bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0012990
HIT000040886
(
BC029818
)
Representative transcript
(Cytochrome c oxidase subunit 6A2, mitochondrial precursor.)
genome : 31,439,055 - 31,439,709 (655)
query : 1 - 397 (397/423)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.997
EC number :
EC 1.9.3.1
KEGG pathway :
00190 : Oxidative phosphorylation (12)
00910 : Nitrogen metabolism (50)
01100 : Metabolic pathways (1346)
InterPro :
IPR001349 : Cytochrome c oxidase, subunit VIa
IPR018507 : Cytochrome c oxidase, subunit VIa, conserved site
GO :
0004129 : Molecular Function : cytochrome-c oxidase activity
0005743 : Cellular Component : mitochondrial inner membrane
0005751 : Cellular Component : mitochondrial respiratory chain complex IV
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 17, extr 8, extr_plas 7.5, plas 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012990)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : BC081493
Bos
sp. (Cow) : BC103117
Tetraodon
sp. (Tetraodon) : CR678321
Pongo
sp. (Orangutan) : CR858443
Equus
sp. (Horse) : ENSECAT00000011975
Oryzias
sp. (Medaka) : ENSORLT00000002603
Takifugu
sp. (Fugu) : SINFRUT00000132620
Mus
sp. (Mouse) : U08439
Rattus
sp. (Rat) : X12554
Macaca
sp. (Macaque) : XM_001112927
Pan
sp. (Chimpanzee) : XM_001158801
Monodelphis
sp. (Opossum) : XM_001363113
Canis
sp. (Dog) : XM_536907
HIX0012990
HIT000201912 (
NM_005205
)
(Cytochrome c oxidase subunit 6A2, mitochondrial precursor.)
genome : 31,439,052 - 31,439,749 (698)
query : 1 - 440 (440/441)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.998
EC number :
EC 1.9.3.1
KEGG pathway :
00190 : Oxidative phosphorylation (12)
00910 : Nitrogen metabolism (50)
01100 : Metabolic pathways (1346)
InterPro :
IPR001349 : Cytochrome c oxidase, subunit VIa
IPR018507 : Cytochrome c oxidase, subunit VIa, conserved site
GO :
0004129 : Molecular Function : cytochrome-c oxidase activity
0005743 : Cellular Component : mitochondrial inner membrane
0005751 : Cellular Component : mitochondrial respiratory chain complex IV
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 17, extr 8, extr_plas 7.5, plas 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012990)
HIX0012990
HIT000196528
(
M83308
)
(Cytochrome c oxidase subunit 6A2, mitochondrial; Cytochrome c oxidase polypeptide VIa-heart; COXVIAH; Cytochrome c oxidase subunit VIA-muscle; COX VIa-M; Precursor;)
genome : 31,439,054 - 31,439,681 (628)
query : 2 - 371 (370/371)
3 exons
identity = 0.995
3'(1.000;0.985;1.000)5'
coverage = 0.997
EC number :
EC 1.9.3.1
KEGG pathway :
00190 : Oxidative phosphorylation (12)
00910 : Nitrogen metabolism (50)
01100 : Metabolic pathways (1346)
InterPro :
IPR001349 : Cytochrome c oxidase, subunit VIa
IPR018507 : Cytochrome c oxidase, subunit VIa, conserved site
GO :
0004129 : Molecular Function : cytochrome-c oxidase activity
0005743 : Cellular Component : mitochondrial inner membrane
0005751 : Cellular Component : mitochondrial respiratory chain complex IV
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 20, extr 8, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012990)
HIX0012990
HIT000112856 (
ENST00000287490
)
(Cytochrome c oxidase subunit 6A2, mitochondrial precursor.)
genome : 31,439,055 - 31,439,721 (667)
query : 1 - 409 (409/409)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012990)
HIX0012969
HIT000021103
(
AK096248
)
Representative transcript
(Similar to Uncharacterized protein; Fragment;)
genome : 31,445,815 - 31,454,346 (8,532)
query : 3 - 1,910 (1,908/1,910)
3 exons
identity = 0.993
3'(0.992;0.990;1.000)5'
coverage = 0.999
InterPro :
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
IPR015880 : Zinc finger, C2H2-like
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012969)
HIX0012969
HIT000051799
(
BC036762
)
(Similar to Uncharacterized protein; Fragment;)
genome : 31,446,759 - 31,448,507 (1,749)
query : 17 - 1,765 (1,749/1,860)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.988
InterPro :
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
IPR015880 : Zinc finger, C2H2-like
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012969)
HIX0012969
HIT000120599 (
ENST00000315678
)
(Similar to Uncharacterized protein; Fragment;)
genome : 31,446,885 - 31,454,348 (7,464)
query : 1 - 2,013 (2,013/2,013)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto_nucl 10.8333, mito 10, cyto 4.5,
cyto_pero 3.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012969)
HIX0012969
HIT000560395 (
NM_001136509
)
(Similar to Uncharacterized protein; Fragment;)
genome : 31,446,885 - 31,454,348 (7,464)
query : 1 - 2,013 (2,013/2,013)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
IPR015880 : Zinc finger, C2H2-like
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012969)
HIX0012969
HIT000423860
(
AK291063
)
(Similar to Uncharacterized protein; Fragment;)
genome : 31,446,885 - 31,454,106 (7,222)
query : 1 - 1,771 (1,771/1,771)
2 exons
identity = 0.999
3'(0.999;1.000)5'
coverage = 1.000
InterPro :
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
IPR015880 : Zinc finger, C2H2-like
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012969)
HIX0012969
pHIT000089792 ( pHIT000089792 )
(Similar to Uncharacterized protein; Fragment;)
genome : 31,447,875 - 31,471,000 (23,126)
query : 1 - 1,260 (1,260/1,260)
3 exons
InterPro :
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012969)
CAGE tag :
H05BA15K1301,H05BC86P1402,H05BD79E1703
H11BA01L0509,H11BA21N2408
HIX0012969
pHIT000115581 ( pHIT000115581 )
(Similar to Uncharacterized protein; Fragment;)
genome : 31,447,875 - 31,471,000 (23,126)
query : 1 - 1,521 (1,521/1,521)
5 exons
InterPro :
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012969)
CAGE tag :
T16R01DECBCA
HIX0038699
HIT000067322
(
AF086443
)
Representative transcript
(Hypothetical short protein.)
genome : 31,460,857 - 31,464,814 (3,958)
query : 1 - 448 (448/457)
2 exons
identity = 0.996
3'(1.000;0.990)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 13, extr 10, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038699)
HIX0202252
HIT000045444
(
AK125571
)
(Similar to Uncharacterized protein; Fragment;)
genome : 31,468,032 - 31,470,647 (2,616)
query : 1 - 2,616 (2,616/2,616)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto 8, cyto_nucl 7, extr 5, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202252)
HIX0202252
HIT000490414
(
AK295790
)
Representative transcript
(Armadillo repeat-containing protein 5 isoform a.)
genome : 31,469,594 - 31,478,426 (8,833)
query : 1 - 3,433 (3,433/3,433)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;0.999;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR000210 : BTB/POZ-like
IPR000225 : Armadillo
IPR011333 : BTB/POZ fold
IPR011989 : Armadillo-like helical
IPR016024 : Armadillo-type fold
GO :
0005488 : Molecular Function : binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, nucl 8.5, mito 6, cyto_nucl 5, extr_plas 5,
mito_pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202252)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK131111
Rattus
sp. (Rat) : BC087086
Bos
sp. (Cow) : ENSBTAT00000003076
Equus
sp. (Horse) : ENSECAT00000010176
Monodelphis
sp. (Opossum) : ENSMODT00000001887
Oryzias
sp. (Medaka) : ENSORLT00000002621
Pongo
sp. (Orangutan) : ENSPPYT00000009059
Tetraodon
sp. (Tetraodon) : GSTENT00027794001
Takifugu
sp. (Fugu) : SINFRUT00000180522
Macaca
sp. (Macaque) : XM_001105174
Canis
sp. (Dog) : XM_547051
Danio
sp. (Zebrafish) : XM_693324
HIX0202252
HIT000506953 (
ENST00000408912
)
(Armadillo repeat-containing protein 5 isoform a.)
genome : 31,469,594 - 31,478,426 (8,833)
query : 1 - 3,433 (3,433/3,433)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR000210 : BTB/POZ-like
IPR000225 : Armadillo
IPR011333 : BTB/POZ fold
IPR011989 : Armadillo-like helical
IPR016024 : Armadillo-type fold
GO :
0005488 : Molecular Function : binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, nucl 8.5, mito 6, cyto_nucl 5, extr_plas 5,
mito_pero 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202252)
HIX0202363
HIT000451798
(
DQ585267
)
Representative transcript
(Non-protein coding transcript.)
genome : 31,469,878 - 31,469,909 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202363)
HIX0202252
HIT000489521
(
AK294897
)
(Armadillo repeat-containing protein 5 isoform a.)
genome : 31,470,268 - 31,478,405 (8,138)
query : 1 - 3,454 (3,454/3,454)
7 exons
identity = 0.999
5'(0.997;0.998;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000210 : BTB/POZ-like
IPR000225 : Armadillo
IPR011333 : BTB/POZ fold
IPR011989 : Armadillo-like helical
IPR016024 : Armadillo-type fold
GO :
0005488 : Molecular Function : binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, cyto_mito 10.3333, nucl 7.5, extr 5,
cyto_nucl 4.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202252)
HIX0202252
HIT000637234 (
ENST00000538189
)
(Armadillo repeat-containing protein 5 isoform a.)
genome : 31,470,268 - 31,478,405 (8,138)
query : 1 - 3,454 (3,454/3,454)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000210 : BTB/POZ-like
IPR000225 : Armadillo
IPR011333 : BTB/POZ fold
IPR011989 : Armadillo-like helical
IPR016024 : Armadillo-type fold
GO :
0005488 : Molecular Function : binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, cyto_mito 10.3333, nucl 7.5, extr 5,
cyto_nucl 4.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202252)
HIX0202252
HIT000209438 (
NM_024742
)
(Armadillo repeat-containing protein 5 isoform b.)
genome : 31,470,317 - 31,478,488 (8,172)
query : 1 - 4,673 (4,673/4,707)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000225 : Armadillo
IPR011989 : Armadillo-like helical
IPR016024 : Armadillo-type fold
GO :
0005488 : Molecular Function : binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 12, extr 7, cyto 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202252)
HIX0202252
HIT000485724 (
NM_001105247
)
(Armadillo repeat-containing protein 5 isoform a.)
genome : 31,470,317 - 31,478,488 (8,172)
query : 1 - 3,615 (3,615/3,649)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 11, extr 8, cyto 6.5, lyso 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202252)
HIX0202252
HIT000085324
(
AY217348
)
(Armadillo repeat-containing protein 5 isoform b.)
genome : 31,470,317 - 31,478,487 (8,171)
query : 1 - 4,672 (4,672/4,672)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 12, extr 7, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202252)
HIX0202252
HIT000110286 (
ENST00000268314
)
(Armadillo repeat-containing protein 5 isoform a.)
genome : 31,470,317 - 31,478,485 (8,169)
query : 1 - 3,612 (3,612/3,612)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 11, extr 8, cyto 6.5, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202252)
HIX0202252
HIT000510599 (
ENST00000412665
)
(Similar to Armadillo repeat-containing protein 5 isoform a.)
genome : 31,470,317 - 31,478,485 (8,169)
query : 1 - 3,036 (3,036/3,036)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000210 : BTB/POZ-like
IPR011333 : BTB/POZ fold
IPR011989 : Armadillo-like helical
IPR016024 : Armadillo-type fold
GO :
0005488 : Molecular Function : binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 14.3333, cyto_mito 7.5, cyto 7,
mito 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202252)
HIX0202252
HIT000554944 (
ENST00000457010
)
(Armadillo repeat-containing protein 5 isoform b.)
genome : 31,470,317 - 31,478,485 (8,169)
query : 1 - 4,670 (4,670/4,670)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000225 : Armadillo
IPR011989 : Armadillo-like helical
IPR016024 : Armadillo-type fold
GO :
0005488 : Molecular Function : binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 12, extr 7, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202252)
HIX0202252
HIT000036910
(
BC014945
)
(Similar to Armadillo repeat-containing protein 5 isoform a.)
genome : 31,470,408 - 31,478,488 (8,081)
query : 1 - 3,020 (3,020/3,054)
7 exons
identity = 1.000
5'(0.995;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000210 : BTB/POZ-like
IPR000225 : Armadillo
IPR011333 : BTB/POZ fold
IPR011989 : Armadillo-like helical
IPR016024 : Armadillo-type fold
GO :
0005488 : Molecular Function : binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 14.5, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202252)
HIX0202252
HIT000007704
(
AK024430
)
(Armadillo repeat-containing protein 5 isoform b.)
genome : 31,470,824 - 31,478,487 (7,664)
query : 1 - 4,165 (4,165/4,165)
4 exons
identity = 1.000
5'(1.000;0.991;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000225 : Armadillo
IPR011989 : Armadillo-like helical
IPR016024 : Armadillo-type fold
GO :
0005488 : Molecular Function : binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 12, extr 7, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202252)
HIX0202252
HIT000006399
(
AK023125
)
(Similar to Armadillo repeat-containing protein 5 isoform a.)
genome : 31,471,266 - 31,478,487 (7,222)
query : 1 - 2,761 (2,761/2,761)
5 exons
identity = 0.999
5'(0.982;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR000210 : BTB/POZ-like
IPR000225 : Armadillo
IPR011333 : BTB/POZ fold
IPR011989 : Armadillo-like helical
IPR016024 : Armadillo-type fold
GO :
0005488 : Molecular Function : binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, nucl 8.5, cyto_nucl 6, lyso 6, extr_plas 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202252)
HIX0202252
HIT000491739
(
AK297115
)
(Similar to Armadillo repeat-containing protein 5 isoform a.)
genome : 31,471,282 - 31,478,486 (7,205)
query : 1 - 2,072 (2,072/2,072)
7 exons
identity = 1.000
5'(1.000;0.991;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000210 : BTB/POZ-like
IPR011333 : BTB/POZ fold
IPR011989 : Armadillo-like helical
IPR016024 : Armadillo-type fold
GO :
0005488 : Molecular Function : binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, pero 6, lyso 5, nucl 2, cyto 2, cyto_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202252)
HIX0202380
pHIT000027062 ( pHIT000027062 )
Representative transcript
(Zinc finger, C2H2-type domain containing protein.)
genome : 31,447,875 - 31,471,000 (23,126)
query : 1 - 1,695 (1,695/1,695)
5 exons
InterPro :
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202380)
CAGE tag :
H04BA56A0909,H05BB04E0904,H05BB32M1706
H05BE08M2210,H05BE13J2303
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK084086
Rattus
sp. (Rat) : ENSRNOT00000026979
HIX0202380
pHIT000027062 ( pHIT000027062 )
Representative transcript
(Zinc finger, C2H2-type domain containing protein.)
genome : 31,447,875 - 31,471,000 (23,126)
query : 1 - 1,695 (1,695/1,695)
5 exons
InterPro :
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202380)
CAGE tag :
H04BA56A0909,H05BB04E0904,H05BB32M1706
H05BE08M2210,H05BE13J2303
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK084086
Rattus
sp. (Rat) : ENSRNOT00000026979
HIX0012969
pHIT000089792 ( pHIT000089792 )
(Similar to Uncharacterized protein; Fragment;)
genome : 31,447,875 - 31,471,000 (23,126)
query : 1 - 1,260 (1,260/1,260)
3 exons
InterPro :
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012969)
CAGE tag :
H05BA15K1301,H05BC86P1402,H05BD79E1703
H11BA01L0509,H11BA21N2408
HIX0012969
pHIT000115581 ( pHIT000115581 )
(Similar to Uncharacterized protein; Fragment;)
genome : 31,447,875 - 31,471,000 (23,126)
query : 1 - 1,521 (1,521/1,521)
5 exons
InterPro :
IPR007087 : Zinc finger, C2H2-type
IPR013087 : Zinc finger, C2H2-type/integrase, DNA-binding
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012969)
CAGE tag :
T16R01DECBCA
AC026471.6
31438407-31478406 F +
NCBI