein.)
genome : 56,220,986 - 56,221,990 (1,005)
query : 1 - 665 (665/665)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038817)
HIX0013047
HIT000087807
(
BC012202
)
(Non-protein coding transcript.)
genome : 56,225,379 - 56,309,883 (84,505)
query : 1 - 971 (971/1,001)
3 exons
identity = 0.995
3'(0.994;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013047)
HIX0223254
HIT000683144 (
ENST00000570235
)
(Conserved hypothetical protein.)
genome : 56,225,887 - 56,226,606 (720)
query : 1 - 500 (500/500)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 5.5, cyto_nucl 3.5, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223254)
HIX0223254
HIT000682239 (
ENST00000569295
)
(Conserved hypothetical protein.)
genome : 56,225,926 - 56,247,319 (21,394)
query : 1 - 519 (519/519)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, cyto 6.5, extr 6, cyto_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223254)
HIX0013047
HIT000024742
(
AL117580
)
(Hypothetical protein.)
genome : 56,226,525 - 56,227,805 (1,281)
query : 1 - 1,282 (1,282/1,321)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013047)
HIX0013047
HIT000044002
(
AK124129
)
Representative transcript
(Hypothetical protein.)
genome : 56,226,526 - 56,228,430 (1,905)
query : 5 - 1,909 (1,905/1,910)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013047)
HIX0013047
HIT000680393 (
ENST00000567381
)
(Hypothetical protein.)
genome : 56,226,526 - 56,228,430 (1,905)
query : 1 - 1,905 (1,905/1,905)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013047)
HIX0013047
HIT000563068 (
NR_026889
)
(Hypothetical protein.)
genome : 56,226,529 - 56,228,437 (1,909)
query : 1 - 1,909 (1,909/1,909)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013047)
HIX0223033
HIT000676598 (
ENST00000563440
)
(Guanine nucleotide binding protein (G-protein), alpha subunit family protein.)
genome : 56,260,291 - 56,368,687 (108,397)
query : 1 - 543 (543/543)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, nucl 10.5, extr 10, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223033)
HIX0212270
HIT000659858 (
NR_037499
)
(Non-protein coding transcript.)
genome : 56,279,432 - 56,279,535 (104)
query : 1 - 104 (104/104)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212270)
HIX0212270
HIT000695353 (
ENST00000583472
)
(Non-protein coding transcript.)
genome : 56,279,432 - 56,279,535 (104)
query : 1 - 104 (104/104)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212270)
HIX0096579
HIT000390030
(
BC129982
)
Representative transcript
(Conserved hypothetical protein.)
genome : 56,285,560 - 56,287,234 (1,675)
query : 4 - 1,679 (1,676/1,683)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0096579)
HIX0223033
HIT000194679
(
M19182
)
Representative transcript
(Guanine nucleotide binding protein (G-protein), alpha subunit family protein.)
genome : 56,309,843 - 56,388,980 (79,138)
query : 2 - 920 (919/920)
6 exons
identity = 0.996
5'(1.000;1.000;0.984;0.992;1.000;0.995)3'
coverage = 0.999
InterPro :
IPR001019 : Guanine nucleotide binding protein (G-protein), alpha subunit
IPR001408 : G-protein alpha subunit, group I
IPR011025 : G protein alpha subunit, helical insertion
GO :
0003924 : Molecular Function : GTPase activity
0004871 : Molecular Function : signal transducer activity
0005525 : Molecular Function : GTP binding
0006184 : Biological Process : GTP catabolic process
0007165 : Biological Process : signal transduction
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007188 : Biological Process : adenylate cyclase-modulating G-protein coupled receptor signaling pathway
0019001 : Molecular Function : guanyl nucleotide binding
0031683 : Molecular Function : G-protein beta/gamma-subunit complex binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 10.5, cysk 7, extr 5, nucl 3.5,
cysk_plas 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223033)
HIX0027012
HIT000045280
(
AK125407
)
Representative transcript
(Activating molecule in BECN1-regulated autophagy protein 1 isoform 1.)
genome : 56,325,816 - 56,328,253 (2,438)
query : 1 - 2,438 (2,438/2,438)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 7, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0027012)
HIX0013048
HIT000017972
(
AK093105
)
Representative transcript
(Conserved hypothetical protein.)
genome : 56,334,528 - 56,336,816 (2,289)
query : 1 - 1,777 (1,777/1,777)
2 exons
identity = 0.999
5'(0.998;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 6.5, nucl 5.5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013048)
HIX0013048
HIT000677209 (
ENST00000564074
)
(Hypothetical short protein.)
genome : 56,334,528 - 56,336,816 (2,289)
query : 1 - 1,777 (1,777/1,777)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 6.5, nucl 5.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013048)
HIX0134432
HIT000430005
(
AK311139
)
Representative transcript
(Hypothetical protein.)
genome : 56,340,757 - 56,342,247 (1,491)
query : 1 - 1,491 (1,491/1,491)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0134432)
HIX0223033
HIT000681356 (
ENST00000568375
)
(G-protein alpha subunit, group I family protein.)
genome : 56,370,658 - 56,389,033 (18,376)
query : 1 - 371 (371/371)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223033)
HIX0222967
HIT000055861
(
BX647214
)
Representative transcript
(Guanine nucleotide binding protein (G-protein), alpha subunit family protein.)
genome : 56,374,208 - 56,382,041 (7,834)
query : 1 - 5,057 (5,057/5,076)
2 exons
identity = 0.997
5'(0.997;0.997)3'
coverage = 1.000
InterPro :
IPR001019 : Guanine nucleotide binding protein (G-protein), alpha subunit
IPR001408 : G-protein alpha subunit, group I
GO :
0003924 : Molecular Function : GTPase activity
0004871 : Molecular Function : signal transducer activity
0005525 : Molecular Function : GTP binding
0006184 : Biological Process : GTP catabolic process
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007188 : Biological Process : adenylate cyclase-modulating G-protein coupled receptor signaling pathway
0019001 : Molecular Function : guanyl nucleotide binding
0031683 : Molecular Function : G-protein beta/gamma-subunit complex binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 12.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222967)
HIX0222967
HIT000677903 (
ENST00000564798
)
(Guanine nucleotide binding protein (G-protein), alpha subunit family protein.)
genome : 56,374,208 - 56,382,047 (7,840)
query : 1 - 5,065 (5,065/5,065)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 12.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222967)
HIX0222967
HIT000326074
(
Y18213
)
(Guanine nucleotide binding protein (G-protein), alpha subunit family protein.)
genome : 56,374,757 - 56,377,888 (3,132)
query : 1 - 357 (357/357)
2 exons
identity = 0.997
5'(1.000;0.995)3'
coverage = 1.000
InterPro :
IPR001019 : Guanine nucleotide binding protein (G-protein), alpha subunit
IPR001408 : G-protein alpha subunit, group I
GO :
0003924 : Molecular Function : GTPase activity
0004871 : Molecular Function : signal transducer activity
0005525 : Molecular Function : GTP binding
0006184 : Biological Process : GTP catabolic process
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0007188 : Biological Process : adenylate cyclase-modulating G-protein coupled receptor signaling pathway
0019001 : Molecular Function : guanyl nucleotide binding
0031683 : Molecular Function : G-protein beta/gamma-subunit complex binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, extr 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222967)
HIX0222967
HIT000490304
(
AK295680
)
(Conserved hypothetical protein.)
genome : 56,377,946 - 56,379,140 (1,195)
query : 1 - 1,195 (1,195/1,195)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, nucl 7.5, cyto_nucl 7.16667, cyto 3.5,
cyto_pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222967)
HIX0222967
HIT000026461
(
AL512686
)
(Conserved hypothetical protein.)
genome : 56,378,192 - 56,382,111 (3,920)
query : 1 - 3,920 (3,920/3,938)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto_nucl 6.66667, nucl 6.5, cyto 3.5,
cyto_pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222967)
HIX0194697
pHIT000027165 ( pHIT000027165 )
Representative transcript
(Hypothetical protein.)
genome : 56,378,675 - 56,380,694 (2,020)
query : 1 - 303 (303/303)
2 exons
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0194697)
CAGE tag :
H08BA21C1709
HIX0223033
HIT000677835 (
ENST00000564727
)
(Guanine nucleotide binding protein (G-protein), alpha subunit family protein.)
genome : 56,385,353 - 56,389,120 (3,768)
query : 1 - 440 (440/440)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 12, cyto_nucl 11.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223033)
HIX0202361
HIT000390645
(
BC131743
)
Representative transcript
(Hypothetical protein.)
genome : 56,385,798 - 56,387,436 (1,639)
query : 10 - 1,646 (1,637/1,656)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 0.989
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, nucl 2, mito 2, mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202361)
HIX0013050
HIT000259189
(
BC051032
)
(E3 ubiquitin-protein ligase AMFR; EC=6.3.2.-; Autocrine motility factor receptor; AMF receptor; RING finger protein 45; gp78;)
genome : 56,395,364 - 56,401,457 (6,094)
query : 7 - 1,891 (1,885/1,926)
3 exons
identity = 0.989
3'(0.991;1.000;0.951)5'
coverage = 0.997
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, extr 5, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013050)
HIX0013050
HIT000198145 (
NM_001144
)
(Ubiquitin system component Cue domain containing protein.)
genome : 56,395,364 - 56,459,450 (64,087)
query : 1 - 3,600 (3,600/3,631)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.19
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013050)
HIX0013050
HIT000113318 (
ENST00000290649
)
(Ubiquitin system component Cue domain containing protein.)
genome : 56,395,364 - 56,459,450 (64,087)
query : 1 - 3,600 (3,600/3,600)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013050)
HIX0013050
HIT000196063
(
M63175
)
(Conserved hypothetical protein.)
genome : 56,395,393 - 56,401,401 (6,009)
query : 4 - 1,803 (1,800/1,810)
3 exons
identity = 0.989
3'(0.989;0.995;0.978)5'
coverage = 0.994
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 11, plas 7.5, nucl 6, cyto_mito 6, pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013050)
HIX0013050
HIT000007148
(
AK023874
)
(Ubiquitin system component Cue domain containing protein.)
genome : 56,395,472 - 56,437,029 (41,558)
query : 1 - 2,239 (2,239/2,239)
7 exons
identity = 0.993
3'(0.990;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003892 : Ubiquitin system component Cue
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 17, cyto 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013050)
HIX0013050
HIT000596294 (
ENST00000492830
)
(Ubiquitin system component Cue domain containing protein.)
genome : 56,395,472 - 56,437,029 (41,558)
query : 1 - 2,249 (2,249/2,249)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 17, cyto 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013050)
HIX0013050
HIT000259594
(
BC056869
)
(Ubiquitin system component Cue domain containing protein.)
genome : 56,395,882 - 56,419,887 (24,006)
query : 1 - 1,548 (1,548/1,569)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003892 : Ubiquitin system component Cue
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 14.5, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013050)
HIX0013050
HIT000263357
(
BC069197
)
Representative transcript
(E3 ubiquitin-protein ligase AMFR; EC=6.3.2.-; Autocrine motility factor receptor; AMF receptor; RING finger protein 45; gp78;)
genome : 56,395,892 - 56,459,450 (63,559)
query : 1 - 3,072 (3,072/3,091)
14 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
InterPro :
IPR003892 : Ubiquitin system component Cue
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013050)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB169185
Mus
sp. (Mouse) : AF124144
Rattus
sp. (Rat) : BC098748
Bos
sp. (Cow) : BC112457
Danio
sp. (Zebrafish) : ENSDART00000012944
Equus
sp. (Horse) : ENSECAT00000017000
Oryzias
sp. (Medaka) : ENSORLT00000014928
Pongo
sp. (Orangutan) : ENSPPYT00000008658
Tetraodon
sp. (Tetraodon) : GSTENT00021431001
Takifugu
sp. (Fugu) : SINFRUT00000159671
Pan
sp. (Chimpanzee) : XM_001135064
Monodelphis
sp. (Opossum) : XM_001364653
Gallus
sp. (Chicken) : XM_414064
Canis
sp. (Dog) : XM_544395
HIX0013050
HIT000089169
(
BC017043
)
(Ubiquitin system component Cue domain containing protein.)
genome : 56,395,892 - 56,435,677 (39,786)
query : 1 - 1,809 (1,809/1,826)
7 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR003892 : Ubiquitin system component Cue
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, nucl 12, cyto_nucl 10.1667, cyto 4,
cyto_pero 3.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013050)
HIX0222989
HIT000043835
(
AK123962
)
Representative transcript
(Conserved hypothetical protein.)
genome : 56,395,914 - 56,397,757 (1,844)
query : 1 - 1,844 (1,844/1,844)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto 10, cyto_nucl 10, cyto_mito 7.66667,
cyto_pero 6.83333, nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222989)
HIX0222989
HIT000679786 (
ENST00000566757
)
(Conserved hypothetical protein.)
genome : 56,395,914 - 56,397,757 (1,844)
query : 1 - 1,844 (1,844/1,844)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto 10, cyto_nucl 10, cyto_mito 7.66667,
cyto_pero 6.83333, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222989)
HIX0013050
HIT000070409
(
AF124145
)
(E3 ubiquitin-protein ligase AMFR; EC=6.3.2.-; Autocrine motility factor receptor; AMF receptor; RING finger protein 45; gp78;)
genome : 56,395,922 - 56,459,303 (63,382)
query : 2 - 2,898 (2,897/2,898)
14 exons
identity = 0.998
3'(0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 6.3.2.-
InterPro :
IPR003892 : Ubiquitin system component Cue
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013050)
HIX0013050
HIT000193219
(
L35233
)
(Ubiquitin system component Cue domain containing protein.)
genome : 56,395,931 - 56,435,674 (39,744)
query : 1 - 1,765 (1,765/1,765)
7 exons
identity = 0.987
3'(0.988;0.989;1.000;0.978;1.000;0.979;0.933)5'
coverage = 1.000
InterPro :
IPR003892 : Ubiquitin system component Cue
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 13, plas 7.5, nucl 6, extr_plas 4.5, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013050)
HIX0013050
HIT000681309 (
ENST00000568325
)
(Conserved hypothetical protein.)
genome : 56,395,935 - 56,398,028 (2,094)
query : 1 - 1,230 (1,230/1,230)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 14, cyto 4.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013050)
HIX0013050
HIT000436090
(
BC153819
)
(Ubiquitin system component Cue domain containing protein.)
genome : 56,396,800 - 56,438,911 (42,112)
query : 7 - 1,210 (1,204/1,211)
9 exons
identity = 0.998
3'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.989)5'
coverage = 0.994
InterPro :
IPR003892 : Ubiquitin system component Cue
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 7, E.R. 6, pero 5.5, mito_pero 5.5, extr 4.5,
extr_plas 4.5, plas 3.5, cyto_golg 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013050)
HIX0013050
HIT000676446 (
ENST00000563285
)
(Conserved hypothetical protein.)
genome : 56,396,828 - 56,401,515 (4,688)
query : 1 - 486 (486/486)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013050)
HIX0013050
HIT000680740 (
ENST00000567738
)
(Ubiquitin system component Cue domain containing protein.)
genome : 56,397,992 - 56,437,015 (39,024)
query : 1 - 866 (866/866)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.3333, cyto 12, mito 9, cyto_pero 8.16667,
nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013050)
HIX0013050
HIT000679372 (
ENST00000566334
)
(Ubiquitin system component Cue domain containing protein.)
genome : 56,401,203 - 56,419,884 (18,682)
query : 1 - 426 (426/426)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 19, cyto 14.5, nucl 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013050)
HIX0013050
HIT000681727 (
ENST00000568762
)
(Conserved hypothetical protein.)
genome : 56,419,554 - 56,435,687 (16,134)
query : 1 - 424 (424/424)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 8, nucl 6.5, extr_plas 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013050)
HIX0013050
HIT000678524 (
ENST00000565445
)
(Conserved hypothetical protein.)
genome : 56,436,898 - 56,458,907 (22,010)
query : 1 - 803 (803/803)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013050)
HIX0013050
HIT000676808 (
ENST00000563664
)
(Conserved hypothetical protein.)
genome : 56,438,880 - 56,458,783 (19,904)
query : 1 - 567 (567/567)
6 exons
identity = 0.993
3'(1.000;1.000;1.000;1.000;1.000;0.918)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013050)
HIX0013050
HIT000681630 (
ENST00000568657
)
(Conserved hypothetical protein.)
genome : 56,441,920 - 56,458,890 (16,971)
query : 1 - 539 (539/539)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 16, extr 15
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013050)
HIX0223476
HIT000676255 (
ENST00000563090
)
(Conserved hypothetical protein.)
genome : 56,443,232 - 56,445,595 (2,364)
query : 1 - 549 (549/549)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223476)
HIX0013050
HIT000677411 (
ENST00000564283
)
(Hypothetical short protein.)
genome : 56,448,233 - 56,458,107 (9,875)
query : 1 - 550 (550/550)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 3, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013050)
HIX0013050
HIT000449252
(
DQ582721
)
(Non-protein coding transcript.)
genome : 56,457,934 - 56,457,965 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013050)
HIX0013051
HIT000056312
(
BX647665
)
(Cleavage and polyadenylation specificity factor subunit 5; Cleavage and polyadenylation specificity factor 25 kDa subunit; CFIm25; CPSF 25 kDa subunit; Nucleoside diphosphate-linked moiety X motif 21; Nudix motif 21; Pre-mRNA cleavage factor Im 25 kDa subunit;)
genome : 56,463,048 - 56,485,246 (22,199)
query : 2 - 4,029 (4,028/4,058)
3 exons
identity = 0.998
3'(0.998;0.989;1.000)5'
coverage = 1.000
InterPro :
IPR016706 : Cleavage/polyadenylation specificity factor subunit 5
GO :
0003729 : Molecular Function : mRNA binding
0005849 : Cellular Component : mRNA cleavage factor complex
0006378 : Biological Process : mRNA polyadenylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, nucl 8.5, cyto_nucl 8.5, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013051)
HIX0013051
HIT000054177
(
BX537360
)
(Cleavage and polyadenylation specificity factor subunit 5; Cleavage and polyadenylation specificity factor 25 kDa subunit; CFIm25; CPSF 25 kDa subunit; Nucleoside diphosphate-linked moiety X motif 21; Nudix motif 21; Pre-mRNA cleavage factor Im 25 kDa subunit;)
genome : 56,463,046 - 56,485,265 (22,220)
query : 1 - 4,413 (4,413/4,429)
7 exons
identity = 0.999
3'(0.999;0.991;1.000;1.000;0.984;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000086 : NUDIX hydrolase domain
IPR015797 : NUDIX hydrolase domain-like
IPR016706 : Cleavage/polyadenylation specificity factor subunit 5
GO :
0003729 : Molecular Function : mRNA binding
0005849 : Cellular Component : mRNA cleavage factor complex
0006378 : Biological Process : mRNA polyadenylation
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, nucl 7, cyto 7, cyto_nucl 7, E.R._mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013051)
HIX0013051
HIT000115600 (
ENST00000300291
)
(Cleavage/polyadenylation specificity factor subunit 5 family protein.)
genome : 56,463,045 - 56,485,287 (22,243)
query : 1 - 4,436 (4,436/4,436)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, nucl 7, cyto 7, cyto_nucl 7, E.R._mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013051)
HIX0013051
HIT000203548 (
NM_007006
)
(Cleavage/polyadenylation specificity factor subunit 5 family protein.)
genome : 56,463,048 - 56,485,261 (22,214)
query : 1 - 4,407 (4,407/4,407)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, nucl 7, cyto 7, cyto_nucl 7, E.R._mito 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013051)
HIX0013051
HIT000030384
(
BC001403
)
Representative transcript
(Cleavage and polyadenylation specificity factor subunit 5; Cleavage and polyadenylation specificity factor 25 kDa subunit; CFIm25; CPSF 25 kDa subunit; Nucleoside diphosphate-linked moiety X motif 21; Nudix motif 21; Pre-mRNA cleavage factor Im 25 kDa subunit;)
genome : 56,466,543 - 56,485,222 (18,680)
query : 1 - 873 (873/893)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000086 : NUDIX hydrolase domain
IPR015797 : NUDIX hydrolase domain-like
IPR016706 : Cleavage/polyadenylation specificity factor subunit 5
GO :
0003729 : Molecular Function : mRNA binding
0005849 : Cellular Component : mRNA cleavage factor complex
0006378 : Biological Process : mRNA polyadenylation
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, nucl 7, cyto 7, cyto_nucl 7, E.R._mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013051)
HIX0013051
HIT000243895
(
AJ001810
)
(Cleavage and polyadenylation specificity factor subunit 5; Cleavage and polyadenylation specificity factor 25 kDa subunit; CFIm25; CPSF 25 kDa subunit; Nucleoside diphosphate-linked moiety X motif 21; Nudix motif 21; Pre-mRNA cleavage factor Im 25 kDa subunit;)
genome : 56,466,544 - 56,485,114 (18,571)
query : 1 - 764 (764/764)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000086 : NUDIX hydrolase domain
IPR015797 : NUDIX hydrolase domain-like
IPR016706 : Cleavage/polyadenylation specificity factor subunit 5
GO :
0003729 : Molecular Function : mRNA binding
0005849 : Cellular Component : mRNA cleavage factor complex
0006378 : Biological Process : mRNA polyadenylation
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, nucl 7, cyto 7, cyto_nucl 7, E.R._mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013051)
HIX0013051
HIT000431587
(
AK312721
)
(Cleavage and polyadenylation specificity factor subunit 5; Cleavage and polyadenylation specificity factor 25 kDa subunit; CFIm25; CPSF 25 kDa subunit; Nucleoside diphosphate-linked moiety X motif 21; Nudix motif 21; Pre-mRNA cleavage factor Im 25 kDa subunit;)
genome : 56,468,238 - 56,485,263 (17,026)
query : 1 - 817 (817/834)
6 exons
identity = 0.996
3'(0.992;1.000;0.989;1.000;1.000;0.996)5'
coverage = 0.980
InterPro :
IPR000086 : NUDIX hydrolase domain
IPR015797 : NUDIX hydrolase domain-like
IPR016706 : Cleavage/polyadenylation specificity factor subunit 5
GO :
0003729 : Molecular Function : mRNA binding
0005849 : Cellular Component : mRNA cleavage factor complex
0006378 : Biological Process : mRNA polyadenylation
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, nucl 7, cyto 7, cyto_nucl 7, E.R._mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013051)
HIX0013051
HIT000267769
(
CR456919
)
(Cleavage and polyadenylation specificity factor subunit 5; Cleavage and polyadenylation specificity factor 25 kDa subunit; CFIm25; CPSF 25 kDa subunit; Nucleoside diphosphate-linked moiety X motif 21; Nudix motif 21; Pre-mRNA cleavage factor Im 25 kDa subunit;)
genome : 56,468,238 - 56,485,114 (16,877)
query : 1 - 667 (667/684)
6 exons
identity = 0.997
3'(0.992;1.000;1.000;1.000;0.995;1.000)5'
coverage = 0.975
InterPro :
IPR000086 : NUDIX hydrolase domain
IPR015797 : NUDIX hydrolase domain-like
IPR016706 : Cleavage/polyadenylation specificity factor subunit 5
GO :
0003729 : Molecular Function : mRNA binding
0005849 : Cellular Component : mRNA cleavage factor complex
0006378 : Biological Process : mRNA polyadenylation
0016787 : Molecular Function : hydrolase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, nucl 7, cyto 7, cyto_nucl 7, E.R._mito 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013051)
HIX0013051
HIT000676999 (
ENST00000563860
)
(Cleavage/polyadenylation specificity factor subunit 5 family protein.)
genome : 56,468,239 - 56,469,124 (886)
query : 1 - 578 (578/578)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013051)
HIX0013051
HIT000679378 (
ENST00000566340
)
(Cleavage/polyadenylation specificity factor subunit 5 family protein.)
genome : 56,468,258 - 56,486,111 (17,854)
query : 1 - 581 (581/581)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 13.5, cyto_plas 12.5, nucl 3.5,
mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013051)
HIX0013051
HIT000676520 (
ENST00000563362
)
(Conserved hypothetical protein.)
genome : 56,473,039 - 56,473,647 (609)
query : 1 - 449 (449/449)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 4, cyto 4, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013051)
HIX0013051
HIT000681786 (
ENST00000568822
)
(Cleavage/polyadenylation specificity factor subunit 5 family protein.)
genome : 56,473,629 - 56,483,171 (9,543)
query : 1 - 385 (385/385)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 13.5, nucl 8.5, cyto_pero 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013051)
HIX0013051
HIT000680130 (
ENST00000567110
)
(Cleavage/polyadenylation specificity factor subunit 5 family protein.)
genome : 56,481,560 - 56,485,263 (3,704)
query : 1 - 607 (607/607)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, cyto 8, E.R._mito 8, mito_pero 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013051)
HIX0223180
HIT000676876 (
ENST00000563733
)
(Conserved hypothetical protein.)
genome : 56,485,445 - 56,492,813 (7,369)
query : 1 - 734 (734/734)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223180)
HIX0223180
HIT000682581 (
ENST00000569645
)
(Conserved hypothetical protein.)
genome : 56,485,468 - 56,487,605 (2,138)
query : 1 - 642 (642/642)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 14, cyto 6.5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223180)
HIX0223296
HIT000007588
(
AK024314
)
Representative transcript
(Conserved hypothetical protein.)
genome : 56,496,491 - 56,511,406 (14,916)
query : 1 - 2,527 (2,527/2,527)
10 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.997;
1.000;1.000;0.997)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223296)
HIX0222971
HIT000677256 (
ENST00000564123
)
(Ciliary BBSome complex subunit 2, C-terminal domain containing protein.)
genome : 56,500,748 - 56,519,650 (18,903)
query : 1 - 395 (395/395)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 6.5, cyto_nucl 5.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222971)
HIX0222971
HIT000677580 (
ENST00000564459
)
(Bardet-Biedl syndrome 2 protein family protein.)
genome : 56,504,315 - 56,531,714 (27,400)
query : 1 - 641 (641/641)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222971)
HIX0222971
HIT000028906
(
AL834176
)
Representative transcript
(Bardet-Biedl syndrome 2 protein;)
genome : 56,518,299 - 56,533,589 (15,291)
query : 1 - 2,122 (2,122/2,142)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR016616 : Bardet-Biedl syndrome 2 protein
IPR029333 : Ciliary BBSome complex subunit 2, C-terminal domain
GO :
0034464 : Cellular Component : BBSome
0035058 : Biological Process : nonmotile primary cilium assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 14.5, nucl 7.5, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222971)
HIX0222971
HIT000047163
(
AK127290
)
(Bardet-Biedl syndrome 2 protein;)
genome : 56,518,300 - 56,534,831 (16,532)
query : 1 - 4,027 (4,027/4,027)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;0.999)5'
coverage = 1.000
InterPro :
IPR016616 : Bardet-Biedl syndrome 2 protein
IPR029333 : Ciliary BBSome complex subunit 2, C-terminal domain
GO :
0034464 : Cellular Component : BBSome
0035058 : Biological Process : nonmotile primary cilium assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 16.3333, cyto_plas 13.1667,
nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222971)
HIX0222971
HIT000675991 (
ENST00000562813
)
(Bardet-Biedl syndrome 2 protein family protein.)
genome : 56,518,300 - 56,534,831 (16,532)
query : 1 - 4,026 (4,026/4,026)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 16.3333, cyto_plas 13.1667,
nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222971)
HIX0222971
HIT000682138 (
ENST00000569192
)
(Ciliary BBSome complex subunit 2, C-terminal domain containing protein.)
genome : 56,519,519 - 56,533,890 (14,372)
query : 1 - 716 (716/716)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 27, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222971)
HIX0222971
HIT000675092 (
ENST00000561877
)
(Ciliary BBSome complex subunit 2, C-terminal domain containing protein.)
genome : 56,531,688 - 56,534,858 (3,171)
query : 1 - 588 (588/588)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 9.5, cyto_nucl 9.5, nucl 8.5, extr 6, cysk 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222971)
HIX0222971
HIT000679447 (
ENST00000566410
)
(Ciliary BBSome complex subunit 2, C-terminal domain containing protein.)
genome : 56,532,402 - 56,533,835 (1,434)
query : 1 - 350 (350/350)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, cyto 12, mito 8, nucl 7, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222971)
HIX0222971
HIT000679488 (
ENST00000566452
)
(Ciliary BBSome complex subunit 2, C-terminal domain containing protein.)
genome : 56,533,613 - 56,534,857 (1,245)
query : 1 - 299 (299/299)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 8.5, cyto_nucl 8.5, nucl 7.5, extr 7, cysk 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222971)
HIX0222971
HIT000679256 (
ENST00000566210
)
(Ciliary BBSome complex subunit 2, C-terminal domain containing protein.)
genome : 56,533,698 - 56,535,088 (1,391)
query : 1 - 445 (445/445)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222971)
HIX0223063
HIT000682285 (
ENST00000569342
)
(Bardet-Biedl syndrome 2 protein family protein.)
genome : 56,535,315 - 56,553,908 (18,594)
query : 1 - 1,525 (1,525/1,525)
9 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.991;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto_nucl 6.16667, cyto_pero 5.66667, nucl 5,
cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223063)
HIX0223063
HIT000675164 (
ENST00000561951
)
(Ciliary BBSome complex subunit 2, N-terminal domain containing protein.)
genome : 56,535,559 - 56,545,190 (9,632)
query : 1 - 845 (845/845)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 11.5, cysk 6, nucl 5, mito 2,
lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223063)
HIX0223063
HIT000675068 (
ENST00000561853
)
(Ciliary BBSome complex subunit 2, middle region domain containing protein.)
genome : 56,536,134 - 56,540,075 (3,942)
query : 1 - 473 (473/473)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, mito 10, cyto_nucl 8, extr 4, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223063)
HIX0223063
HIT000427934
(
AK309068
)
Representative transcript
(Bardet-Biedl syndrome 2 protein family protein.)
genome : 56,536,280 - 56,553,908 (17,629)
query : 1 - 1,379 (1,379/1,379)
8 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.987;
1.000)5'
coverage = 1.000
InterPro :
IPR016616 : Bardet-Biedl syndrome 2 protein
IPR017986 : WD40-repeat-containing domain
IPR029333 : Ciliary BBSome complex subunit 2, C-terminal domain
IPR029429 : Ciliary BBSome complex subunit 2, middle region
IPR029430 : Ciliary BBSome complex subunit 2, N-terminal
GO :
0005515 : Molecular Function : protein binding
0034464 : Cellular Component : BBSome
0035058 : Biological Process : nonmotile primary cilium assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto_nucl 6.16667, cyto_pero 5.66667, nucl 5,
cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223063)
HIX0223063
HIT000678917 (
ENST00000565859
)
(Ciliary BBSome complex subunit 2, middle region domain containing protein.)
genome : 56,539,890 - 56,543,879 (3,990)
query : 1 - 775 (775/775)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 13, cyto 11, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223063)
HIX0223063
HIT000682863 (
ENST00000569941
)
(Ciliary BBSome complex subunit 2, N-terminal domain containing protein.)
genome : 56,543,869 - 56,550,043 (6,175)
query : 1 - 564 (564/564)
5 exons
identity = 0.996
3'(1.000;1.000;1.000;0.991;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto_nucl 4, nucl 3.5, cyto 3.5, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223063)
HIX0223063
HIT000679720 (
ENST00000566689
)
(Ciliary BBSome complex subunit 2, N-terminal domain containing protein.)
genome : 56,543,894 - 56,553,533 (9,640)
query : 1 - 578 (578/578)
5 exons
identity = 0.997
3'(1.000;1.000;1.000;0.991;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, cyto 11.5, mito 8, nucl 6.5, extr 3,
pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223063)
HIX0223063
HIT000678461 (
ENST00000565378
)
(Ciliary BBSome complex subunit 2, N-terminal domain containing protein.)
genome : 56,543,916 - 56,553,968 (10,053)
query : 1 - 574 (574/574)
5 exons
identity = 0.997
3'(1.000;1.000;1.000;0.991;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, cyto 16, nucl 10, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223063)
HIX0038647
HIT000103371 (
ENST00000219162
)
(Metallothionein-4; MT-4; Metallothionein-IV; MT-IV;)
genome : 56,598,961 - 56,602,869 (3,909)
query : 1 - 294 (294/294)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 5, mito 3, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038647)
HIX0038647
HIT000211005 (
NM_032935
)
(Metallothionein-4.)
genome : 56,598,961 - 56,602,869 (3,909)
query : 1 - 294 (294/294)
3 exons
identity = 0.993
5'(1.000;0.970;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 5, mito 3, cyto_nucl 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038647)
HIX0038647
HIT000386895
(
BC113442
)
Representative transcript
(Metallothionein-4.)
genome : 56,598,961 - 56,602,869 (3,909)
query : 1 - 294 (294/294)
3 exons
identity = 0.993
5'(1.000;0.970;1.000)3'
coverage = 1.000
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR003019 : Metallothionein superfamily, eukaryotic
IPR017854 : Metallothionein domain
IPR018064 : Metallothionein, vertebrate, metal binding site
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 5, mito 3, cyto_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038647)
Ortholog candidate ( ->
Evola
)
Canis
sp. (Dog) : AB028041
Mus
sp. (Mouse) : AK131894
Bos
sp. (Cow) : BC122856
Tetraodon
sp. (Tetraodon) : CR644629
Equus
sp. (Horse) : ENSECAT00000014386
Pongo
sp. (Orangutan) : ENSPPYT00000008665
Rattus
sp. (Rat) : ENSRNOT00000025694
Macaca
sp. (Macaque) : XM_001096721
Pan
sp. (Chimpanzee) : XM_001137744
Monodelphis
sp. (Opossum) : XM_001364931
HIX0038647
HIT000386897
(
BC113444
)
(Metallothionein-4.)
genome : 56,598,961 - 56,602,869 (3,909)
query : 1 - 294 (294/294)
3 exons
identity = 0.993
5'(1.000;0.970;1.000)3'
coverage = 1.000
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR003019 : Metallothionein superfamily, eukaryotic
IPR017854 : Metallothionein domain
IPR018064 : Metallothionein, vertebrate, metal binding site
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 5, mito 3, cyto_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038647)
HIX0013054
HIT000678897 (
ENST00000565838
)
(Metallothionein-3.)
genome : 56,622,986 - 56,624,990 (2,005)
query : 1 - 421 (421/421)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013054)
HIX0013054
HIT000674857 (
ENST00000561640
)
(Metallothionein-3; MT-3; GIFB; GIF; Growth inhibitory factor; Metallothionein-III; MT-III;)
genome : 56,622,986 - 56,624,987 (2,002)
query : 1 - 514 (514/514)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, mito 3, cyto 2, lyso 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013054)
HIX0013054
HIT000202599 (
NM_005954
)
(Metallothionein-3; MT-3; GIFB; GIF; Growth inhibitory factor; Metallothionein-III; MT-III;)
genome : 56,623,267 - 56,625,000 (1,734)
query : 1 - 582 (582/599)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto_nucl 3, nucl 2.5, cyto 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013054)
HIX0013054
HIT000102714 (
ENST00000200691
)
(Metallothionein-3; MT-3; GIFB; GIF; Growth inhibitory factor; Metallothionein-III; MT-III;)
genome : 56,623,280 - 56,625,000 (1,721)
query : 1 - 569 (569/569)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto_nucl 3, nucl 2.5, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013054)
HIX0013054
HIT000093988
(
BC035624
)
(Metallothionein-3; MT-3; Growth inhibitory factor; GIF; Metallothionein-III; MT-III;)
genome : 56,623,448 - 56,624,997 (1,550)
query : 1 - 1,550 (1,550/1,576)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR003019 : Metallothionein superfamily, eukaryotic
IPR017854 : Metallothionein domain
IPR018064 : Metallothionein, vertebrate, metal binding site
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 14.5, extr 5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013054)
HIX0013054
HIT000679487 (
ENST00000566451
)
(Metallothionein-3; MT-3; Growth inhibitory factor; GIF; Metallothionein-III; MT-III;)
genome : 56,623,448 - 56,624,997 (1,550)
query : 1 - 1,550 (1,550/1,550)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 14.5, extr 5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013054)
HIX0013054
HIT000100496
(
D13365
)
Representative transcript
(Metallothionein-3; MT-3; GIFB; GIF; Growth inhibitory factor; Metallothionein-III; MT-III;)
genome : 56,623,451 - 56,624,999 (1,549)
query : 1 - 396 (396/396)
3 exons
identity = 0.997
5'(1.000;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR003019 : Metallothionein superfamily, eukaryotic
IPR017854 : Metallothionein domain
IPR018064 : Metallothionein, vertebrate, metal binding site
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto_nucl 3, nucl 2.5, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013054)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB220447
Mus
sp. (Mouse) : AK140209
Rattus
sp. (Rat) : BC058453
Bos
sp. (Cow) : BC126773
Equus
sp. (Horse) : ENSECAT00000015904
Pongo
sp. (Orangutan) : ENSPPYT00000008666
Pan
sp. (Chimpanzee) : XM_001139417
Monodelphis
sp. (Opossum) : XM_001365082
Canis
sp. (Dog) : XM_863023
HIX0013054
HIT000683086 (
ENST00000570176
)
(Metallothionein-3.)
genome : 56,623,452 - 56,624,278 (827)
query : 1 - 579 (579/579)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto_nucl 6, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013054)
HIX0013054
HIT000036114
(
BC013081
)
(Metallothionein-3; MT-3; GIFB; GIF; Growth inhibitory factor; Metallothionein-III; MT-III;)
genome : 56,623,456 - 56,624,997 (1,542)
query : 1 - 390 (390/404)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR003019 : Metallothionein superfamily, eukaryotic
IPR017854 : Metallothionein domain
IPR018064 : Metallothionein, vertebrate, metal binding site
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto_nucl 3, nucl 2.5, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013054)
HIX0013054
HIT000679611 (
ENST00000566576
)
(Metallothionein; AnMT; MT;)
genome : 56,623,457 - 56,625,000 (1,544)
query : 1 - 448 (448/448)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 8.5, cyto_nucl 7, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013054)
HIX0013054
HIT000098756
(
BC047694
)
(Metallothionein-3; MT-3; Growth inhibitory factor; GIF; Metallothionein-III; MT-III;)
genome : 56,623,458 - 56,624,997 (1,540)
query : 1 - 1,540 (1,540/1,594)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR003019 : Metallothionein superfamily, eukaryotic
IPR017854 : Metallothionein domain
IPR018064 : Metallothionein, vertebrate, metal binding site
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 14.5, extr 5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013054)
HIX0013054
HIT000099950
(
BT007030
)
(Metallothionein-3; MT-3; GIFB; GIF; Growth inhibitory factor; Metallothionein-III; MT-III;)
genome : 56,623,503 - 56,624,859 (1,357)
query : 1 - 205 (205/207)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.990
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR003019 : Metallothionein superfamily, eukaryotic
IPR017854 : Metallothionein domain
IPR018064 : Metallothionein, vertebrate, metal binding site
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto_nucl 3, nucl 2.5, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013054)
HIX0013054
HIT000324359
(
X89604
)
(Metallothionein-3; MT-3; GIFB; GIF; Growth inhibitory factor; Metallothionein-III; MT-III;)
genome : 56,623,503 - 56,624,861 (1,359)
query : 1 - 207 (207/207)
3 exons
identity = 0.995
5'(1.000;1.000;0.991)3'
coverage = 1.000
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR003019 : Metallothionein superfamily, eukaryotic
IPR017854 : Metallothionein domain
IPR018064 : Metallothionein, vertebrate, metal binding site
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto_nucl 3, nucl 2.5, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013054)
HIX0021628
HIT000105507 (
ENST00000245185
)
(Metallothionein superfamily, eukaryotic protein.)
genome : 56,642,111 - 56,643,409 (1,299)
query : 1 - 786 (786/786)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021628)
HIX0021628
HIT000202598 (
NM_005953
)
(Metallothionein superfamily, eukaryotic protein.)
genome : 56,642,478 - 56,643,409 (932)
query : 1 - 419 (419/466)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29, cyto_nucl 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021628)
HIX0021628
HIT000260398
(
BC062435
)
(Metallothionein-II, hippocampal; MT-2;)
genome : 56,642,496 - 56,643,409 (914)
query : 5 - 319 (315/430)
3 exons
identity = 0.984
5'(1.000;0.925;0.989)3'
coverage = 0.987
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR017854 : Metallothionein domain
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021628)
HIX0021628
HIT000032999
(
BC007034
)
Representative transcript
(Metallothionein-2; MT-2; Metallothionein-2A; Metallothionein-II; MT-II;)
genome : 56,642,496 - 56,643,409 (914)
query : 4 - 404 (401/451)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.993
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR003019 : Metallothionein superfamily, eukaryotic
IPR017854 : Metallothionein domain
IPR018064 : Metallothionein, vertebrate, metal binding site
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29, cyto_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021628)
HIX0021628
HIT000677122 (
ENST00000563985
)
(Metallothionein superfamily, eukaryotic protein.)
genome : 56,642,496 - 56,643,388 (893)
query : 1 - 688 (688/688)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 2, mito 2, lyso 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021628)
HIX0021628
HIT000101271
(
D28442
)
(Non-protein coding transcript.)
genome : 56,642,496 - 56,642,573 (78)
query : 1 - 78 (78/78)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021628)
HIX0021628
HIT000264247
(
BC070289
)
(Metallothionein-2; MT-2; Metallothionein-2A; Metallothionein-II; MT-II;)
genome : 56,642,499 - 56,643,409 (911)
query : 1 - 398 (398/424)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR003019 : Metallothionein superfamily, eukaryotic
IPR017854 : Metallothionein domain
IPR018064 : Metallothionein, vertebrate, metal binding site
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29, cyto_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021628)
HIX0021628
HIT000675228 (
ENST00000562017
)
(Metallothionein superfamily, eukaryotic protein.)
genome : 56,642,507 - 56,643,409 (903)
query : 1 - 903 (903/903)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 7, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021628)
HIX0021628
HIT000320841
(
V00594
)
(Metallothionein-2; MT-2; Metallothionein-2A; Metallothionein-II; MT-II;)
genome : 56,642,511 - 56,643,395 (885)
query : 1 - 372 (372/372)
3 exons
identity = 0.987
5'(0.988;0.955;0.995)3'
coverage = 1.000
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR003019 : Metallothionein superfamily, eukaryotic
IPR017854 : Metallothionein domain
IPR018064 : Metallothionein, vertebrate, metal binding site
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29, cyto_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021628)
HIX0021628
HIT000674713 (
ENST00000561491
)
(Metallothionein superfamily, eukaryotic protein.)
genome : 56,642,518 - 56,643,406 (889)
query : 1 - 581 (581/581)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 7.5, cyto_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021628)
HIX0021628
HIT000195067
(
M26637
)
(Metallothionein-2; MT-2; Metallothionein-2A; Metallothionein-II; MT-II;)
genome : 56,642,561 - 56,643,273 (713)
query : 1 - 200 (200/200)
3 exons
identity = 0.995
5'(1.000;1.000;0.990)3'
coverage = 1.000
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR003019 : Metallothionein superfamily, eukaryotic
IPR017854 : Metallothionein domain
IPR018064 : Metallothionein, vertebrate, metal binding site
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29, cyto_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021628)
HIX0021628
HIT000324983
(
X97260
)
(Metallothionein-2; MT-2; Metallothionein-2A; Metallothionein-II; MT-II;)
genome : 56,642,568 - 56,643,408 (841)
query : 1 - 327 (327/327)
3 exons
identity = 0.988
5'(0.929;1.000;0.991)3'
coverage = 1.000
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR003019 : Metallothionein superfamily, eukaryotic
IPR017854 : Metallothionein domain
IPR018064 : Metallothionein, vertebrate, metal binding site
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29, cyto_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021628)
HIX0021628
HIT000100235
(
BT007315
)
(Metallothionein-2; MT-2; Metallothionein-2A; Metallothionein-II; MT-II;)
genome : 56,642,568 - 56,643,264 (697)
query : 1 - 184 (184/186)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.989
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR003019 : Metallothionein superfamily, eukaryotic
IPR017854 : Metallothionein domain
IPR018064 : Metallothionein, vertebrate, metal binding site
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29, cyto_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021628)
HIX0021628
HIT000215696
(
S52379
)
(Metallothionein-2; MT-2; Metallothionein-2A; Metallothionein-II; MT-II;)
genome : 56,642,568 - 56,643,266 (699)
query : 1 - 186 (186/186)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR003019 : Metallothionein superfamily, eukaryotic
IPR017854 : Metallothionein domain
IPR018064 : Metallothionein, vertebrate, metal binding site
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29, cyto_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021628)
HIX0021628
HIT000108436_04 (
ENST00000262499
)
(Metallothionein superfamily, eukaryotic protein.)
genome : 56,642,568 - 56,643,263 (696)
query : 1 - 183 (183/183)
3 exons
identity = 0.973
5'(0.929;0.985;0.978)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 3.5, cyto_nucl 3.5, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021628)
HIX0021628
HIT000680315 (
ENST00000567300
)
(Metallothionein superfamily, eukaryotic protein.)
genome : 56,642,602 - 56,643,409 (808)
query : 1 - 416 (416/416)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 4.5, cyto_nucl 4.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021628)
HIX0223857
HIT000682710 (
ENST00000569778
)
(Hypothetical short protein.)
genome : 56,643,413 - 56,645,287 (1,875)
query : 1 - 444 (444/444)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
This sequence is too short.
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223857)
HIX0223041
HIT000264306
(
BC070351
)
(Conserved hypothetical protein.)
genome : 56,651,373 - 56,652,727 (1,355)
query : 1 - 424 (424/449)
3 exons
identity = 0.993
5'(0.992;0.985;0.996)3'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, mito_nucl 16, mito 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223041)
HIX0223041
HIT000320664 (
NR_001447
)
(Conserved hypothetical protein.)
genome : 56,651,373 - 56,652,730 (1,358)
query : 1 - 426 (426/443)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto_nucl 5, extr 4, nucl 4, cyto 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223041)
HIX0223041
HIT000678828 (
ENST00000565768
)
(Conserved hypothetical protein.)
genome : 56,651,388 - 56,652,730 (1,343)
query : 1 - 411 (411/411)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.3333, extr 9, cyto 8.5, nucl 8, mito 6,
cyto_pero 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223041)
HIX0223041
HIT000324984
(
X97261
)
Representative transcript
(Metallothionein-1L; MT-1L; Metallothionein-IL; MT-IL;)
genome : 56,651,475 - 56,652,744 (1,270)
query : 1 - 332 (332/332)
3 exons
identity = 0.959
5'(0.964;0.985;0.951)3'
coverage = 1.000
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR003019 : Metallothionein superfamily, eukaryotic
IPR017854 : Metallothionein domain
IPR018064 : Metallothionein, vertebrate, metal binding site
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223041)
HIX0223041
HIT000679405 (
ENST00000566367
)
(Metallothionein-1L; MT-1L; Metallothionein-IL; MT-IL;)
genome : 56,651,475 - 56,652,140 (666)
query : 1 - 78 (78/78)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223041)
HIX0013056
HIT000034514
(
BC009699
)
Representative transcript
(Metallothionein-1E; MT-1E; Metallothionein-IE; MT-IE;)
genome : 56,659,387 - 56,661,023 (1,637)
query : 1 - 703 (703/717)
3 exons
identity = 0.999
5'(0.998;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR003019 : Metallothionein superfamily, eukaryotic
IPR017854 : Metallothionein domain
IPR018064 : Metallothionein, vertebrate, metal binding site
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto_nucl 2, nucl 1.5, cyto 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013056)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB173509
Pongo
sp. (Orangutan) : ENSPPYT00000018520
Pan
sp. (Chimpanzee) : XM_001138175
HIX0013056
HIT000117227 (
ENST00000306061
)
(Metallothionein-1E; MT-1E; Metallothionein-IE; MT-IE;)
genome : 56,659,387 - 56,661,024 (1,638)
query : 1 - 704 (704/704)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto_nucl 2, nucl 1.5, cyto 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013056)
HIX0013056
HIT000215276 (
NM_175617
)
(Metallothionein-1E; MT-1E; Metallothionein-IE; MT-IE;)
genome : 56,659,585 - 56,661,023 (1,439)
query : 1 - 505 (505/519)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto_nucl 2, nucl 1.5, cyto 1.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013056)
HIX0013056
HIT000390571
(
BC131609
)
(Metallothionein-1E; MT-1E; Metallothionein-IE; MT-IE;)
genome : 56,659,680 - 56,660,936 (1,257)
query : 1 - 323 (323/323)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR003019 : Metallothionein superfamily, eukaryotic
IPR017854 : Metallothionein domain
IPR018064 : Metallothionein, vertebrate, metal binding site
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto_nucl 2, nucl 1.5, cyto 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013056)
HIX0013056
HIT000260625
(
BC062734
)
(Metallothionein-1E; MT-1E; Metallothionein-IE; MT-IE;)
genome : 56,659,693 - 56,661,023 (1,331)
query : 6 - 402 (397/432)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.983
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR003019 : Metallothionein superfamily, eukaryotic
IPR017854 : Metallothionein domain
IPR018064 : Metallothionein, vertebrate, metal binding site
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto_nucl 2, nucl 1.5, cyto 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013056)
HIX0013056
HIT000681277 (
ENST00000568293
)
(Metallothionein-1E.)
genome : 56,659,693 - 56,661,024 (1,332)
query : 1 - 332 (332/332)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013056)
HIX0013056
HIT000126670 (
ENST00000330439
)
(Metallothionein-1E.)
genome : 56,659,710 - 56,661,024 (1,315)
query : 1 - 729 (729/729)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto_nucl 4, nucl 3.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013056)
HIX0013056
HIT000080817
(
AF495759
)
(Metallothionein-1E.)
genome : 56,659,718 - 56,661,024 (1,307)
query : 1 - 721 (721/722)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.999
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR003019 : Metallothionein superfamily, eukaryotic
IPR017854 : Metallothionein domain
IPR018064 : Metallothionein, vertebrate, metal binding site
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto_nucl 4, nucl 3.5, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013056)
HIX0013056
HIT000216266
(
S68949
)
(Non-protein coding transcript.)
genome : 56,659,764 - 56,660,442 (679)
query : 1 - 93 (93/93)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013056)
HIX0202307
HIT000361097 (
ENST00000379818
)
(Metallothionein superfamily, eukaryotic protein.)
genome : 56,666,145 - 56,667,898 (1,754)
query : 1 - 829 (829/829)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202307)
HIX0202307
HIT000215428 (
NM_176870
)
(Metallothionein superfamily, eukaryotic protein.)
genome : 56,666,534 - 56,667,898 (1,365)
query : 1 - 440 (440/464)
3 exons
identity = 0.998
5'(1.000;0.985;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 5, cyto 3, mito_nucl 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202307)
HIX0202307
HIT000242733
(
AF136177
)
Representative transcript
(Metallothionein-1M.)
genome : 56,666,565 - 56,667,898 (1,334)
query : 9 - 417 (409/441)
3 exons
identity = 0.995
5'(1.000;0.985;0.996)3'
coverage = 0.981
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR003019 : Metallothionein superfamily, eukaryotic
IPR017854 : Metallothionein domain
IPR018064 : Metallothionein, vertebrate, metal binding site
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 5, cyto 3, mito_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202307)
HIX0202307
HIT000040511
(
BC028280
)
(Metallothionein-1M.)
genome : 56,666,572 - 56,667,892 (1,321)
query : 1 - 396 (396/431)
3 exons
identity = 0.995
5'(1.000;0.985;0.996)3'
coverage = 1.000
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR003019 : Metallothionein superfamily, eukaryotic
IPR017854 : Metallothionein domain
IPR018064 : Metallothionein, vertebrate, metal binding site
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 5, cyto 3, mito_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202307)
HIX0202307
HIT000337393
(
BC103841
)
(Metallothionein-1M.)
genome : 56,666,589 - 56,667,807 (1,219)
query : 1 - 294 (294/294)
3 exons
identity = 0.983
5'(0.964;0.985;0.993)3'
coverage = 1.000
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR003019 : Metallothionein superfamily, eukaryotic
IPR017854 : Metallothionein domain
IPR018064 : Metallothionein, vertebrate, metal binding site
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 5, cyto 3, mito_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202307)
HIX0202307
HIT000683142 (
ENST00000570233
)
(Metallothionein superfamily, eukaryotic protein.)
genome : 56,666,619 - 56,667,430 (812)
query : 1 - 232 (232/232)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202307)
HIX0202307
HIT000532067_03 (
ENST00000434133
)
(Metallothionein superfamily, eukaryotic protein.)
genome : 56,666,644 - 56,670,789 (4,146)
query : 1 - 120 (120/120)
3 exons
identity = 0.992
5'(1.000;1.000;0.962)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 2.5, cyto_nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202307)
HIX0202307
HIT000078173
(
AF348994
)
(Conserved hypothetical protein.)
genome : 56,669,651 - 56,670,998 (1,348)
query : 1 - 408 (408/408)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202307)
HIX0202307
HIT000541957 (
ENST00000444023
)
(Conserved hypothetical protein.)
genome : 56,669,651 - 56,670,998 (1,348)
query : 1 - 408 (408/408)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202307)
HIX0202307
HIT000659700 (
NR_036677
)
(Conserved hypothetical protein.)
genome : 56,669,651 - 56,670,998 (1,348)
query : 1 - 408 (408/408)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, nucl 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202307)
HIX0202307
HIT000676553 (
ENST00000563395
)
(Conserved hypothetical protein.)
genome : 56,669,651 - 56,670,998 (1,348)
query : 1 - 408 (408/408)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202307)
HIX0202307
HIT000337391
(
BC103839
)
(Conserved hypothetical protein.)
genome : 56,669,675 - 56,670,908 (1,234)
query : 1 - 887 (887/887)
2 exons
identity = 0.998
5'(0.997;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, nucl 6, cyto_nucl 4.5, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202307)
HIX0202307
HIT000677680 (
ENST00000564564
)
(Conserved hypothetical protein.)
genome : 56,669,675 - 56,670,908 (1,234)
query : 1 - 887 (887/887)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, nucl 6, cyto_nucl 4.5, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202307)
HIX0222985
HIT000202592 (
NM_005946
)
(Metallothionein-1A; MT-1A; Metallothionein-IA; MT-IA;)
genome : 56,672,578 - 56,673,998 (1,421)
query : 1 - 395 (395/468)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto_nucl 2, nucl 1.5, cyto 1.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222985)
HIX0222985
HIT000250656
(
AY028617
)
Representative transcript
(Metallothionein-1A; MT-1A; Metallothionein-IA; MT-IA;)
genome : 56,672,578 - 56,673,999 (1,422)
query : 1 - 396 (396/424)
3 exons
identity = 0.972
5'(1.000;1.000;0.952)3'
coverage = 0.934
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR003019 : Metallothionein superfamily, eukaryotic
IPR017854 : Metallothionein domain
IPR018064 : Metallothionein, vertebrate, metal binding site
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto_nucl 2, nucl 1.5, cyto 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222985)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : BC049475
Canis
sp. (Dog) : ENSCAFT00000014488
Gallus
sp. (Chicken) : ENSGALT00000023565
Monodelphis
sp. (Opossum) : ENSMODT00000040198
Pan
sp. (Chimpanzee) : ENSPTRT00000015005
Macaca
sp. (Macaque) : XM_001097779
HIX0222985
HIT000113325_03 (
ENST00000290705
)
(Metallothionein-1A; MT-1A; Metallothionein-IA; MT-IA;)
genome : 56,672,578 - 56,673,999 (1,422)
query : 1 - 396 (396/396)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto_nucl 2, nucl 1.5, cyto 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222985)
HIX0222985
HIT000040767
(
BC029475
)
(Metallothionein-1A; MT-1A; Metallothionein-IA; MT-IA;)
genome : 56,672,581 - 56,673,998 (1,418)
query : 1 - 392 (392/465)
3 exons
identity = 0.997
5'(1.000;0.985;1.000)3'
coverage = 1.000
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR003019 : Metallothionein superfamily, eukaryotic
IPR017854 : Metallothionein domain
IPR018064 : Metallothionein, vertebrate, metal binding site
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto_nucl 2, nucl 1.5, cyto 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222985)
HIX0222985
HIT000078174
(
AF348995
)
(Metallothionein-1A; MT-1A; Metallothionein-IA; MT-IA;)
genome : 56,672,596 - 56,673,999 (1,404)
query : 1 - 378 (378/406)
3 exons
identity = 0.971
5'(1.000;1.000;0.952)3'
coverage = 0.931
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR003019 : Metallothionein superfamily, eukaryotic
IPR017854 : Metallothionein domain
IPR018064 : Metallothionein, vertebrate, metal binding site
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto_nucl 2, nucl 1.5, cyto 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222985)
HIX0202322
HIT000078178
(
AF348999
)
Representative transcript
(Conserved hypothetical protein.)
genome : 56,677,599 - 56,679,162 (1,564)
query : 1 - 435 (435/435)
4 exons
identity = 0.986
5'(1.000;1.000;0.955;0.995)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 6.5, cyto 6, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202322)
HIX0202322
HIT000563638 (
NR_027781
)
(Conserved hypothetical protein.)
genome : 56,677,599 - 56,678,853 (1,255)
query : 1 - 364 (364/376)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 9, nucl 8.5, cyto 6.5, mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202322)
HIX0202322
HIT000390105
(
BC130315
)
(Conserved hypothetical protein.)
genome : 56,677,617 - 56,678,698 (1,082)
query : 1 - 191 (191/191)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 9, cyto 5.5, cyto_nucl 5, mito_pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202322)
HIX0202322
HIT000390107
(
BC130317
)
(Conserved hypothetical protein.)
genome : 56,677,617 - 56,678,698 (1,082)
query : 1 - 191 (191/191)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 9, cyto 5.5, cyto_nucl 5, mito_pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202322)
HIX0202322
HIT000568273 (
ENST00000463480
)
(Conserved hypothetical protein.)
genome : 56,677,617 - 56,678,698 (1,082)
query : 1 - 191 (191/191)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 9, cyto 5.5, cyto_nucl 5, mito_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202322)
HIX0202322
HIT000590298 (
ENST00000486551
)
(Metallothionein superfamily, eukaryotic protein.)
genome : 56,677,637 - 56,678,677 (1,041)
query : 1 - 150 (150/150)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 3, cyto 3, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202322)
HIX0202322
HIT000486358 (
NR_003658
)
(Conserved hypothetical protein.)
genome : 56,677,716 - 56,678,853 (1,138)
query : 1 - 503 (503/503)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, nucl 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202322)
HIX0059563
HIT000680074 (
ENST00000567054
)
(Metallothionein-2.)
genome : 56,682,732 - 56,683,426 (695)
query : 12 - 174 (163/174)
2 exons
identity = 0.964
5'(0.959;0.967)3'
coverage = 0.937
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 5, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059563)
HIX0059563
HIT000361095 (
ENST00000379816
)
(Metallothionein-2.)
genome : 56,682,743 - 56,683,426 (684)
query : 1 - 153 (153/153)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059563)
HIX0059563
HIT000681582 (
ENST00000568608
)
(Non-protein coding transcript.)
genome : 56,682,793 - 56,686,548 (3,756)
query : 1 - 244 (244/244)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059563)
HIX0059563
HIT000084911
(
AY168638
)
Representative transcript
(Metallothionein-1B; MT-1B; Metallothionein-IB; MT-IB;)
genome : 56,685,811 - 56,687,116 (1,306)
query : 2 - 381 (380/404)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.997
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR003019 : Metallothionein superfamily, eukaryotic
IPR017854 : Metallothionein domain
IPR018064 : Metallothionein, vertebrate, metal binding site
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29, cyto_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059563)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000009031
Pan
sp. (Chimpanzee) : XM_531352
HIX0059563
HIT000202593 (
NM_005947
)
(Metallothionein-1B; MT-1B; Metallothionein-IB; MT-IB;)
genome : 56,685,811 - 56,687,116 (1,306)
query : 1 - 380 (380/403)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29, cyto_nucl 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059563)
HIX0059563
HIT000128900 (
ENST00000334346
)
(Metallothionein-1B; MT-1B; Metallothionein-IB; MT-IB;)
genome : 56,685,811 - 56,687,116 (1,306)
query : 1 - 380 (380/380)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059563)
HIX0059563
HIT000078179
(
AF349000
)
(Metallothionein-1B; MT-1B; Metallothionein-IB; MT-IB;)
genome : 56,685,812 - 56,687,116 (1,305)
query : 1 - 381 (381/386)
3 exons
identity = 0.995
5'(1.000;1.000;0.991)3'
coverage = 0.987
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR003019 : Metallothionein superfamily, eukaryotic
IPR017854 : Metallothionein domain
IPR018064 : Metallothionein, vertebrate, metal binding site
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29, cyto_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059563)
HIX0059563
HIT000263572
(
BC069421
)
(Metallothionein-1B; MT-1B; Metallothionein-IB; MT-IB;)
genome : 56,685,816 - 56,687,027 (1,212)
query : 1 - 286 (286/286)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR003019 : Metallothionein superfamily, eukaryotic
IPR017854 : Metallothionein domain
IPR018064 : Metallothionein, vertebrate, metal binding site
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29, cyto_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059563)
HIX0059563
HIT000675600 (
ENST00000562399
)
(Metallothionein-1B; MT-1B; Metallothionein-IB; MT-IB;)
genome : 56,685,838 - 56,687,116 (1,279)
query : 1 - 351 (351/351)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059563)
HIX0059563
HIT000501373
(
BC137478
)
(Metallothionein-1B; MT-1B; Metallothionein-IB; MT-IB;)
genome : 56,685,844 - 56,686,996 (1,153)
query : 1 - 227 (227/227)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR003019 : Metallothionein superfamily, eukaryotic
IPR017854 : Metallothionein domain
IPR018064 : Metallothionein, vertebrate, metal binding site
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29, cyto_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059563)
HIX0059563
HIT000501374
(
BC137479
)
(Metallothionein-1B; MT-1B; Metallothionein-IB; MT-IB;)
genome : 56,685,844 - 56,686,996 (1,153)
query : 1 - 227 (227/227)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR003019 : Metallothionein superfamily, eukaryotic
IPR017854 : Metallothionein domain
IPR018064 : Metallothionein, vertebrate, metal binding site
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29, cyto_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059563)
HIX0013058
HIT000128903 (
ENST00000334350
)
(Metallothionein-1F; MT-1F; Metallothionein-IF; MT-IF;)
genome : 56,691,606 - 56,693,215 (1,610)
query : 1 - 690 (690/690)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 2, mito 2, cyto_mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013058)
HIX0013058
HIT000339126
(
BC108722
)
(Conserved hypothetical protein.)
genome : 56,691,643 - 56,693,215 (1,573)
query : 1 - 1,573 (1,573/1,640)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 5, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013058)
HIX0223552
HIT000677423 (
ENST00000564295
)
(Conserved hypothetical protein.)
genome : 56,691,643 - 56,693,215 (1,573)
query : 1 - 1,573 (1,573/1,573)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 13, cyto 11, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223552)
HIX0013058
HIT000040764
(
BC029453
)
Representative transcript
(Metallothionein-1F; MT-1F; Metallothionein-IF; MT-IF;)
genome : 56,691,855 - 56,693,212 (1,358)
query : 1 - 437 (437/468)
3 exons
identity = 0.998
5'(1.000;1.000;0.996)3'
coverage = 0.995
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR003019 : Metallothionein superfamily, eukaryotic
IPR017854 : Metallothionein domain
IPR018064 : Metallothionein, vertebrate, metal binding site
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 2, mito 2, cyto_mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013058)
Ortholog candidate ( ->
Evola
)
Tetraodon
sp. (Tetraodon) : CR649879
Canis
sp. (Dog) : ENSCAFT00000014491
Pongo
sp. (Orangutan) : ENSPPYT00000009091
Macaca
sp. (Macaque) : XM_001093253
Pan
sp. (Chimpanzee) : XM_001138175
Monodelphis
sp. (Opossum) : XM_001365151
HIX0013058
HIT000202594 (
NM_005949
)
(Metallothionein-1F; MT-1F; Metallothionein-IF; MT-IF;)
genome : 56,691,855 - 56,693,215 (1,361)
query : 1 - 441 (441/456)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 2, mito 2, cyto_mito 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013058)
HIX0013058
HIT000477910 (
ENST00000394501
)
(Metallothionein-1F; MT-1F; Metallothionein-IF; MT-IF;)
genome : 56,691,855 - 56,693,214 (1,360)
query : 1 - 443 (443/443)
3 exons
identity = 0.993
5'(1.000;0.957;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 2, mito 2, cyto_mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013058)
HIX0013058
HIT000681453 (
ENST00000568475
)
(Metallothionein-1F.)
genome : 56,691,924 - 56,693,217 (1,294)
query : 1 - 416 (416/416)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 4, nucl 2, mito 2, cyto_pero 2,
cyto_plas 2, cyto_golg 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013058)
HIX0013058
HIT000592867_02 (
ENST00000489257
)
(Metallothionein-1H.)
genome : 56,691,971 - 56,704,901 (12,931)
query : 1 - 186 (186/186)
3 exons
identity = 0.968
5'(1.000;0.970;0.957)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013058)
HIX0013058
HIT000680676 (
ENST00000567672
)
(Hypothetical short protein.)
genome : 56,693,146 - 56,694,610 (1,465)
query : 1 - 317 (317/317)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013058)
HIX0021664
HIT000093812
(
BC035287
)
(Metallothionein-2A; MT-2A; Metallothionein-IIA; MT-IIA;)
genome : 56,700,647 - 56,701,964 (1,318)
query : 1 - 1,318 (1,318/1,400)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR017854 : Metallothionein domain
IPR018064 : Metallothionein, vertebrate, metal binding site
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, extr 9, cyto 3, cyto_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021664)
HIX0021664
HIT000098984
(
BC048334
)
(Metallothionein-2A; MT-2A; Metallothionein-IIA; MT-IIA;)
genome : 56,700,647 - 56,701,964 (1,318)
query : 1 - 1,318 (1,318/1,375)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR017854 : Metallothionein domain
IPR018064 : Metallothionein, vertebrate, metal binding site
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, extr 9, cyto 3, cyto_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021664)
HIX0021664
HIT000038941
(
BC020757
)
Representative transcript
(Metallothionein-1G; MT-1G; Metallothionein-1K; MT-1K; Metallothionein-IG; MT-IG;)
genome : 56,700,647 - 56,701,977 (1,331)
query : 1 - 405 (405/434)
3 exons
identity = 0.998
3'(0.996;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR003019 : Metallothionein superfamily, eukaryotic
IPR017854 : Metallothionein domain
IPR018064 : Metallothionein, vertebrate, metal binding site
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 2, mito 2, cyto_mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021664)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : BC111615
Pongo
sp. (Orangutan) : ENSPPYT00000009092
Pan
sp. (Chimpanzee) : ENSPTRT00000015007
Macaca
sp. (Macaque) : XM_001098159
Monodelphis
sp. (Opossum) : XM_001373244
HIX0021664
HIT000086512
(
BC005311
)
(Metallothionein-1G; MT-1G; Metallothionein-1K; MT-1K; Metallothionein-IG; MT-IG;)
genome : 56,700,650 - 56,701,977 (1,328)
query : 1 - 892 (892/923)
2 exons
identity = 0.994
3'(0.992;0.995)5'
coverage = 0.998
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR003019 : Metallothionein superfamily, eukaryotic
IPR017854 : Metallothionein domain
IPR018064 : Metallothionein, vertebrate, metal binding site
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021664)
HIX0021664
HIT000542771 (
ENST00000444837
)
(Metallothionein-1G; MT-1G; Metallothionein-1K; MT-1K; Metallothionein-IG; MT-IG;)
genome : 56,700,643 - 56,701,977 (1,335)
query : 1 - 406 (406/406)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021664)
HIX0021664
HIT000361090 (
ENST00000379811
)
(Metallothionein-1G; MT-1G; Metallothionein-1K; MT-1K; Metallothionein-IG; MT-IG;)
genome : 56,700,647 - 56,701,977 (1,331)
query : 1 - 405 (405/405)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 2, mito 2, cyto_mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021664)
HIX0021664
HIT000682441 (
ENST00000569500
)
(Metallothionein-1G.)
genome : 56,700,647 - 56,701,946 (1,300)
query : 1 - 305 (305/305)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 2, mito 2, cyto_mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021664)
HIX0021664
HIT000202595 (
NM_005950
)
(Metallothionein-1G; MT-1G; Metallothionein-1K; MT-1K; Metallothionein-IG; MT-IG;)
genome : 56,700,653 - 56,701,977 (1,325)
query : 1 - 396 (396/396)
3 exons
identity = 0.992
3'(0.987;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021664)
HIX0021664
HIT000681648 (
ENST00000568675
)
(Metallothionein-1G; MT-1G; Metallothionein-1K; MT-1K; Metallothionein-IG; MT-IG;)
genome : 56,700,718 - 56,701,933 (1,216)
query : 1 - 628 (628/628)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021664)
HIX0021664
HIT000216267
(
S68954
)
(Non-protein coding transcript.)
genome : 56,701,225 - 56,701,905 (681)
query : 1 - 93 (93/93)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021664)
HIX0013058
HIT000033770
(
BC008408
)
(Metallothionein-1H; MT-1H; Metallothionein-0; MT-0; Metallothionein-IH; MT-IH;)
genome : 56,703,726 - 56,705,037 (1,312)
query : 1 - 394 (394/422)
3 exons
identity = 0.995
5'(1.000;0.985;0.996)3'
coverage = 0.995
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR003019 : Metallothionein superfamily, eukaryotic
IPR017854 : Metallothionein domain
IPR018064 : Metallothionein, vertebrate, metal binding site
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 1, cyto 1, mito 1, cyto_nucl 1, lyso 1,
cyto_mito 1, mito_nucl 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013058)
HIX0013058
HIT000127746 (
ENST00000332374
)
(Metallothionein-1H; MT-1H; Metallothionein-0; MT-0; Metallothionein-IH; MT-IH;)
genome : 56,703,726 - 56,705,041 (1,316)
query : 1 - 397 (397/397)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 1, cyto 1, mito 1, cyto_nucl 1, lyso 1,
cyto_mito 1, mito_nucl 1
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013058)
HIX0013058
HIT000202596 (
NM_005951
)
(Metallothionein-1H; MT-1H; Metallothionein-0; MT-0; Metallothionein-IH; MT-IH;)
genome : 56,703,726 - 56,705,041 (1,316)
query : 1 - 397 (397/397)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 1, cyto 1, mito 1, cyto_nucl 1, lyso 1,
cyto_mito 1, mito_nucl 1
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013058)
HIX0013058
HIT000260014
(
BC059780
)
(Metallothionein-1H; MT-1H; Metallothionein-0; MT-0; Metallothionein-IH; MT-IH;)
genome : 56,703,746 - 56,705,041 (1,296)
query : 1 - 377 (377/429)
3 exons
identity = 0.997
5'(0.987;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR003019 : Metallothionein superfamily, eukaryotic
IPR017854 : Metallothionein domain
IPR018064 : Metallothionein, vertebrate, metal binding site
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 1, cyto 1, mito 1, cyto_nucl 1, lyso 1,
cyto_mito 1, mito_nucl 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013058)
HIX0013058
HIT000682103 (
ENST00000569155
)
(Metallothionein-1H.)
genome : 56,703,752 - 56,705,041 (1,290)
query : 1 - 697 (697/697)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 3, cyto 1, mito 1, lyso 1, golg 1,
cyto_mito 1, cyto_golg 1
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013058)
HIX0013058
HIT000322669
(
X64177
)
(Metallothionein-1H; MT-1H; Metallothionein-0; MT-0; Metallothionein-IH; MT-IH;)
genome : 56,703,774 - 56,705,041 (1,268)
query : 1 - 349 (349/367)
3 exons
identity = 0.994
5'(1.000;1.000;0.991)3'
coverage = 1.000
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR003019 : Metallothionein superfamily, eukaryotic
IPR017854 : Metallothionein domain
IPR018064 : Metallothionein, vertebrate, metal binding site
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 1, cyto 1, mito 1, cyto_nucl 1, lyso 1,
cyto_mito 1, mito_nucl 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013058)
HIX0013058
HIT000503187
(
BC146930
)
(Metallothionein-1H; MT-1H; Metallothionein-0; MT-0; Metallothionein-IH; MT-IH;)
genome : 56,703,775 - 56,704,931 (1,157)
query : 1 - 238 (238/238)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR003019 : Metallothionein superfamily, eukaryotic
IPR017854 : Metallothionein domain
IPR018064 : Metallothionein, vertebrate, metal binding site
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 1, cyto 1, mito 1, cyto_nucl 1, lyso 1,
cyto_mito 1, mito_nucl 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013058)
HIX0013058
HIT000503191
(
BC146934
)
(Metallothionein-1H; MT-1H; Metallothionein-0; MT-0; Metallothionein-IH; MT-IH;)
genome : 56,703,775 - 56,704,931 (1,157)
query : 1 - 238 (238/238)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR003019 : Metallothionein superfamily, eukaryotic
IPR017854 : Metallothionein domain
IPR018064 : Metallothionein, vertebrate, metal binding site
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 1, cyto 1, mito 1, cyto_nucl 1, lyso 1,
cyto_mito 1, mito_nucl 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013058)
HIX0013058
HIT000100091
(
BT007171
)
(Metallothionein-1H; MT-1H; Metallothionein-0; MT-0; Metallothionein-IH; MT-IH;)
genome : 56,703,797 - 56,704,899 (1,103)
query : 1 - 184 (184/186)
3 exons
identity = 0.995
5'(1.000;0.985;1.000)3'
coverage = 0.989
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR003019 : Metallothionein superfamily, eukaryotic
IPR017854 : Metallothionein domain
IPR018064 : Metallothionein, vertebrate, metal binding site
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 1, cyto 1, mito 1, cyto_nucl 1, lyso 1,
cyto_mito 1, mito_nucl 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013058)
HIX0013058
HIT000216265
(
S68948
)
(Non-protein coding transcript.)
genome : 56,703,797 - 56,704,482 (686)
query : 1 - 93 (93/93)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013058)
HIX0223010
HIT000486369 (
NR_003669
)
(Conserved hypothetical protein.)
genome : 56,709,649 - 56,711,653 (2,005)
query : 1 - 2,005 (2,005/2,005)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223010)
HIX0223010
HIT000078176
(
AF348997
)
Representative transcript
(Metallothionein-1X.)
genome : 56,710,028 - 56,711,789 (1,762)
query : 1 - 395 (395/395)
3 exons
identity = 0.985
5'(1.000;0.925;0.996)3'
coverage = 1.000
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR003019 : Metallothionein superfamily, eukaryotic
IPR017854 : Metallothionein domain
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 7, cyto 2.5, mito 2, golg 2,
cyto_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223010)
HIX0223010
HIT000503010
(
BC144606
)
(Conserved hypothetical protein.)
genome : 56,710,044 - 56,711,676 (1,633)
query : 1 - 228 (228/228)
3 exons
identity = 0.982
5'(1.000;0.862;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223010)
HIX0223010
HIT000503522
(
BC171791
)
(Metallothionein-1A; MT-1A; MTC; Metallothionein-IA; MT-IA;)
genome : 56,710,044 - 56,711,676 (1,633)
query : 1 - 199 (199/199)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR017854 : Metallothionein domain
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223010)
HIX0223010
HIT000503018
(
BC144614
)
(Conserved hypothetical protein.)
genome : 56,710,044 - 56,711,675 (1,632)
query : 1 - 242 (242/242)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223010)
HIX0021646
HIT000477894 (
ENST00000394485
)
(Metallothionein-1X; MT-1X; Metallothionein-IX; MT-IX;)
genome : 56,716,336 - 56,718,108 (1,773)
query : 1 - 450 (450/450)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021646)
HIX0021646
HIT000430239
(
AK311373
)
(Metallothionein-1X.)
genome : 56,716,382 - 56,722,286 (5,905)
query : 1 - 951 (951/951)
4 exons
identity = 0.998
5'(1.000;1.000;0.996;0.998)3'
coverage = 1.000
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR003019 : Metallothionein superfamily, eukaryotic
IPR017854 : Metallothionein domain
IPR018064 : Metallothionein, vertebrate, metal binding site
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021646)
HIX0021646
HIT000680569 (
ENST00000567563
)
(Metallothionein-1X.)
genome : 56,716,382 - 56,721,719 (5,338)
query : 1 - 551 (551/551)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021646)
HIX0021646
HIT000202597 (
NM_005952
)
(Metallothionein-1X; MT-1X; Metallothionein-IX; MT-IX;)
genome : 56,716,382 - 56,718,108 (1,727)
query : 1 - 404 (404/468)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021646)
HIX0021646
HIT000681351 (
ENST00000568370
)
(Conserved hypothetical protein.)
genome : 56,716,382 - 56,718,108 (1,727)
query : 1 - 1,727 (1,727/1,727)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 7, cyto 4, mito_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021646)
HIX0021646
HIT000676112 (
ENST00000562939
)
(Metallothionein-1X.)
genome : 56,716,382 - 56,717,515 (1,134)
query : 1 - 538 (538/538)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021646)
HIX0134433
HIT000430150
(
AK311284
)
Representative transcript
(Conserved hypothetical protein.)
genome : 56,716,382 - 56,717,393 (1,012)
query : 1 - 1,012 (1,012/1,012)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, extr 12, cyto 3, cyto_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0134433)
HIX0021646
HIT000051051
(
BC032131
)
(Metallothionein-1X.)
genome : 56,716,393 - 56,718,108 (1,716)
query : 1 - 543 (543/574)
3 exons
identity = 0.987
5'(1.000;0.995;0.975)3'
coverage = 1.000
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR003019 : Metallothionein superfamily, eukaryotic
IPR017854 : Metallothionein domain
IPR018064 : Metallothionein, vertebrate, metal binding site
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021646)
HIX0021646
HIT000678072 (
ENST00000564974
)
(Metallothionein-1X.)
genome : 56,716,393 - 56,718,108 (1,716)
query : 1 - 549 (549/549)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021646)
HIX0021646
HIT000041497
(
BC032338
)
Representative transcript
(Metallothionein-1X; MT-1X; Metallothionein-IX; MT-IX;)
genome : 56,716,395 - 56,718,108 (1,714)
query : 1 - 390 (390/454)
3 exons
identity = 0.997
5'(1.000;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR003019 : Metallothionein superfamily, eukaryotic
IPR017854 : Metallothionein domain
IPR018064 : Metallothionein, vertebrate, metal binding site
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021646)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : AJ489256
Danio
sp. (Zebrafish) : BC049475
Tetraodon
sp. (Tetraodon) : CR649879
Canis
sp. (Dog) : ENSCAFT00000014488
Equus
sp. (Horse) : ENSECAT00000001640
Macaca
sp. (Macaque) : XM_001098470
Pan
sp. (Chimpanzee) : XM_001138175
HIX0021646
HIT000038308
(
BC018190
)
(Metallothionein-1X; MT-1X; Metallothionein-IX; MT-IX;)
genome : 56,716,397 - 56,718,108 (1,712)
query : 1 - 388 (388/404)
3 exons
identity = 0.995
5'(1.000;0.985;0.996)3'
coverage = 1.000
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR003019 : Metallothionein superfamily, eukaryotic
IPR017854 : Metallothionein domain
IPR018064 : Metallothionein, vertebrate, metal binding site
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 3.5, cyto_nucl 3, nucl 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021646)
HIX0021646
HIT000259358
(
BC053882
)
(Conserved hypothetical protein.)
genome : 56,716,398 - 56,718,108 (1,711)
query : 1 - 1,711 (1,711/1,762)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 7, cyto 4, mito_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021646)
HIX0021646
HIT000091942
(
BC029916
)
(Conserved hypothetical protein.)
genome : 56,716,400 - 56,718,108 (1,709)
query : 1 - 1,709 (1,709/1,757)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 7, cyto 4, mito_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021646)
HIX0021646
HIT000323597
(
X76717
)
(Metallothionein-1X; MT-1X; Metallothionein-IX; MT-IX;)
genome : 56,716,401 - 56,718,108 (1,708)
query : 1 - 384 (384/415)
3 exons
identity = 0.995
5'(1.000;1.000;0.992)3'
coverage = 1.000
InterPro :
IPR000006 : Metallothionein, vertebrate
IPR003019 : Metallothionein superfamily, eukaryotic
IPR017854 : Metallothionein domain
IPR018064 : Metallothionein, vertebrate, metal binding site
IPR023587 : Metallothionein domain, vertebrate
GO :
0046872 : Molecular Function : metal ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021646)
HIX0021646
HIT000216268
(
S68956
)
(Non-protein coding transcript.)
genome : 56,716,453 - 56,717,141 (689)
query : 1 - 93 (93/93)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021646)
HIX0021646
HIT000676860 (
ENST00000563717
)
(Developmental pluripotency-associated protein 2.)
genome : 56,720,763 - 56,721,964 (1,202)
query : 1 - 878 (878/878)
2 exons
identity = 0.998
5'(1.000;0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021646)
HIX0038827
HIT000674880 (
ENST00000561663
)
(Hypothetical short protein.)
genome : 56,742,684 - 56,763,880 (21,197)
query : 1 - 1,018 (1,018/1,018)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038827)
HIX0038827
HIT000677676 (
ENST00000564560
)
(Hypothetical short protein.)
genome : 56,743,823 - 56,763,880 (20,058)
query : 1 - 730 (730/748)
2 exons
identity = 0.999
3'(0.996;1.000)5'
coverage = 0.976
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, mito 7, extr 2, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038827)
HIX0038827
HIT000094918
(
BC037791
)
Representative transcript
(Hypothetical short protein.)
genome : 56,762,214 - 56,763,905 (1,692)
query : 1 - 1,690 (1,690/1,705)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, nucl 3.5, cyto_nucl 3.5, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038827)
HIX0202270
HIT000204985 (
NM_014669
)
(Nuclear pore complex protein Nup93; 93 kDa nucleoporin; Nucleoporin Nup93;)
genome : 56,764,017 - 56,878,862 (114,846)
query : 1 - 2,922 (2,922/2,922)
22 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 12.5, nucl 11.5, extr 2, mito 2,
golg 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202270)
HIX0202270
HIT000117881 (
ENST00000308159
)
(Nuclear pore complex protein Nup93; 93 kDa nucleoporin; Nucleoporin Nup93;)
genome : 56,764,017 - 56,878,681 (114,665)
query : 1 - 2,741 (2,741/2,741)
22 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 12.5, nucl 11.5, extr 2, mito 2,
golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202270)
HIX0202270
HIT000676997 (
ENST00000563858
)
(Nuclear pore complex protein Nup93 isoform 2.)
genome : 56,764,030 - 56,866,265 (102,236)
query : 1 - 797 (797/797)
7 exons
identity = 0.989
5'(1.000;1.000;0.942;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, extr 10, cyto_nucl 10, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202270)
HIX0202270
HIT000679354 (
ENST00000566315
)
(Nuclear pore complex protein Nup93 isoform 1.)
genome : 56,764,041 - 56,839,509 (75,469)
query : 1 - 589 (589/589)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 15.5, nucl 10.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202270)
HIX0202270
HIT000682768 (
ENST00000569842
)
(Nuclear pore complex protein Nup93; 93 kDa nucleoporin; Nucleoporin Nup93;)
genome : 56,764,042 - 56,878,681 (114,640)
query : 1 - 2,834 (2,834/2,834)
23 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 13, cyto 11, extr 2, mito 2,
golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202270)
HIX0202270
HIT000682789 (
ENST00000569863
)
(Nuclear pore complex protein Nup93 isoform 2.)
genome : 56,764,061 - 56,857,710 (93,650)
query : 1 - 630 (630/630)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 14.5, cyto 9.5, cysk 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202270)
HIX0202270
HIT000042249
(
D42085
)
Representative transcript
(Nuclear pore complex protein Nup93; 93 kDa nucleoporin; Nucleoporin Nup93;)
genome : 56,764,072 - 56,878,676 (114,605)
query : 1 - 2,681 (2,681/2,681)
22 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.989;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.988;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR007231 : Nucleoporin interacting component Nup93/Nic96
GO :
0005643 : Cellular Component : nuclear pore
0006810 : Biological Process : transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 12.5, nucl 11.5, extr 2, mito 2,
golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202270)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB168371
Gallus
sp. (Chicken) : AJ851764
Mus
sp. (Mouse) : AK028864
Danio
sp. (Zebrafish) : BC044466
Rattus
sp. (Rat) : BC081925
Bos
sp. (Cow) : BC142296
Pongo
sp. (Orangutan) : CR859615
Monodelphis
sp. (Opossum) : ENSMODT00000017077
Oryzias
sp. (Medaka) : ENSORLT00000019528
Tetraodon
sp. (Tetraodon) : GSTENT00016787001
Takifugu
sp. (Fugu) : SINFRUT00000145647
Equus
sp. (Horse) : XM_001493320
Pan
sp. (Chimpanzee) : XM_510982
Canis
sp. (Dog) : XM_535293
HIX0202270
HIT000067161
(
AF086282
)
(Nuclear pore complex protein Nup93 isoform 1.)
genome : 56,764,079 - 56,852,648 (88,570)
query : 1 - 621 (621/621)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR007231 : Nucleoporin interacting component Nup93/Nic96
GO :
0005643 : Cellular Component : nuclear pore
0006810 : Biological Process : transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 15, cyto 12, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202270)
HIX0202270
HIT000675692 (
ENST00000562496
)
(Nuclear pore complex protein Nup93 isoform 1.)
genome : 56,774,626 - 56,839,464 (64,839)
query : 1 - 583 (583/583)
5 exons
identity = 0.995
5'(0.994;0.990;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, cyto 13.5, nucl 10.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202270)
HIX0202270
HIT000681629 (
ENST00000568656
)
(Nuclear pore complex protein Nup93 isoform 1.)
genome : 56,781,823 - 56,852,621 (70,799)
query : 1 - 592 (592/592)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 16, cyto 11, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202270)
HIX0202270
HIT000042100
(
BC034346
)
(Nuclear pore complex protein Nup93; 93 kDa nucleoporin; Nucleoporin Nup93;)
genome : 56,782,144 - 56,878,677 (96,534)
query : 16 - 2,647 (2,632/2,674)
21 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.995;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.994
InterPro :
IPR007231 : Nucleoporin interacting component Nup93/Nic96
GO :
0005643 : Cellular Component : nuclear pore
0006810 : Biological Process : transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 12.5, cyto 11.5, extr 3, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202270)
HIX0202270
HIT000425059
(
AK292262
)
(Nuclear pore complex protein Nup93; 93 kDa nucleoporin; Nucleoporin Nup93;)
genome : 56,782,144 - 56,878,676 (96,533)
query : 14 - 2,644 (2,631/2,644)
21 exons
identity = 0.998
5'(1.000;0.992;1.000;1.000;1.000;0.978;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.986;
1.000;1.000;1.000;1.000;0.988;1.000;0.996)3'
coverage = 0.995
InterPro :
IPR007231 : Nucleoporin interacting component Nup93/Nic96
GO :
0005643 : Cellular Component : nuclear pore
0006810 : Biological Process : transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 12.5, nucl 11.5, extr 2, mito 2,
golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202270)
HIX0202270
HIT000679709 (
ENST00000566678
)
(Nuclear pore complex protein Nup93; 93 kDa nucleoporin; CBP-interacting protein 4; Nucleoporin Nup93;)
genome : 56,782,261 - 56,839,598 (57,338)
query : 1 - 442 (442/442)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 12, cyto 10, mito 4, extr 3,
pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202270)
HIX0202270
HIT000677987 (
ENST00000564887
)
(Nuclear pore complex protein Nup93 isoform 2.)
genome : 56,815,570 - 56,878,676 (63,107)
query : 1 - 2,875 (2,875/2,875)
20 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 15.5, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202270)
HIX0202270
HIT000722673 (
NM_001242795
)
(Nuclear pore complex protein Nup93 isoform 2.)
genome : 56,815,704 - 56,878,862 (63,159)
query : 1 - 2,927 (2,927/2,927)
20 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 15.5, nucl 8.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202270)
HIX0202270
HIT000013251
(
AK056637
)
(Nuclear pore complex protein Nup93 isoform 2.)
genome : 56,815,741 - 56,878,676 (62,936)
query : 1 - 2,704 (2,704/2,704)
20 exons
identity = 1.000
5'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR007231 : Nucleoporin interacting component Nup93/Nic96
GO :
0005643 : Cellular Component : nuclear pore
0006810 : Biological Process : transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 15.5, nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202270)
HIX0202270
HIT000679757 (
ENST00000566727
)
(Nuclear pore complex protein Nup93 isoform 1.)
genome : 56,815,741 - 56,855,454 (39,714)
query : 1 - 563 (563/563)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, extr 7, cyto_nucl 3.16667, cyto_pero 2.83333,
nucl 2.5, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202270)
HIX0202270
HIT000682533 (
ENST00000569595
)
(Nuclear pore complex protein Nup93 isoform 1.)
genome : 56,815,741 - 56,839,527 (23,787)
query : 1 - 590 (590/590)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202270)
HIX0202270
HIT000680645 (
ENST00000567641
)
(Nuclear pore complex protein Nup93 isoform 2.)
genome : 56,816,158 - 56,862,933 (46,776)
query : 1 - 604 (604/604)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 16, cyto 10, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202270)
HIX0202270
HIT000681267 (
ENST00000568283
)
(Nuclear pore complex protein Nup93 isoform 2.)
genome : 56,816,162 - 56,839,544 (23,383)
query : 1 - 584 (584/584)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, nucl 12, cyto 11, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202270)
HIX0202270
HIT000680101 (
ENST00000567081
)
(Nuclear pore complex protein Nup93 isoform 1.)
genome : 56,817,292 - 56,839,474 (22,183)
query : 1 - 315 (315/315)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 10, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202270)
HIX0202270
HIT000488800
(
AK294176
)
(Nuclear pore complex protein Nup93 isoform 2.)
genome : 56,817,368 - 56,878,797 (61,430)
query : 1 - 2,856 (2,856/2,856)
20 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR007231 : Nucleoporin interacting component Nup93/Nic96
GO :
0005643 : Cellular Component : nuclear pore
0006810 : Biological Process : transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 15.5, nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202270)
HIX0202270
HIT000641571 (
ENST00000542526
)
(Nuclear pore complex protein Nup93 isoform 2.)
genome : 56,817,368 - 56,878,797 (61,430)
query : 1 - 2,856 (2,856/2,856)
20 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 15.5, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202270)
HIX0202270
HIT000722674 (
NM_001242796
)
(Nuclear pore complex protein Nup93 isoform 2.)
genome : 56,817,413 - 56,878,862 (61,450)
query : 1 - 2,876 (2,876/2,876)
20 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 15.5, nucl 8.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202270)
HIX0202270
HIT000676595 (
ENST00000563437
)
(Nuclear pore complex protein Nup93; 93 kDa nucleoporin; Dead eye protein; Nucleoporin Nup93;)
genome : 56,865,427 - 56,867,301 (1,875)
query : 1 - 762 (762/762)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, cyto 6, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202270)
HIX0202270
HIT000676563 (
ENST00000563405
)
(Nuclear pore complex protein Nup93; 93 kDa nucleoporin; Nucleoporin Nup93;)
genome : 56,870,537 - 56,873,128 (2,592)
query : 1 - 477 (477/477)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 17.5, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202270)
HIX0202270
HIT000676638 (
ENST00000563486
)
(Nuclear pore complex protein Nup93 isoform 2.)
genome : 56,871,537 - 56,873,847 (2,311)
query : 1 - 635 (635/635)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 11, cyto 9.5, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202270)
HIX0202270
HIT000682266 (
ENST00000569322
)
(Nuclear pore complex protein Nup93 isoform 2.)
genome : 56,872,922 - 56,878,676 (5,755)
query : 1 - 410 (410/410)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 14, nucl 6.5, extr 6, cyto_nucl 5.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202270)
HIX0202270
HIT000677406 (
ENST00000564278
)
(Nuclear pore complex protein Nup93 isoform 2.)
genome : 56,873,312 - 56,878,664 (5,353)
query : 1 - 588 (588/588)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, cyto_nucl 10, mito 8, cyto_pero 7.83333,
extr 6, E.R._mito 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202270)
HIX0202270
HIT000676619 (
ENST00000563465
)
(Nuclear pore complex protein Nup93 isoform 2.)
genome : 56,875,553 - 56,878,675 (3,123)
query : 1 - 458 (458/458)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25.5, mito_pero 15, pero 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202270)
HIX0202270
HIT000043467
(
AK123594
)
(Conserved hypothetical protein.)
genome : 56,876,095 - 56,878,676 (2,582)
query : 1 - 2,582 (2,582/2,582)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 6, cyto_nucl 5.33333, cyto_pero 3.83333,
nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202270)
HIX0202270
HIT000675595 (
ENST00000562394
)
(Activating molecule in BECN1-regulated autophagy protein 1 isoform 1.)
genome : 56,876,095 - 56,878,676 (2,582)
query : 1 - 2,582 (2,582/2,582)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 6, cyto_nucl 5.33333, cyto_pero 3.83333,
nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202270)
HIX0202270
HIT000045038
(
AK125165
)
(Conserved hypothetical protein.)
genome : 56,878,629 - 56,880,792 (2,164)
query : 1 - 2,167 (2,167/2,167)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 15, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202270)
HIX0223453
HIT000675839 (
ENST00000562655
)
(Conserved hypothetical protein.)
genome : 56,878,629 - 56,880,792 (2,164)
query : 1 - 2,164 (2,164/2,164)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223453)
HIX0134284
HIT000470871 (
ENST00000384916
)
(Non-protein coding transcript.)
genome : 56,892,430 - 56,892,513 (84)
query : 1 - 84 (84/84)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0134284)
HIX0134284
HIT000658058 (
NR_029680
)
(Non-protein coding transcript.)
genome : 56,892,430 - 56,892,513 (84)
query : 1 - 84 (84/84)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0134284)
HIX0038651
HIT000197384 (
NM_000339
)
(Solute carrier family 12 member 3; Na-Cl cotransporter; NCC; Na-Cl symporter; Thiazide-sensitive sodium-chloride cotransporter;)
genome : 56,899,119 - 56,949,761 (50,643)
query : 1 - 5,566 (5,566/5,582)
26 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;0.991;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038651)
HIX0038651
HIT000486141 (
NM_001126107
)
(Solute carrier family 12 member 3; Na-Cl cotransporter; NCC; Na-Cl symporter; Thiazide-sensitive sodium-chloride cotransporter;)
genome : 56,899,119 - 56,949,761 (50,643)
query : 1 - 5,563 (5,563/5,579)
26 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;0.991;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038651)
HIX0038651
HIT000486142 (
NM_001126108
)
(Solute carrier family 12 member 3; Na-Cl cotransporter; NCC; Na-Cl symporter; Thiazide-sensitive sodium-chloride cotransporter;)
genome : 56,899,119 - 56,949,761 (50,643)
query : 1 - 5,539 (5,539/5,555)
26 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;0.991;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038651)
HIX0038651
HIT000536860 (
ENST00000438926
)
(Solute carrier family 12 member 3; Na-Cl cotransporter; NCC; Na-Cl symporter; Thiazide-sensitive sodium-chloride cotransporter;)
genome : 56,899,119 - 56,949,762 (50,644)
query : 1 - 5,567 (5,567/5,567)
26 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038651)
HIX0038651
HIT000434164
(
AK315298
)
(Solute carrier family 12 member 3; Na-Cl cotransporter; NCC; Na-Cl symporter; Thiazide-sensitive sodium-chloride cotransporter;)
genome : 56,899,119 - 56,947,317 (48,199)
query : 1 - 3,119 (3,119/3,119)
26 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.991;1.000;
1.000;1.000;1.000;1.000;1.000;0.990;1.000;
1.000;1.000;1.000;1.000;0.988;1.000;1.000;
1.000;1.000;1.000;1.000;0.993)3'
coverage = 1.000
InterPro :
IPR002948 : Thiazide-sensitive Na-K-Cl co-transporter
IPR004841 : Amino acid permease/ SLC12A domain
IPR004842 : Na/K/Cl co-transporter superfamily
IPR013612 : Amino acid permease, N-terminal
GO :
0005215 : Molecular Function : transporter activity
0006810 : Biological Process : transport
0006811 : Biological Process : ion transport
0015377 : Molecular Function : cation:chloride symporter activity
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038651)
HIX0038651
HIT000679814 (
ENST00000566786
)
(Solute carrier family 12 member 3; Na-Cl cotransporter; NCC; Na-Cl symporter; Thiazide-sensitive sodium-chloride cotransporter;)
genome : 56,899,119 - 56,947,317 (48,199)
query : 1 - 3,119 (3,119/3,119)
26 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038651)
HIX0038651
HIT000330913
(
AK223133
)
(Solute carrier family 12 member 3 isoform 3.)
genome : 56,899,120 - 56,947,613 (48,494)
query : 1 - 1,847 (1,847/1,903)
13 exons
identity = 0.995
5'(1.000;1.000;1.000;1.000;1.000;0.991;1.000;
1.000;1.000;0.994;0.991;1.000;0.976)3'
coverage = 1.000
InterPro :
IPR002948 : Thiazide-sensitive Na-K-Cl co-transporter
IPR004841 : Amino acid permease/ SLC12A domain
IPR013612 : Amino acid permease, N-terminal
GO :
0005215 : Molecular Function : transporter activity
0006810 : Biological Process : transport
0006811 : Biological Process : ion transport
0016020 : Cellular Component : membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038651)
HIX0038651
HIT000108437 (
ENST00000262502
)
(Solute carrier family 12 member 3; Na-Cl cotransporter; NCC; Na-Cl symporter; Thiazide-sensitive sodium-chloride cotransporter;)
genome : 56,899,123 - 56,948,437 (49,315)
query : 1 - 4,208 (4,208/4,208)
26 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038651)
HIX0038651
HIT000324450
(
X91220
)
Representative transcript
(Solute carrier family 12 member 3; Na-Cl cotransporter; NCC; Na-Cl symporter; Thiazide-sensitive sodium-chloride cotransporter;)
genome : 56,899,123 - 56,948,434 (49,312)
query : 1 - 4,208 (4,208/4,211)
26 exons
identity = 0.997
5'(0.997;1.000;1.000;1.000;1.000;0.991;1.000;
1.000;1.000;1.000;0.982;1.000;1.000;1.000;
0.990;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.995)3'
coverage = 0.999
InterPro :
IPR002948 : Thiazide-sensitive Na-K-Cl co-transporter
IPR004841 : Amino acid permease/ SLC12A domain
IPR004842 : Na/K/Cl co-transporter superfamily
IPR013612 : Amino acid permease, N-terminal
GO :
0005215 : Molecular Function : transporter activity
0006810 : Biological Process : transport
0006811 : Biological Process : ion transport
0015377 : Molecular Function : cation:chloride symporter activity
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038651)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : AJ131765
Mus
sp. (Mouse) : BC038612
Danio
sp. (Zebrafish) : BC155803
Pongo
sp. (Orangutan) : CR858642
Danio
sp. (Zebrafish) : ENSDART00000077786
Equus
sp. (Horse) : ENSECAT00000016156
Tetraodon
sp. (Tetraodon) : GSTENT00004595001
Takifugu
sp. (Fugu) : SINFRUT00000135184
Rattus
sp. (Rat) : U10097
Macaca
sp. (Macaque) : XM_001093708
Gallus
sp. (Chicken) : XM_414059
Pan
sp. (Chimpanzee) : XM_510983
Canis
sp. (Dog) : XM_535292
Danio
sp. (Zebrafish) : XM_686141
Monodelphis
sp. (Opossum) : XR_030233
HIX0038651
HIT000676398 (
ENST00000563236
)
(Solute carrier family 12 member 3; Na-Cl cotransporter; NCC; Na-Cl symporter; Thiazide-sensitive sodium-chloride cotransporter;)
genome : 56,899,123 - 56,948,434 (49,312)
query : 1 - 4,208 (4,208/4,208)
26 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038651)
HIX0038651
HIT000219915
(
U44128
)
(Solute carrier family 12 member 3; Na-Cl cotransporter; NCC; Na-Cl symporter; Thiazide-sensitive sodium-chloride cotransporter;)
genome : 56,899,142 - 56,947,349 (48,208)
query : 1 - 3,131 (3,131/3,131)
26 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.991;0.991;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.988;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR002948 : Thiazide-sensitive Na-K-Cl co-transporter
IPR004841 : Amino acid permease/ SLC12A domain
IPR004842 : Na/K/Cl co-transporter superfamily
IPR013612 : Amino acid permease, N-terminal
GO :
0005215 : Molecular Function : transporter activity
0006810 : Biological Process : transport
0006811 : Biological Process : ion transport
0015377 : Molecular Function : cation:chloride symporter activity
0016020 : Cellular Component : membrane
0016021 : Cellular Component : integral component of membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038651)
HIX0038651
HIT000681956 (
ENST00000569002
)
(Solute carrier family 12 member 3; Na-Cl cotransporter; NCC; Na-Cl symporter; Thiazide-sensitive sodium-chloride cotransporter;)
genome : 56,936,134 - 56,938,764 (2,631)
query : 1 - 745 (745/745)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto 10, cyto_nucl 10, nucl 4, pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038651)
HIX0212169
HIT000583938 (
ENST00000479895
)
(Ribosomal protein S24e family protein.)
genome : 56,940,446 - 56,940,868 (423)
query : 1 - 423 (423/423)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 13, cyto_plas 12.5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0212169)
HIX0038651
HIT000676510 (
ENST00000563352
)
(Solute carrier family 12 member 3; Na-Cl cotransporter; NCC; Na-Cl symporter; Thiazide-sensitive sodium-chloride cotransporter;)
genome : 56,940,938 - 56,947,890 (6,953)
query : 1 - 787 (787/787)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10.5, nucl 10, extr 9, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038651)
HIX0013062
HIT000537911 (
ENST00000439977
)
(Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein; Methyl methanesulfonate (MMF)-inducible fragment protein 1;)
genome : 56,965,960 - 56,977,793 (11,834)
query : 1 - 1,964 (1,964/1,964)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 22, mito 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013062)
HIX0013062
HIT000205000 (
NM_014685
)
(Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein; Methyl methanesulfonate (MMF)-inducible fragment protein 1;)
genome : 56,966,002 - 56,977,793 (11,792)
query : 1 - 1,922 (1,922/1,944)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 15.5, cyto 9.5, extr 2, pero 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013062)
HIX0013062
HIT000316792 (
NM_001010989
)
(Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein; Methyl methanesulfonate (MMF)-inducible fragment protein 1;)
genome : 56,966,002 - 56,977,793 (11,792)
query : 1 - 1,919 (1,919/1,941)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 15.5, cyto 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013062)
HIX0013062
HIT000725230 (
NM_001272103
)
(Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein; Methyl methanesulfonate (MMF)-inducible fragment protein 1;)
genome : 56,966,002 - 56,977,793 (11,792)
query : 1 - 1,765 (1,765/1,787)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 14, cyto 14
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013062)
HIX0013062
HIT000496791
(
AK302167
)
(Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein isoform 2.)
genome : 56,966,026 - 56,977,281 (11,256)
query : 1 - 1,314 (1,314/1,314)
7 exons
identity = 0.994
5'(0.996;0.926;1.000;0.992;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR029071 : Ubiquitin-related domain
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 27, cyto_nucl 15.5, cyto 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013062)
HIX0013062
HIT000676088 (
ENST00000562914
)
(Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein; Methyl methanesulfonate (MMF)-inducible fragment protein 1;)
genome : 56,966,054 - 56,969,466 (3,413)
query : 1 - 570 (570/570)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 13, extr 9, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013062)
HIX0013062
HIT000034541
(
BC009739
)
(Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein; Methyl methanesulfonate (MMF)-inducible fragment protein 1;)
genome : 56,966,059 - 56,977,793 (11,735)
query : 1 - 1,388 (1,388/1,502)
6 exons
identity = 0.999
5'(0.996;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR000626 : Ubiquitin-like
IPR029071 : Ubiquitin-related domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 16, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013062)
HIX0013062
HIT000331013
(
AK223233
)
(Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein; Methyl methanesulfonate (MMF)-inducible fragment protein 1;)
genome : 56,966,059 - 56,977,793 (11,735)
query : 1 - 1,865 (1,865/1,887)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.991;
1.000)3'
coverage = 0.999
InterPro :
IPR000626 : Ubiquitin-like
IPR029071 : Ubiquitin-related domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 15.5, cyto 9.5, extr 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013062)
HIX0013062
HIT000059115
(
AB034989
)
Representative transcript
(Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein; Methyl methanesulfonate (MMF)-inducible fragment protein 1;)
genome : 56,966,059 - 56,977,793 (11,735)
query : 1 - 1,865 (1,865/1,865)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR000626 : Ubiquitin-like
IPR029071 : Ubiquitin-related domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 15.5, cyto 9.5, extr 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013062)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK159500
Rattus
sp. (Rat) : BC061849
Danio
sp. (Zebrafish) : BC097190
Bos
sp. (Cow) : BC149669
Gallus
sp. (Chicken) : CR353874
Pongo
sp. (Orangutan) : CR858911
Monodelphis
sp. (Opossum) : ENSMODT00000017155
Oryzias
sp. (Medaka) : ENSORLT00000000476
Tetraodon
sp. (Tetraodon) : GSTENT00009334001
Takifugu
sp. (Fugu) : SINFRUT00000140824
Macaca
sp. (Macaque) : XM_001095112
Pan
sp. (Chimpanzee) : XM_001141635
Canis
sp. (Dog) : XM_845948
Equus
sp. (Horse) : XR_036041
HIX0013062
HIT000115601 (
ENST00000300302
)
(Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein; Methyl methanesulfonate (MMF)-inducible fragment protein 1;)
genome : 56,966,059 - 56,977,793 (11,735)
query : 1 - 1,862 (1,862/1,862)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 15.5, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013062)
HIX0013062
HIT000136744 (
ENST00000344114
)
(Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein; Methyl methanesulfonate (MMF)-inducible fragment protein 1;)
genome : 56,966,059 - 56,977,793 (11,735)
query : 1 - 1,388 (1,388/1,388)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 16, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013062)
HIX0013062
HIT000424885
(
AK292088
)
(Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein; Methyl methanesulfonate (MMF)-inducible fragment protein 1;)
genome : 56,966,059 - 56,977,467 (11,409)
query : 1 - 1,539 (1,539/1,539)
8 exons
identity = 0.999
5'(0.992;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR000626 : Ubiquitin-like
IPR029071 : Ubiquitin-related domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 15.5, cyto 9.5, extr 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013062)
HIX0013062
HIT000424362
(
AK291565
)
(Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein; Methyl methanesulfonate (MMF)-inducible fragment protein 1;)
genome : 56,966,059 - 56,977,351 (11,293)
query : 1 - 1,423 (1,423/1,423)
8 exons
identity = 0.999
5'(1.000;1.000;0.987;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR000626 : Ubiquitin-like
IPR029071 : Ubiquitin-related domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 15.5, cyto 9.5, extr 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013062)
HIX0013062
HIT000679020 (
ENST00000565966
)
(Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein; Methyl methanesulfonate (MMF)-inducible fragment protein 1;)
genome : 56,966,059 - 56,973,959 (7,901)
query : 1 - 798 (798/798)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 14, cyto 8, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013062)
HIX0013062
HIT000499424
(
AK304800
)
(Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein; Methyl methanesulfonate (MMF)-inducible fragment protein 1;)
genome : 56,966,059 - 56,971,325 (5,267)
query : 1 - 1,125 (1,125/1,125)
4 exons
identity = 0.999
5'(0.996;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000626 : Ubiquitin-like
IPR029071 : Ubiquitin-related domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, nucl 12, cyto 11, extr 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013062)
HIX0013062
HIT000682507 (
ENST00000569569
)
(Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein; Methyl methanesulfonate (MMF)-inducible fragment protein 1;)
genome : 56,966,059 - 56,971,325 (5,267)
query : 1 - 1,125 (1,125/1,125)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, nucl 12, cyto 11, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013062)
HIX0013062
HIT000681649 (
ENST00000568676
)
(Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein; Methyl methanesulfonate (MMF)-inducible fragment protein 1;)
genome : 56,966,059 - 56,969,560 (3,502)
query : 1 - 571 (571/571)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 14, nucl 7.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013062)
HIX0013062
HIT000041664
(
BC032673
)
(Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein; Methyl methanesulfonate (MMF)-inducible fragment protein 1;)
genome : 56,966,072 - 56,977,793 (11,722)
query : 13 - 1,863 (1,851/1,878)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.999)3'
coverage = 0.993
InterPro :
IPR000626 : Ubiquitin-like
IPR029071 : Ubiquitin-related domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 15.5, cyto 9.5, extr 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013062)
HIX0013062
HIT000393397
(
DQ837586
)
(Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein; Methyl methanesulfonate (MMF)-inducible fragment protein 1;)
genome : 56,966,060 - 56,977,511 (11,452)
query : 1 - 1,425 (1,425/1,425)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR000626 : Ubiquitin-like
IPR029071 : Ubiquitin-related domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 14, cyto 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013062)
HIX0013062
HIT000683182 (
ENST00000570273
)
(Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein; Methyl methanesulfonate (MMF)-inducible fragment protein 1;)
genome : 56,966,060 - 56,977,511 (11,452)
query : 1 - 1,425 (1,425/1,425)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 14, cyto 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013062)
HIX0013062
HIT000064612
(
AF055001
)
(Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein; Methyl methanesulfonate (MMF)-inducible fragment protein 1;)
genome : 56,966,062 - 56,977,793 (11,732)
query : 1 - 1,862 (1,862/1,884)
8 exons
identity = 0.999
5'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.999
InterPro :
IPR000626 : Ubiquitin-like
IPR029071 : Ubiquitin-related domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 15.5, cyto 9.5, extr 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013062)
HIX0013062
HIT000042165
(
D14695
)
(Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein; Methyl methanesulfonate (MMF)-inducible fragment protein 1;)
genome : 56,966,064 - 56,977,793 (11,730)
query : 1 - 1,860 (1,860/1,860)
8 exons
identity = 0.998
5'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
0.997)3'
coverage = 1.000
InterPro :
IPR000626 : Ubiquitin-like
IPR029071 : Ubiquitin-related domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 15.5, cyto 9.5, extr 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013062)
HIX0013062
HIT000029334
(
BC000086
)
(Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein; Methyl methanesulfonate (MMF)-inducible fragment protein 1;)
genome : 56,966,067 - 56,977,788 (11,722)
query : 1 - 1,852 (1,852/1,871)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR000626 : Ubiquitin-like
IPR029071 : Ubiquitin-related domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 15.5, cyto 9.5, extr 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013062)
HIX0013062
HIT000033721
(
BC008320
)
(Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein; Methyl methanesulfonate (MMF)-inducible fragment protein 1;)
genome : 56,966,068 - 56,977,784 (11,717)
query : 1 - 1,847 (1,847/1,864)
8 exons
identity = 0.999
5'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR000626 : Ubiquitin-like
IPR029071 : Ubiquitin-related domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 15.5, cyto 9.5, extr 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013062)
HIX0013062
HIT000361071 (
ENST00000379792
)
(Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein; Methyl methanesulfonate (MMF)-inducible fragment protein 1;)
genome : 56,966,072 - 56,977,798 (11,727)
query : 1 - 1,782 (1,782/1,782)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 15.5, cyto 10.5, extr 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013062)
HIX0013062
HIT000267966
(
CR457116
)
(Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein; Methyl methanesulfonate (MMF)-inducible fragment protein 1;)
genome : 56,966,157 - 56,977,198 (11,042)
query : 1 - 1,172 (1,172/1,176)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.997
InterPro :
IPR000626 : Ubiquitin-like
IPR029071 : Ubiquitin-related domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 15.5, cyto 9.5, extr 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013062)
HIX0013062
HIT000064614
(
AF055003
)
(Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein isoform 2.)
genome : 56,966,259 - 56,977,793 (11,535)
query : 1 - 1,662 (1,662/1,684)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.999
InterPro :
IPR000626 : Ubiquitin-like
IPR029071 : Ubiquitin-related domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 21, cyto 7, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013062)
HIX0013062
HIT000682372 (
ENST00000569429
)
(Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein; Methyl methanesulfonate (MMF)-inducible fragment protein 1;)
genome : 56,967,096 - 56,973,904 (6,809)
query : 1 - 562 (562/562)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, nucl 12.5, cyto 11.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013062)
HIX0013062
HIT000676501 (
ENST00000563343
)
(Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein; Methyl methanesulfonate (MMF)-inducible fragment protein 1;)
genome : 56,967,120 - 56,973,858 (6,739)
query : 1 - 567 (567/567)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 14.5, cyto 8, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013062)
HIX0013062
HIT000679585 (
ENST00000566550
)
(Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein; Methyl methanesulfonate (MMF)-inducible fragment protein 1;)
genome : 56,968,877 - 56,969,475 (599)
query : 1 - 511 (511/511)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_mito 11, mito 10, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013062)
HIX0013062
HIT000676923 (
ENST00000563781
)
(Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein; Methyl methanesulfonate (MMF)-inducible fragment protein 1;)
genome : 56,969,290 - 56,976,114 (6,825)
query : 1 - 774 (774/774)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 14.5, nucl 13.5, cyto 10.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013062)
HIX0013062
HIT000681339 (
ENST00000568358
)
(Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein; Methyl methanesulfonate (MMF)-inducible fragment protein 1;)
genome : 56,969,314 - 56,977,460 (8,147)
query : 1 - 751 (751/751)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, nucl 13, cyto 10, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013062)
HIX0013062
HIT000074235
(
AF217990
)
(Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein; Methyl methanesulfonate (MMF)-inducible fragment protein 1;)
genome : 56,969,863 - 56,977,789 (7,927)
query : 1 - 2,199 (2,199/2,217)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 16, cyto 15.5, nucl 11.5, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013062)
HIX0013062
HIT000677789 (
ENST00000564678
)
(Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein; Methyl methanesulfonate (MMF)-inducible fragment protein 1;)
genome : 56,969,863 - 56,977,789 (7,927)
query : 1 - 2,199 (2,199/2,199)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 16, cyto 15.5, nucl 11.5, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013062)
HIX0013062
HIT000677049 (
ENST00000563911
)
(Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein isoform 4.)
genome : 56,970,636 - 56,977,469 (6,834)
query : 1 - 844 (844/844)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 17, cyto_nucl 16.5, nucl 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013062)
HIX0013062
HIT000680937 (
ENST00000567944
)
(Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein; Methyl methanesulfonate (MMF)-inducible fragment protein 1;)
genome : 56,973,056 - 56,974,025 (970)
query : 1 - 435 (435/435)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 19, cyto 16, nucl 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013062)
HIX0013062
HIT000681624 (
ENST00000568651
)
(Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein isoform 4.)
genome : 56,973,161 - 56,977,209 (4,049)
query : 1 - 458 (458/458)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 23, nucl 8, cyto_nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013062)
HIX0038784
HIT000678919 (
ENST00000565861
)
(Conserved hypothetical protein.)
genome : 56,974,190 - 56,975,254 (1,065)
query : 1 - 601 (601/601)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto_nucl 5.83333, nucl 5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038784)
HIX0038784
HIT000088688
(
BC015447
)
Representative transcript
(Hypothetical short protein.)
genome : 56,974,940 - 56,975,637 (698)
query : 1 - 698 (698/712)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 7, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038784)
HIX0223877
HIT000683119 (
ENST00000570210
)
(Hypothetical protein.)
genome : 56,974,940 - 56,975,638 (699)
query : 1 - 699 (699/699)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 17, extr 10, nucl 1, cyto 1, cyto_nucl 1, pero 1,
lyso 1, golg 1, cyto_pero 1, cyto_golg 1
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223877)
HIX0013062
HIT000681778 (
ENST00000568814
)
(Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 1 protein; Methyl methanesulfonate (MMF)-inducible fragment protein 1;)
genome : 56,975,923 - 56,977,319 (1,397)
query : 1 - 509 (509/509)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, mito 11, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0013062)
HIX0202306
HIT000102713 (
ENST00000200676
)
(Cholesteryl ester transfer family protein.)
genome : 56,995,762 - 57,017,757 (21,996)
query : 1 - 1,791 (1,791/1,791)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202306)
HIX0202306
HIT000195357
(
M30185
)
Representative transcript
(Cholesteryl ester transfer protein; Lipid transfer protein I; Precursor;)
genome : 56,995,762 - 57,017,753 (21,992)
query : 1 - 1,787 (1,787/1,787)
16 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.986;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001124 : Lipid-binding serum glycoprotein, C-terminal
IPR017130 : Cholesteryl ester transfer
IPR017942 : Lipid-binding serum glycoprotein, N-terminal
IPR017943 : Bactericidal permeability-increasing protein, alpha/beta domain
IPR017954 : Lipid-binding serum glycoprotein, conserved site
GO :
0008289 : Molecular Function : lipid binding
0017127 : Molecular Function : cholesterol transporter activity
0034364 : Cellular Component : high-density lipoprotein particle
0043691 : Biological Process : reverse cholesterol transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, lyso 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202306)
HIX0202306
HIT000492323
(
AK297699
)
(Cholesteryl ester transfer protein; Lipid transfer protein I; Precursor;)
genome : 56,995,835 - 57,017,756 (21,922)
query : 5 - 1,541 (1,537/1,541)
15 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.986;1.000;
1.000)3'
coverage = 0.997
InterPro :
IPR001124 : Lipid-binding serum glycoprotein, C-terminal
IPR017130 : Cholesteryl ester transfer
IPR017942 : Lipid-binding serum glycoprotein, N-terminal
IPR017943 : Bactericidal permeability-increasing protein, alpha/beta domain
IPR017954 : Lipid-binding serum glycoprotein, conserved site
GO :
0008289 : Molecular Function : lipid binding
0017127 : Molecular Function : cholesterol transporter activity
0034364 : Cellular Component : high-density lipoprotein particle
0043691 : Biological Process : reverse cholesterol transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, lyso 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202306)
HIX0202306
HIT000197129 (
NM_000078
)
(Cholesteryl ester transfer family protein.)
genome : 56,995,835 - 57,017,756 (21,922)
query : 1 - 1,717 (1,717/1,717)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, lyso 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202306)
HIX0202306
HIT000361059 (
ENST00000379780
)
(Cholesteryl ester transfer family protein.)
genome : 56,995,835 - 57,017,756 (21,922)
query : 1 - 1,537 (1,537/1,537)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, lyso 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202306)
HIX0202306
HIT000424383
(
AK291586
)
(Cholesteryl ester transfer protein; Lipid transfer protein I; Precursor;)
genome : 56,995,875 - 57,017,756 (21,882)
query : 1 - 1,677 (1,677/1,677)
16 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.989;1.000;1.000;1.000;1.000;1.000;0.986;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001124 : Lipid-binding serum glycoprotein, C-terminal
IPR017130 : Cholesteryl ester transfer
IPR017942 : Lipid-binding serum glycoprotein, N-terminal
IPR017943 : Bactericidal permeability-increasing protein, alpha/beta domain
IPR017954 : Lipid-binding serum glycoprotein, conserved site
GO :
0008289 : Molecular Function : lipid binding
0017127 : Molecular Function : cholesterol transporter activity
0034364 : Cellular Component : high-density lipoprotein particle
0043691 : Biological Process : reverse cholesterol transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, lyso 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202306)
HIX0202306
HIT000039997
(
BC025739
)
(Cholesteryl ester transfer protein; Lipid transfer protein I; Precursor;)
genome : 56,995,876 - 57,017,757 (21,882)
query : 1 - 1,677 (1,677/1,720)
16 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.986;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001124 : Lipid-binding serum glycoprotein, C-terminal
IPR017130 : Cholesteryl ester transfer
IPR017942 : Lipid-binding serum glycoprotein, N-terminal
IPR017943 : Bactericidal permeability-increasing protein, alpha/beta domain
IPR017954 : Lipid-binding serum glycoprotein, conserved site
GO :
0008289 : Molecular Function : lipid binding
0017127 : Molecular Function : cholesterol transporter activity
0034364 : Cellular Component : high-density lipoprotein particle
0043691 : Biological Process : reverse cholesterol transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, lyso 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202306)
HIX0202306
HIT000266801
(
BT020064
)
(Cholesteryl ester transfer protein; Lipid transfer protein I; Precursor;)
genome : 56,995,892 - 57,017,578 (21,687)
query : 1 - 1,302 (1,302/1,302)
15 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.986;1.000;
0.987)3'
coverage = 1.000
InterPro :
IPR001124 : Lipid-binding serum glycoprotein, C-terminal
IPR017130 : Cholesteryl ester transfer
IPR017942 : Lipid-binding serum glycoprotein, N-terminal
IPR017943 : Bactericidal permeability-increasing protein, alpha/beta domain
IPR017954 : Lipid-binding serum glycoprotein, conserved site
GO :
0008289 : Molecular Function : lipid binding
0017127 : Molecular Function : cholesterol transporter activity
0034364 : Cellular Component : high-density lipoprotein particle
0043691 : Biological Process : reverse cholesterol transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, lyso 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202306)
HIX0202306
HIT000682030 (
ENST00000569082
)
(Lipid-binding serum glycoprotein, N-terminal domain containing protein.)
genome : 56,995,894 - 57,007,280 (11,387)
query : 1 - 890 (890/890)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202306)
HIX0202306
HIT000196538
(
M83573
)
(Cholesteryl ester transfer protein; Lipid transfer protein I; Precursor;)
genome : 56,995,915 - 57,017,756 (21,842)
query : 1 - 1,457 (1,457/1,457)
15 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.986;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR001124 : Lipid-binding serum glycoprotein, C-terminal
IPR017130 : Cholesteryl ester transfer
IPR017942 : Lipid-binding serum glycoprotein, N-terminal
IPR017943 : Bactericidal permeability-increasing protein, alpha/beta domain
IPR017954 : Lipid-binding serum glycoprotein, conserved site
GO :
0008289 : Molecular Function : lipid binding
0017127 : Molecular Function : cholesterol transporter activity
0034364 : Cellular Component : high-density lipoprotein particle
0043691 : Biological Process : reverse cholesterol transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, cyto 13.5, nucl 11.5, E.R._mito 4.5,
mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202306)
HIX0202306
HIT000679176 (
ENST00000566128
)
(Cholesteryl ester transfer family protein.)
genome : 56,996,019 - 57,017,757 (21,739)
query : 1 - 1,733 (1,733/1,733)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 14, nucl 10, pero 3, extr 2,
mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202306)
HIX0018148
HIT000638926 (
ENST00000539881
)
(Protein NLRC5; Caterpiller protein 16.1; CLR16.1; Nucleotide-binding oligomerization domain protein 27; Nucleotide-binding oligomerization domain protein 4;)
genome : 57,023,397 - 57,082,266 (58,870)
query : 1 - 4,777 (4,777/4,777)
25 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 13.5, cyto 11.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018148)
HIX0018148
HIT000108441 (
ENST00000262510
)
(Protein NLRC5; Caterpiller protein 16.1; CLR16.1; Nucleotide-binding oligomerization domain protein 27; Nucleotide-binding oligomerization domain protein 4;)
genome : 57,023,410 - 57,117,436 (94,027)
query : 1 - 6,822 (6,822/6,822)
49 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 11.5, nucl 11, cyto 10, pero 6, mito 2,
extr_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018148)
HIX0018148
HIT000117878 (
ENST00000308149
)
(Protein NLRC5; Caterpiller protein 16.1; CLR16.1; Nucleotide-binding oligomerization domain protein 27; Nucleotide-binding oligomerization domain protein 4;)
genome : 57,023,410 - 57,117,436 (94,027)
query : 1 - 6,735 (6,735/6,735)
48 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 11.5, cyto 11, nucl 10, pero 6, mito 2,
extr_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018148)
HIX0018148
HIT000534870 (
ENST00000436936
)
(Protein NLRC5; Caterpiller protein 16.1; CLR16.1; Nucleotide-binding oligomerization domain protein 27; Nucleotide-binding oligomerization domain protein 4;)
genome : 57,023,410 - 57,117,436 (94,027)
query : 1 - 6,886 (6,886/6,886)
49 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 11.5, nucl 11, cyto 10, pero 6, mito 2,
extr_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018148)
HIX0018148
HIT000021885
(
AK097030
)
(Protein NLRC5; Caterpiller protein 16.1; CLR16.1; Nucleotide-binding oligomerization domain protein 27; Nucleotide-binding oligomerization domain protein 4;)
genome : 57,023,459 - 57,065,015 (41,557)
query : 2 - 2,708 (2,707/2,712)
10 exons
identity = 0.976
5'(1.000;1.000;1.000;1.000;1.000;0.999;1.000;
1.000;1.000;0.697)3'
coverage = 0.998
InterPro :
IPR007111 : NACHT nucleoside triphosphatase
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 12.5, cyto 9, pero 3, extr 2,
mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018148)
HIX0018148
HIT000637318 (
ENST00000538273
)
(Protein NLRC5; Caterpiller protein 16.1; CLR16.1; Nucleotide-binding oligomerization domain protein 27; Nucleotide-binding oligomerization domain protein 4;)
genome : 57,023,475 - 57,055,024 (31,550)
query : 1 - 560 (560/560)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 11.5, cyto_nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018148)
HIX0018148
HIT000642186 (
ENST00000543141
)
(Hypothetical short protein.)
genome : 57,023,475 - 57,026,356 (2,882)
query : 1 - 563 (563/563)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 10, cyto_nucl 10, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018148)
HIX0018148
HIT000634703 (
ENST00000535658
)
(Conserved hypothetical protein.)
genome : 57,023,506 - 57,025,038 (1,533)
query : 1 - 527 (527/527)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 12, extr 11, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018148)
HIX0018148
HIT000643686 (
ENST00000544641
)
(Protein NLRC5; Caterpiller protein 16.1; CLR16.1; Nucleotide-binding oligomerization domain protein 27; Nucleotide-binding oligomerization domain protein 4;)
genome : 57,037,765 - 57,054,848 (17,084)
query : 1 - 594 (594/594)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 12, mito 10, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018148)
HIX0018148
HIT000637104 (
ENST00000538059
)
(Conserved hypothetical protein.)
genome : 57,038,398 - 57,054,681 (16,284)
query : 1 - 282 (282/282)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 12, nucl 11.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018148)
HIX0223675
HIT000679735 (
ENST00000566704
)
(Armadillo-like helical domain containing protein.)
genome : 57,046,983 - 57,048,012 (1,030)
query : 1 - 1,030 (1,030/1,030)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 8, cyto_nucl 7.5, nucl 3, golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0223675)
HIX0018148
HIT000014962
(
AK074182
)
(Protein NLRC5; Caterpiller protein 16.1; CLR16.1; Nucleotide-binding oligomerization domain protein 27; Nucleotide-binding oligomerization domain protein 4;)
genome : 57,050,985 - 57,082,129 (31,145)
query : 13 - 4,520 (4,508/4,520)
24 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.983;1.000;1.000;0.998;1.000;
0.978;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 0.997
InterPro :
IPR007111 : NACHT nucleoside triphosphatase
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 13.5, cyto 11.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018148)
HIX0018148
HIT000210464 (
NM_032206
)
(Protein NLRC5; Caterpiller protein 16.1; CLR16.1; Nucleotide-binding oligomerization domain protein 27; Nucleotide-binding oligomerization domain protein 4;)
genome : 57,050,986 - 57,117,436 (66,451)
query : 1 - 6,724 (6,724/6,742)
48 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 11.5, nucl 11, cyto 10, pero 6, mito 2,
extr_plas 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018148)
HIX0018148
HIT000638189 (
ENST00000539144
)
(Protein NLRC5; Caterpiller protein 16.1; CLR16.1; Nucleotide-binding oligomerization domain protein 27; Nucleotide-binding oligomerization domain protein 4;)
genome : 57,054,625 - 57,117,431 (62,807)
query : 1 - 6,505 (6,505/6,505)
46 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 11.5, cyto 11, nucl 10, pero 6, mito 2,
extr_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018148)
HIX0018148
HIT000078813
(
AF389420
)
Representative transcript
(Protein NLRC5; Caterpiller protein 16.1; CLR16.1; Nucleotide-binding oligomerization domain protein 27; Nucleotide-binding oligomerization domain protein 4;)
genome : 57,054,625 - 57,116,440 (61,816)
query : 1 - 5,601 (5,601/5,601)
47 exons
identity = 0.998
5'(0.990;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.967;1.000;1.000;1.000;0.978;1.000;
1.000;1.000;1.000;0.989;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001611 : Leucine-rich repeat
IPR007111 : NACHT nucleoside triphosphatase
IPR025875 : Leucine rich repeat 4
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 11.5, nucl 11, cyto 10, pero 6, mito 2,
extr_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018148)
HIX0018148
HIT000395494
(
EF452236
)
(Protein NLRC5; Caterpiller protein 16.1; CLR16.1; Nucleotide-binding oligomerization domain protein 27; Nucleotide-binding oligomerization domain protein 4;)
genome : 57,054,625 - 57,116,440 (61,816)
query : 1 - 5,601 (5,601/5,601)
47 exons
identity = 0.998
5'(0.990;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.967;1.000;1.000;1.000;0.978;1.000;
1.000;1.000;1.000;0.989;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001611 : Leucine-rich repeat
IPR007111 : NACHT nucleoside triphosphatase
IPR025875 : Leucine rich repeat 4
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 11.5, nucl 11, cyto 10, pero 6, mito 2,
extr_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018148)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK220210
Canis
sp. (Dog) : ENSCAFT00000014230
Danio
sp. (Zebrafish) : ENSDART00000033762
Equus
sp. (Horse) : ENSECAT00000015396
Monodelphis
sp. (Opossum) : ENSMODT00000031418
Pongo
sp. (Orangutan) : ENSPPYT00000008677
Bos
sp. (Cow) : XM_001250846
Rattus
sp. (Rat) : XM_214630
Pan
sp. (Chimpanzee) : XR_023343
HIX0018148
HIT000008636
(
AK025362
)
(Protein NLRC5; Caterpiller protein 16.1; CLR16.1; Nucleotide-binding oligomerization domain protein 27; Nucleotide-binding oligomerization domain protein 4;)
genome : 57,059,599 - 57,095,839 (36,241)
query : 3 - 3,478 (3,476/3,495)
28 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.978;1.000;1.000;1.000;1.000;
0.989;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.985;1.000;0.988;1.000)3'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10, pero 8, mito_pero 6, nucl 5, cyto_golg 5,
extr 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018148)
HIX0018148
HIT000637850 (
ENST00000538805
)
(Protein NLRC5; Caterpiller protein 16.1; CLR16.1; Nucleotide-binding oligomerization domain protein 27; Nucleotide-binding oligomerization domain protein 4;)
genome : 57,059,599 - 57,095,915 (36,317)
query : 1 - 3,552 (3,552/3,552)
28 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 9.5, nucl 6.5, plas 5.5,
extr_plas 5, extr 3.5, mito_pero 3, mito 2.5, pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018148)
HIX0018148
HIT000055389
(
BX640842
)
(Protein NLRC5; Caterpiller protein 16.1; CLR16.1; Nucleotide-binding oligomerization domain protein 27; Nucleotide-binding oligomerization domain protein 4;)
genome : 57,059,610 - 57,095,839 (36,230)
query : 1 - 2,791 (2,791/2,811)
28 exons
identity = 0.997
5'(0.993;0.998;1.000;1.000;1.000;1.000;1.000;
1.000;0.976;1.000;0.989;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.976;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 16, cyto 5, plas 3, cyto_pero 3, cyto_golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018148)
HIX0018148
HIT000015306
(
AK090439
)
(Protein NLRC5; Caterpiller protein 16.1; CLR16.1; Nucleotide-binding oligomerization domain protein 27; Nucleotide-binding oligomerization domain protein 4;)
genome : 57,059,674 - 57,117,431 (57,758)
query : 1 - 5,833 (5,833/5,833)
44 exons
identity = 0.997
5'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
0.988;1.000;0.978;1.000;1.000;0.989;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.988;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR007111 : NACHT nucleoside triphosphatase
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12, cyto_nucl 10.3333, nucl 7.5,
cyto_mito 7.33333, plas 5, pero 3, extr_plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018148)
HIX0018148
HIT000644126 (
ENST00000545081
)
(Protein NLRC5; Caterpiller protein 16.1; CLR16.1; Nucleotide-binding oligomerization domain protein 27; Nucleotide-binding oligomerization domain protein 4;)
genome : 57,059,674 - 57,117,431 (57,758)
query : 1 - 5,832 (5,832/5,832)
44 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 11.1667, cyto 8.5,
cyto_pero 6.33333, extr 4, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018148)
HIX0018148
HIT000637155 (
ENST00000538110
)
(Protein NLRC5; Caterpiller protein 16.1; CLR16.1; Nucleotide-binding oligomerization domain protein 27; Nucleotide-binding oligomerization domain protein 4;)
genome : 57,060,335 - 57,095,845 (35,511)
query : 1 - 2,656 (2,656/2,656)
27 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 10, nucl 6.5, extr_plas 4,
plas 3.5, extr 3.5, pero 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018148)
HIX0018148
HIT000635276 (
ENST00000536231
)
(Protein NLRC5; Caterpiller protein 16.1; CLR16.1; Nucleotide-binding oligomerization domain protein 27; Nucleotide-binding oligomerization domain protein 4;)
genome : 57,060,551 - 57,063,996 (3,446)
query : 1 - 868 (868/868)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 7, cyto_nucl 6, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018148)
HIX0018148
HIT000642075 (
ENST00000543030
)
(Protein NLRC5; Caterpiller protein 16.1; CLR16.1; Nucleotide-binding oligomerization domain protein 27; Nucleotide-binding oligomerization domain protein 4;)
genome : 57,060,791 - 57,095,878 (35,088)
query : 1 - 1,894 (1,894/1,894)
23 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 10.5, nucl 7.5, pero 5, plas 4.5,
extr_plas 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018148)
HIX0018148
HIT000014913
(
AK074133
)
(Protein NLRC5; Caterpiller protein 16.1; CLR16.1; Nucleotide-binding oligomerization domain protein 27; Nucleotide-binding oligomerization domain protein 4;)
genome : 57,068,084 - 57,117,443 (49,360)
query : 1 - 4,121 (4,121/4,121)
37 exons
identity = 0.999
5'(1.000;1.000;0.989;1.000;1.000;1.000;1.000;
1.000;1.000;0.989;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 16, cyto 15.5, nucl 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018148)
HIX0018148
HIT000637498 (
ENST00000538453
)
(Protein NLRC5; Caterpiller protein 16.1; CLR16.1; Nucleotide-binding oligomerization domain protein 27; Nucleotide-binding oligomerization domain protein 4;)
genome : 57,068,084 - 57,117,443 (49,360)
query : 1 - 4,121 (4,121/4,121)
37 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 16, cyto 15.5, nucl 13.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018148)
HIX0018148
HIT000259136
(
BC050527
)
(Protein NLRC5; Caterpiller protein 16.1; CLR16.1; Nucleotide-binding oligomerization domain protein 27; Nucleotide-binding oligomerization domain protein 4;)
genome : 57,074,600 - 57,117,436 (42,837)
query : 1 - 3,617 (3,617/3,654)
33 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.988;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.8333, nucl 14.5, cyto 12,
cyto_pero 7.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018148)
HIX0018148
HIT000639227 (
ENST00000540182
)
(Protein NLRC5; Caterpiller protein 16.1; CLR16.1; Nucleotide-binding oligomerization domain protein 27; Nucleotide-binding oligomerization domain protein 4;)
genome : 57,074,600 - 57,117,436 (42,837)
query : 1 - 3,617 (3,617/3,617)
33 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.8333, nucl 14.5, cyto 12,
cyto_pero 7.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018148)
HIX0018148
HIT000637975 (
ENST00000538930
)
(Protein NLRC5; Caterpiller protein 16.1; CLR16.1; Nucleotide-binding oligomerization domain protein 27; Nucleotide-binding oligomerization domain protein 4;)
genome : 57,075,233 - 57,096,656 (21,424)
query : 1 - 1,686 (1,686/1,686)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 4, lyso 4, nucl 2, E.R._mito 2,
cyto_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018148)
HIX0018148
HIT000637823 (
ENST00000538778
)
(Protein NLRC5; Caterpiller protein 16.1; CLR16.1; Nucleotide-binding oligomerization domain protein 27; Nucleotide-binding oligomerization domain protein 4;)
genome : 57,075,320 - 57,095,431 (20,112)
query : 1 - 1,019 (1,019/1,019)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, extr 12, cyto_pero 3.5, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018148)
HIX0018148
HIT000640065 (
ENST00000541020
)
(Protein NLRC5; Caterpiller protein 16.1; CLR16.1; Nucleotide-binding oligomerization domain protein 27; Nucleotide-binding oligomerization domain protein 4;)
genome : 57,075,400 - 57,077,720 (2,321)
query : 1 - 465 (465/465)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto_nucl 4, nucl 3.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018148)
HIX0018148
HIT000261022
(
BC063566
)
(Protein NLRC5; Caterpiller protein 16.1; CLR16.1; Nucleotide-binding oligomerization domain protein 27; Nucleotide-binding oligomerization domain protein 4;)
genome : 57,075,952 - 57,117,432 (41,481)
query : 1 - 3,506 (3,506/3,555)
31 exons
identity = 0.999
5'(1.000;1.000;1.000;0.989;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR001611 : Leucine-rich repeat
IPR025875 : Leucine rich repeat 4
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_pero 9, extr 8, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018148)
HIX0018148
HIT000633976 (
ENST00000534931
)
(Protein NLRC5; Caterpiller protein 16.1; CLR16.1; Nucleotide-binding oligomerization domain protein 27; Nucleotide-binding oligomerization domain protein 4;)
genome : 57,079,209 - 57,088,754 (9,546)
query : 1 - 546 (546/549)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 11.5, extr 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018148)
HIX0018148
HIT000096094
(
BC040278
)
(Protein NLRC5; Caterpiller protein 16.1; CLR16.1; Nucleotide-binding oligomerization domain protein 27; Nucleotide-binding oligomerization domain protein 4;)
genome : 57,079,338 - 57,117,436 (38,099)
query : 4 - 3,430 (3,427/3,445)
30 exons
identity = 0.997
5'(0.897;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15.5, cyto 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018148)
HIX0018148
HIT000636101 (
ENST00000537056
)
(Protein NLRC5; Caterpiller protein 16.1; CLR16.1; Nucleotide-binding oligomerization domain protein 27; Nucleotide-binding oligomerization domain protein 4;)
genome : 57,079,338 - 57,117,436 (38,099)
query : 4 - 3,430 (3,427/3,430)
30 exons
identity = 0.998
5'(0.897;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 15.5, cyto 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018148)