bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0012676
HIT000131474 (
ENST00000338844
)
(Tryptase alpha/beta-1 precursor.)
genome : 1,290,678 - 1,292,555 (1,878)
query : 1 - 1,194 (1,194/1,194)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 8.5, cyto_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012676)
HIX0012676
HIT000200136 (
NM_003294
)
(Tryptase alpha/beta-1 precursor.)
genome : 1,290,678 - 1,292,555 (1,878)
query : 1 - 1,194 (1,194/1,194)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.21.59
InterPro :
IPR001254 : Peptidase S1/S6, chymotrypsin/Hap
IPR001314 : Peptidase S1A, chymotrypsin-type
IPR009003 : Peptidase cysteine/serine, trypsin-like
IPR018114 : Peptidase S1/S6, chymotrypsin/Hap, active site
GO :
0003824 : Molecular Function : catalytic activity
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, lyso 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012676)
HIX0012676
HIT000521060 (
ENST00000423126
)
(Similar to Cholesterol 24-hydroxylase; CH24H; EC=1.14.13.98; Cytochrome P450 46A1;)
genome : 1,290,678 - 1,292,356 (1,679)
query : 1 - 754 (754/754)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001254 : Peptidase S1/S6, chymotrypsin/Hap
IPR001314 : Peptidase S1A, chymotrypsin-type
IPR009003 : Peptidase cysteine/serine, trypsin-like
IPR018114 : Peptidase S1/S6, chymotrypsin/Hap, active site
GO :
0003824 : Molecular Function : catalytic activity
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012676)
HIX0012676
HIT000265481
(
BC074974
)
(Tryptase beta-2; Tryptase-2; EC=3.4.21.59; Tryptase II; Precursor;)
genome : 1,290,697 - 1,292,276 (1,580)
query : 1 - 896 (896/896)
6 exons
identity = 0.996
5'(1.000;1.000;0.994;0.996;1.000;0.990)3'
coverage = 1.000
InterPro :
IPR001254 : Peptidase S1/S6, chymotrypsin/Hap
IPR001314 : Peptidase S1A, chymotrypsin-type
IPR009003 : Peptidase cysteine/serine, trypsin-like
IPR018114 : Peptidase S1/S6, chymotrypsin/Hap, active site
GO :
0003824 : Molecular Function : catalytic activity
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012676)
HIX0012676
HIT000265482
(
BC074975
)
(Tryptase beta-2; Tryptase-2; EC=3.4.21.59; Tryptase II; Precursor;)
genome : 1,290,697 - 1,292,276 (1,580)
query : 1 - 896 (896/896)
6 exons
identity = 0.996
5'(0.970;0.967;0.994;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001254 : Peptidase S1/S6, chymotrypsin/Hap
IPR001314 : Peptidase S1A, chymotrypsin-type
IPR009003 : Peptidase cysteine/serine, trypsin-like
IPR018114 : Peptidase S1/S6, chymotrypsin/Hap, active site
GO :
0003824 : Molecular Function : catalytic activity
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012676)
HIX0012676
HIT000040725
(
BC029356
)
Representative transcript
(Tryptase alpha/beta-1; Tryptase-1; EC=3.4.21.59; Tryptase I; Tryptase alpha-1; Precursor;)
genome : 1,290,707 - 1,292,555 (1,849)
query : 1 - 1,165 (1,165/1,194)
6 exons
identity = 0.994
5'(1.000;1.000;0.994;0.996;1.000;0.990)3'
coverage = 1.000
InterPro :
IPR001254 : Peptidase S1/S6, chymotrypsin/Hap
IPR001314 : Peptidase S1A, chymotrypsin-type
IPR009003 : Peptidase cysteine/serine, trypsin-like
IPR018114 : Peptidase S1/S6, chymotrypsin/Hap, active site
GO :
0003824 : Molecular Function : catalytic activity
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012676)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : AF515641
Rattus
sp. (Rat) : D38455
Danio
sp. (Zebrafish) : ENSDART00000091096
Oryzias
sp. (Medaka) : ENSORLT00000001495
Canis
sp. (Dog) : M24664
Pongo
sp. (Orangutan) : NM_001159809
Takifugu
sp. (Fugu) : SINFRUT00000132098
Mus
sp. (Mouse) : X78542
Pan
sp. (Chimpanzee) : XM_001158624
Monodelphis
sp. (Opossum) : XM_001374015
HIX0012676
HIT000262101
(
BC065923
)
(Tryptase beta-2; Tryptase-2; EC=3.4.21.59; Tryptase II; Precursor;)
genome : 1,290,729 - 1,292,555 (1,827)
query : 1 - 1,353 (1,353/1,460)
5 exons
identity = 0.993
5'(0.993;0.994;0.996;1.000;0.990)3'
coverage = 1.000
InterPro :
IPR001254 : Peptidase S1/S6, chymotrypsin/Hap
IPR001314 : Peptidase S1A, chymotrypsin-type
IPR009003 : Peptidase cysteine/serine, trypsin-like
IPR018114 : Peptidase S1/S6, chymotrypsin/Hap, active site
GO :
0003824 : Molecular Function : catalytic activity
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, pero 3, mito 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012676)
HIX0012676
HIT000566388 (
ENST00000461509
)
(Tryptase alpha/beta-1 precursor.)
genome : 1,290,729 - 1,292,555 (1,827)
query : 1 - 1,353 (1,353/1,353)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001254 : Peptidase S1/S6, chymotrypsin/Hap
IPR001314 : Peptidase S1A, chymotrypsin-type
IPR009003 : Peptidase cysteine/serine, trypsin-like
IPR018114 : Peptidase S1/S6, chymotrypsin/Hap, active site
GO :
0003824 : Molecular Function : catalytic activity
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, pero 3, mito 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012676)
HIX0012676
HIT000528446 (
ENST00000430512
)
(Tryptase beta-2 precursor.)
genome : 1,290,729 - 1,292,554 (1,826)
query : 1 - 1,325 (1,325/1,325)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001254 : Peptidase S1/S6, chymotrypsin/Hap
IPR001314 : Peptidase S1A, chymotrypsin-type
IPR009003 : Peptidase cysteine/serine, trypsin-like
IPR018114 : Peptidase S1/S6, chymotrypsin/Hap, active site
GO :
0003824 : Molecular Function : catalytic activity
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012676)
HIX0012676
HIT000195349
(
M30038
)
(Similar to Tryptase beta-2 precursor.)
genome : 1,290,936 - 1,292,554 (1,619)
query : 13 - 1,154 (1,142/1,154)
5 exons
identity = 0.959
5'(0.955;0.948;0.947;0.957;0.971)3'
coverage = 0.990
InterPro :
IPR001254 : Peptidase S1/S6, chymotrypsin/Hap
IPR001314 : Peptidase S1A, chymotrypsin-type
IPR009003 : Peptidase cysteine/serine, trypsin-like
IPR018114 : Peptidase S1/S6, chymotrypsin/Hap, active site
GO :
0003824 : Molecular Function : catalytic activity
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012676)
HIX0012676
HIT000040418
(
BC028059
)
(Similar to Tryptase beta-2 precursor.)
genome : 1,290,936 - 1,292,555 (1,620)
query : 8 - 1,154 (1,147/1,206)
5 exons
identity = 0.961
5'(0.924;0.942;0.951;0.982;0.971)3'
coverage = 0.994
InterPro :
IPR001254 : Peptidase S1/S6, chymotrypsin/Hap
IPR001314 : Peptidase S1A, chymotrypsin-type
IPR009003 : Peptidase cysteine/serine, trypsin-like
IPR018114 : Peptidase S1/S6, chymotrypsin/Hap, active site
GO :
0003824 : Molecular Function : catalytic activity
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, plas 2, mito 2, E.R. 2, lyso 2, E.R._mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012676)
HIX0012676
HIT000073883
(
AF206665
)
(Similar to Tryptase beta-2 precursor.)
genome : 1,290,936 - 1,292,286 (1,351)
query : 6 - 883 (878/884)
5 exons
identity = 0.956
5'(0.924;0.942;0.951;0.982;0.962)3'
coverage = 0.993
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, plas 2, mito 2, E.R. 2, lyso 2, E.R._mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012676)
HIX0012676
HIT000215791
(
S55551
)
(Tryptase alpha/beta-1; Tryptase-1; EC=3.4.21.59; Tryptase I; Tryptase alpha-1; Precursor;)
genome : 1,290,936 - 1,292,551 (1,616)
query : 3 - 1,145 (1,143/1,145)
5 exons
identity = 0.994
5'(0.985;0.994;0.996;1.000;0.992)3'
coverage = 0.998
InterPro :
IPR001254 : Peptidase S1/S6, chymotrypsin/Hap
IPR001314 : Peptidase S1A, chymotrypsin-type
IPR009003 : Peptidase cysteine/serine, trypsin-like
IPR018114 : Peptidase S1/S6, chymotrypsin/Hap, active site
GO :
0003824 : Molecular Function : catalytic activity
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012676)
HIX0012676
HIT000095197
(
BC038416
)
(Tryptase beta-2; Tryptase-2; EC=3.4.21.59; Tryptase II; Precursor;)
genome : 1,290,936 - 1,292,555 (1,620)
query : 2 - 1,148 (1,147/1,235)
5 exons
identity = 0.993
5'(0.985;0.994;0.996;1.000;0.990)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012676)
HIX0012676
HIT000099439
(
BC051852
)
(Similar to Tryptase beta-2 precursor.)
genome : 1,290,936 - 1,292,555 (1,620)
query : 1 - 1,147 (1,147/1,207)
5 exons
identity = 0.961
5'(0.924;0.942;0.951;0.982;0.971)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, plas 2, mito 2, E.R. 2, lyso 2, E.R._mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012676)
HIX0012676
HIT000195719
(
M37488
)
(Tryptase alpha/beta-1; Tryptase-1; EC=3.4.21.59; Tryptase I; Tryptase alpha-1; Precursor;)
genome : 1,290,936 - 1,292,555 (1,620)
query : 1 - 1,143 (1,143/1,143)
5 exons
identity = 0.988
5'(0.985;0.994;0.996;1.000;0.977)3'
coverage = 1.000
InterPro :
IPR001254 : Peptidase S1/S6, chymotrypsin/Hap
IPR001314 : Peptidase S1A, chymotrypsin-type
IPR009003 : Peptidase cysteine/serine, trypsin-like
IPR018114 : Peptidase S1/S6, chymotrypsin/Hap, active site
GO :
0003824 : Molecular Function : catalytic activity
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012676)
HIX0012676
HIT000268707
(
CR541836
)
(Tryptase alpha/beta-1; Tryptase-1; EC=3.4.21.59; Tryptase I; Tryptase alpha-1; Precursor;)
genome : 1,290,940 - 1,292,238 (1,299)
query : 1 - 825 (825/825)
5 exons
identity = 0.998
5'(1.000;0.994;0.996;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001254 : Peptidase S1/S6, chymotrypsin/Hap
IPR001314 : Peptidase S1A, chymotrypsin-type
IPR009003 : Peptidase cysteine/serine, trypsin-like
IPR018114 : Peptidase S1/S6, chymotrypsin/Hap, active site
GO :
0003824 : Molecular Function : catalytic activity
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012676)
HIX0012676
HIT000195516
(
M33492
)
(Similar to Tryptase beta-2; Tryptase-2; EC=3.4.21.59; Tryptase II; Precursor;)
genome : 1,290,942 - 1,292,543 (1,602)
query : 1 - 1,128 (1,128/1,128)
5 exons
identity = 0.995
5'(1.000;0.994;0.996;1.000;0.991)3'
coverage = 1.000
InterPro :
IPR001254 : Peptidase S1/S6, chymotrypsin/Hap
IPR001314 : Peptidase S1A, chymotrypsin-type
IPR009003 : Peptidase cysteine/serine, trypsin-like
IPR018114 : Peptidase S1/S6, chymotrypsin/Hap, active site
GO :
0003824 : Molecular Function : catalytic activity
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012676)
HIX0012676
HIT000195515
(
M33491
)
(Similar to Tryptase alpha/beta-1; Tryptase-1; EC=3.4.21.59; Tryptase I; Tryptase alpha-1; Precursor;)
genome : 1,290,944 - 1,292,554 (1,611)
query : 1 - 1,137 (1,137/1,137)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001254 : Peptidase S1/S6, chymotrypsin/Hap
IPR001314 : Peptidase S1A, chymotrypsin-type
IPR009003 : Peptidase cysteine/serine, trypsin-like
IPR018114 : Peptidase S1/S6, chymotrypsin/Hap, active site
GO :
0003824 : Molecular Function : catalytic activity
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, lyso 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012676)
HIX0012676
HIT000073884
(
AF206666
)
(Similar to Tryptase beta-2 precursor.)
genome : 1,291,147 - 1,292,253 (1,107)
query : 10 - 768 (759/768)
4 exons
identity = 0.962
5'(0.939;0.950;0.982;0.983)3'
coverage = 0.988
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 8.5, cyto_nucl 8.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012676)
HIX0012676
HIT000646827
(
FJ931118
)
(Similar to Tryptase beta-2; Tryptase-2; EC=3.4.21.59; Tryptase II; Precursor;)
genome : 1,291,244 - 1,292,424 (1,181)
query : 1 - 860 (860/860)
4 exons
identity = 0.999
5'(1.000;0.996;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001254 : Peptidase S1/S6, chymotrypsin/Hap
IPR001314 : Peptidase S1A, chymotrypsin-type
IPR009003 : Peptidase cysteine/serine, trypsin-like
IPR018114 : Peptidase S1/S6, chymotrypsin/Hap, active site
GO :
0003824 : Molecular Function : catalytic activity
0004252 : Molecular Function : serine-type endopeptidase activity
0006508 : Biological Process : proteolysis
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 4, cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012676)
HIX0012676
HIT000073885
(
AF206667
)
(Similar to Tryptase beta-2; Tryptase-2; EC=3.4.21.59; Tryptase II; Precursor;)
genome : 1,291,252 - 1,292,517 (1,266)
query : 1 - 918 (918/918)
4 exons
identity = 0.998
5'(1.000;1.000;1.000;0.995)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 6, cyto_nucl 6, cyto 4, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012676)
AC120498.2
1283616-1299615 F +
NCBI
AluY
L1MEc
L1MC2
AluY
L1MC2
L1M1
AluSc5
L1MC2
FRAM
L1ME2
L1M5
(CGGGG)n
MIR3
L1MC4
(TG)n
(TG)n
L1MC4
(CTGGGG)n
C-rich
AluJr
MLT1F1
MIR3
L1MC3
AluSx1
L1MC3
AluSx
AluJb
(GGAA)n
L1MC4
(CA)n
L1MC4
MIR3
(CCCCG)n