bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0012400
HIT000309486 (
ENST00000355327
)
(Thrombospondin type-1 domain-containing protein 4; A disintegrin and metalloproteinase with thrombospondin motifs-like protein 6; ADAMTS-like protein 6; ADAMTSL-6; Precursor;)
genome : 71,389,291 - 72,075,722 (686,432)
query : 1 - 9,200 (9,200/9,200)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, lyso 3, E.R. 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012400)
HIX0012400
HIT000249839
(
AK131551
)
(Thrombospondin type-1 domain-containing protein 4; A disintegrin and metalloproteinase with thrombospondin motifs-like protein 6; ADAMTS-like protein 6; ADAMTSL-6; Precursor;)
genome : 71,389,291 - 72,030,170 (640,880)
query : 1 - 1,864 (1,864/1,864)
11 exons
identity = 0.999
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000884 : Thrombospondin, type 1 repeat
IPR010294 : ADAM-TS Spacer 1
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0031012 : Cellular Component : extracellular matrix
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 21, lyso 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012400)
HIX0012400
HIT000108167 (
ENST00000261862
)
(Thrombospondin type-1 domain-containing protein 4; A disintegrin and metalloproteinase with thrombospondin motifs-like protein 6; ADAMTS-like protein 6; ADAMTSL-6; Precursor;)
genome : 71,433,788 - 72,075,722 (641,935)
query : 1 - 9,145 (9,145/9,145)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, lyso 3, E.R. 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012400)
HIX0012400
HIT000209507 (
NM_024817
)
(Thrombospondin type-1 domain-containing protein 4; A disintegrin and metalloproteinase with thrombospondin motifs-like protein 6; ADAMTS-like protein 6; ADAMTSL-6; Precursor;)
genome : 71,433,788 - 72,075,722 (641,935)
query : 1 - 9,145 (9,145/9,145)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, lyso 3, E.R. 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012400)
HIX0012400
HIT000501609
(
BC140868
)
Representative transcript
(Thrombospondin type-1 domain-containing protein 4; A disintegrin and metalloproteinase with thrombospondin motifs-like protein 6; ADAMTS-like protein 6; ADAMTSL-6; Precursor;)
genome : 71,433,834 - 72,072,813 (638,980)
query : 1 - 6,192 (6,192/6,192)
17 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR000884 : Thrombospondin, type 1 repeat
IPR010294 : ADAM-TS Spacer 1
IPR010909 : PLAC
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0008233 : Molecular Function : peptidase activity
0031012 : Cellular Component : extracellular matrix
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, lyso 3, E.R. 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012400)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK138976
Bos
sp. (Cow) : BC120293
Oryzias
sp. (Medaka) : ENSORLT00000017868
Pongo
sp. (Orangutan) : ENSPPYT00000007796
Takifugu
sp. (Fugu) : SINFRUT00000156715
Macaca
sp. (Macaque) : XM_001089233
Monodelphis
sp. (Opossum) : XM_001377442
Equus
sp. (Horse) : XM_001495002
Gallus
sp. (Chicken) : XM_413780
Pan
sp. (Chimpanzee) : XM_523113
Canis
sp. (Dog) : XM_544753
Danio
sp. (Zebrafish) : XM_679483
HIX0012400
HIT000055646
(
BX641106
)
(Thrombospondin type-1 domain-containing protein 4; A disintegrin and metalloproteinase with thrombospondin motifs-like protein 6; ADAMTS-like protein 6; ADAMTSL-6; Precursor;)
genome : 71,535,130 - 72,026,249 (491,120)
query : 1 - 6,111 (6,111/6,133)
5 exons
identity = 0.999
5'(0.999)3'
coverage = 1.000
InterPro :
IPR010294 : ADAM-TS Spacer 1
IPR013273 : Peptidase M12B, ADAM-TS
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0005578 : Cellular Component : proteinaceous extracellular matrix
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
0031012 : Cellular Component : extracellular matrix
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 10.5, cyto_nucl 10, nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012400)
HIX0012400
HIT000034012
(
BC008840
)
(Thrombospondin type-1 domain-containing protein 4; A disintegrin and metalloproteinase with thrombospondin motifs-like protein 6; ADAMTS-like protein 6; ADAMTSL-6; Precursor;)
genome : 71,568,180 - 72,059,989 (491,810)
query : 1 - 2,644 (2,644/2,694)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000884 : Thrombospondin, type 1 repeat
IPR010294 : ADAM-TS Spacer 1
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0031012 : Cellular Component : extracellular matrix
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 16.5, cyto 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012400)
HIX0012400
HIT000057394
(
BX648747
)
(Thrombospondin type-1 domain-containing protein 4; A disintegrin and metalloproteinase with thrombospondin motifs-like protein 6; ADAMTS-like protein 6; ADAMTSL-6; Precursor;)
genome : 71,704,075 - 72,072,876 (368,802)
query : 1 - 5,157 (5,157/5,174)
12 exons
identity = 0.997
5'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR000884 : Thrombospondin, type 1 repeat
IPR010294 : ADAM-TS Spacer 1
IPR010909 : PLAC
IPR013273 : Peptidase M12B, ADAM-TS
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0005578 : Cellular Component : proteinaceous extracellular matrix
0008233 : Molecular Function : peptidase activity
0008237 : Molecular Function : metallopeptidase activity
0008270 : Molecular Function : zinc ion binding
0031012 : Cellular Component : extracellular matrix
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 17.5, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012400)
HIX0012400
HIT000493680
(
AK299056
)
(Thrombospondin type-1 domain-containing protein 4; A disintegrin and metalloproteinase with thrombospondin motifs-like protein 6; ADAMTS-like protein 6; ADAMTSL-6; Precursor;)
genome : 71,839,541 - 72,069,757 (230,217)
query : 1 - 2,229 (2,229/2,229)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000884 : Thrombospondin, type 1 repeat
IPR010294 : ADAM-TS Spacer 1
IPR010909 : PLAC
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0008233 : Molecular Function : peptidase activity
0031012 : Cellular Component : extracellular matrix
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, E.R. 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012400)
HIX0012400
HIT000498494
(
AK303870
)
(Thrombospondin type-1 domain-containing protein 4; A disintegrin and metalloproteinase with thrombospondin motifs-like protein 6; ADAMTS-like protein 6; ADAMTSL-6; Precursor;)
genome : 71,839,567 - 72,030,556 (190,990)
query : 1 - 1,218 (1,218/1,218)
5 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR010294 : ADAM-TS Spacer 1
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0031012 : Cellular Component : extracellular matrix
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, pero 6, E.R. 5, lyso 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012400)
HIX0012400
HIT000680747 (
ENST00000567745
)
(Thrombospondin type-1 domain-containing protein 4; A disintegrin and metalloproteinase with thrombospondin motifs-like protein 6; ADAMTS-like protein 6; ADAMTSL-6; Precursor;)
genome : 71,839,567 - 72,030,556 (190,990)
query : 1 - 1,218 (1,218/1,218)
5 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, pero 6, E.R. 5, lyso 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012400)
HIX0012400
HIT000311577 (
ENST00000357769
)
(Thrombospondin type-1 domain-containing protein 4; A disintegrin and metalloproteinase with thrombospondin motifs-like protein 6; ADAMTS-like protein 6; ADAMTSL-6; Precursor;)
genome : 71,839,575 - 72,070,965 (231,391)
query : 1 - 3,403 (3,403/3,403)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, E.R. 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012400)
HIX0012400
HIT000057363
(
BX648716
)
(Thrombospondin type-1 domain-containing protein 4; A disintegrin and metalloproteinase with thrombospondin motifs-like protein 6; ADAMTS-like protein 6; ADAMTSL-6; Precursor;)
genome : 71,839,575 - 72,070,255 (230,681)
query : 1 - 2,692 (2,692/2,710)
12 exons
identity = 0.999
5'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR000884 : Thrombospondin, type 1 repeat
IPR010294 : ADAM-TS Spacer 1
IPR010909 : PLAC
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0008233 : Molecular Function : peptidase activity
0031012 : Cellular Component : extracellular matrix
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, E.R. 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012400)
HIX0012400
HIT000252188
(
AY358143
)
(Thrombospondin type-1 domain-containing protein 4; A disintegrin and metalloproteinase with thrombospondin motifs-like protein 6; ADAMTS-like protein 6; ADAMTSL-6; Precursor;)
genome : 71,839,621 - 72,075,618 (235,998)
query : 1 - 3,134 (3,134/3,170)
3 exons
identity = 0.994
5'(0.996)3'
coverage = 0.999
InterPro :
IPR010294 : ADAM-TS Spacer 1
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0031012 : Cellular Component : extracellular matrix
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012400)
HIX0012400
HIT000680834 (
ENST00000567838
)
(Thrombospondin type-1 domain-containing protein 4; A disintegrin and metalloproteinase with thrombospondin motifs-like protein 6; ADAMTS-like protein 6; ADAMTSL-6; Precursor;)
genome : 71,952,794 - 72,059,990 (107,197)
query : 1 - 2,645 (2,645/2,645)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 8.5, cyto_nucl 5, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012400)
HIX0012400
HIT000680775 (
ENST00000567776
)
(Thrombospondin type-1 domain-containing protein 4; A disintegrin and metalloproteinase with thrombospondin motifs-like protein 6; ADAMTS-like protein 6; ADAMTSL-6; Precursor;)
genome : 71,952,864 - 72,026,250 (73,387)
query : 1 - 5,573 (5,573/5,594)
2 exons
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 10.5, extr 6, nucl 5, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012400)
HIX0012400
HIT000007046
(
AK023772
)
(Thrombospondin type-1 domain-containing protein 4; A disintegrin and metalloproteinase with thrombospondin motifs-like protein 6; ADAMTS-like protein 6; ADAMTSL-6; Precursor;)
genome : 72,020,887 - 72,070,965 (50,079)
query : 12 - 2,964 (2,953/2,964)
10 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.994;
1.000;1.000;0.995)3'
coverage = 0.996
InterPro :
IPR000884 : Thrombospondin, type 1 repeat
IPR010294 : ADAM-TS Spacer 1
IPR010909 : PLAC
GO :
0004222 : Molecular Function : metalloendopeptidase activity
0008233 : Molecular Function : peptidase activity
0031012 : Cellular Component : extracellular matrix
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 16.3333, cyto 11,
cyto_pero 6.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012400)
HIX0132559
HIT000007406
(
AK024132
)
Representative transcript
(Conserved hypothetical protein.)
genome : 72,025,348 - 72,027,162 (1,815)
query : 1 - 1,817 (1,817/1,817)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0132559)
HIX0012400
HIT000003057
(
AK000582
)
(Thrombospondin type-1 domain-containing protein 4; A disintegrin and metalloproteinase with thrombospondin motifs-like protein 6; ADAMTS-like protein 6; ADAMTSL-6; Precursor;)
genome : 72,050,172 - 72,070,954 (20,783)
query : 15 - 1,969 (1,955/1,977)
4 exons
identity = 0.977
5'(0.955;0.929;0.890;0.996)3'
coverage = 0.989
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, nucl 7, cyto_nucl 6.5, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012400)
HIX0012400
HIT000023826
(
AL049464
)
(G patch domain-containing protein 1 homolog;)
genome : 72,070,255 - 72,070,716 (462)
query : 1 - 462 (462/559)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, mito 11, nucl 3.5, cyto_nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012400)
HIX0012400
HIT000050005
(
AK130734
)
(Conserved hypothetical protein.)
genome : 72,070,969 - 72,072,875 (1,907)
query : 1 - 1,909 (1,909/1,909)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 7, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012400)
HIX0221992
HIT000206069 (
NM_016346
)
(Steroid hormone receptor family protein.)
genome : 72,102,894 - 72,107,270 (4,377)
query : 1 - 2,102 (2,102/2,102)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;0.996;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221992)
HIX0221992
HIT000481979 (
ENST00000398840
)
(Steroid hormone receptor family protein.)
genome : 72,102,894 - 72,107,270 (4,377)
query : 1 - 2,102 (2,102/2,102)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;0.996;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221992)
HIX0221992
HIT000071530
(
AF148128
)
Representative transcript
(Steroid hormone receptor family protein.)
genome : 72,102,932 - 72,107,270 (4,339)
query : 2 - 2,065 (2,064/2,065)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.992;1.000)3'
coverage = 1.000
InterPro :
IPR000003 : Retinoid X receptor/HNF4
IPR000536 : Nuclear hormone receptor, ligand-binding, core
IPR001628 : Zinc finger, nuclear hormone receptor-type
IPR001723 : Steroid hormone receptor
IPR008946 : Nuclear hormone receptor, ligand-binding
IPR013088 : Zinc finger, NHR/GATA-type
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0003707 : Molecular Function : steroid hormone receptor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0043401 : Biological Process : steroid hormone mediated signaling pathway
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221992)
HIX0221992
HIT000676016 (
ENST00000562839
)
(Steroid hormone receptor family protein.)
genome : 72,102,932 - 72,107,270 (4,339)
query : 1 - 2,065 (2,065/2,065)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221992)
HIX0221992
HIT000653600
(
HQ692847
)
(Steroid hormone receptor family protein.)
genome : 72,103,084 - 72,106,462 (3,379)
query : 1 - 1,104 (1,104/1,104)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.996;1.000)3'
coverage = 1.000
InterPro :
IPR000003 : Retinoid X receptor/HNF4
IPR000536 : Nuclear hormone receptor, ligand-binding, core
IPR001628 : Zinc finger, nuclear hormone receptor-type
IPR001723 : Steroid hormone receptor
IPR008946 : Nuclear hormone receptor, ligand-binding
IPR013088 : Zinc finger, NHR/GATA-type
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0003707 : Molecular Function : steroid hormone receptor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0043401 : Biological Process : steroid hormone mediated signaling pathway
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221992)
HIX0222732
HIT000676852 (
ENST00000563709
)
(Nuclear hormone receptor, ligand-binding domain containing protein.)
genome : 72,109,801 - 72,110,156 (356)
query : 1 - 356 (356/391)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.954
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 12, cyto_mito 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222732)
HIX0222187
HIT000675842 (
ENST00000562658
)
(Conserved hypothetical protein.)
genome : 72,110,737 - 72,115,677 (4,941)
query : 1 - 353 (353/353)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222187)
HIX0222187
HIT000676210 (
ENST00000563041
)
(Conserved hypothetical protein.)
genome : 72,110,755 - 72,114,796 (4,042)
query : 1 - 630 (630/630)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222187)
HIX0222187
HIT000675049 (
ENST00000561834
)
(Conserved hypothetical protein.)
genome : 72,110,831 - 72,115,725 (4,895)
query : 1 - 546 (546/546)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, cyto 13, extr 10, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222187)
HIX0012401
HIT000095664
(
BC039397
)
(Hypothetical short protein.)
genome : 72,114,640 - 72,115,963 (1,324)
query : 1 - 1,323 (1,323/1,338)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, plas 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012401)
HIX0012401
HIT000310113 (
ENST00000356056
)
(Unconventional myosin-IXa family protein.)
genome : 72,114,632 - 72,410,422 (295,791)
query : 1 - 12,409 (12,409/12,409)
42 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012401)
HIX0012401
HIT000025575
(
AL137287
)
(Unconventional myosin-IXa family protein.)
genome : 72,118,368 - 72,191,179 (72,812)
query : 1 - 4,754 (4,754/4,789)
19 exons
identity = 0.999
3'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000198 : Rho GTPase-activating protein domain
IPR002219 : Protein kinase C-like, phorbol ester/diacylglycerol-binding domain
IPR008936 : Rho GTPase activation protein
IPR028558 : Unconventional myosin-IXa
GO :
0003774 : Molecular Function : motor activity
0005096 : Molecular Function : GTPase activator activity
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
0035556 : Biological Process : intracellular signal transduction
0043547 : Biological Process : positive regulation of GTPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 16, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012401)
HIX0012401
HIT000674836 (
ENST00000561618
)
(Unconventional myosin-IXa family protein.)
genome : 72,118,362 - 72,191,179 (72,818)
query : 1 - 4,755 (4,755/4,784)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 16, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012401)
HIX0012401
HIT000203466_03 (
NM_006901
)
(Unconventional myosin-IXa family protein.)
genome : 72,118,362 - 72,410,440 (292,079)
query : 1 - 8,697 (8,697/8,722)
42 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 10
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012401)
HIX0012401
HIT000070123_03
(
AF117888
)
Representative transcript
(Unconventional myosin-IXa; Unconventional myosin-9a;)
genome : 72,118,362 - 72,410,191 (291,830)
query : 1 - 8,448 (8,448/8,473)
42 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.998;1.000;1.000;1.000;
0.991;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.995;0.983)5'
coverage = 1.000
InterPro :
IPR000048 : IQ motif, EF-hand binding site
IPR000159 : Ras-association
IPR000198 : Rho GTPase-activating protein domain
IPR001609 : Myosin head, motor domain
IPR002219 : Protein kinase C-like, phorbol ester/diacylglycerol-binding domain
IPR008936 : Rho GTPase activation protein
IPR028558 : Unconventional myosin-IXa
IPR029071 : Ubiquitin-related domain
GO :
0003774 : Molecular Function : motor activity
0005096 : Molecular Function : GTPase activator activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
0016459 : Cellular Component : myosin complex
0035556 : Biological Process : intracellular signal transduction
0043547 : Biological Process : positive regulation of GTPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012401)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB179072
Mus
sp. (Mouse) : BC068298
Gallus
sp. (Chicken) : CR385991
Bos
sp. (Cow) : ENSBTAT00000009780
Oryzias
sp. (Medaka) : ENSORLT00000002084
Oryzias
sp. (Medaka) : ENSORLT00000002087
Pongo
sp. (Orangutan) : ENSPPYT00000007799
Rattus
sp. (Rat) : ENSRNOT00000015963
Tetraodon
sp. (Tetraodon) : GSTENT00018153001
Takifugu
sp. (Fugu) : SINFRUT00000129034
Pan
sp. (Chimpanzee) : XM_001175041
Equus
sp. (Horse) : XM_001494936
Danio
sp. (Zebrafish) : XM_001921471
Danio
sp. (Zebrafish) : XM_001924008
Canis
sp. (Dog) : XM_544755
HIX0012401
HIT000409128
(
AB290183
)
(Unconventional myosin-IXa family protein.)
genome : 72,118,362 - 72,338,830 (220,469)
query : 1 - 8,132 (8,132/8,145)
41 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.999;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000048 : IQ motif, EF-hand binding site
IPR000159 : Ras-association
IPR000198 : Rho GTPase-activating protein domain
IPR001609 : Myosin head, motor domain
IPR002219 : Protein kinase C-like, phorbol ester/diacylglycerol-binding domain
IPR008936 : Rho GTPase activation protein
IPR028558 : Unconventional myosin-IXa
IPR029071 : Ubiquitin-related domain
GO :
0003774 : Molecular Function : motor activity
0005096 : Molecular Function : GTPase activator activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
0016459 : Cellular Component : myosin complex
0035556 : Biological Process : intracellular signal transduction
0043547 : Biological Process : positive regulation of GTPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25.5, cyto_nucl 15, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012401)
HIX0012401
HIT000004397
(
AK001923
)
(Conserved hypothetical protein.)
genome : 72,118,363 - 72,168,162 (49,800)
query : 1 - 2,257 (2,257/2,257)
11 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 17, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012401)
HIX0012401
HIT000522494 (
ENST00000424560
)
(Unconventional myosin-IXa family protein.)
genome : 72,118,369 - 72,410,422 (292,054)
query : 1 - 8,885 (8,885/8,885)
43 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012401)
HIX0012401
HIT000542838 (
ENST00000444904
)
(Unconventional myosin-IXa family protein.)
genome : 72,118,369 - 72,410,422 (292,054)
query : 1 - 8,615 (8,615/8,615)
41 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012401)
HIX0012401
HIT000681033 (
ENST00000568042
)
(Unconventional myosin-IXa family protein.)
genome : 72,118,390 - 72,146,753 (28,364)
query : 1 - 1,922 (1,922/1,922)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 14.5, cyto 7, plas 1, extr 1,
mito 1, pero 1, cysk 1, extr_plas 1, mito_pero 1, cysk_plas 1
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012401)
HIX0012401
HIT000501610
(
BC140869
)
(Unconventional myosin-IXa; Unconventional myosin-9a;)
genome : 72,118,613 - 72,410,109 (291,497)
query : 1 - 8,115 (8,115/8,115)
42 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.999;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000048 : IQ motif, EF-hand binding site
IPR000159 : Ras-association
IPR000198 : Rho GTPase-activating protein domain
IPR001609 : Myosin head, motor domain
IPR002219 : Protein kinase C-like, phorbol ester/diacylglycerol-binding domain
IPR008936 : Rho GTPase activation protein
IPR028558 : Unconventional myosin-IXa
IPR029071 : Ubiquitin-related domain
GO :
0003774 : Molecular Function : motor activity
0005096 : Molecular Function : GTPase activator activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
0016459 : Cellular Component : myosin complex
0035556 : Biological Process : intracellular signal transduction
0043547 : Biological Process : positive regulation of GTPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012401)
HIX0012401
HIT000503077
(
BC144683
)
(Unconventional myosin-IXa; Unconventional myosin-9a;)
genome : 72,118,613 - 72,410,109 (291,497)
query : 1 - 8,111 (8,111/8,111)
42 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.999;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000048 : IQ motif, EF-hand binding site
IPR000159 : Ras-association
IPR000198 : Rho GTPase-activating protein domain
IPR001609 : Myosin head, motor domain
IPR002219 : Protein kinase C-like, phorbol ester/diacylglycerol-binding domain
IPR008936 : Rho GTPase activation protein
IPR028558 : Unconventional myosin-IXa
IPR029071 : Ubiquitin-related domain
GO :
0003774 : Molecular Function : motor activity
0005096 : Molecular Function : GTPase activator activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0005622 : Cellular Component : intracellular
0007165 : Biological Process : signal transduction
0016459 : Cellular Component : myosin complex
0035556 : Biological Process : intracellular signal transduction
0043547 : Biological Process : positive regulation of GTPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012401)
HIX0012401
HIT000677687 (
ENST00000564571
)
(Unconventional myosin-IXa family protein.)
genome : 72,118,613 - 72,410,109 (291,497)
query : 1 - 8,111 (8,111/8,111)
42 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012401)
HIX0012401
HIT000453150
(
DQ586619
)
(Non-protein coding transcript.)
genome : 72,119,127 - 72,119,156 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012401)
HIX0012401
HIT000681459 (
ENST00000568481
)
(Rho GTPase-activating protein domain containing protein.)
genome : 72,120,275 - 72,144,528 (24,254)
query : 1 - 582 (582/582)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 9.5, cyto_mito 9, mito 7.5, plas 6, nucl 4,
extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012401)
HIX0012401
HIT000677809 (
ENST00000564699
)
(Rho GTPase-activating protein domain containing protein.)
genome : 72,122,547 - 72,144,697 (22,151)
query : 1 - 693 (693/693)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 22, cyto 8.5, cyto_nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012401)
HIX0012401
HIT000006580
(
AK023306
)
(Unconventional myosin-IXa family protein.)
genome : 72,170,379 - 72,190,475 (20,097)
query : 1 - 1,781 (1,781/1,792)
8 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.999)5'
coverage = 0.994
InterPro :
IPR028558 : Unconventional myosin-IXa
GO :
0003774 : Molecular Function : motor activity
0005096 : Molecular Function : GTPase activator activity
0035556 : Biological Process : intracellular signal transduction
0043547 : Biological Process : positive regulation of GTPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15.1667, cyto 6.5, cyto_golg 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012401)
HIX0012401
HIT000676238 (
ENST00000563071
)
(Conserved hypothetical protein.)
genome : 72,176,042 - 72,180,948 (4,907)
query : 1 - 640 (640/640)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, extr 3, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012401)
HIX0012401
HIT000676691 (
ENST00000563542
)
(Ras-association domain containing protein.)
genome : 72,181,813 - 72,338,977 (157,165)
query : 1 - 8,864 (8,864/8,864)
25 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012401)
HIX0012401
HIT000329776
(
AB209841
)
(Unconventional myosin-IXa family protein.)
genome : 72,181,813 - 72,338,830 (157,018)
query : 1 - 8,720 (8,720/8,720)
25 exons
identity = 0.999
3'(0.999;1.000;0.999;0.997;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000048 : IQ motif, EF-hand binding site
IPR000159 : Ras-association
IPR001609 : Myosin head, motor domain
IPR028558 : Unconventional myosin-IXa
IPR029071 : Ubiquitin-related domain
GO :
0003774 : Molecular Function : motor activity
0005096 : Molecular Function : GTPase activator activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0007165 : Biological Process : signal transduction
0016459 : Cellular Component : myosin complex
0035556 : Biological Process : intracellular signal transduction
0043547 : Biological Process : positive regulation of GTPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 16, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012401)
HIX0012401
HIT000681745 (
ENST00000568781
)
(Conserved hypothetical protein.)
genome : 72,185,803 - 72,190,154 (4,352)
query : 1 - 670 (670/670)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 10, cyto_nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012401)
HIX0012401
HIT000435790
(
BC150294
)
(Unconventional myosin-IXa; Unconventional myosin-9a;)
genome : 72,189,232 - 72,410,340 (221,109)
query : 2 - 5,111 (5,110/5,126)
23 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.987;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000048 : IQ motif, EF-hand binding site
IPR001609 : Myosin head, motor domain
IPR028558 : Unconventional myosin-IXa
GO :
0003774 : Molecular Function : motor activity
0005096 : Molecular Function : GTPase activator activity
0005515 : Molecular Function : protein binding
0005524 : Molecular Function : ATP binding
0016459 : Cellular Component : myosin complex
0035556 : Biological Process : intracellular signal transduction
0043547 : Biological Process : positive regulation of GTPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 12, extr 6, cyto 4.5, E.R. 2,
pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012401)
HIX0012401
HIT000679911 (
ENST00000566885
)
(Unconventional myosin-IXa family protein.)
genome : 72,189,231 - 72,410,340 (221,110)
query : 1 - 5,111 (5,111/5,111)
23 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 12.5, extr 6, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012401)
HIX0012401
HIT000679773 (
ENST00000566744
)
(Myosin head, motor domain containing protein.)
genome : 72,196,352 - 72,246,033 (49,682)
query : 1 - 539 (539/539)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 13.5, cyto 10.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012401)
HIX0012401
HIT000676792 (
ENST00000563648
)
(Conserved hypothetical protein.)
genome : 72,227,481 - 72,252,296 (24,816)
query : 1 - 754 (754/754)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 24, pero 4, nucl 2, cyto_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012401)
HIX0012401
HIT000678601 (
ENST00000565528
)
(Conserved hypothetical protein.)
genome : 72,227,784 - 72,231,352 (3,569)
query : 1 - 202 (202/202)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, nucl 7.5, E.R._mito 7.5, cyto_nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012401)
HIX0012401
HIT000680115 (
ENST00000567095
)
(Myosin head, motor domain containing protein.)
genome : 72,231,104 - 72,260,419 (29,316)
query : 1 - 456 (456/456)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 15.5, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012401)
HIX0012401
HIT000677063 (
ENST00000563925
)
(Conserved hypothetical protein.)
genome : 72,244,073 - 72,252,744 (8,672)
query : 1 - 668 (668/668)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28.5, cyto_nucl 15
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012401)
HIX0012401
HIT000243894
(
AJ001714
)
(Unconventional myosin-IXa family protein.)
genome : 72,244,115 - 72,338,977 (94,863)
query : 35 - 2,412 (2,378/2,429)
14 exons
identity = 0.994
3'(0.992;0.985;1.000;0.992;0.993;0.991;0.989;
0.992;0.990;1.000;1.000;1.000;1.000;0.995)5'
coverage = 0.979
InterPro :
IPR000159 : Ras-association
IPR001609 : Myosin head, motor domain
IPR028558 : Unconventional myosin-IXa
IPR029071 : Ubiquitin-related domain
GO :
0003774 : Molecular Function : motor activity
0005096 : Molecular Function : GTPase activator activity
0005524 : Molecular Function : ATP binding
0007165 : Biological Process : signal transduction
0016459 : Cellular Component : myosin complex
0035556 : Biological Process : intracellular signal transduction
0043547 : Biological Process : positive regulation of GTPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_plas 11.5, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012401)
HIX0012401
HIT000260188
(
BC060886
)
(Unconventional myosin-IXa; Unconventional myosin-9a;)
genome : 72,250,855 - 72,410,422 (159,568)
query : 1 - 4,030 (4,030/4,045)
14 exons
identity = 0.993
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.999;0.945)5'
coverage = 1.000
InterPro :
IPR000159 : Ras-association
IPR001609 : Myosin head, motor domain
IPR028558 : Unconventional myosin-IXa
IPR029071 : Ubiquitin-related domain
GO :
0003774 : Molecular Function : motor activity
0005096 : Molecular Function : GTPase activator activity
0005524 : Molecular Function : ATP binding
0007165 : Biological Process : signal transduction
0016459 : Cellular Component : myosin complex
0035556 : Biological Process : intracellular signal transduction
0043547 : Biological Process : positive regulation of GTPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_plas 12, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012401)
HIX0012401
HIT000680566 (
ENST00000567560
)
(Unconventional myosin-IXa family protein.)
genome : 72,250,841 - 72,410,422 (159,582)
query : 1 - 4,056 (4,056/4,056)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_plas 12, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012401)
HIX0222807
HIT000681370 (
ENST00000568391
)
(Conserved hypothetical protein.)
genome : 72,264,547 - 72,332,606 (68,060)
query : 1 - 781 (781/781)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 13.5, nucl 11.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222807)
HIX0012401
HIT000341101
(
DQ088983
)
(Unconventional myosin-IXa family protein.)
genome : 72,300,212 - 72,324,897 (24,686)
query : 1 - 463 (463/463)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001609 : Myosin head, motor domain
IPR028558 : Unconventional myosin-IXa
GO :
0003774 : Molecular Function : motor activity
0005096 : Molecular Function : GTPase activator activity
0005524 : Molecular Function : ATP binding
0016459 : Cellular Component : myosin complex
0035556 : Biological Process : intracellular signal transduction
0043547 : Biological Process : positive regulation of GTPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 16.5, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012401)
HIX0012401
HIT000341102
(
DQ088984
)
(Unconventional myosin-IXa family protein.)
genome : 72,300,212 - 72,324,897 (24,686)
query : 1 - 406 (406/406)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001609 : Myosin head, motor domain
IPR028558 : Unconventional myosin-IXa
GO :
0003774 : Molecular Function : motor activity
0005096 : Molecular Function : GTPase activator activity
0005524 : Molecular Function : ATP binding
0016459 : Cellular Component : myosin complex
0035556 : Biological Process : intracellular signal transduction
0043547 : Biological Process : positive regulation of GTPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 17.5, nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012401)
HIX0012401
HIT000681417 (
ENST00000568438
)
(Myosin head, motor domain containing protein.)
genome : 72,302,719 - 72,338,323 (35,605)
query : 1 - 549 (549/549)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 16.5, extr 11, cyto_nucl 9.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012401)
HIX0012401
HIT000192791
(
L29148
)
(Unconventional myosin-IXa family protein.)
genome : 72,320,104 - 72,338,205 (18,102)
query : 1 - 267 (267/267)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001609 : Myosin head, motor domain
IPR028558 : Unconventional myosin-IXa
GO :
0003774 : Molecular Function : motor activity
0005096 : Molecular Function : GTPase activator activity
0005524 : Molecular Function : ATP binding
0016459 : Cellular Component : myosin complex
0035556 : Biological Process : intracellular signal transduction
0043547 : Biological Process : positive regulation of GTPase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13, mito 3, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012401)
HIX0222735
HIT000677163 (
ENST00000564027
)
(Translation elongation factor IF5A family protein.)
genome : 72,333,535 - 72,333,994 (460)
query : 1 - 460 (460/460)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 8.5, extr_plas 8.5, cyto_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222735)
HIX0012401
HIT000682258 (
ENST00000569314
)
(Unconventional myosin-IXa family protein.)
genome : 72,338,483 - 72,410,564 (72,082)
query : 1 - 560 (560/560)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 17.6667, cyto_plas 11.3333, nucl 7,
extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012401)
HIX0012401
HIT000678030 (
ENST00000564931
)
(Unconventional myosin-IXa family protein.)
genome : 72,338,685 - 72,410,918 (72,234)
query : 1 - 564 (564/564)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, extr 11, cyto 11, cyto_plas 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012401)
HIX0012402
HIT000654331 (
NM_001166340
)
(Peptidase C48, SUMO/Sentrin/Ubl1 family protein.)
genome : 72,406,599 - 72,433,311 (26,713)
query : 1 - 1,680 (1,680/1,680)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.22.68
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 12, nucl 8, extr 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012402)
HIX0012402
HIT000022411
(
AK097557
)
(Sentrin-specific protease 8; EC=3.4.22.68; Deneddylase-1; NEDD8-specific protease 1; Protease, cysteine 2; Sentrin/SUMO-specific protease SENP8;)
genome : 72,406,599 - 72,433,303 (26,705)
query : 1 - 1,672 (1,672/1,672)
2 exons
identity = 0.998
5'(1.000;0.997)3'
coverage = 1.000
EC number :
EC 3.4.22.68
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, cyto_nucl 9, cysk 9, nucl 6.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012402)
HIX0012402
HIT000641080 (
ENST00000542035
)
(Peptidase C48, SUMO/Sentrin/Ubl1 family protein.)
genome : 72,406,599 - 72,433,303 (26,705)
query : 1 - 1,672 (1,672/1,672)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 12, nucl 8, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012402)
HIX0012402
HIT000643456 (
ENST00000544411
)
(Peptidase C48, SUMO/Sentrin/Ubl1 family protein.)
genome : 72,409,192 - 72,433,311 (24,120)
query : 1 - 1,834 (1,834/1,834)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012402)
HIX0012402
HIT000654877 (
NM_001172109
)
(Peptidase C48, SUMO/Sentrin/Ubl1 family protein.)
genome : 72,409,192 - 72,433,311 (24,120)
query : 1 - 1,834 (1,834/1,834)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.22.68
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012402)
HIX0012402
HIT000680792 (
ENST00000567794
)
(Conserved hypothetical protein.)
genome : 72,409,192 - 72,432,076 (22,885)
query : 1 - 599 (599/599)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 3, mito 3, cyto_mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012402)
HIX0012402
HIT000654878 (
NM_001172110
)
(Peptidase C48, SUMO/Sentrin/Ubl1 family protein.)
genome : 72,409,246 - 72,433,311 (24,066)
query : 1 - 1,676 (1,676/1,676)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.22.68
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012402)
HIX0012402
HIT000677966 (
ENST00000564863
)
(Conserved hypothetical protein.)
genome : 72,409,246 - 72,432,185 (22,940)
query : 1 - 550 (550/550)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 15, cyto 5.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012402)
HIX0012402
HIT000425095
(
AK292298
)
(Sentrin-specific protease 8; EC=3.4.22.68; Deneddylase-1; NEDD8-specific protease 1; Protease, cysteine 2; Sentrin/SUMO-specific protease SENP8;)
genome : 72,410,631 - 72,433,084 (22,454)
query : 3 - 1,344 (1,342/1,344)
2 exons
identity = 0.999
5'(1.000;0.998)3'
coverage = 0.999
EC number :
EC 3.4.22.68
InterPro :
IPR003653 : Peptidase C48, SUMO/Sentrin/Ubl1
GO :
0006508 : Biological Process : proteolysis
0008234 : Molecular Function : cysteine-type peptidase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 13.5, nucl 8, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012402)
HIX0012402
HIT000213130 (
NM_145204
)
(Peptidase C48, SUMO/Sentrin/Ubl1 family protein.)
genome : 72,410,631 - 72,433,311 (22,681)
query : 1 - 1,569 (1,569/1,569)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.22.68
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 12, nucl 8, extr 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012402)
HIX0012402
HIT000654879 (
NM_001172111
)
(Peptidase C48, SUMO/Sentrin/Ubl1 family protein.)
genome : 72,410,631 - 72,433,311 (22,681)
query : 1 - 1,693 (1,693/1,693)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.4.22.68
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012402)
HIX0012402
HIT000133542 (
ENST00000340912
)
(Peptidase C48, SUMO/Sentrin/Ubl1 family protein.)
genome : 72,410,637 - 72,433,304 (22,668)
query : 1 - 1,556 (1,556/1,556)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 12, nucl 8, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012402)
HIX0012402
HIT000643216 (
ENST00000544171
)
(Peptidase C48, SUMO/Sentrin/Ubl1 family protein.)
genome : 72,410,643 - 72,433,311 (22,669)
query : 1 - 1,681 (1,681/1,681)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012402)
HIX0012401
pHIT000025385 ( pHIT000025385 )
(Hypothetical protein.)
genome : 72,410,647 - 72,410,928 (282)
query : 1 - 282 (282/282)
1 exon
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012401)
CAGE tag :
H04BA65L1102
HIX0012402
HIT000083134
(
AY008293
)
Representative transcript
(Sentrin-specific protease 8; EC=3.4.22.68; Deneddylase-1; NEDD8-specific protease 1; Protease, cysteine 2; Sentrin/SUMO-specific protease SENP8;)
genome : 72,410,665 - 72,432,966 (22,302)
query : 1 - 1,188 (1,188/1,188)
2 exons
identity = 0.997
5'(0.972;1.000)3'
coverage = 1.000
EC number :
EC 3.4.22.68
InterPro :
IPR003653 : Peptidase C48, SUMO/Sentrin/Ubl1
GO :
0006508 : Biological Process : proteolysis
0008234 : Molecular Function : cysteine-type peptidase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 12, nucl 8, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012402)
HIX0012402
HIT000677217 (
ENST00000564082
)
(Peptidase C48, SUMO/Sentrin/Ubl1 family protein.)
genome : 72,410,666 - 72,432,356 (21,691)
query : 1 - 703 (703/703)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012402)
HIX0012402
HIT000076929
(
AF308450
)
(Sentrin-specific protease 8; EC=3.4.22.68; Deneddylase-1; NEDD8-specific protease 1; Protease, cysteine 2; Sentrin/SUMO-specific protease SENP8;)
genome : 72,410,725 - 72,432,950 (22,226)
query : 1 - 1,112 (1,112/1,112)
2 exons
identity = 0.996
5'(0.951;0.999)3'
coverage = 1.000
EC number :
EC 3.4.22.68
InterPro :
IPR003653 : Peptidase C48, SUMO/Sentrin/Ubl1
GO :
0006508 : Biological Process : proteolysis
0008234 : Molecular Function : cysteine-type peptidase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, cysk 6, cyto_pero 6, cyto_plas 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012402)
HIX0012402
HIT000041295
(
BC031411
)
(Sentrin-specific protease 8; EC=3.4.22.68; Deneddylase-1; NEDD8-specific protease 1; Protease, cysteine 2; Sentrin/SUMO-specific protease SENP8;)
genome : 72,410,754 - 72,433,304 (22,551)
query : 1 - 1,439 (1,439/1,485)
2 exons
identity = 0.999
5'(1.000;0.999)3'
coverage = 1.000
EC number :
EC 3.4.22.68
InterPro :
IPR003653 : Peptidase C48, SUMO/Sentrin/Ubl1
GO :
0006508 : Biological Process : proteolysis
0008234 : Molecular Function : cysteine-type peptidase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 12, nucl 8, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012402)
HIX0211905
HIT000582851 (
ENST00000478757
)
(Ribosomal protein L21e family protein.)
genome : 72,426,982 - 72,427,777 (796)
query : 1 - 796 (796/796)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10, nucl 9.5, cyto_nucl 9.5, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211905)
HIX0222814
HIT000681939 (
ENST00000568984
)
(Hypothetical short protein.)
genome : 72,432,845 - 72,447,800 (14,956)
query : 1 - 393 (393/393)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222814)
HIX0012403
HIT000090973
(
BC024783
)
Representative transcript
(GRAM domain-containing protein 2.)
genome : 72,452,149 - 72,457,739 (5,591)
query : 1 - 2,712 (2,712/2,731)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 11, nucl 8, cyto_pero 8, plas 6, cyto_mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012403)
HIX0012403
HIT000033618
(
BC008057
)
(Conserved hypothetical protein.)
genome : 72,452,147 - 72,454,008 (1,862)
query : 1 - 1,863 (1,863/1,880)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, extr 7, cyto 4.5, cyto_nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012403)
HIX0012403
HIT000004490
(
AK002016
)
(Conserved hypothetical protein.)
genome : 72,452,148 - 72,454,146 (1,999)
query : 1 - 1,997 (1,997/1,997)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, extr 11, cyto 4, cyto_nucl 3.83333,
cyto_pero 2.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012403)
HIX0012403
HIT000680666 (
ENST00000567662
)
(Conserved hypothetical protein.)
genome : 72,452,149 - 72,456,174 (4,026)
query : 1 - 2,878 (2,878/2,878)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 14, plas 7.5, E.R._mito 7.5, extr_plas 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012403)
HIX0012403
HIT000021356
(
AK096501
)
(GRAM domain-containing protein 2.)
genome : 72,452,149 - 72,456,105 (3,957)
query : 1 - 2,808 (2,808/2,808)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 14, plas 7.5, E.R._mito 7.5, extr_plas 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012403)
HIX0012403
HIT000498348
(
AK303724
)
(GRAM domain-containing protein 2.)
genome : 72,453,823 - 72,456,130 (2,308)
query : 1 - 1,024 (1,024/1,024)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 8.5, cyto 8, mito_pero 6.83333, extr_plas 6,
E.R._mito 6, mito 5.5, pero 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012403)
HIX0012403
HIT000678321 (
ENST00000565233
)
(Conserved hypothetical protein.)
genome : 72,453,823 - 72,456,130 (2,308)
query : 1 - 1,024 (1,024/1,024)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 8.5, cyto 8, mito_pero 6.83333, extr_plas 6,
E.R._mito 6, mito 5.5, pero 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012403)
HIX0012403
HIT000680050 (
ENST00000567029
)
(Conserved hypothetical protein.)
genome : 72,454,168 - 72,456,196 (2,029)
query : 1 - 594 (594/594)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11.5, extr_plas 7.5, mito_pero 6.33333, pero 6,
E.R._mito 5.16667, cyto 5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012403)
HIX0012403
HIT000677878 (
ENST00000564773
)
(Conserved hypothetical protein.)
genome : 72,454,249 - 72,456,209 (1,961)
query : 1 - 564 (564/564)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 18, plas 4, extr 4, extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012403)
HIX0012403
HIT000677316 (
ENST00000564184
)
(Conserved hypothetical protein.)
genome : 72,455,101 - 72,459,043 (3,943)
query : 1 - 601 (601/601)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 14.3333, cyto 5, cyto_pero 4,
extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012403)
HIX0012403
HIT000677262 (
ENST00000564129
)
(GRAM domain containing protein.)
genome : 72,456,036 - 72,462,720 (6,685)
query : 1 - 664 (664/664)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 12, mito 5, cyto 2.5,
E.R._mito 2.5, mito_pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012403)
HIX0012403
HIT000681568 (
ENST00000568594
)
(GRAM domain containing protein.)
genome : 72,458,987 - 72,462,415 (3,429)
query : 1 - 623 (623/623)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, nucl 14.5, cyto 11.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012403)
HIX0012403
HIT000680641 (
ENST00000567637
)
(GRAM domain containing protein.)
genome : 72,459,020 - 72,461,484 (2,465)
query : 1 - 509 (509/509)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 12.5, extr 7, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012403)
HIX0012403
HIT000683183 (
ENST00000570275
)
(GRAM domain containing protein.)
genome : 72,459,335 - 72,462,676 (3,342)
query : 1 - 556 (556/556)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, nucl 10.5, cyto_nucl 9, mito 5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012403)
HIX0012403
HIT000675493 (
ENST00000562288
)
(Conserved hypothetical protein.)
genome : 72,460,150 - 72,462,652 (2,503)
query : 1 - 507 (507/507)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 6, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012403)
HIX0012403
HIT000676298 (
ENST00000563133
)
(Conserved hypothetical protein.)
genome : 72,461,603 - 72,468,439 (6,837)
query : 1 - 591 (591/591)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012403)
HIX0012403
HIT000682392 (
ENST00000569450
)
(Conserved hypothetical protein.)
genome : 72,465,906 - 72,468,903 (2,998)
query : 1 - 513 (513/513)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, nucl 5, cyto 2, golg 2, cyto_golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012403)
HIX0221983
HIT000057244
(
BX648597
)
Representative transcript
(Pyruvate kinase family protein.)
genome : 72,491,374 - 72,494,394 (3,021)
query : 1 - 2,305 (2,305/2,325)
2 exons
identity = 0.999
3'(0.997;0.999)5'
coverage = 1.000
InterPro :
IPR001697 : Pyruvate kinase
IPR015794 : Pyruvate kinase, alpha/beta
IPR015795 : Pyruvate kinase, C-terminal
GO :
0000287 : Molecular Function : magnesium ion binding
0004743 : Molecular Function : pyruvate kinase activity
0006096 : Biological Process : glycolytic process
0030955 : Molecular Function : potassium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27.5, cyto_mito 16
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221983)
HIX0221983
HIT000678233 (
ENST00000565143
)
(Pyruvate kinase family protein.)
genome : 72,491,377 - 72,494,394 (3,018)
query : 1 - 2,301 (2,301/2,301)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 27.5, cyto_mito 16
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221983)
HIX0221983
HIT000622417_02 (
ENST00000523134
)
(Pyruvate kinase family protein.)
genome : 72,491,994 - 72,492,999 (1,006)
query : 18 - 306 (289/306)
2 exons
identity = 0.955
3'(0.952;0.957)5'
coverage = 0.944
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 10.5, extr 10, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221983)
HIX0222017
HIT000683076 (
ENST00000570166
)
(Pyruvate kinase family protein.)
genome : 72,495,031 - 72,499,195 (4,165)
query : 1 - 626 (626/626)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.8333, extr 11, cyto 9.5, nucl 8,
cyto_pero 6.16667, mito_nucl 6.16667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222017)
HIX0222017
HIT000678091 (
ENST00000564993
)
(Pyruvate kinase family protein.)
genome : 72,498,600 - 72,499,508 (909)
query : 1 - 663 (663/663)
2 exons
identity = 0.994
3'(1.000;0.911)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222017)
HIX0222017
HIT000676436 (
ENST00000563275
)
(Pyruvate kinase family protein.)
genome : 72,499,016 - 72,501,303 (2,288)
query : 1 - 699 (699/699)
3 exons
identity = 0.989
3'(1.000;0.974;0.988)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, mito 14, cyto_nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222017)
HIX0222017
HIT000327094
(
Z36786
)
(Pyruvate kinase family protein.)
genome : 72,499,172 - 72,501,018 (1,847)
query : 1 - 258 (258/260)
3 exons
identity = 0.955
3'(0.960;0.961;0.934)5'
coverage = 0.992
InterPro :
IPR001697 : Pyruvate kinase
IPR015793 : Pyruvate kinase, barrel
IPR015813 : Pyruvate/Phosphoenolpyruvate kinase-like domain
IPR018209 : Pyruvate kinase, active site
GO :
0000287 : Molecular Function : magnesium ion binding
0003824 : Molecular Function : catalytic activity
0004743 : Molecular Function : pyruvate kinase activity
0006096 : Biological Process : glycolytic process
0030955 : Molecular Function : potassium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 9, cyto_nucl 6.5, extr 5, nucl 2,
pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222017)
HIX0222017
HIT000681710 (
ENST00000568743
)
(Pyruvate kinase, barrel domain containing protein.)
genome : 72,501,007 - 72,502,367 (1,361)
query : 1 - 580 (580/580)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, mito 3, extr 2, nucl 2, mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222017)
HIX0222017
HIT000675962 (
ENST00000562784
)
(Pyruvate kinase, barrel domain containing protein.)
genome : 72,501,847 - 72,509,792 (7,946)
query : 1 - 529 (529/529)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 12, extr 6, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222017)
HIX0222017
HIT000677310 (
ENST00000564178
)
(Pyruvate kinase, barrel domain containing protein.)
genome : 72,502,074 - 72,511,766 (9,693)
query : 1 - 554 (554/554)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16.8333, cyto_plas 10.1667,
nucl 8, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222017)
HIX0222017
HIT000676168 (
ENST00000562997
)
(Pyruvate kinase family protein.)
genome : 72,502,092 - 72,514,872 (12,781)
query : 1 - 582 (582/582)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 17, cyto_plas 13.1667, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222017)
HIX0222017
HIT000680107 (
ENST00000567087
)
(Pyruvate kinase family protein.)
genome : 72,502,124 - 72,524,021 (21,898)
query : 1 - 550 (550/550)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 19.6667, cyto_plas 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222017)
HIX0222017
HIT000677404 (
ENST00000564276
)
(Pyruvate kinase family protein.)
genome : 72,502,401 - 72,523,531 (21,131)
query : 1 - 753 (753/753)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, cyto 15.5, nucl 8.5, extr 3, mito 2,
cysk 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222017)
HIX0222017
HIT000327139
(
Z36831
)
Representative transcript
(Pyruvate kinase family protein.)
genome : 72,502,750 - 72,523,545 (20,796)
query : 12 - 443 (432/443)
4 exons
identity = 0.961
3'(0.986;1.000;0.918;0.989)5'
coverage = 0.975
InterPro :
IPR001697 : Pyruvate kinase
IPR015793 : Pyruvate kinase, barrel
IPR015813 : Pyruvate/Phosphoenolpyruvate kinase-like domain
GO :
0000287 : Molecular Function : magnesium ion binding
0003824 : Molecular Function : catalytic activity
0004743 : Molecular Function : pyruvate kinase activity
0006096 : Biological Process : glycolytic process
0030955 : Molecular Function : potassium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 19, cyto 15, nucl 11, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222017)
HIX0222017
HIT000679836 (
ENST00000566809
)
(Pyruvate kinase family protein.)
genome : 72,509,750 - 72,523,965 (14,216)
query : 1 - 560 (560/560)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, cyto 13, extr 8, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222017)
HIX0222017
HIT000682000 (
ENST00000569050
)
(Conserved hypothetical protein.)
genome : 72,511,284 - 72,524,160 (12,877)
query : 1 - 457 (457/457)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, mito 6, cyto_nucl 3.33333, mito_pero 3.33333,
cyto 3, E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222017)
HIX0221945
HIT000016039
(
AK091172
)
Representative transcript
(Conserved hypothetical protein.)
genome : 72,533,559 - 72,538,128 (4,570)
query : 1 - 3,657 (3,657/3,657)
4 exons
identity = 0.999
3'(1.000;1.000;1.000;0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 9, cyto_nucl 8.5, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221945)
HIX0221945
HIT000680012 (
ENST00000566991
)
(Conserved hypothetical protein.)
genome : 72,533,559 - 72,538,128 (4,570)
query : 1 - 3,657 (3,657/3,657)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 9, cyto_nucl 8.5, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221945)
HIX0222801
HIT000681198 (
ENST00000568213
)
(Poly(ADP-ribose) polymerase, catalytic domain containing protein.)
genome : 72,541,469 - 72,542,789 (1,321)
query : 1 - 616 (616/616)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, nucl 11.5, cyto 8.5, mito 7, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222801)
HIX0222223
HIT000679870 (
ENST00000566844
)
(Hypothetical protein.)
genome : 72,559,088 - 72,564,912 (5,825)
query : 1 - 829 (829/829)
4 exons
identity = 0.996
3'(1.000;1.000;1.000;0.990)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222223)
HIX0222223
HIT000680637 (
ENST00000567633
)
(Non-protein coding transcript.)
genome : 72,559,973 - 72,564,839 (4,867)
query : 1 - 405 (405/405)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222223)
HIX0038336
HIT000093427
(
BC034424
)
Representative transcript
(Beta-hexosaminidase subunit alpha; EC=3.2.1.52; Beta-N-acetylhexosaminidase subunit alpha; Hexosaminidase subunit A; N-acetyl-beta-glucosaminidase subunit alpha; Precursor;)
genome : 72,571,208 - 72,644,134 (72,927)
query : 2 - 3,148 (3,147/3,163)
3 exons
identity = 0.998
5'(1.000;0.997;0.999)3'
coverage = 1.000
EC number :
EC 3.2.1.52
KEGG pathway :
00511 : Other glycan degradation (9)
00513 : Various types of N-glycan biosynthesis (22)
00520 : Amino sugar and nucleotide sugar metabolism (92)
00531 : Glycosaminoglycan degradation (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
00604 : Glycosphingolipid biosynthesis - ganglio series (8)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 10.5, cyto_nucl 9.16667, cyto 6.5,
cyto_pero 4.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038336)
HIX0038336
HIT000683085 (
ENST00000570175
)
(Beta-hexosaminidase subunit alpha; EC=3.2.1.52; Beta-N-acetylhexosaminidase subunit alpha; Hexosaminidase subunit A; N-acetyl-beta-glucosaminidase subunit alpha; Precursor;)
genome : 72,571,208 - 72,644,135 (72,928)
query : 1 - 3,148 (3,148/3,148)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 3.2.1.52
KEGG pathway :
00511 : Other glycan degradation (9)
00513 : Various types of N-glycan biosynthesis (22)
00520 : Amino sugar and nucleotide sugar metabolism (92)
00531 : Glycosaminoglycan degradation (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
00604 : Glycosphingolipid biosynthesis - ganglio series (8)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 10.5, cyto_nucl 9.16667, cyto 6.5,
cyto_pero 4.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038336)
HIX0012406
HIT000211471 (
NM_052840
)
(CUGBP Elav-like family member 6; CELF-6; Bruno-like protein 6; CUG-BP- and ETR-3-like factor 6; RNA-binding protein BRUNOL-6;)
genome : 72,577,068 - 72,612,525 (35,458)
query : 1 - 3,400 (3,400/3,418)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, cyto_nucl 9.5, nucl 6, mito_pero 4.83333,
E.R._mito 4.16667, pero 4, mito 3.5, E.R. 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012406)
HIX0012406
HIT000050369
(
AK131098
)
(CUGBP Elav-like family member 6; CELF-6; Bruno-like protein 6; CUG-BP- and ETR-3-like factor 6; RNA-binding protein BRUNOL-6;)
genome : 72,577,068 - 72,613,529 (36,462)
query : 1 - 4,440 (4,440/4,440)
16 exons
identity = 0.997
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.993)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 11, pero 8, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012406)
HIX0012406
HIT000112829 (
ENST00000287202
)
(CUGBP Elav-like family member 6; CELF-6; Bruno-like protein 6; CUG-BP- and ETR-3-like factor 6; RNA-binding protein BRUNOL-6;)
genome : 72,577,068 - 72,612,470 (35,403)
query : 1 - 3,345 (3,345/3,345)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, cyto_nucl 9.5, nucl 6, mito_pero 4.83333,
E.R._mito 4.16667, pero 4, mito 3.5, E.R. 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012406)
HIX0012406
HIT000654981 (
NM_001172684
)
(CUGBP Elav-like family member 6; CELF-6; Bruno-like protein 6; CUG-BP- and ETR-3-like factor 6; RNA-binding protein BRUNOL-6;)
genome : 72,577,068 - 72,612,287 (35,220)
query : 1 - 3,081 (3,081/3,081)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, cyto_nucl 9.5, nucl 6, mito_pero 5.33333,
mito 4.5, E.R._mito 4.16667, pero 4, E.R. 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012406)
HIX0012406
HIT000654982 (
NM_001172685
)
(CUGBP Elav-like family member 6 isoform 3.)
genome : 72,577,068 - 72,598,656 (21,589)
query : 1 - 2,854 (2,854/2,854)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 13.5, nucl 10.5, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012406)
HIX0012406
HIT000478644 (
ENST00000395258
)
(CUGBP Elav-like family member 6; CELF-6; Bruno-like protein 6; CUG-BP- and ETR-3-like factor 6; RNA-binding protein BRUNOL-6;)
genome : 72,577,068 - 72,584,593 (7,526)
query : 1 - 2,751 (2,751/2,751)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 11, pero 8, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012406)
HIX0012406
HIT000041165
(
BC030835
)
(CUGBP Elav-like family member 6; CELF-6; Bruno-like protein 6; CUG-BP- and ETR-3-like factor 6; RNA-binding protein BRUNOL-6;)
genome : 72,577,379 - 72,612,228 (34,850)
query : 1 - 2,791 (2,791/2,826)
13 exons
identity = 0.999
3'(0.998;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.996)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 10.5, nucl 6, pero 6,
mito_pero 5.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012406)
HIX0012406
HIT000044731
(
AK124858
)
(CUGBP Elav-like family member 6; CELF-6; Bruno-like protein 6; CUG-BP- and ETR-3-like factor 6; RNA-binding protein BRUNOL-6;)
genome : 72,577,525 - 72,612,128 (34,604)
query : 1 - 2,497 (2,497/2,497)
12 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012406)
HIX0012406
HIT000535806 (
ENST00000437872
)
(CUGBP Elav-like family member 6; CELF-6; Bruno-like protein 6; CUG-BP- and ETR-3-like factor 6; RNA-binding protein BRUNOL-6;)
genome : 72,577,525 - 72,612,128 (34,604)
query : 1 - 2,497 (2,497/2,497)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012406)
HIX0012406
HIT000638680 (
ENST00000539635
)
(CUGBP Elav-like family member 6; CELF-6; Bruno-like protein 6; CUG-BP- and ETR-3-like factor 6; RNA-binding protein BRUNOL-6;)
genome : 72,577,525 - 72,612,128 (34,604)
query : 1 - 2,497 (2,497/2,497)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012406)
HIX0012406
HIT000489006
(
AK294382
)
(CUGBP Elav-like family member 6 isoform 3.)
genome : 72,578,246 - 72,598,656 (20,411)
query : 1 - 1,677 (1,677/1,677)
11 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.994)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 13.5, nucl 10.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012406)
HIX0012406
HIT000642809 (
ENST00000543764
)
(CUGBP Elav-like family member 6 isoform 3.)
genome : 72,578,246 - 72,598,656 (20,411)
query : 1 - 1,676 (1,676/1,676)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 13.5, nucl 10.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012406)
HIX0012406
HIT000051145
(
BC033838
)
(CUGBP Elav-like family member 6; CELF-6; Bruno-like protein 6; CUG-BP- and ETR-3-like factor 6; RNA-binding protein BRUNOL-6;)
genome : 72,578,307 - 72,598,633 (20,327)
query : 40 - 1,765 (1,726/1,780)
13 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.993)5'
coverage = 0.978
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 11, pero 8, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012406)
HIX0012406
HIT000079106
(
AF401233
)
Representative transcript
(CUGBP Elav-like family member 6; CELF-6; Bruno-like protein 6; CUG-BP- and ETR-3-like factor 6; RNA-binding protein BRUNOL-6;)
genome : 72,578,294 - 72,612,470 (34,177)
query : 1 - 2,119 (2,119/2,120)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, cyto_nucl 9.5, nucl 6, mito_pero 4.83333,
E.R._mito 4.16667, pero 4, mito 3.5, E.R. 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012406)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB169218
Mus
sp. (Mouse) : BC052406
Tetraodon
sp. (Tetraodon) : CR698110
Gallus
sp. (Chicken) : EF520347
Oryzias
sp. (Medaka) : ENSORLT00000005784
Pongo
sp. (Orangutan) : ENSPPYT00000007807
Takifugu
sp. (Fugu) : SINFRUT00000141224
Danio
sp. (Zebrafish) : XM_001334944
Danio
sp. (Zebrafish) : XM_001335280
Monodelphis
sp. (Opossum) : XM_001371189
Rattus
sp. (Rat) : XM_236307
Bos
sp. (Cow) : XM_585599
Canis
sp. (Dog) : XM_848961
Pan
sp. (Chimpanzee) : XR_021902
HIX0012406
HIT000079437
(
AF425606
)
(CUGBP Elav-like family member 6; CELF-6; Bruno-like protein 6; CUG-BP- and ETR-3-like factor 6; RNA-binding protein BRUNOL-6;)
genome : 72,578,342 - 72,612,286 (33,945)
query : 1 - 1,887 (1,887/1,887)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, cyto_nucl 9.5, nucl 6, mito_pero 4.83333,
E.R._mito 4.16667, pero 4, mito 3.5, E.R. 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012406)
HIX0012406
HIT000490628
(
AK296004
)
(CUGBP Elav-like family member 6; CELF-6; Bruno-like protein 6; CUG-BP- and ETR-3-like factor 6; RNA-binding protein BRUNOL-6;)
genome : 72,578,589 - 72,612,223 (33,635)
query : 1 - 1,496 (1,496/1,496)
12 exons
identity = 0.999
3'(1.000;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, cyto_nucl 9.5, nucl 6, mito_pero 5.33333,
mito 4.5, E.R._mito 4.16667, pero 4, E.R. 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012406)
HIX0012406
HIT000680103 (
ENST00000567083
)
(CUGBP Elav-like family member 6; CELF-6; Bruno-like protein 6; CUG-BP- and ETR-3-like factor 6; RNA-binding protein BRUNOL-6;)
genome : 72,578,589 - 72,612,223 (33,635)
query : 1 - 1,496 (1,496/1,496)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, cyto_nucl 9.5, nucl 6, mito_pero 5.33333,
mito 4.5, E.R._mito 4.16667, pero 4, E.R. 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012406)
HIX0012406
HIT000682255 (
ENST00000569311
)
(CUGBP Elav-like family member 6; CELF-6; Bruno-like protein 6; CUG-BP- and ETR-3-like factor 6; RNA-binding protein BRUNOL-6;)
genome : 72,581,970 - 72,598,656 (16,687)
query : 1 - 643 (643/643)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 13, cyto 11, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012406)
HIX0021495
HIT000016789
(
AK091922
)
Representative transcript
(Conserved hypothetical protein.)
genome : 72,616,416 - 72,618,431 (2,016)
query : 1 - 1,992 (1,992/1,992)
1 exon
identity = 0.980
3'(0.980)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 8, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021495)
HIX0222255
HIT000067507
(
AF087959
)
Representative transcript
(Conserved hypothetical protein.)
genome : 72,629,148 - 72,635,786 (6,639)
query : 1 - 538 (538/547)
2 exons
identity = 0.991
3'(0.990;0.992)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222255)
HIX0012407
HIT000258964
(
BC021030
)
(Beta-hexosaminidase subunit alpha; EC=3.2.1.52; Beta-N-acetylhexosaminidase subunit alpha; Hexosaminidase subunit A; N-acetyl-beta-glucosaminidase subunit alpha; Precursor;)
genome : 72,636,198 - 72,642,992 (6,795)
query : 12 - 1,150 (1,139/1,186)
8 exons
identity = 0.998
3'(1.000;0.990;1.000;0.995;1.000;1.000;1.000;
1.000)5'
coverage = 0.967
EC number :
EC 3.2.1.52
KEGG pathway :
00511 : Other glycan degradation (9)
00513 : Various types of N-glycan biosynthesis (22)
00520 : Amino sugar and nucleotide sugar metabolism (92)
00531 : Glycosaminoglycan degradation (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
00604 : Glycosphingolipid biosynthesis - ganglio series (8)
01100 : Metabolic pathways (1346)
InterPro :
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015883 : Glycoside hydrolase family 20, catalytic core
IPR017853 : Glycoside hydrolase superfamily
IPR025705 : Beta-hexosaminidase
GO :
0004553 : Molecular Function : hydrolase activity, hydrolyzing O-glycosyl compounds
0004563 : Molecular Function : beta-N-acetylhexosaminidase activity
0005975 : Biological Process : carbohydrate metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 17, nucl 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012407)
HIX0012407
HIT000678930 (
ENST00000565873
)
(Glycoside hydrolase superfamily domain containing protein.)
genome : 72,636,207 - 72,638,223 (2,017)
query : 1 - 712 (712/721)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto_nucl 6.5, cyto 5.5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012407)
HIX0012407
HIT000085962
(
BC001138
)
Representative transcript
(Beta-hexosaminidase family protein.)
genome : 72,636,228 - 72,647,952 (11,725)
query : 1 - 1,421 (1,421/1,440)
12 exons
identity = 0.998
3'(1.000;0.990;1.000;0.989;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015883 : Glycoside hydrolase family 20, catalytic core
IPR017853 : Glycoside hydrolase superfamily
IPR025705 : Beta-hexosaminidase
IPR029018 : Chitobiase/beta-hexosaminidase domain 2-like
GO :
0004553 : Molecular Function : hydrolase activity, hydrolyzing O-glycosyl compounds
0004563 : Molecular Function : beta-N-acetylhexosaminidase activity
0005975 : Biological Process : carbohydrate metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10, nucl 9, cyto_nucl 9, cyto 7, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012407)
HIX0012407
HIT000677788 (
ENST00000564677
)
(Glycoside hydrolase superfamily domain containing protein.)
genome : 72,636,228 - 72,638,230 (2,003)
query : 1 - 572 (572/572)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 6.5, cyto_nucl 5.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012407)
HIX0012407
HIT000054773
(
BX537989
)
(Beta-hexosaminidase subunit alpha; EC=3.2.1.52; Beta-N-acetylhexosaminidase subunit alpha; Hexosaminidase subunit A; N-acetyl-beta-glucosaminidase subunit alpha; Precursor;)
genome : 72,637,577 - 72,652,794 (15,218)
query : 1 - 6,879 (6,879/6,897)
11 exons
identity = 0.997
3'(0.994;1.000;1.000;1.000;0.994;1.000;1.000;
1.000;0.995;0.998;0.999)5'
coverage = 1.000
EC number :
EC 3.2.1.52
KEGG pathway :
00511 : Other glycan degradation (9)
00513 : Various types of N-glycan biosynthesis (22)
00520 : Amino sugar and nucleotide sugar metabolism (92)
00531 : Glycosaminoglycan degradation (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
00604 : Glycosphingolipid biosynthesis - ganglio series (8)
01100 : Metabolic pathways (1346)
InterPro :
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015883 : Glycoside hydrolase family 20, catalytic core
IPR017853 : Glycoside hydrolase superfamily
GO :
0004553 : Molecular Function : hydrolase activity, hydrolyzing O-glycosyl compounds
0005975 : Biological Process : carbohydrate metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 16.5, nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012407)
HIX0012407
HIT000191252
(
J04178
)
(Conserved hypothetical protein.)
genome : 72,637,571 - 72,638,662 (1,092)
query : 1 - 1,092 (1,092/1,092)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 7.5, cyto_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012407)
HIX0012407
HIT000682064 (
ENST00000569116
)
(Conserved hypothetical protein.)
genome : 72,637,571 - 72,638,145 (575)
query : 1 - 449 (449/449)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012407)
HIX0012407
HIT000681742 (
ENST00000568777
)
(Glycoside hydrolase family 20, catalytic core domain containing protein.)
genome : 72,637,624 - 72,652,794 (15,171)
query : 1 - 6,909 (6,909/6,909)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 16.5, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012407)
HIX0012407
HIT000216703
(
S76982
)
(Non-protein coding transcript.)
genome : 72,638,864 - 72,638,943 (80)
query : 1 - 80 (80/80)
1 exon
identity = 0.975
3'(0.975)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012407)
HIX0012407
HIT000215957
(
S61298
)
(Non-protein coding transcript.)
genome : 72,645,463 - 72,645,525 (63)
query : 3 - 64 (62/64)
1 exon
identity = 0.968
3'(0.968)5'
coverage = 0.969
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012407)
HIX0222785
HIT000680231 (
ENST00000567213
)
(Beta-hexosaminidase, eukaryotic type, N-terminal domain containing protein.)
genome : 72,662,691 - 72,668,330 (5,640)
query : 1 - 609 (609/609)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222785)
HIX0012408
HIT000262976
(
BC068211
)
Representative transcript
(Conserved hypothetical protein.)
genome : 72,668,454 - 72,671,129 (2,676)
query : 1 - 2,676 (2,676/2,835)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 8.5, cyto_nucl 6, nucl 2.5, lyso 2,
cysk 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012408)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : ENSPTRT00000013378
HIX0012408
HIT000563366 (
NR_027262
)
(Conserved hypothetical protein.)
genome : 72,668,454 - 72,671,129 (2,676)
query : 1 - 2,676 (2,676/2,835)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 8.5, cyto_nucl 6, nucl 2.5, lyso 2,
cysk 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012408)
HIX0012408
HIT000680602 (
ENST00000567598
)
(Conserved hypothetical protein.)
genome : 72,668,454 - 72,671,129 (2,676)
query : 1 - 2,676 (2,676/2,676)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 8.5, cyto_nucl 6, nucl 2.5, lyso 2,
cysk 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012408)
HIX0012408
HIT000006651
(
AK023377
)
(Conserved hypothetical protein.)
genome : 72,668,707 - 72,670,268 (1,562)
query : 2 - 1,563 (1,562/1,563)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 8.5, cyto_nucl 6, nucl 2.5, lyso 2,
cysk 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012408)
HIX0211902
HIT000197983_07 (
NM_000976
)
(Ribosomal protein L11/L12 family protein.)
genome : 72,671,515 - 72,672,139 (625)
query : 28 - 654 (627/674)
1 exon
identity = 0.955
3'(0.955)5'
coverage = 0.950
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 29.5, cyto_nucl 16
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211902)
HIX0211902
HIT000314699_04 (
ENST00000361436
)
(Ribosomal protein L11/L12 family protein.)
genome : 72,671,515 - 72,672,139 (625)
query : 1 - 627 (627/633)
1 exon
identity = 0.955
3'(0.955)5'
coverage = 0.991
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 29.5, cyto_nucl 16
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211902)
HIX0211902
HIT000635413_06 (
ENST00000536368
)
(Ribosomal protein L11/L12 family protein.)
genome : 72,671,515 - 72,672,107 (593)
query : 1 - 496 (496/499)
2 exons
identity = 0.952
3'(0.954;0.946)5'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211902)
HIX0211902
HIT000476612_05 (
ENST00000393148
)
(Ribosomal protein L11/L12 family protein.)
genome : 72,671,550 - 72,672,079 (530)
query : 1 - 529 (529/529)
1 exon
identity = 0.959
3'(0.959)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211902)
HIX0211902
HIT000581173_04 (
ENST00000477007
)
(Ribosomal protein L11/L12 family protein.)
genome : 72,671,556 - 72,672,051 (496)
query : 1 - 496 (496/496)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, nucl 3, mito 3, mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211902)
HIX0026899
HIT000134319 (
ENST00000341689
)
(Conserved hypothetical protein.)
genome : 72,690,614 - 72,700,370 (9,757)
query : 1 - 1,012 (1,012/1,012)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026899)
HIX0026899
HIT000050304
(
AK131033
)
Representative transcript
(Conserved hypothetical protein.)
genome : 72,690,654 - 72,700,370 (9,717)
query : 13 - 596 (584/596)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.980
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, cyto 10.5, extr 9, nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026899)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB169007
Mus
sp. (Mouse) : BC049695
Bos
sp. (Cow) : BC110205
Canis
sp. (Dog) : ENSCAFT00000027990
Equus
sp. (Horse) : ENSECAT00000010733
Rattus
sp. (Rat) : XM_001075025
Pan
sp. (Chimpanzee) : XM_001163305
HIX0026899
HIT000681152 (
ENST00000568167
)
(Conserved hypothetical protein.)
genome : 72,690,646 - 72,700,370 (9,725)
query : 1 - 724 (724/724)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, cyto 10.5, extr 9, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026899)
HIX0026899
HIT000680682 (
ENST00000567679
)
(Conserved hypothetical protein.)
genome : 72,690,650 - 72,700,370 (9,721)
query : 1 - 588 (588/588)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13, cyto 10.5, extr 9, nucl 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026899)
HIX0026899
HIT000398050 (
NM_001080462
)
(Conserved hypothetical protein.)
genome : 72,690,668 - 72,700,708 (10,041)
query : 1 - 1,296 (1,296/1,296)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026899)
HIX0012409
HIT000675763 (
ENST00000562573
)
(Hypothetical short protein.)
genome : 72,700,119 - 72,766,550 (66,432)
query : 1 - 723 (723/723)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11, extr 10, nucl 8.5, cyto 6.5, mito 5,
extr_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012409)
HIX0038298
HIT000250494
(
AL360200
)
Representative transcript
(Conserved hypothetical protein.)
genome : 72,757,481 - 72,758,084 (604)
query : 1 - 605 (605/618)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 0.998
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038298)
HIX0038298
HIT000681329 (
ENST00000568345
)
(Conserved hypothetical protein.)
genome : 72,757,469 - 72,758,603 (1,135)
query : 1 - 1,135 (1,135/1,135)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, mito 3, cyto_nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038298)
HIX0222205
HIT000678270 (
ENST00000565181
)
(Conserved hypothetical protein.)
genome : 72,765,185 - 72,767,509 (2,325)
query : 1 - 2,325 (2,325/2,325)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 7.5, cyto_nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222205)
HIX0012409
HIT000009614
(
AK026340
)
Representative transcript
(E3 ubiquitin-protein ligase ARIH1.)
genome : 72,766,177 - 72,767,509 (1,333)
query : 1 - 1,333 (1,333/1,350)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 13, mito 11, E.R. 3, extr 2, pero 2, E.R._golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012409)
HIX0222205
HIT000682998 (
ENST00000570085
)
(Conserved hypothetical protein.)
genome : 72,766,831 - 72,853,888 (87,058)
query : 1 - 807 (807/807)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 12.5, extr 10, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222205)
HIX0222205
HIT000677197 (
ENST00000564062
)
(Zinc finger, C6HC-type domain containing protein.)
genome : 72,766,986 - 72,855,841 (88,856)
query : 1 - 612 (612/612)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 6.5, cyto_nucl 5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222205)
HIX0222205
HIT000680762 (
ENST00000567762
)
(Conserved hypothetical protein.)
genome : 72,767,277 - 72,837,264 (69,988)
query : 1 - 319 (319/319)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 15, cyto 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222205)
HIX0017520
HIT000021985
(
AK097130
)
Representative transcript
(Conserved hypothetical protein.)
genome : 72,773,869 - 72,776,207 (2,339)
query : 1 - 2,342 (2,342/2,342)
1 exon
identity = 0.992
5'(0.992)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017520)
HIX0221911
HIT000679005 (
ENST00000565950
)
(Conserved hypothetical protein.)
genome : 72,858,711 - 72,873,120 (14,410)
query : 1 - 559 (559/559)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, cyto_nucl 10, cyto_mito 8.33333, cyto 8,
nucl 6.5, mito 6.5, cyto_pero 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221911)
HIX0221911
HIT000244345
(
AJ009771
)
Representative transcript
(E3 ubiquitin-protein ligase ARIH1.)
genome : 72,858,903 - 72,877,868 (18,966)
query : 21 - 3,021 (3,001/3,038)
7 exons
identity = 0.997
5'(0.889;0.986;1.000;1.000;1.000;1.000;0.998)3'
coverage = 0.993
InterPro :
IPR002867 : Zinc finger, C6HC-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 3.5, cyto_nucl 3, nucl 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221911)
HIX0221911
HIT000058387
(
AB014774
)
(Conserved hypothetical protein.)
genome : 72,862,618 - 72,875,633 (13,016)
query : 1 - 548 (548/548)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, extr 10, cyto_nucl 9.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221911)
HIX0221911
HIT000674986 (
ENST00000561770
)
(Conserved hypothetical protein.)
genome : 72,864,467 - 72,874,474 (10,008)
query : 1 - 478 (478/478)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, mito 11, nucl 3.5, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221911)
HIX0019387
HIT000022842
(
AK097988
)
Representative transcript
(Conserved hypothetical protein.)
genome : 72,866,207 - 72,868,846 (2,640)
query : 1 - 2,637 (2,637/2,637)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 13.5, extr 8, nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019387)
HIX0221911
HIT000679113 (
ENST00000566063
)
(Conserved hypothetical protein.)
genome : 72,872,899 - 72,875,631 (2,733)
query : 1 - 630 (630/630)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221911)
HIX0221911
HIT000676068 (
ENST00000562891
)
(Conserved hypothetical protein.)
genome : 72,873,063 - 72,875,892 (2,830)
query : 1 - 613 (613/613)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, nucl 5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221911)
HIX0221911
HIT000676470 (
ENST00000563310
)
(Conserved hypothetical protein.)
genome : 72,873,813 - 72,878,900 (5,088)
query : 1 - 4,068 (4,068/4,068)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 18, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221911)
HIX0221911
HIT000055657
(
BX641117
)
(E3 ubiquitin-protein ligase ARIH1.)
genome : 72,874,076 - 72,878,900 (4,825)
query : 1 - 3,806 (3,806/3,825)
2 exons
identity = 0.998
5'(0.998;0.999)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 18, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221911)
HIX0221911
HIT000002811
(
AK000336
)
(Conserved hypothetical protein.)
genome : 72,875,562 - 72,878,539 (2,978)
query : 1 - 2,978 (2,978/2,995)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 27, extr 2, cyto 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221911)
HIX0221911
HIT000024812
(
AL117650
)
(Hypothetical protein.)
genome : 72,876,730 - 72,878,896 (2,167)
query : 7 - 2,173 (2,167/2,189)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.997
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 27.5, mito_nucl 15
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221911)
HIX0134092
HIT000470881 (
ENST00000384957
)
(Non-protein coding transcript.)
genome : 72,879,558 - 72,879,654 (97)
query : 1 - 97 (97/97)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0134092)
HIX0134092
HIT000658351 (
NR_030359
)
(Non-protein coding transcript.)
genome : 72,879,558 - 72,879,654 (97)
query : 1 - 97 (97/97)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0134092)
HIX0022697
HIT000043542
(
AK123669
)
Representative transcript
(Conserved hypothetical protein.)
genome : 72,882,032 - 72,884,186 (2,155)
query : 1 - 2,155 (2,155/2,155)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022697)
HIX0222778
HIT000679331 (
ENST00000566291
)
(Conserved hypothetical protein.)
genome : 72,882,032 - 72,884,186 (2,155)
query : 1 - 2,155 (2,155/2,155)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15.5, mito_pero 9.33333, extr 8, cyto 4.5,
cyto_pero 3.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222778)
HIX0022697
HIT000019506
(
AK094651
)
(Conserved hypothetical protein.)
genome : 72,883,913 - 72,885,647 (1,735)
query : 1 - 1,735 (1,735/1,735)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022697)
HIX0222726
HIT000676377 (
ENST00000563214
)
(Conserved hypothetical protein.)
genome : 72,897,524 - 72,904,667 (7,144)
query : 1 - 1,194 (1,194/1,194)
11 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.995;1.000;1.000;0.978)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 9, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222726)
HIX0173040
HIT000678390 (
ENST00000565305
)
(Conserved hypothetical protein.)
genome : 72,900,828 - 72,929,229 (28,402)
query : 1 - 439 (439/439)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto_nucl 4, nucl 3, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173040)
HIX0173040
HIT000678616 (
ENST00000565543
)
(Conserved hypothetical protein.)
genome : 72,900,978 - 72,929,260 (28,283)
query : 1 - 438 (438/438)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto 9, cyto_nucl 8, nucl 5, golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173040)
HIX0172912
HIT000443214_08
(
DQ576683
)
Representative transcript
(Non-protein coding transcript.)
genome : 72,903,394 - 72,903,423 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172912)
HIX0211498
HIT000451998_04
(
DQ585467
)
(Non-protein coding transcript.)
genome : 72,903,433 - 72,903,463 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211498)
HIX0211498
HIT000451997_04
(
DQ585466
)
(Non-protein coding transcript.)
genome : 72,903,436 - 72,903,463 (28)
query : 1 - 28 (28/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.933
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211498)
HIX0211498
HIT000444481_04
(
DQ577950
)
(Non-protein coding transcript.)
genome : 72,903,436 - 72,903,465 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211498)
HIX0211498
HIT000449289_04
(
DQ582758
)
(Non-protein coding transcript.)
genome : 72,903,437 - 72,903,468 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211498)
HIX0211498
HIT000440339_04
(
DQ573808
)
(Non-protein coding transcript.)
genome : 72,903,438 - 72,903,467 (30)
query : 2 - 31 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211498)
HIX0211498
HIT000449288_04
(
DQ582757
)
(Non-protein coding transcript.)
genome : 72,903,438 - 72,903,468 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211498)
HIX0211498
HIT000449059_04
(
DQ582528
)
(Non-protein coding transcript.)
genome : 72,903,438 - 72,903,467 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211498)
HIX0211498
HIT000436972_04
(
DQ570441
)
(Non-protein coding transcript.)
genome : 72,903,439 - 72,903,469 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211498)
HIX0211498
HIT000449287_04
(
DQ582756
)
(Non-protein coding transcript.)
genome : 72,903,439 - 72,903,468 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211498)
HIX0211498
HIT000449190_04
(
DQ582659
)
(Non-protein coding transcript.)
genome : 72,903,442 - 72,903,471 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211498)
HIX0211498
HIT000438421_04
(
DQ571890
)
Representative transcript
(Non-protein coding transcript.)
genome : 72,903,443 - 72,903,474 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211498)
HIX0211498
HIT000449116_04
(
DQ582585
)
(Non-protein coding transcript.)
genome : 72,903,444 - 72,903,475 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211498)
HIX0211498
HIT000449117_04
(
DQ582586
)
(Non-protein coding transcript.)
genome : 72,903,445 - 72,903,475 (31)
query : 1 - 31 (31/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.969
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211498)
HIX0211498
HIT000436564_04
(
DQ570033
)
(Non-protein coding transcript.)
genome : 72,903,444 - 72,903,473 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211498)
HIX0211498
HIT000449115_04
(
DQ582584
)
(Non-protein coding transcript.)
genome : 72,903,445 - 72,903,475 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211498)
HIX0211498
HIT000437491_04
(
DQ570960
)
(Non-protein coding transcript.)
genome : 72,903,448 - 72,903,477 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211498)
HIX0211498
HIT000464311_04
(
DQ597780
)
(Non-protein coding transcript.)
genome : 72,903,449 - 72,903,479 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211498)
HIX0211577
HIT000448604_08
(
DQ582073
)
Representative transcript
(Non-protein coding transcript.)
genome : 72,903,491 - 72,903,521 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211577)
HIX0211577
HIT000448603_08
(
DQ582072
)
(Non-protein coding transcript.)
genome : 72,903,492 - 72,903,521 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211577)
HIX0222314
HIT000582563 (
ENST00000478458
)
(Hypothetical short protein.)
genome : 72,904,161 - 72,904,401 (241)
query : 1 - 241 (241/241)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
This sequence is too short.
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222314)
HIX0022896
HIT000676618 (
ENST00000563464
)
(Hypothetical short protein.)
genome : 72,908,151 - 72,910,591 (2,441)
query : 1 - 2,441 (2,441/2,441)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, nucl 15.5, cyto 10.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022896)
HIX0022896
HIT000018634
(
AK093767
)
Representative transcript
(Conserved hypothetical protein.)
genome : 72,908,151 - 72,910,583 (2,433)
query : 1 - 2,433 (2,433/2,433)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17.5, nucl 15.5, cyto 10.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022896)
HIX0173040
HIT000463887_03
(
DQ597356
)
Representative transcript
(Non-protein coding transcript.)
genome : 72,925,680 - 72,925,709 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173040)
HIX0222061
HIT000481963_04 (
ENST00000398821
)
(HCaRG family protein.)
genome : 72,931,162 - 72,933,994 (2,833)
query : 1 - 459 (459/459)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 5.5, cyto_nucl 5.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222061)
HIX0222061
HIT000682779_01 (
ENST00000569853
)
(HCaRG family protein.)
genome : 72,931,162 - 72,932,466 (1,305)
query : 1 - 382 (382/382)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 6, cyto 4, mito_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222061)
HIX0222061
HIT000678156_01 (
ENST00000565063
)
(HCaRG family protein.)
genome : 72,931,165 - 72,932,473 (1,309)
query : 1 - 386 (386/386)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222061)
HIX0172882
HIT000438477_06
(
DQ571946
)
Representative transcript
(Non-protein coding transcript.)
genome : 72,945,872 - 72,945,901 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172882)
HIX0038164
HIT000207354 (
NM_018652
)
(Golgin subfamily A protein.)
genome : 72,947,038 - 72,959,738 (12,701)
query : 1 - 3,178 (3,178/3,178)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 17.3333, cyto 12, cyto_golg 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038164)
HIX0038164
HIT000681692_01 (
ENST00000568723
)
(Hypothetical protein.)
genome : 72,947,038 - 72,952,512 (5,475)
query : 1 - 527 (527/527)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, cyto_nucl 14.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038164)
HIX0038164
HIT000519219 (
ENST00000421285
)
(Golgin subfamily A protein.)
genome : 72,947,079 - 72,958,735 (11,657)
query : 1 - 2,134 (2,134/2,134)
18 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 17.3333, cyto 12, cyto_golg 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038164)
HIX0038164
HIT000681508_01 (
ENST00000568532
)
(Hypothetical protein.)
genome : 72,950,899 - 72,952,512 (1,614)
query : 1 - 402 (402/402)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, extr 11, nucl 6, cyto_pero 6, cyto_plas 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038164)
HIX0172924
HIT000444576_08
(
DQ578045
)
Representative transcript
(Non-protein coding transcript.)
genome : 72,953,961 - 72,953,991 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172924)
HIX0172913
HIT000443214_09
(
DQ576683
)
Representative transcript
(Non-protein coding transcript.)
genome : 72,956,142 - 72,956,171 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172913)
HIX0211534
HIT000451998_05
(
DQ585467
)
(Non-protein coding transcript.)
genome : 72,956,181 - 72,956,211 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211534)
HIX0211534
HIT000451997_05
(
DQ585466
)
(Non-protein coding transcript.)
genome : 72,956,184 - 72,956,211 (28)
query : 1 - 28 (28/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.933
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211534)
HIX0211534
HIT000444481_05
(
DQ577950
)
(Non-protein coding transcript.)
genome : 72,956,184 - 72,956,213 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211534)
HIX0211534
HIT000449289_05
(
DQ582758
)
Representative transcript
(Non-protein coding transcript.)
genome : 72,956,185 - 72,956,216 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211534)
HIX0211534
HIT000440339_05
(
DQ573808
)
(Non-protein coding transcript.)
genome : 72,956,186 - 72,956,215 (30)
query : 2 - 31 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211534)
HIX0211534
HIT000449288_05
(
DQ582757
)
(Non-protein coding transcript.)
genome : 72,956,186 - 72,956,216 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211534)
HIX0211534
HIT000449059_05
(
DQ582528
)
(Non-protein coding transcript.)
genome : 72,956,186 - 72,956,215 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211534)
HIX0222082
HIT000582075_02 (
ENST00000477951
)
(Hypothetical short protein.)
genome : 72,956,896 - 72,957,171 (276)
query : 1 - 276 (276/276)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
This sequence is too short.
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222082)
HIX0222082
HIT000583171_02 (
ENST00000479090
)
(Hypothetical short protein.)
genome : 72,956,896 - 72,957,171 (276)
query : 1 - 276 (276/276)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
This sequence is too short.
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222082)
HIX0222082
HIT000589953_02 (
ENST00000486185
)
(Hypothetical short protein.)
genome : 72,956,896 - 72,957,171 (276)
query : 1 - 276 (276/276)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
This sequence is too short.
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222082)
HIX0222082
HIT000592298_02 (
ENST00000488659
)
(Hypothetical short protein.)
genome : 72,956,896 - 72,957,171 (276)
query : 1 - 276 (276/276)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
This sequence is too short.
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222082)
HIX0172678
HIT000438113_10
(
DQ571582
)
(Non-protein coding transcript.)
genome : 72,956,899 - 72,956,927 (29)
query : 3 - 31 (29/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.935
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172678)
HIX0172678
HIT000442677_10
(
DQ576146
)
Representative transcript
(Non-protein coding transcript.)
genome : 72,956,899 - 72,956,927 (29)
query : 2 - 30 (29/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.967
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172678)
HIX0173073
HIT000467286_05
(
DQ600755
)
Representative transcript
(Non-protein coding transcript.)
genome : 72,958,698 - 72,958,727 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0173073)
HIX0172919
HIT000443986_11
(
DQ577455
)
Representative transcript
(Non-protein coding transcript.)
genome : 72,962,003 - 72,962,033 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172919)
HIX0172868
HIT000438097_08
(
DQ571566
)
Representative transcript
(Non-protein coding transcript.)
genome : 72,962,446 - 72,962,475 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172868)
HIX0172980
HIT000454729_05
(
DQ588198
)
Representative transcript
(Non-protein coding transcript.)
genome : 72,963,093 - 72,963,122 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0172980)
HIX0038135
HIT000096427
(
BC040890
)
Representative transcript
(HIG1 domain family member 2A, mitochondrial; RCF1 homolog B; RCF1b;)
genome : 72,968,123 - 72,978,490 (10,368)
query : 1 - 1,117 (1,117/1,210)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR007667 : Hypoxia induced protein, domain
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 15, mito 8.5, cyto_mito 6.5, cyto 3.5, extr 1,
nucl 1, E.R. 1, lyso 1, golg 1, E.R._golg 1
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038135)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : ENSMMUT00000040379
Pongo
sp. (Orangutan) : ENSPPYT00000007812
Pan
sp. (Chimpanzee) : XM_523210
HIX0038135
HIT000367126 (
NR_002780
)
(HIG1 domain family member 2A, mitochondrial; RCF1 homolog B; RCF1b;)
genome : 72,968,123 - 72,978,490 (10,368)
query : 1 - 1,117 (1,117/1,210)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 15, mito 8.5, cyto_mito 6.5, cyto 3.5, extr 1,
nucl 1, E.R. 1, lyso 1, golg 1, E.R._golg 1
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038135)
HIX0038135
HIT000119165 (
ENST00000311755
)
(HIG1 domain family member 2A, mitochondrial; RCF1 homolog B; RCF1b;)
genome : 72,968,124 - 72,978,490 (10,367)
query : 1 - 1,116 (1,116/1,116)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 15, mito 8.5, cyto_mito 6.5, cyto 3.5, extr 1,
nucl 1, E.R. 1, lyso 1, golg 1, E.R._golg 1
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038135)
HIX0222752
HIT000678037 (
ENST00000564938
)
(Conserved hypothetical protein.)
genome : 72,974,607 - 72,975,245 (639)
query : 1 - 316 (316/316)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 14, nucl 8.5, cyto_pero 8.5,
cyto_plas 8.5, cyto_golg 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222752)
HIX0221989
pHIT000025398 ( pHIT000025398 )
(Conserved hypothetical protein.)
genome : 72,978,311 - 73,029,928 (51,618)
query : 1 - 1,437 (1,437/1,437)
13 exons
InterPro :
IPR011990 : Tetratricopeptide-like helical domain
IPR013026 : Tetratricopeptide repeat-containing domain
IPR013105 : Tetratricopeptide TPR2
IPR019734 : Tetratricopeptide repeat
IPR028786 : Bardet-Biedl syndrome 4 protein
GO :
0005515 : Molecular Function : protein binding
0034464 : Cellular Component : BBSome
0035058 : Biological Process : nonmotile primary cilium assembly
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221989)
CAGE tag :
H09BA01G1706
HIX0221989
HIT000676745 (
ENST00000563600
)
(Conserved hypothetical protein.)
genome : 72,978,548 - 73,015,162 (36,615)
query : 1 - 557 (557/557)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 8, cyto_nucl 7.5, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221989)
HIX0221989
HIT000679856 (
ENST00000566829
)
(Bardet-Biedl syndrome 4 protein family protein.)
genome : 72,978,731 - 73,009,192 (30,462)
query : 1 - 551 (551/551)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, mito 12.5, mito_nucl 7, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221989)
HIX0221989
HIT000677368 (
ENST00000564239
)
(Tetratricopeptide-like helical domain containing protein.)
genome : 72,979,091 - 73,015,189 (36,099)
query : 1 - 527 (527/527)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 10, nucl 7, cyto 5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221989)
HIX0221989
HIT000459629
(
DQ593098
)
(Non-protein coding transcript.)
genome : 73,007,703 - 73,007,732 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221989)
HIX0221989
HIT000681955 (
ENST00000569001
)
(Hypothetical short protein.)
genome : 73,009,169 - 73,009,696 (528)
query : 1 - 349 (349/349)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221989)
HIX0221989
HIT000428972
(
AK310106
)
(Tetratricopeptide repeat-containing domain containing protein.)
genome : 73,016,867 - 73,027,986 (11,120)
query : 18 - 1,005 (988/1,005)
4 exons
identity = 0.998
5'(1.000;1.000;0.994;0.998)3'
coverage = 0.983
InterPro :
IPR011990 : Tetratricopeptide-like helical domain
IPR013026 : Tetratricopeptide repeat-containing domain
IPR013105 : Tetratricopeptide TPR2
IPR019734 : Tetratricopeptide repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, extr 11, cyto_nucl 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221989)
HIX0221989
HIT000675424 (
ENST00000562219
)
(Tetratricopeptide repeat-containing domain containing protein.)
genome : 73,016,867 - 73,027,986 (11,120)
query : 17 - 1,004 (988/1,004)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.984
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 10.5, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221989)
HIX0221989
HIT000682099 (
ENST00000569151
)
(Tetratricopeptide-like helical domain containing protein.)
genome : 73,023,898 - 73,027,555 (3,658)
query : 1 - 272 (272/272)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 10, extr 7, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221989)
HIX0221989
HIT000068279
(
AF090947
)
Representative transcript
(Tetratricopeptide repeat-containing domain containing protein.)
genome : 73,024,009 - 73,030,815 (6,807)
query : 10 - 1,479 (1,470/1,502)
5 exons
identity = 0.999
5'(1.000;0.986;0.993;1.000;1.000)3'
coverage = 0.985
InterPro :
IPR011990 : Tetratricopeptide-like helical domain
IPR013026 : Tetratricopeptide repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto_nucl 4, nucl 3.5, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221989)
HIX0221989
HIT000679243 (
ENST00000566197
)
(Tetratricopeptide-like helical domain containing protein.)
genome : 73,024,023 - 73,029,864 (5,842)
query : 1 - 541 (541/541)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221989)
HIX0133563
HIT000457189
(
DQ590658
)
Representative transcript
(Non-protein coding transcript.)
genome : 73,025,962 - 73,025,992 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0133563)
HIX0221989
HIT000681511 (
ENST00000568535
)
(Conserved hypothetical protein.)
genome : 73,027,858 - 73,029,433 (1,576)
query : 1 - 781 (781/781)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11, cyto 10, extr 8, nucl 8, mito 4,
extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221989)
HIX0221942
HIT000025469
(
AL136873
)
Representative transcript
(ADP-dependent glucokinase precursor.)
genome : 73,043,709 - 73,048,504 (4,796)
query : 16 - 1,821 (1,806/1,840)
3 exons
identity = 0.999
3'(0.999;1.000;1.000)5'
coverage = 0.992
EC number :
EC 2.7.1.147
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR007666 : ADP-specific phosphofructokinase/glucokinase
IPR029056 : Ribokinase-like
GO :
0005975 : Biological Process : carbohydrate metabolic process
0016773 : Molecular Function : phosphotransferase activity, alcohol group as acceptor
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.8333, cyto 11.5, nucl 10, extr 8,
cyto_pero 7.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221942)
HIX0221942
HIT000027166
(
AL832254
)
(ADP-dependent glucokinase precursor.)
genome : 73,043,711 - 73,050,951 (7,241)
query : 1 - 4,577 (4,577/4,593)
2 exons
identity = 1.000
3'(0.999;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.147
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR007666 : ADP-specific phosphofructokinase/glucokinase
IPR029056 : Ribokinase-like
GO :
0005975 : Biological Process : carbohydrate metabolic process
0016773 : Molecular Function : phosphotransferase activity, alcohol group as acceptor
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 9.5, cyto_nucl 8.5, plas 7.5, nucl 6.5,
extr_plas 4.5, E.R. 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221942)
HIX0221942
HIT000682629 (
ENST00000569693
)
(ADP-specific phosphofructokinase/glucokinase family protein.)
genome : 73,043,710 - 73,048,504 (4,795)
query : 16 - 1,820 (1,805/1,820)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.992
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.8333, cyto 11.5, nucl 10, extr 8,
cyto_pero 7.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221942)
HIX0221942
HIT000014260
(
AK057651
)
(ADP-dependent glucokinase precursor.)
genome : 73,043,710 - 73,046,198 (2,489)
query : 1 - 2,300 (2,300/2,300)
2 exons
identity = 0.996
3'(1.000;0.995)5'
coverage = 1.000
EC number :
EC 2.7.1.147
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR007666 : ADP-specific phosphofructokinase/glucokinase
IPR029056 : Ribokinase-like
GO :
0005975 : Biological Process : carbohydrate metabolic process
0016773 : Molecular Function : phosphotransferase activity, alcohol group as acceptor
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 15, nucl 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221942)
HIX0221942
HIT000675807 (
ENST00000562621
)
(ADP-specific phosphofructokinase/glucokinase family protein.)
genome : 73,043,713 - 73,050,951 (7,239)
query : 1 - 4,576 (4,576/4,576)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 9.5, cyto_nucl 8.5, plas 7.5, nucl 6.5,
extr_plas 4.5, E.R. 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221942)
HIX0221942
HIT000268295
(
CR533447
)
(ADP-specific phosphofructokinase/glucokinase family protein.)
genome : 73,044,543 - 73,048,000 (3,458)
query : 13 - 808 (796/808)
2 exons
identity = 0.997
3'(0.999;0.990)5'
coverage = 0.985
InterPro :
IPR007666 : ADP-specific phosphofructokinase/glucokinase
IPR029056 : Ribokinase-like
GO :
0005975 : Biological Process : carbohydrate metabolic process
0016773 : Molecular Function : phosphotransferase activity, alcohol group as acceptor
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.8333, cyto 11.5, nucl 10, extr 8,
cyto_pero 7.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221942)
HIX0221942
HIT000554405 (
ENST00000456471
)
(ADP-specific phosphofructokinase/glucokinase family protein.)
genome : 73,044,543 - 73,048,000 (3,458)
query : 13 - 808 (796/808)
2 exons
identity = 0.999
3'(1.000;0.990)5'
coverage = 0.985
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.8333, cyto 11.5, nucl 10, extr 8,
cyto_pero 7.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221942)
HIX0222779
HIT000679545 (
ENST00000566509
)
(ADP-specific phosphofructokinase/glucokinase family protein.)
genome : 73,052,590 - 73,067,455 (14,866)
query : 1 - 585 (585/585)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto 12, cyto_pero 7.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222779)
HIX0222260
HIT000089559
(
BC018074
)
Representative transcript
(ADP-specific phosphofructokinase/glucokinase family protein.)
genome : 73,074,948 - 73,076,053 (1,106)
query : 1 - 1,106 (1,106/1,121)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
InterPro :
IPR007666 : ADP-specific phosphofructokinase/glucokinase
GO :
0005975 : Biological Process : carbohydrate metabolic process
0016773 : Molecular Function : phosphotransferase activity, alcohol group as acceptor
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222260)
HIX0026868
HIT000047750
(
AK127877
)
Representative transcript
(Conserved hypothetical protein.)
genome : 73,075,176 - 73,090,540 (15,365)
query : 3 - 2,732 (2,730/2,732)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026868)
HIX0026868
HIT000676737 (
ENST00000563592
)
(Conserved hypothetical protein.)
genome : 73,075,176 - 73,090,540 (15,365)
query : 1 - 2,730 (2,730/2,730)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026868)
HIX0026868
HIT000726167 (
NR_040107
)
(Conserved hypothetical protein.)
genome : 73,075,176 - 73,090,540 (15,365)
query : 1 - 2,730 (2,730/2,730)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, mito 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026868)
HIX0026868
HIT000679774 (
ENST00000566745
)
(Conserved hypothetical protein.)
genome : 73,077,353 - 73,085,304 (7,952)
query : 1 - 765 (765/765)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11, cyto_nucl 10.5, extr 8, cyto 8, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026868)
HIX0222593
HIT000673574 (
ENST00000560329
)
(Nucleoplasmin family protein.)
genome : 73,191,740 - 73,192,601 (862)
query : 1 - 862 (862/862)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 9, nucl 7, cyto_mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222593)
HIX0038163
HIT000131992 (
ENST00000339362
)
(Neogenin; Immunoglobulin superfamily DCC subclass member 2; Precursor;)
genome : 73,344,051 - 73,597,546 (253,496)
query : 1 - 7,342 (7,342/7,342)
30 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 7, mito 6.5, extr_plas 6.5, extr 6, cyto_mito 5,
pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038163)
HIX0038163
HIT000108187 (
ENST00000261908
)
(Neogenin; Immunoglobulin superfamily DCC subclass member 2; Precursor;)
genome : 73,344,825 - 73,597,547 (252,723)
query : 1 - 7,088 (7,088/7,088)
29 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 7, mito 6.5, extr_plas 6.5, extr 6, cyto_mito 5,
pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038163)
HIX0038163
HIT000199392 (
NM_002499
)
(Neogenin; Immunoglobulin superfamily DCC subclass member 2; Precursor;)
genome : 73,344,825 - 73,597,547 (252,723)
query : 1 - 7,088 (7,088/7,088)
29 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 7, mito 6.5, extr_plas 6.5, extr 6, cyto_mito 5,
pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038163)
HIX0038163
HIT000654939 (
NM_001172623
)
(Neogenin isoform 2 precursor.)
genome : 73,344,825 - 73,597,547 (252,723)
query : 1 - 6,929 (6,929/6,929)
28 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 7, mito 6.5, extr_plas 6.5, extr 6, cyto_mito 5,
pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038163)
HIX0038163
HIT000654940 (
NM_001172624
)
(Neogenin; Immunoglobulin superfamily DCC subclass member 2; Precursor;)
genome : 73,344,825 - 73,597,547 (252,723)
query : 1 - 7,055 (7,055/7,055)
28 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 7, mito 6.5, extr_plas 6.5, extr 6, cyto_mito 5,
pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038163)
HIX0038163
HIT000220683
(
U61262
)
(Neogenin; Immunoglobulin superfamily DCC subclass member 2; Precursor;)
genome : 73,344,875 - 73,595,783 (250,909)
query : 1 - 5,269 (5,269/5,297)
29 exons
identity = 0.998
5'(0.974;1.000;0.989;1.000;1.000;1.000;1.000;
1.000;1.000;0.993;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.991;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.999)3'
coverage = 1.000
InterPro :
IPR003598 : Immunoglobulin subtype 2
IPR003961 : Fibronectin type III
IPR010560 : Neogenin, C-terminal
IPR013098 : Immunoglobulin I-set
GO :
0005515 : Molecular Function : protein binding
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 7, mito 6.5, extr_plas 6.5, extr 6, cyto_mito 5,
pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038163)
HIX0038163
HIT000221174
(
U72391
)
Representative transcript
(Neogenin; Immunoglobulin superfamily DCC subclass member 2; Precursor;)
genome : 73,344,891 - 73,595,156 (250,266)
query : 1 - 4,631 (4,631/4,631)
29 exons
identity = 0.999
5'(0.992;0.997;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR003598 : Immunoglobulin subtype 2
IPR003961 : Fibronectin type III
IPR010560 : Neogenin, C-terminal
IPR013098 : Immunoglobulin I-set
GO :
0005515 : Molecular Function : protein binding
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 7, mito 6.5, extr_plas 6.5, extr 6, cyto_mito 5,
pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038163)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : AY029280
Oryzias
sp. (Medaka) : ENSORLT00000001987
Pongo
sp. (Orangutan) : ENSPPYT00000007816
Tetraodon
sp. (Tetraodon) : GSTENT00018147001
Takifugu
sp. (Fugu) : SINFRUT00000165637
Gallus
sp. (Chicken) : U07644
Rattus
sp. (Rat) : U68726
Macaca
sp. (Macaque) : XM_001093533
Monodelphis
sp. (Opossum) : XM_001378964
Equus
sp. (Horse) : XM_001494512
Pan
sp. (Chimpanzee) : XM_510660
Canis
sp. (Dog) : XM_544760
Bos
sp. (Cow) : XM_864937
Mus
sp. (Mouse) : Y09535
HIX0038163
HIT000501730
(
BC143270
)
(Neogenin isoform 2 precursor.)
genome : 73,344,951 - 73,595,059 (250,109)
query : 2 - 4,316 (4,315/4,316)
28 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR003598 : Immunoglobulin subtype 2
IPR003961 : Fibronectin type III
IPR010560 : Neogenin, C-terminal
IPR013098 : Immunoglobulin I-set
GO :
0005515 : Molecular Function : protein binding
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 7, mito 6.5, extr_plas 6.5, extr 6, cyto_mito 5,
pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038163)
HIX0038163
HIT000501739
(
BC143279
)
(Neogenin isoform 3 precursor.)
genome : 73,344,951 - 73,595,059 (250,109)
query : 2 - 4,437 (4,436/4,437)
28 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR003961 : Fibronectin type III
IPR010560 : Neogenin, C-terminal
GO :
0005515 : Molecular Function : protein binding
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 11, mito 9, pero 5, E.R._mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038163)
HIX0038163
HIT000387451
(
BC117161
)
(Neogenin; Immunoglobulin superfamily DCC subclass member 2; Precursor;)
genome : 73,344,951 - 73,595,059 (250,109)
query : 1 - 4,474 (4,474/4,474)
29 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR003598 : Immunoglobulin subtype 2
IPR003961 : Fibronectin type III
IPR010560 : Neogenin, C-terminal
IPR013098 : Immunoglobulin I-set
GO :
0005515 : Molecular Function : protein binding
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 7, mito 6.5, extr_plas 6.5, extr 6, cyto_mito 5,
pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038163)
HIX0038163
HIT000501731
(
BC143271
)
(Neogenin; Immunoglobulin superfamily DCC subclass member 2; Precursor;)
genome : 73,344,951 - 73,595,059 (250,109)
query : 1 - 4,441 (4,441/4,441)
28 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR003598 : Immunoglobulin subtype 2
IPR003961 : Fibronectin type III
IPR010560 : Neogenin, C-terminal
IPR013098 : Immunoglobulin I-set
GO :
0005515 : Molecular Function : protein binding
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 7, mito 6.5, extr_plas 6.5, extr 6, cyto_mito 5,
pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038163)
HIX0038163
HIT000672236 (
ENST00000558964
)
(Neogenin; Immunoglobulin superfamily DCC subclass member 2; Precursor;)
genome : 73,344,951 - 73,595,059 (250,109)
query : 1 - 4,441 (4,441/4,441)
28 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 7, mito 6.5, extr_plas 6.5, extr 6, cyto_mito 5,
pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038163)
HIX0038163
HIT000673508 (
ENST00000560262
)
(Neogenin isoform 2 precursor.)
genome : 73,344,951 - 73,595,059 (250,109)
query : 1 - 4,315 (4,315/4,315)
28 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 7, mito 6.5, extr_plas 6.5, extr 6, cyto_mito 5,
pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038163)
HIX0038163
HIT000671764 (
ENST00000558485
)
(Neogenin; Precursor;)
genome : 73,414,975 - 73,418,964 (3,990)
query : 1 - 374 (374/374)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, mito 13, cyto_nucl 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038163)
HIX0038163
HIT000329347
(
AB209412
)
(Neogenin isoform 3 precursor.)
genome : 73,428,326 - 73,597,539 (169,214)
query : 1 - 5,895 (5,895/5,895)
24 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR003598 : Immunoglobulin subtype 2
IPR003961 : Fibronectin type III
IPR010560 : Neogenin, C-terminal
IPR013098 : Immunoglobulin I-set
GO :
0005515 : Molecular Function : protein binding
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 9.5, nucl 6.5, pero 5, plas 4.5,
extr_plas 3, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038163)
HIX0038163
HIT000673573 (
ENST00000560328
)
(Neogenin isoform 3 precursor.)
genome : 73,428,326 - 73,597,539 (169,214)
query : 1 - 5,895 (5,895/5,895)
24 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 9.5, nucl 6.5, pero 5, plas 4.5,
extr_plas 3, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038163)
HIX0222656
HIT000674187 (
ENST00000560953
)
(Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain containing protein.)
genome : 73,435,577 - 73,435,859 (283)
query : 1 - 283 (283/283)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, mito 8, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222656)
HIX0222458
HIT000671944 (
ENST00000558669
)
(Nucleoplasmin core domain containing protein.)
genome : 73,454,120 - 73,455,269 (1,150)
query : 1 - 786 (786/786)
2 exons
identity = 0.997
3'(0.998;0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 13, extr 8, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222458)
HIX0038163
HIT000673597 (
ENST00000560352
)
(Neogenin; Immunoglobulin superfamily DCC subclass member 2; Precursor;)
genome : 73,514,034 - 73,541,982 (27,949)
query : 1 - 566 (566/566)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 17, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038163)
HIX0038163
HIT000673651 (
ENST00000560407
)
(Neogenin; Immunoglobulin superfamily DCC subclass member 2; Precursor;)
genome : 73,514,260 - 73,536,823 (22,564)
query : 1 - 468 (468/468)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto_nucl 4.16667, cyto_pero 3.66667, nucl 3,
cyto 3, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038163)
HIX0038163
HIT000672081 (
ENST00000558807
)
(Neogenin; Immunoglobulin superfamily DCC subclass member 2; Precursor;)
genome : 73,547,058 - 73,551,452 (4,395)
query : 1 - 459 (459/459)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, nucl 8, cyto_nucl 7, cyto 4, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038163)
HIX0222595
HIT000673582 (
ENST00000560337
)
(Hypothetical protein.)
genome : 73,547,675 - 73,548,450 (776)
query : 1 - 531 (531/531)
2 exons
identity = 0.994
3'(0.986;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto_nucl 4, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222595)
HIX0038163
HIT000674045 (
ENST00000560808
)
(Neogenin; Immunoglobulin superfamily DCC subclass member 2; Precursor;)
genome : 73,581,415 - 73,595,274 (13,860)
query : 1 - 1,046 (1,046/1,046)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15.5, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038163)
HIX0038163
HIT000672160 (
ENST00000558886
)
(Neogenin; Immunoglobulin superfamily DCC subclass member 2; Precursor;)
genome : 73,590,640 - 73,593,891 (3,252)
query : 1 - 543 (543/543)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 14.5, cyto 7, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038163)
HIX0038163
HIT000250357
(
AL355708
)
(Hypothetical short protein.)
genome : 73,595,852 - 73,597,544 (1,693)
query : 1 - 1,693 (1,693/1,715)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 7, cyto_pero 5, nucl 3, mito 2.5,
golg 2, E.R._mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038163)
HIX0038163
HIT000026424
(
AL390182
)
(Hypothetical short protein.)
genome : 73,595,852 - 73,597,544 (1,693)
query : 1 - 1,693 (1,693/1,710)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 7, cyto_pero 5, nucl 3, mito 2.5,
golg 2, E.R._mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038163)
HIX0038163
HIT000026325
(
AL359597
)
(Hypothetical short protein.)
genome : 73,596,334 - 73,597,544 (1,211)
query : 44 - 1,255 (1,212/1,274)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 0.964
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 7, cyto_pero 5, nucl 3, mito 2.5,
golg 2, E.R._mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038163)
HIX0202182
HIT000052556
(
BC041421
)
(Photoreceptor-specific nuclear receptor; Nuclear receptor subfamily 2 group E member 3; Retina-specific nuclear receptor;)
genome : 72,084,977 - 72,110,571 (25,595)
query : 3 - 2,005 (2,003/2,019)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.996;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR000536 : Nuclear hormone receptor, ligand-binding, core
IPR001628 : Zinc finger, nuclear hormone receptor-type
IPR001723 : Steroid hormone receptor
IPR008946 : Nuclear hormone receptor, ligand-binding
IPR013088 : Zinc finger, NHR/GATA-type
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0003707 : Molecular Function : steroid hormone receptor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0043401 : Biological Process : steroid hormone mediated signaling pathway
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, nucl 14, cyto 13, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202182)
HIX0202182
HIT000674822 (
ENST00000561604
)
(Photoreceptor-specific nuclear receptor; Nuclear receptor subfamily 2 group E member 3; Retina-specific nuclear receptor;)
genome : 72,084,977 - 72,110,600 (25,624)
query : 1 - 2,033 (2,033/2,033)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto 10.5, extr 6, cyto_pero 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202182)
HIX0202182
HIT000124804 (
ENST00000326995
)
(Photoreceptor-specific nuclear receptor; Nuclear receptor subfamily 2 group E member 3; Retina-specific nuclear receptor;)
genome : 72,084,977 - 72,110,559 (25,583)
query : 1 - 1,991 (1,991/1,991)
10 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.996;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, nucl 14, cyto 13, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202182)
HIX0202182
HIT000070323
(
AF121129
)
Representative transcript
(Photoreceptor-specific nuclear receptor; Nuclear receptor subfamily 2 group E member 3; Retina-specific nuclear receptor;)
genome : 72,102,894 - 72,110,600 (7,707)
query : 1 - 1,999 (1,999/2,000)
8 exons
identity = 0.994
5'(0.997;1.000;1.000;1.000;1.000;0.996;1.000;
0.985)3'
coverage = 1.000
InterPro :
IPR000003 : Retinoid X receptor/HNF4
IPR000536 : Nuclear hormone receptor, ligand-binding, core
IPR001628 : Zinc finger, nuclear hormone receptor-type
IPR001723 : Steroid hormone receptor
IPR008946 : Nuclear hormone receptor, ligand-binding
IPR013088 : Zinc finger, NHR/GATA-type
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0003707 : Molecular Function : steroid hormone receptor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0043401 : Biological Process : steroid hormone mediated signaling pathway
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202182)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : AF107729
Mus
sp. (Mouse) : AF204053
Gallus
sp. (Chicken) : AY053465
Danio
sp. (Zebrafish) : BC085568
Equus
sp. (Horse) : ENSECAT00000016125
Oryzias
sp. (Medaka) : ENSORLT00000000016
Pongo
sp. (Orangutan) : ENSPPYT00000007797
Tetraodon
sp. (Tetraodon) : GSTENT00009122001
Takifugu
sp. (Fugu) : SINFRUT00000146354
Macaca
sp. (Macaque) : XM_001089693
Pan
sp. (Chimpanzee) : XM_001175020
Monodelphis
sp. (Opossum) : XM_001371384
HIX0202182
HIT000204639 (
NM_014249
)
(Photoreceptor-specific nuclear receptor; Nuclear receptor subfamily 2 group E member 3; Retina-specific nuclear receptor;)
genome : 72,102,894 - 72,110,600 (7,707)
query : 1 - 1,998 (1,998/1,999)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.996;1.000;
1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202182)
HIX0202182
HIT000680504 (
ENST00000567496
)
(Photoreceptor-specific nuclear receptor; Nuclear receptor subfamily 2 group E member 3; Retina-specific nuclear receptor;)
genome : 72,102,894 - 72,110,600 (7,707)
query : 1 - 1,999 (1,999/1,999)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202182)
HIX0202182
HIT000486621
(
AB307710
)
(Photoreceptor-specific nuclear receptor; Nuclear receptor subfamily 2 group E member 3; Retina-specific nuclear receptor;)
genome : 72,103,084 - 72,110,025 (6,942)
query : 1 - 1,233 (1,233/1,233)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.996;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR000003 : Retinoid X receptor/HNF4
IPR000536 : Nuclear hormone receptor, ligand-binding, core
IPR001628 : Zinc finger, nuclear hormone receptor-type
IPR001723 : Steroid hormone receptor
IPR008946 : Nuclear hormone receptor, ligand-binding
IPR013088 : Zinc finger, NHR/GATA-type
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0003707 : Molecular Function : steroid hormone receptor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0043401 : Biological Process : steroid hormone mediated signaling pathway
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202182)
HIX0202182
HIT000676099 (
ENST00000562925
)
(Photoreceptor-specific nuclear receptor isoform a.)
genome : 72,103,473 - 72,110,571 (7,099)
query : 1 - 2,012 (2,012/2,026)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto 10.5, extr 6, cyto_pero 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202182)
HIX0222864
HIT000095222
(
BC038451
)
(GRAM domain-containing protein 2.)
genome : 72,452,147 - 72,490,110 (37,964)
query : 1 - 3,264 (3,264/3,340)
12 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004182 : GRAM domain
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 7.5, nucl 7, plas 5.5, cyto_mito 5.5, pero 5,
extr_plas 4, mito 2.5, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222864)
HIX0222864
HIT000316915 (
NM_001012642
)
(GRAM domain-containing protein 2.)
genome : 72,452,147 - 72,490,136 (37,990)
query : 1 - 3,292 (3,292/3,318)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 7.83333, nucl 7.5, cyto 7, plas 6.5,
cyto_mito 5.33333, extr_plas 4.5, pero 4, mito 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222864)
HIX0222864
HIT000019927
(
AK095072
)
Representative transcript
(GRAM domain-containing protein 2.)
genome : 72,452,148 - 72,490,126 (37,979)
query : 1 - 3,280 (3,280/3,280)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004182 : GRAM domain
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 7.83333, nucl 7.5, cyto 7, plas 6.5,
cyto_mito 5.33333, extr_plas 4.5, pero 4, mito 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222864)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK040545
Bos
sp. (Cow) : ENSBTAT00000047418
Pongo
sp. (Orangutan) : ENSPPYT00000007802
Pan
sp. (Chimpanzee) : ENSPTRT00000013365
Tetraodon
sp. (Tetraodon) : GSTENT00003739001
Tetraodon
sp. (Tetraodon) : GSTENT00018158001
Takifugu
sp. (Fugu) : SINFRUT00000129011
Takifugu
sp. (Fugu) : SINFRUT00000165470
Rattus
sp. (Rat) : XM_001073229
Macaca
sp. (Macaque) : XM_001091654
Monodelphis
sp. (Opossum) : XM_001371289
Equus
sp. (Horse) : XM_001494921
Gallus
sp. (Chicken) : XM_413709
Danio
sp. (Zebrafish) : XM_682361
Canis
sp. (Dog) : XM_848929
HIX0222864
HIT000118441 (
ENST00000309731
)
(GRAM domain-containing protein 2.)
genome : 72,452,148 - 72,490,126 (37,979)
query : 1 - 3,281 (3,281/3,281)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 7.83333, nucl 7.5, cyto 7, plas 6.5,
cyto_mito 5.33333, extr_plas 4.5, pero 4, mito 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222864)
HIX0012404
HIT000089895
(
BC019265
)
(Pyruvate kinase family protein.)
genome : 72,491,372 - 72,501,233 (9,862)
query : 1 - 1,651 (1,651/1,744)
6 exons
identity = 0.995
3'(1.000;1.000;1.000;1.000;0.974;0.986)5'
coverage = 0.947
InterPro :
IPR001697 : Pyruvate kinase
IPR015793 : Pyruvate kinase, barrel
IPR015794 : Pyruvate kinase, alpha/beta
IPR015795 : Pyruvate kinase, C-terminal
IPR015813 : Pyruvate/Phosphoenolpyruvate kinase-like domain
GO :
0000287 : Molecular Function : magnesium ion binding
0003824 : Molecular Function : catalytic activity
0004743 : Molecular Function : pyruvate kinase activity
0006096 : Biological Process : glycolytic process
0030955 : Molecular Function : potassium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 25, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012404)
HIX0012404
HIT000093940
(
BC035487
)
(Pyruvate kinase isozymes M1/M2 isoform b.)
genome : 72,491,370 - 72,496,900 (5,531)
query : 1 - 3,005 (3,005/3,057)
3 exons
identity = 0.996
3'(1.000;1.000;0.995)5'
coverage = 1.000
EC number :
EC 2.7.1.40
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00230 : Purine metabolism (100)
00620 : Pyruvate metabolism (62)
00710 : Carbon fixation in photosynthetic organisms (25)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR001697 : Pyruvate kinase
IPR015794 : Pyruvate kinase, alpha/beta
IPR015795 : Pyruvate kinase, C-terminal
GO :
0000287 : Molecular Function : magnesium ion binding
0004743 : Molecular Function : pyruvate kinase activity
0006096 : Biological Process : glycolytic process
0030955 : Molecular Function : potassium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 9.33333, cyto 9, cysk 9, nucl 6.5,
cyto_plas 5.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012404)
HIX0012404
HIT000062769
(
AF025439
)
(Pyruvate kinase isozymes M1/M2; EC=2.7.1.40; Cytosolic thyroid hormone-binding protein; CTHBP; Opa-interacting protein 3; OIP-3; Pyruvate kinase 2/3; Pyruvate kinase muscle isozyme; Thyroid hormone-binding protein 1; THBP1; Tumor M2-PK; p58;)
genome : 72,491,372 - 72,499,107 (7,736)
query : 1 - 1,115 (1,115/1,158)
4 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.40
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00230 : Purine metabolism (100)
00620 : Pyruvate metabolism (62)
00710 : Carbon fixation in photosynthetic organisms (25)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR001697 : Pyruvate kinase
IPR015794 : Pyruvate kinase, alpha/beta
IPR015795 : Pyruvate kinase, C-terminal
GO :
0000287 : Molecular Function : magnesium ion binding
0004743 : Molecular Function : pyruvate kinase activity
0006096 : Biological Process : glycolytic process
0030955 : Molecular Function : potassium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 9.5, cyto 9, nucl 8, cysk 8, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012404)
HIX0012404
HIT000090803
(
BC023592
)
(Pyruvate kinase isozymes M1/M2 isoform b.)
genome : 72,491,372 - 72,523,493 (32,122)
query : 1 - 2,265 (2,265/2,305)
11 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;0.974;0.985;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.40
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00230 : Purine metabolism (100)
00620 : Pyruvate metabolism (62)
00710 : Carbon fixation in photosynthetic organisms (25)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR001697 : Pyruvate kinase
IPR011037 : Pyruvate kinase-like, insert domain
IPR015793 : Pyruvate kinase, barrel
IPR015794 : Pyruvate kinase, alpha/beta
IPR015795 : Pyruvate kinase, C-terminal
IPR015806 : Pyruvate kinase, beta-barrel insert domain
IPR015813 : Pyruvate/Phosphoenolpyruvate kinase-like domain
IPR018209 : Pyruvate kinase, active site
GO :
0000287 : Molecular Function : magnesium ion binding
0003824 : Molecular Function : catalytic activity
0004743 : Molecular Function : pyruvate kinase activity
0006096 : Biological Process : glycolytic process
0030955 : Molecular Function : potassium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 14.8333, cyto_plas 12.8333,
nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012404)
HIX0012404
HIT000033349
(
BC007640
)
(Pyruvate kinase isozymes M1/M2; EC=2.7.1.40; Cytosolic thyroid hormone-binding protein; CTHBP; Opa-interacting protein 3; OIP-3; Pyruvate kinase 2/3; Pyruvate kinase muscle isozyme; Thyroid hormone-binding protein 1; THBP1; Tumor M2-PK; p58;)
genome : 72,491,372 - 72,523,531 (32,160)
query : 1 - 2,303 (2,303/2,332)
11 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;0.974;0.985;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.40
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00230 : Purine metabolism (100)
00620 : Pyruvate metabolism (62)
00710 : Carbon fixation in photosynthetic organisms (25)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR001697 : Pyruvate kinase
IPR011037 : Pyruvate kinase-like, insert domain
IPR015793 : Pyruvate kinase, barrel
IPR015794 : Pyruvate kinase, alpha/beta
IPR015795 : Pyruvate kinase, C-terminal
IPR015806 : Pyruvate kinase, beta-barrel insert domain
IPR015813 : Pyruvate/Phosphoenolpyruvate kinase-like domain
IPR018209 : Pyruvate kinase, active site
GO :
0000287 : Molecular Function : magnesium ion binding
0003824 : Molecular Function : catalytic activity
0004743 : Molecular Function : pyruvate kinase activity
0006096 : Biological Process : glycolytic process
0030955 : Molecular Function : potassium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_plas 13.5, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012404)
HIX0012404
HIT000035967
(
BC012811
)
(Pyruvate kinase isozymes M1/M2 isoform e.)
genome : 72,491,372 - 72,523,543 (32,172)
query : 1 - 2,315 (2,315/2,336)
11 exons
identity = 0.996
3'(0.999;1.000;1.000;1.000;0.974;0.985;1.000;
1.000;1.000;0.994;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.40
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00230 : Purine metabolism (100)
00620 : Pyruvate metabolism (62)
00710 : Carbon fixation in photosynthetic organisms (25)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR001697 : Pyruvate kinase
IPR015793 : Pyruvate kinase, barrel
IPR015794 : Pyruvate kinase, alpha/beta
IPR015795 : Pyruvate kinase, C-terminal
IPR015813 : Pyruvate/Phosphoenolpyruvate kinase-like domain
GO :
0000287 : Molecular Function : magnesium ion binding
0003824 : Molecular Function : catalytic activity
0004743 : Molecular Function : pyruvate kinase activity
0006096 : Biological Process : glycolytic process
0030955 : Molecular Function : potassium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 25, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012404)
HIX0012404
HIT000029665
(
BC000481
)
(Pyruvate kinase isozymes M1/M2; EC=2.7.1.40; Cytosolic thyroid hormone-binding protein; CTHBP; Opa-interacting protein 3; OIP-3; Pyruvate kinase 2/3; Pyruvate kinase muscle isozyme; Thyroid hormone-binding protein 1; THBP1; Tumor M2-PK; p58;)
genome : 72,491,372 - 72,523,547 (32,176)
query : 1 - 2,319 (2,319/2,337)
11 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;0.974;0.985;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.40
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00230 : Purine metabolism (100)
00620 : Pyruvate metabolism (62)
00710 : Carbon fixation in photosynthetic organisms (25)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR001697 : Pyruvate kinase
IPR011037 : Pyruvate kinase-like, insert domain
IPR015793 : Pyruvate kinase, barrel
IPR015794 : Pyruvate kinase, alpha/beta
IPR015795 : Pyruvate kinase, C-terminal
IPR015806 : Pyruvate kinase, beta-barrel insert domain
IPR015813 : Pyruvate/Phosphoenolpyruvate kinase-like domain
IPR018209 : Pyruvate kinase, active site
GO :
0000287 : Molecular Function : magnesium ion binding
0003824 : Molecular Function : catalytic activity
0004743 : Molecular Function : pyruvate kinase activity
0006096 : Biological Process : glycolytic process
0030955 : Molecular Function : potassium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_plas 13.5, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012404)
HIX0012404
HIT000335723
(
BC096823
)
(Pyruvate kinase isozymes M1/M2 isoform c.)
genome : 72,491,372 - 72,523,512 (32,141)
query : 1 - 2,504 (2,504/2,522)
11 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;0.974;0.982;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.40
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00230 : Purine metabolism (100)
00620 : Pyruvate metabolism (62)
00710 : Carbon fixation in photosynthetic organisms (25)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR001697 : Pyruvate kinase
IPR011037 : Pyruvate kinase-like, insert domain
IPR015793 : Pyruvate kinase, barrel
IPR015806 : Pyruvate kinase, beta-barrel insert domain
IPR015813 : Pyruvate/Phosphoenolpyruvate kinase-like domain
GO :
0000287 : Molecular Function : magnesium ion binding
0003824 : Molecular Function : catalytic activity
0004743 : Molecular Function : pyruvate kinase activity
0006096 : Biological Process : glycolytic process
0030955 : Molecular Function : potassium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 20, cyto 18.5, nucl 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012404)
HIX0012404
HIT000199541 (
NM_002654
)
(Pyruvate kinase isozymes M1/M2; EC=2.7.1.40; Cytosolic thyroid hormone-binding protein; CTHBP; Opa-interacting protein 3; OIP-3; Pyruvate kinase 2/3; Pyruvate kinase muscle isozyme; Thyroid hormone-binding protein 1; THBP1; Tumor M2-PK; p58;)
genome : 72,491,370 - 72,523,727 (32,358)
query : 1 - 2,501 (2,501/2,516)
11 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;0.974;0.985;1.000;
1.000;1.000;1.000;0.996)5'
coverage = 1.000
EC number :
EC 2.7.1.40
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00230 : Purine metabolism (100)
00620 : Pyruvate metabolism (62)
00710 : Carbon fixation in photosynthetic organisms (25)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_plas 13.5, nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012404)
HIX0012404
HIT000318570 (
NM_182470
)
(Pyruvate kinase isozymes M1/M2 isoform b.)
genome : 72,491,370 - 72,523,727 (32,358)
query : 1 - 2,717 (2,717/2,732)
11 exons
identity = 0.995
3'(1.000;1.000;1.000;1.000;0.974;0.985;1.000;
1.000;1.000;1.000;0.990)5'
coverage = 1.000
EC number :
EC 2.7.1.40
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00230 : Purine metabolism (100)
00620 : Pyruvate metabolism (62)
00710 : Carbon fixation in photosynthetic organisms (25)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 14.8333, cyto_plas 12.8333,
nucl 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012404)
HIX0012404
HIT000318571 (
NM_182471
)
(Pyruvate kinase isozymes M1/M2 isoform b.)
genome : 72,491,370 - 72,523,727 (32,358)
query : 1 - 2,501 (2,501/2,516)
11 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;0.974;0.985;1.000;
1.000;1.000;1.000;0.996)5'
coverage = 1.000
EC number :
EC 2.7.1.40
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00230 : Purine metabolism (100)
00620 : Pyruvate metabolism (62)
00710 : Carbon fixation in photosynthetic organisms (25)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 14.8333, cyto_plas 12.8333,
nucl 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012404)
HIX0012404
HIT000657306 (
NM_001206796
)
(Pyruvate kinase isozymes M1/M2 isoform c.)
genome : 72,491,370 - 72,523,727 (32,358)
query : 1 - 2,838 (2,838/2,853)
12 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;0.974;0.985;1.000;
1.000;1.000;1.000;1.000;0.998)5'
coverage = 1.000
EC number :
EC 2.7.1.40
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00230 : Purine metabolism (100)
00620 : Pyruvate metabolism (62)
00710 : Carbon fixation in photosynthetic organisms (25)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13, cysk 3, nucl 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012404)
HIX0012404
HIT000657307 (
NM_001206797
)
(Pyruvate kinase isozymes M1/M2; EC=2.7.1.40; Cytosolic thyroid hormone-binding protein; CTHBP; Opa-interacting protein 3; OIP-3; Pyruvate kinase 2/3; Pyruvate kinase muscle isozyme; Thyroid hormone-binding protein 1; THBP1; Tumor M2-PK; p58;)
genome : 72,491,370 - 72,523,727 (32,358)
query : 1 - 2,279 (2,279/2,294)
10 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;0.974;0.985;1.000;
1.000;1.000;0.996)5'
coverage = 1.000
EC number :
EC 2.7.1.40
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00230 : Purine metabolism (100)
00620 : Pyruvate metabolism (62)
00710 : Carbon fixation in photosynthetic organisms (25)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_plas 13, nucl 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012404)
HIX0012404
HIT000657308 (
NM_001206798
)
(Pyruvate kinase isozymes M1/M2 isoform e.)
genome : 72,491,370 - 72,523,727 (32,358)
query : 1 - 2,526 (2,526/2,541)
11 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;0.974;0.985;1.000;
1.000;1.000;1.000;0.996)5'
coverage = 1.000
EC number :
EC 2.7.1.40
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00230 : Purine metabolism (100)
00620 : Pyruvate metabolism (62)
00710 : Carbon fixation in photosynthetic organisms (25)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto 6.5, cyto_nucl 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012404)
HIX0012404
HIT000051345
(
BC035198
)
(Pyruvate kinase isozymes M1/M2; EC=2.7.1.40; Cytosolic thyroid hormone-binding protein; CTHBP; Opa-interacting protein 3; OIP-3; Pyruvate kinase 2/3; Pyruvate kinase muscle isozyme; Thyroid hormone-binding protein 1; THBP1; Tumor M2-PK; p58;)
genome : 72,491,370 - 72,523,497 (32,128)
query : 1 - 2,271 (2,271/2,286)
11 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;0.974;0.982;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.40
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00230 : Purine metabolism (100)
00620 : Pyruvate metabolism (62)
00710 : Carbon fixation in photosynthetic organisms (25)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR001697 : Pyruvate kinase
IPR011037 : Pyruvate kinase-like, insert domain
IPR015793 : Pyruvate kinase, barrel
IPR015806 : Pyruvate kinase, beta-barrel insert domain
IPR015813 : Pyruvate/Phosphoenolpyruvate kinase-like domain
IPR018209 : Pyruvate kinase, active site
GO :
0000287 : Molecular Function : magnesium ion binding
0003824 : Molecular Function : catalytic activity
0004743 : Molecular Function : pyruvate kinase activity
0006096 : Biological Process : glycolytic process
0030955 : Molecular Function : potassium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 14.1667, cyto_plas 12.8333, mito 2,
pero 2, cysk 2, mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012404)
HIX0012404
HIT000657309 (
NM_001206799
)
(Pyruvate kinase isozymes M1/M2 isoform f.)
genome : 72,491,370 - 72,522,063 (30,694)
query : 1 - 2,406 (2,406/2,421)
11 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;0.974;0.985;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.40
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00230 : Purine metabolism (100)
00620 : Pyruvate metabolism (62)
00710 : Carbon fixation in photosynthetic organisms (25)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_plas 13.5, mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012404)
HIX0012404
HIT000335068
(
BC094767
)
(Pyruvate kinase isozymes M1/M2 isoform f.)
genome : 72,491,372 - 72,524,163 (32,792)
query : 1 - 1,864 (1,864/1,879)
8 exons
identity = 0.995
3'(0.999;1.000;1.000;1.000;0.974;0.982;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.40
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00230 : Purine metabolism (100)
00620 : Pyruvate metabolism (62)
00710 : Carbon fixation in photosynthetic organisms (25)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR001697 : Pyruvate kinase
IPR015793 : Pyruvate kinase, barrel
IPR015794 : Pyruvate kinase, alpha/beta
IPR015795 : Pyruvate kinase, C-terminal
IPR015813 : Pyruvate/Phosphoenolpyruvate kinase-like domain
IPR018209 : Pyruvate kinase, active site
GO :
0000287 : Molecular Function : magnesium ion binding
0003824 : Molecular Function : catalytic activity
0004743 : Molecular Function : pyruvate kinase activity
0006096 : Biological Process : glycolytic process
0030955 : Molecular Function : potassium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14.5, nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012404)
HIX0012404
HIT000050796
(
BC023328
)
(Pyruvate kinase family protein.)
genome : 72,491,372 - 72,502,050 (10,679)
query : 1 - 1,687 (1,687/1,702)
7 exons
identity = 0.995
3'(1.000;1.000;1.000;1.000;0.974;0.985;1.000)5'
coverage = 1.000
InterPro :
IPR001697 : Pyruvate kinase
IPR015793 : Pyruvate kinase, barrel
IPR015794 : Pyruvate kinase, alpha/beta
IPR015795 : Pyruvate kinase, C-terminal
IPR015813 : Pyruvate/Phosphoenolpyruvate kinase-like domain
GO :
0000287 : Molecular Function : magnesium ion binding
0003824 : Molecular Function : catalytic activity
0004743 : Molecular Function : pyruvate kinase activity
0006096 : Biological Process : glycolytic process
0030955 : Molecular Function : potassium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 25, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012404)
HIX0012404
HIT000033553
(
BC007952
)
(Pyruvate kinase isozymes M1/M2; EC=2.7.1.40; Cytosolic thyroid hormone-binding protein; CTHBP; Opa-interacting protein 3; OIP-3; Pyruvate kinase 2/3; Pyruvate kinase muscle isozyme; Thyroid hormone-binding protein 1; THBP1; Tumor M2-PK; p58;)
genome : 72,491,376 - 72,523,543 (32,168)
query : 1 - 2,311 (2,311/2,329)
11 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;0.974;0.985;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.40
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00230 : Purine metabolism (100)
00620 : Pyruvate metabolism (62)
00710 : Carbon fixation in photosynthetic organisms (25)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR001697 : Pyruvate kinase
IPR011037 : Pyruvate kinase-like, insert domain
IPR015793 : Pyruvate kinase, barrel
IPR015794 : Pyruvate kinase, alpha/beta
IPR015795 : Pyruvate kinase, C-terminal
IPR015806 : Pyruvate kinase, beta-barrel insert domain
IPR015813 : Pyruvate/Phosphoenolpyruvate kinase-like domain
IPR018209 : Pyruvate kinase, active site
GO :
0000287 : Molecular Function : magnesium ion binding
0003824 : Molecular Function : catalytic activity
0004743 : Molecular Function : pyruvate kinase activity
0006096 : Biological Process : glycolytic process
0030955 : Molecular Function : potassium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_plas 13.5, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012404)
HIX0012404
HIT000122126 (
ENST00000319622
)
(Pyruvate kinase isozymes M1/M2 isoform b.)
genome : 72,491,370 - 72,523,684 (32,315)
query : 1 - 2,674 (2,674/2,674)
11 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;0.974;0.985;1.000;
1.000;1.000;1.000;0.991)5'
coverage = 1.000
EC number :
EC 2.7.1.40
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00230 : Purine metabolism (100)
00620 : Pyruvate metabolism (62)
00710 : Carbon fixation in photosynthetic organisms (25)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 14.8333, cyto_plas 12.8333,
nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012404)
HIX0012404
HIT000195042
(
M26252
)
(Pyruvate kinase isozymes M1/M2; EC=2.7.1.40; Cytosolic thyroid hormone-binding protein; CTHBP; Opa-interacting protein 3; OIP-3; Pyruvate kinase 2/3; Pyruvate kinase muscle isozyme; Thyroid hormone-binding protein 1; THBP1; Tumor M2-PK; p58;)
genome : 72,491,370 - 72,523,524 (32,155)
query : 8 - 2,306 (2,299/2,306)
11 exons
identity = 0.995
3'(1.000;1.000;1.000;1.000;0.974;0.985;0.995;
0.985;1.000;1.000;0.986)5'
coverage = 0.997
EC number :
EC 2.7.1.40
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00230 : Purine metabolism (100)
00620 : Pyruvate metabolism (62)
00710 : Carbon fixation in photosynthetic organisms (25)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR001697 : Pyruvate kinase
IPR015793 : Pyruvate kinase, barrel
IPR015794 : Pyruvate kinase, alpha/beta
IPR015795 : Pyruvate kinase, C-terminal
IPR015813 : Pyruvate/Phosphoenolpyruvate kinase-like domain
GO :
0000287 : Molecular Function : magnesium ion binding
0003824 : Molecular Function : catalytic activity
0004743 : Molecular Function : pyruvate kinase activity
0006096 : Biological Process : glycolytic process
0030955 : Molecular Function : potassium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 25, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012404)
HIX0012404
HIT000677561 (
ENST00000564440
)
(Pyruvate kinase isozymes M1/M2; EC=2.7.1.40; Cytosolic thyroid hormone-binding protein; CTHBP; Opa-interacting protein 3; OIP-3; Pyruvate kinase 2/3; Pyruvate kinase muscle isozyme; Thyroid hormone-binding protein 1; THBP1; Tumor M2-PK; p58;)
genome : 72,491,370 - 72,496,900 (5,531)
query : 1 - 3,016 (3,016/3,016)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.40
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00230 : Purine metabolism (100)
00620 : Pyruvate metabolism (62)
00710 : Carbon fixation in photosynthetic organisms (25)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 9.33333, cyto 9, cysk 9, nucl 6.5,
cyto_plas 5.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012404)
HIX0012404
HIT000681842 (
ENST00000568883
)
(Pyruvate kinase isozymes M1/M2 isoform f.)
genome : 72,491,373 - 72,524,164 (32,792)
query : 1 - 1,864 (1,864/1,864)
8 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;0.974;0.982;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.40
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00230 : Purine metabolism (100)
00620 : Pyruvate metabolism (62)
00710 : Carbon fixation in photosynthetic organisms (25)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 14.5, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012404)
HIX0012404
HIT000129419 (
ENST00000335181
)
(Pyruvate kinase isozymes M1/M2; EC=2.7.1.40; Cytosolic thyroid hormone-binding protein; CTHBP; Opa-interacting protein 3; OIP-3; Pyruvate kinase 2/3; Pyruvate kinase muscle isozyme; Thyroid hormone-binding protein 1; THBP1; Tumor M2-PK; p58;)
genome : 72,491,373 - 72,523,547 (32,175)
query : 1 - 2,318 (2,318/2,318)
11 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;0.974;0.985;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.40
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00230 : Purine metabolism (100)
00620 : Pyruvate metabolism (62)
00710 : Carbon fixation in photosynthetic organisms (25)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_plas 13.5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012404)
HIX0012404
HIT000396003 (
ENST00000389093
)
(Pyruvate kinase isozymes M1/M2 isoform b.)
genome : 72,491,373 - 72,523,531 (32,159)
query : 1 - 2,302 (2,302/2,302)
11 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;0.974;0.985;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.40
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00230 : Purine metabolism (100)
00620 : Pyruvate metabolism (62)
00710 : Carbon fixation in photosynthetic organisms (25)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 14.8333, cyto_plas 12.8333,
nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012404)
HIX0012404
HIT000494037
(
AK299413
)
(Pyruvate kinase isozymes M1/M2 isoform f.)
genome : 72,491,373 - 72,523,529 (32,157)
query : 1 - 2,240 (2,240/2,240)
11 exons
identity = 0.992
3'(1.000;1.000;1.000;1.000;0.974;0.985;0.989;
0.920;1.000;0.994;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.40
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00230 : Purine metabolism (100)
00620 : Pyruvate metabolism (62)
00710 : Carbon fixation in photosynthetic organisms (25)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR001697 : Pyruvate kinase
IPR011037 : Pyruvate kinase-like, insert domain
IPR015793 : Pyruvate kinase, barrel
IPR015806 : Pyruvate kinase, beta-barrel insert domain
IPR015813 : Pyruvate/Phosphoenolpyruvate kinase-like domain
IPR018209 : Pyruvate kinase, active site
GO :
0000287 : Molecular Function : magnesium ion binding
0003824 : Molecular Function : catalytic activity
0004743 : Molecular Function : pyruvate kinase activity
0006096 : Biological Process : glycolytic process
0030955 : Molecular Function : potassium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 14.1667, cyto_plas 12.1667,
mito 2, pero 2, cysk 2, mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012404)
HIX0012404
HIT000678273 (
ENST00000565184
)
(Pyruvate kinase isozymes M1/M2 isoform c.)
genome : 72,491,373 - 72,523,512 (32,140)
query : 1 - 2,503 (2,503/2,503)
11 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;0.974;0.985;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.40
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00230 : Purine metabolism (100)
00620 : Pyruvate metabolism (62)
00710 : Carbon fixation in photosynthetic organisms (25)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23.5, cyto_nucl 13, cysk 3, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012404)
HIX0012404
HIT000017236
(
AK092369
)
(Pyruvate kinase isozymes M1/M2 isoform c.)
genome : 72,491,373 - 72,523,499 (32,127)
query : 1 - 2,486 (2,486/2,486)
11 exons
identity = 0.994
3'(0.999;1.000;1.000;0.993;0.974;0.985;1.000;
1.000;0.989;1.000;0.985)5'
coverage = 1.000
EC number :
EC 2.7.1.40
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00230 : Purine metabolism (100)
00620 : Pyruvate metabolism (62)
00710 : Carbon fixation in photosynthetic organisms (25)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR001697 : Pyruvate kinase
IPR011037 : Pyruvate kinase-like, insert domain
IPR015793 : Pyruvate kinase, barrel
IPR015806 : Pyruvate kinase, beta-barrel insert domain
IPR015813 : Pyruvate/Phosphoenolpyruvate kinase-like domain
IPR018209 : Pyruvate kinase, active site
GO :
0000287 : Molecular Function : magnesium ion binding
0003824 : Molecular Function : catalytic activity
0004743 : Molecular Function : pyruvate kinase activity
0006096 : Biological Process : glycolytic process
0030955 : Molecular Function : potassium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 16, nucl 6, extr 2, mito 2, cysk 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012404)
HIX0012404
HIT000194903
(
M23725
)
(Pyruvate kinase family protein.)
genome : 72,491,413 - 72,523,551 (32,139)
query : 1 - 2,284 (2,284/2,287)
11 exons
identity = 0.995
3'(0.999;1.000;1.000;0.993;0.974;0.985;1.000;
1.000;1.000;1.000;0.979)5'
coverage = 0.999
InterPro :
IPR001697 : Pyruvate kinase
IPR011037 : Pyruvate kinase-like, insert domain
IPR015793 : Pyruvate kinase, barrel
IPR015806 : Pyruvate kinase, beta-barrel insert domain
IPR015813 : Pyruvate/Phosphoenolpyruvate kinase-like domain
IPR018209 : Pyruvate kinase, active site
GO :
0000287 : Molecular Function : magnesium ion binding
0003824 : Molecular Function : catalytic activity
0004743 : Molecular Function : pyruvate kinase activity
0006096 : Biological Process : glycolytic process
0030955 : Molecular Function : potassium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 14.1667, cyto_plas 12.8333, mito 2,
pero 2, cysk 2, mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012404)
HIX0012404
HIT000330707
(
AK222927
)
(Pyruvate kinase isozymes M1/M2 isoform e.)
genome : 72,491,428 - 72,523,531 (32,104)
query : 1 - 2,247 (2,247/2,247)
11 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;0.974;0.982;0.995;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.40
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00230 : Purine metabolism (100)
00620 : Pyruvate metabolism (62)
00710 : Carbon fixation in photosynthetic organisms (25)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR001697 : Pyruvate kinase
IPR015793 : Pyruvate kinase, barrel
IPR015794 : Pyruvate kinase, alpha/beta
IPR015795 : Pyruvate kinase, C-terminal
IPR015813 : Pyruvate/Phosphoenolpyruvate kinase-like domain
GO :
0000287 : Molecular Function : magnesium ion binding
0003824 : Molecular Function : catalytic activity
0004743 : Molecular Function : pyruvate kinase activity
0006096 : Biological Process : glycolytic process
0030955 : Molecular Function : potassium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 25, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012404)
HIX0012404
HIT000495424
(
AK300800
)
(Pyruvate kinase isozymes M1/M2 isoform e.)
genome : 72,491,446 - 72,523,531 (32,086)
query : 1 - 2,254 (2,254/2,254)
11 exons
identity = 0.996
3'(0.998;1.000;1.000;1.000;0.974;0.985;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.40
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00230 : Purine metabolism (100)
00620 : Pyruvate metabolism (62)
00710 : Carbon fixation in photosynthetic organisms (25)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR001697 : Pyruvate kinase
IPR011037 : Pyruvate kinase-like, insert domain
IPR015793 : Pyruvate kinase, barrel
IPR015794 : Pyruvate kinase, alpha/beta
IPR015795 : Pyruvate kinase, C-terminal
IPR015806 : Pyruvate kinase, beta-barrel insert domain
IPR015813 : Pyruvate/Phosphoenolpyruvate kinase-like domain
IPR018209 : Pyruvate kinase, active site
GO :
0000287 : Molecular Function : magnesium ion binding
0003824 : Molecular Function : catalytic activity
0004743 : Molecular Function : pyruvate kinase activity
0006096 : Biological Process : glycolytic process
0030955 : Molecular Function : potassium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto 6.5, cyto_nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012404)
HIX0012404
HIT000547835 (
ENST00000449901
)
(Pyruvate kinase isozymes M1/M2 isoform e.)
genome : 72,491,446 - 72,523,531 (32,086)
query : 1 - 2,254 (2,254/2,254)
11 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;0.974;0.985;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.40
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00230 : Purine metabolism (100)
00620 : Pyruvate metabolism (62)
00710 : Carbon fixation in photosynthetic organisms (25)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto 6.5, cyto_nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012404)
HIX0012404
HIT000680138 (
ENST00000567118
)
(Pyruvate kinase isozymes M1/M2 isoform e.)
genome : 72,491,446 - 72,523,531 (32,086)
query : 1 - 2,254 (2,254/2,254)
11 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;0.974;0.985;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.40
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00230 : Purine metabolism (100)
00620 : Pyruvate metabolism (62)
00710 : Carbon fixation in photosynthetic organisms (25)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto 6.5, cyto_nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012404)
HIX0012404
HIT000426721
(
AK307855
)
(Pyruvate kinase isozymes M1/M2 isoform b.)
genome : 72,491,650 - 72,523,564 (31,915)
query : 1 - 2,027 (2,027/2,027)
11 exons
identity = 0.994
3'(1.000;1.000;1.000;1.000;0.974;0.985;0.995;
1.000;1.000;1.000;0.969)5'
coverage = 1.000
EC number :
EC 2.7.1.40
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00230 : Purine metabolism (100)
00620 : Pyruvate metabolism (62)
00710 : Carbon fixation in photosynthetic organisms (25)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR001697 : Pyruvate kinase
IPR011037 : Pyruvate kinase-like, insert domain
IPR015793 : Pyruvate kinase, barrel
IPR015806 : Pyruvate kinase, beta-barrel insert domain
IPR015813 : Pyruvate/Phosphoenolpyruvate kinase-like domain
GO :
0000287 : Molecular Function : magnesium ion binding
0003824 : Molecular Function : catalytic activity
0004743 : Molecular Function : pyruvate kinase activity
0006096 : Biological Process : glycolytic process
0030955 : Molecular Function : potassium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 11.5, cyto_nucl 8.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012404)
HIX0012404
HIT000488939
(
AK294315
)
Representative transcript
(Pyruvate kinase isozymes M1/M2 isoform c.)
genome : 72,491,931 - 72,523,454 (31,524)
query : 1 - 2,004 (2,004/2,004)
12 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;0.974;0.985;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.40
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00230 : Purine metabolism (100)
00620 : Pyruvate metabolism (62)
00710 : Carbon fixation in photosynthetic organisms (25)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR001697 : Pyruvate kinase
IPR011037 : Pyruvate kinase-like, insert domain
IPR015793 : Pyruvate kinase, barrel
IPR015794 : Pyruvate kinase, alpha/beta
IPR015795 : Pyruvate kinase, C-terminal
IPR015806 : Pyruvate kinase, beta-barrel insert domain
IPR015813 : Pyruvate/Phosphoenolpyruvate kinase-like domain
IPR018209 : Pyruvate kinase, active site
GO :
0000287 : Molecular Function : magnesium ion binding
0003824 : Molecular Function : catalytic activity
0004743 : Molecular Function : pyruvate kinase activity
0006096 : Biological Process : glycolytic process
0030955 : Molecular Function : potassium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13, cysk 3, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012404)
Ortholog candidate ( ->
Evola
)
Takifugu
sp. (Fugu) : AB074495
Equus
sp. (Horse) : AB355735
Canis
sp. (Dog) : AF052434
Mus
sp. (Mouse) : AK151724
Danio
sp. (Zebrafish) : BC045421
Rattus
sp. (Rat) : BC061541
Bos
sp. (Cow) : BC102826
Pongo
sp. (Orangutan) : CR925988
Oryzias
sp. (Medaka) : ENSORLT00000016642
Tetraodon
sp. (Tetraodon) : GSTENT00012066001
Gallus
sp. (Chicken) : J00903
Pan
sp. (Chimpanzee) : XM_001175091
Monodelphis
sp. (Opossum) : XM_001371231
HIX0012404
HIT000678244 (
ENST00000565154
)
(Pyruvate kinase isozymes M1/M2 isoform c.)
genome : 72,491,931 - 72,523,454 (31,524)
query : 1 - 2,004 (2,004/2,004)
12 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;0.974;0.985;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.40
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00230 : Purine metabolism (100)
00620 : Pyruvate metabolism (62)
00710 : Carbon fixation in photosynthetic organisms (25)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 13, cysk 3, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012404)
HIX0012404
HIT000428647
(
AK309781
)
(Pyruvate kinase isozymes M1/M2 isoform e.)
genome : 72,491,970 - 72,522,063 (30,094)
query : 3 - 1,808 (1,806/1,808)
11 exons
identity = 0.993
3'(1.000;1.000;1.000;0.987;0.974;0.985;1.000;
0.985;1.000;1.000;1.000)5'
coverage = 0.999
EC number :
EC 2.7.1.40
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00230 : Purine metabolism (100)
00620 : Pyruvate metabolism (62)
00710 : Carbon fixation in photosynthetic organisms (25)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR001697 : Pyruvate kinase
IPR015793 : Pyruvate kinase, barrel
IPR015794 : Pyruvate kinase, alpha/beta
IPR015795 : Pyruvate kinase, C-terminal
IPR015813 : Pyruvate/Phosphoenolpyruvate kinase-like domain
GO :
0000287 : Molecular Function : magnesium ion binding
0003824 : Molecular Function : catalytic activity
0004743 : Molecular Function : pyruvate kinase activity
0006096 : Biological Process : glycolytic process
0030955 : Molecular Function : potassium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 13.5, nucl 10.5, mito 4, cysk 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012404)
HIX0012404
HIT000681438 (
ENST00000568459
)
(Pyruvate kinase isozymes M1/M2 isoform f.)
genome : 72,491,970 - 72,522,063 (30,094)
query : 1 - 1,806 (1,806/1,806)
11 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;0.974;0.985;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.40
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00230 : Purine metabolism (100)
00620 : Pyruvate metabolism (62)
00710 : Carbon fixation in photosynthetic organisms (25)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_plas 13.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012404)
HIX0012404
HIT000431119
(
AK312253
)
(Pyruvate kinase isozymes M1/M2; EC=2.7.1.40; Cytosolic thyroid hormone-binding protein; CTHBP; Opa-interacting protein 3; OIP-3; Pyruvate kinase 2/3; Pyruvate kinase muscle isozyme; Thyroid hormone-binding protein 1; THBP1; Tumor M2-PK; p58;)
genome : 72,491,991 - 72,523,531 (31,541)
query : 1 - 1,684 (1,684/1,684)
11 exons
identity = 0.995
3'(1.000;1.000;1.000;0.993;0.974;0.985;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.40
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00230 : Purine metabolism (100)
00620 : Pyruvate metabolism (62)
00710 : Carbon fixation in photosynthetic organisms (25)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR001697 : Pyruvate kinase
IPR011037 : Pyruvate kinase-like, insert domain
IPR015793 : Pyruvate kinase, barrel
IPR015794 : Pyruvate kinase, alpha/beta
IPR015795 : Pyruvate kinase, C-terminal
IPR015806 : Pyruvate kinase, beta-barrel insert domain
IPR015813 : Pyruvate/Phosphoenolpyruvate kinase-like domain
IPR018209 : Pyruvate kinase, active site
GO :
0000287 : Molecular Function : magnesium ion binding
0003824 : Molecular Function : catalytic activity
0004743 : Molecular Function : pyruvate kinase activity
0006096 : Biological Process : glycolytic process
0030955 : Molecular Function : potassium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_plas 13.5, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012404)
HIX0012404
HIT000427130
(
AK308264
)
(Pyruvate kinase isozymes M1/M2 isoform f.)
genome : 72,492,849 - 72,521,017 (28,169)
query : 1 - 1,568 (1,568/1,568)
10 exons
identity = 0.992
3'(0.993;0.994;1.000;0.974;0.982;1.000;1.000;
0.989;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.40
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00230 : Purine metabolism (100)
00620 : Pyruvate metabolism (62)
00710 : Carbon fixation in photosynthetic organisms (25)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR001697 : Pyruvate kinase
IPR011037 : Pyruvate kinase-like, insert domain
IPR015793 : Pyruvate kinase, barrel
IPR015806 : Pyruvate kinase, beta-barrel insert domain
IPR015813 : Pyruvate/Phosphoenolpyruvate kinase-like domain
IPR018209 : Pyruvate kinase, active site
GO :
0000287 : Molecular Function : magnesium ion binding
0003824 : Molecular Function : catalytic activity
0004743 : Molecular Function : pyruvate kinase activity
0006096 : Biological Process : glycolytic process
0030955 : Molecular Function : potassium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012404)
HIX0012404
HIT000674827 (
ENST00000561609
)
(Pyruvate kinase isozymes M1/M2 isoform b.)
genome : 72,492,849 - 72,521,017 (28,169)
query : 1 - 1,568 (1,568/1,568)
10 exons
identity = 0.995
3'(1.000;1.000;1.000;0.974;0.985;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.40
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00230 : Purine metabolism (100)
00620 : Pyruvate metabolism (62)
00710 : Carbon fixation in photosynthetic organisms (25)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012404)
HIX0012404
HIT000677123 (
ENST00000563986
)
(Pyruvate kinase isozymes M1/M2; EC=2.7.1.40; Cytosolic thyroid hormone-binding protein; CTHBP; Opa-interacting protein 3; OIP-3; Pyruvate kinase 2/3; Pyruvate kinase muscle isozyme; Thyroid hormone-binding protein 1; THBP1; Tumor M2-PK; p58;)
genome : 72,494,208 - 72,499,139 (4,932)
query : 1 - 825 (825/825)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.40
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00230 : Purine metabolism (100)
00620 : Pyruvate metabolism (62)
00710 : Carbon fixation in photosynthetic organisms (25)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 14, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012404)
HIX0012404
HIT000682783 (
ENST00000569857
)
(Pyruvate kinase isozymes M1/M2; EC=2.7.1.40; Cytosolic thyroid hormone-binding protein; CTHBP; Opa-interacting protein 3; OIP-3; Pyruvate kinase 2/3; Pyruvate kinase muscle isozyme; Thyroid hormone-binding protein 1; THBP1; Tumor M2-PK; p58;)
genome : 72,494,874 - 72,523,566 (28,693)
query : 1 - 1,355 (1,355/1,355)
9 exons
identity = 0.997
3'(1.000;1.000;0.974;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.7.1.40
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00230 : Purine metabolism (100)
00620 : Pyruvate metabolism (62)
00710 : Carbon fixation in photosynthetic organisms (25)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 16.6667, cyto_plas 13.5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012404)
HIX0012405
HIT000250620
(
AL390093
)
(Poly [ADP-ribose] polymerase 6; PARP-6; EC=2.4.2.30; ADP-ribosyltransferase diphtheria toxin-like 17; ARTD17;)
genome : 72,533,523 - 72,548,847 (15,325)
query : 1 - 1,016 (1,016/1,051)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.998
EC number :
EC 2.4.2.30
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 9, cyto_nucl 8.5, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000024879
(
AL122091
)
(Poly [ADP-ribose] polymerase 6; PARP-6; EC=2.4.2.30; ADP-ribosyltransferase diphtheria toxin-like 17; ARTD17;)
genome : 72,533,522 - 72,557,802 (24,281)
query : 3 - 1,981 (1,979/2,000)
19 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.995;1.000;1.000;1.000;1.000)5'
coverage = 0.999
EC number :
EC 2.4.2.30
InterPro :
IPR012317 : Poly(ADP-ribose) polymerase, catalytic domain
GO :
0003950 : Molecular Function : NAD+ ADP-ribosyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18, nucl 17.5, cyto 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000037034
(
BC015176
)
(Poly [ADP-ribose] polymerase 6; PARP-6; EC=2.4.2.30; ADP-ribosyltransferase diphtheria toxin-like 17; ARTD17;)
genome : 72,533,522 - 72,545,813 (12,292)
query : 1 - 764 (764/779)
7 exons
identity = 0.997
3'(0.995;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.2.30
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 9, cyto_nucl 8.5, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000088616
(
BC015314
)
(Poly(ADP-ribose) polymerase, catalytic domain containing protein.)
genome : 72,533,539 - 72,558,271 (24,733)
query : 1 - 1,951 (1,951/1,980)
20 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.994;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR012317 : Poly(ADP-ribose) polymerase, catalytic domain
GO :
0003950 : Molecular Function : NAD+ ADP-ribosyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 16, cyto 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000040236
(
BC026955
)
(Poly [ADP-ribose] polymerase 6; PARP-6; EC=2.4.2.30; ADP-ribosyltransferase diphtheria toxin-like 17; ARTD17;)
genome : 72,533,539 - 72,558,270 (24,732)
query : 1 - 1,877 (1,877/1,902)
19 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.994;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.2.30
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 9, cyto_nucl 8.5, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000207806 (
NM_020214
)
(Poly [ADP-ribose] polymerase 6; PARP-6; EC=2.4.2.30; ADP-ribosyltransferase diphtheria toxin-like 17; ARTD17;)
genome : 72,533,522 - 72,563,628 (30,107)
query : 1 - 2,626 (2,626/2,631)
23 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.998
EC number :
EC 2.4.2.30
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15, cyto 8.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000339792
(
BC110902
)
Representative transcript
(Poly [ADP-ribose] polymerase 6; PARP-6; EC=2.4.2.30; ADP-ribosyltransferase diphtheria toxin-like 17; ARTD17;)
genome : 72,533,522 - 72,559,864 (26,343)
query : 3 - 2,215 (2,213/2,220)
22 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.995;1.000;1.000;1.000;1.000;1.000;1.000;
0.940)5'
coverage = 0.997
EC number :
EC 2.4.2.30
InterPro :
IPR012317 : Poly(ADP-ribose) polymerase, catalytic domain
GO :
0003950 : Molecular Function : NAD+ ADP-ribosyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB169206
Mus
sp. (Mouse) : BC052064
Gallus
sp. (Chicken) : CR390771
Pongo
sp. (Orangutan) : CR857803
Oryzias
sp. (Medaka) : ENSORLT00000016750
Tetraodon
sp. (Tetraodon) : GSTENT00012067001
Takifugu
sp. (Fugu) : SINFRUT00000141036
Rattus
sp. (Rat) : XM_001073042
Monodelphis
sp. (Opossum) : XM_001371209
Equus
sp. (Horse) : XM_001494491
Danio
sp. (Zebrafish) : XM_001923876
Canis
sp. (Dog) : XM_861810
Pan
sp. (Chimpanzee) : XR_024816
HIX0012405
HIT000682726 (
ENST00000569795
)
(Poly [ADP-ribose] polymerase 6; PARP-6; EC=2.4.2.30; ADP-ribosyltransferase diphtheria toxin-like 17; ARTD17;)
genome : 72,533,522 - 72,564,962 (31,441)
query : 1 - 2,855 (2,855/2,855)
24 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.2.30
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000250617
(
AL390087
)
(Conserved hypothetical protein.)
genome : 72,533,539 - 72,559,369 (25,831)
query : 1 - 2,342 (2,342/2,359)
22 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994;1.000;1.000;1.000;1.000;1.000;
0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 14.5, nucl 12, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000682120 (
ENST00000569173
)
(Poly [ADP-ribose] polymerase 6; PARP-6; EC=2.4.2.30; ADP-ribosyltransferase diphtheria toxin-like 17; ARTD17;)
genome : 72,533,522 - 72,552,964 (19,443)
query : 1 - 516 (516/516)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.2.30
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, nucl 4.5, cyto_nucl 4, extr 3, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000007977
(
AK024703
)
(Poly [ADP-ribose] polymerase 6; PARP-6; EC=2.4.2.30; ADP-ribosyltransferase diphtheria toxin-like 17; ARTD17;)
genome : 72,533,539 - 72,549,757 (16,219)
query : 1 - 1,150 (1,150/1,167)
11 exons
identity = 0.997
3'(0.997;1.000;0.984;1.000;1.000;1.000;1.000;
1.000;0.985;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.2.30
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 9, cyto_nucl 8.5, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000107707 (
ENST00000260376
)
(Poly [ADP-ribose] polymerase 6; PARP-6; EC=2.4.2.30; ADP-ribosyltransferase diphtheria toxin-like 17; ARTD17;)
genome : 72,533,523 - 72,563,628 (30,106)
query : 1 - 2,555 (2,555/2,555)
22 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 2.4.2.30
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000112828 (
ENST00000287196
)
(Poly [ADP-ribose] polymerase 6; PARP-6; EC=2.4.2.30; ADP-ribosyltransferase diphtheria toxin-like 17; ARTD17;)
genome : 72,533,523 - 72,563,628 (30,106)
query : 1 - 2,625 (2,625/2,625)
23 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.2.30
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000046289
(
AK126416
)
(Poly [ADP-ribose] polymerase 6; PARP-6; EC=2.4.2.30; ADP-ribosyltransferase diphtheria toxin-like 17; ARTD17;)
genome : 72,533,523 - 72,559,990 (26,468)
query : 2 - 2,751 (2,750/2,751)
19 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.992;1.000;1.000;1.000;0.994;1.000;
1.000;1.000;0.984;1.000;0.998)5'
coverage = 1.000
EC number :
EC 2.4.2.30
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 9, cyto_nucl 8.5, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000511031 (
ENST00000413097
)
(Poly [ADP-ribose] polymerase 6; PARP-6; EC=2.4.2.30; ADP-ribosyltransferase diphtheria toxin-like 17; ARTD17;)
genome : 72,533,523 - 72,559,990 (26,468)
query : 1 - 2,750 (2,750/2,750)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.994;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.2.30
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 9, cyto_nucl 8.5, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000005064
(
AK021790
)
(Poly [ADP-ribose] polymerase 6; PARP-6; EC=2.4.2.30; ADP-ribosyltransferase diphtheria toxin-like 17; ARTD17;)
genome : 72,533,528 - 72,559,912 (26,385)
query : 1 - 1,332 (1,332/1,332)
13 exons
identity = 0.995
3'(1.000;0.952;1.000;1.000;0.981;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.2.30
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000682893 (
ENST00000569972
)
(Poly [ADP-ribose] polymerase 6; PARP-6; EC=2.4.2.30; ADP-ribosyltransferase diphtheria toxin-like 17; ARTD17;)
genome : 72,533,538 - 72,542,606 (9,069)
query : 1 - 836 (836/836)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.2.30
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 9, cyto_nucl 8.5, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000005821
(
AK022547
)
(Poly [ADP-ribose] polymerase 6; PARP-6; EC=2.4.2.30; ADP-ribosyltransferase diphtheria toxin-like 17; ARTD17;)
genome : 72,533,540 - 72,563,392 (29,853)
query : 1 - 2,305 (2,305/2,305)
22 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.979;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 2.4.2.30
InterPro :
IPR012317 : Poly(ADP-ribose) polymerase, catalytic domain
GO :
0003950 : Molecular Function : NAD+ ADP-ribosyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 6.5, cyto_nucl 6.5, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000678522 (
ENST00000565443
)
(Poly [ADP-ribose] polymerase 6; PARP-6; EC=2.4.2.30; ADP-ribosyltransferase diphtheria toxin-like 17; ARTD17;)
genome : 72,533,540 - 72,563,392 (29,853)
query : 1 - 2,305 (2,305/2,305)
22 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 2.4.2.30
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000643565 (
ENST00000544520
)
(Conserved hypothetical protein.)
genome : 72,533,540 - 72,559,369 (25,830)
query : 1 - 2,341 (2,341/2,341)
22 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 14.5, nucl 12, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000680965 (
ENST00000567974
)
(Poly(ADP-ribose) polymerase, catalytic domain containing protein.)
genome : 72,533,540 - 72,558,271 (24,732)
query : 1 - 1,950 (1,950/1,950)
20 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.994;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 16, cyto 13.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000677724 (
ENST00000564610
)
(Poly [ADP-ribose] polymerase 6; PARP-6; EC=2.4.2.30; ADP-ribosyltransferase diphtheria toxin-like 17; ARTD17;)
genome : 72,533,540 - 72,558,270 (24,731)
query : 1 - 1,876 (1,876/1,876)
19 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.994;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.2.30
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 9, cyto_nucl 8.5, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000680449 (
ENST00000567440
)
(Poly [ADP-ribose] polymerase 6; PARP-6; EC=2.4.2.30; ADP-ribosyltransferase diphtheria toxin-like 17; ARTD17;)
genome : 72,533,564 - 72,563,556 (29,993)
query : 1 - 2,271 (2,271/2,271)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.2.30
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 9, plas 2, extr 2, cysk 2, extr_plas 2,
cysk_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000680278 (
ENST00000567263
)
(Conserved hypothetical protein.)
genome : 72,533,616 - 72,549,761 (16,146)
query : 1 - 845 (845/845)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 9, cyto_nucl 8.5, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000679858 (
ENST00000566831
)
(Poly [ADP-ribose] polymerase 6; PARP-6; EC=2.4.2.30; ADP-ribosyltransferase diphtheria toxin-like 17; ARTD17;)
genome : 72,533,628 - 72,543,692 (10,065)
query : 1 - 718 (718/718)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.2.30
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 9, cyto_nucl 8.5, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000388007
(
BC119688
)
(Poly [ADP-ribose] polymerase 6; PARP-6; EC=2.4.2.30; ADP-ribosyltransferase diphtheria toxin-like 17; ARTD17;)
genome : 72,534,961 - 72,559,877 (24,917)
query : 1 - 1,703 (1,703/1,721)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.990
EC number :
EC 2.4.2.30
InterPro :
IPR012317 : Poly(ADP-ribose) polymerase, catalytic domain
GO :
0003950 : Molecular Function : NAD+ ADP-ribosyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000388008
(
BC119689
)
(Poly [ADP-ribose] polymerase 6; PARP-6; EC=2.4.2.30; ADP-ribosyltransferase diphtheria toxin-like 17; ARTD17;)
genome : 72,534,961 - 72,559,877 (24,917)
query : 1 - 1,703 (1,703/1,720)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.990
EC number :
EC 2.4.2.30
InterPro :
IPR012317 : Poly(ADP-ribose) polymerase, catalytic domain
GO :
0003950 : Molecular Function : NAD+ ADP-ribosyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000517673 (
ENST00000419739
)
(Poly [ADP-ribose] polymerase 6; PARP-6; EC=2.4.2.30; ADP-ribosyltransferase diphtheria toxin-like 17; ARTD17;)
genome : 72,534,961 - 72,559,877 (24,917)
query : 1 - 1,703 (1,703/1,718)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.991
EC number :
EC 2.4.2.30
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000680063 (
ENST00000567042
)
(Poly [ADP-ribose] polymerase 6; PARP-6; EC=2.4.2.30; ADP-ribosyltransferase diphtheria toxin-like 17; ARTD17;)
genome : 72,534,961 - 72,546,822 (11,862)
query : 1 - 601 (601/601)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 2.4.2.30
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 12.5, nucl 5.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000660457
(
AB499727
)
(Poly [ADP-ribose] polymerase 6; PARP-6; EC=2.4.2.30; ADP-ribosyltransferase diphtheria toxin-like 17; ARTD17;)
genome : 72,534,975 - 72,559,164 (24,190)
query : 3 - 1,557 (1,555/1,557)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.999
EC number :
EC 2.4.2.30
InterPro :
IPR012317 : Poly(ADP-ribose) polymerase, catalytic domain
GO :
0003950 : Molecular Function : NAD+ ADP-ribosyltransferase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000682816 (
ENST00000569890
)
(Poly [ADP-ribose] polymerase 6; PARP-6; EC=2.4.2.30; ADP-ribosyltransferase diphtheria toxin-like 17; ARTD17;)
genome : 72,535,015 - 72,549,776 (14,762)
query : 1 - 304 (304/304)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.2.30
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 21, cyto 6, cyto_nucl 5, nucl 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000660458
(
AB499728
)
(Poly [ADP-ribose] polymerase 6; PARP-6; EC=2.4.2.30; ADP-ribosyltransferase diphtheria toxin-like 17; ARTD17;)
genome : 72,543,548 - 72,559,164 (15,617)
query : 3 - 1,308 (1,306/1,323)
14 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.979;1.000)5'
coverage = 0.987
EC number :
EC 2.4.2.30
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 9, plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000679051 (
ENST00000565999
)
(Poly [ADP-ribose] polymerase 6; PARP-6; EC=2.4.2.30; ADP-ribosyltransferase diphtheria toxin-like 17; ARTD17;)
genome : 72,552,935 - 72,559,123 (6,189)
query : 1 - 740 (740/740)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.2.30
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto 10, cysk 6, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000681341 (
ENST00000568360
)
(Poly [ADP-ribose] polymerase 6; PARP-6; EC=2.4.2.30; ADP-ribosyltransferase diphtheria toxin-like 17; ARTD17;)
genome : 72,557,770 - 72,565,340 (7,571)
query : 1 - 596 (596/596)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.2.30
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 11.5, extr 10, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000426939
(
AK308073
)
(CUGBP Elav-like family member 6; CELF-6; Bruno-like protein 6; CUG-BP- and ETR-3-like factor 6; RNA-binding protein BRUNOL-6;)
genome : 72,559,087 - 72,612,287 (53,201)
query : 1 - 1,901 (1,901/1,901)
15 exons
identity = 0.999
3'(1.000;1.000;0.988;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.997)5'
coverage = 1.000
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, mito 5.5, mito_pero 5.5, cyto_plas 5.5,
cyto_golg 5.5, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000682486 (
ENST00000569547
)
(CUGBP Elav-like family member 6; CELF-6; Bruno-like protein 6; CUG-BP- and ETR-3-like factor 6; RNA-binding protein BRUNOL-6;)
genome : 72,559,087 - 72,612,287 (53,201)
query : 1 - 1,902 (1,902/1,902)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, cyto_nucl 9.5, nucl 6, mito_pero 4.83333,
E.R._mito 4.16667, pero 4, mito 3.5, E.R. 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000329369
(
AB209434
)
(Beta-hexosaminidase subunit alpha; EC=3.2.1.52; Beta-N-acetylhexosaminidase subunit alpha; Hexosaminidase subunit A; N-acetyl-beta-glucosaminidase subunit alpha; Precursor;)
genome : 72,577,068 - 72,668,322 (91,255)
query : 1 - 4,374 (4,374/4,374)
16 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.990;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.52
KEGG pathway :
00511 : Other glycan degradation (9)
00513 : Various types of N-glycan biosynthesis (22)
00520 : Amino sugar and nucleotide sugar metabolism (92)
00531 : Glycosaminoglycan degradation (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
00604 : Glycosphingolipid biosynthesis - ganglio series (8)
01100 : Metabolic pathways (1346)
InterPro :
IPR000504 : RNA recognition motif domain
IPR012677 : Nucleotide-binding alpha-beta plait domain
GO :
0000166 : Molecular Function : nucleotide binding
0003676 : Molecular Function : nucleic acid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 9.5, cyto_nucl 8, pero 6.5, plas 5.5, nucl 5.5,
mito_pero 5, extr_plas 4, mito 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB169218
Mus
sp. (Mouse) : BC052406
Tetraodon
sp. (Tetraodon) : CR698110
Gallus
sp. (Chicken) : EF520347
Oryzias
sp. (Medaka) : ENSORLT00000005784
Pongo
sp. (Orangutan) : ENSPPYT00000007807
Takifugu
sp. (Fugu) : SINFRUT00000141224
Danio
sp. (Zebrafish) : XM_001334944
Monodelphis
sp. (Opossum) : XM_001371189
Rattus
sp. (Rat) : XM_236307
Bos
sp. (Cow) : XM_585599
Canis
sp. (Dog) : XM_848961
Pan
sp. (Chimpanzee) : XR_021902
HIX0012405
HIT000361194 (
ENST00000379915
)
(Beta-hexosaminidase subunit alpha; EC=3.2.1.52; Beta-N-acetylhexosaminidase subunit alpha; Hexosaminidase subunit A; N-acetyl-beta-glucosaminidase subunit alpha; Precursor;)
genome : 72,577,068 - 72,668,322 (91,255)
query : 1 - 4,374 (4,374/4,374)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.52
KEGG pathway :
00511 : Other glycan degradation (9)
00513 : Various types of N-glycan biosynthesis (22)
00520 : Amino sugar and nucleotide sugar metabolism (92)
00531 : Glycosaminoglycan degradation (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
00604 : Glycosphingolipid biosynthesis - ganglio series (8)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 9.5, cyto_nucl 8, pero 6.5, plas 5.5, nucl 5.5,
mito_pero 5, extr_plas 4, mito 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000110252 (
ENST00000268097
)
(Beta-hexosaminidase subunit alpha; EC=3.2.1.52; Beta-N-acetylhexosaminidase subunit alpha; Hexosaminidase subunit A; N-acetyl-beta-glucosaminidase subunit alpha; Precursor;)
genome : 72,635,775 - 72,668,817 (33,043)
query : 1 - 2,737 (2,737/2,737)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.52
KEGG pathway :
00511 : Other glycan degradation (9)
00513 : Various types of N-glycan biosynthesis (22)
00520 : Amino sugar and nucleotide sugar metabolism (92)
00531 : Glycosaminoglycan degradation (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
00604 : Glycosphingolipid biosynthesis - ganglio series (8)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 15, cyto_mito 9, extr 8, lyso 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000197555 (
NM_000520
)
(Beta-hexosaminidase subunit alpha; EC=3.2.1.52; Beta-N-acetylhexosaminidase subunit alpha; Hexosaminidase subunit A; N-acetyl-beta-glucosaminidase subunit alpha; Precursor;)
genome : 72,635,778 - 72,668,520 (32,743)
query : 1 - 2,437 (2,437/2,437)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.52
KEGG pathway :
00511 : Other glycan degradation (9)
00513 : Various types of N-glycan biosynthesis (22)
00520 : Amino sugar and nucleotide sugar metabolism (92)
00531 : Glycosaminoglycan degradation (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
00604 : Glycosphingolipid biosynthesis - ganglio series (8)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 15, cyto_mito 9, extr 8, lyso 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000194222
(
M13520
)
(Beta-hexosaminidase subunit alpha; EC=3.2.1.52; Beta-N-acetylhexosaminidase subunit alpha; Hexosaminidase subunit A; N-acetyl-beta-glucosaminidase subunit alpha; Precursor;)
genome : 72,635,779 - 72,668,197 (32,419)
query : 1 - 2,113 (2,113/2,113)
14 exons
identity = 0.998
3'(0.997;0.990;1.000;0.995;0.986;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.52
KEGG pathway :
00511 : Other glycan degradation (9)
00513 : Various types of N-glycan biosynthesis (22)
00520 : Amino sugar and nucleotide sugar metabolism (92)
00531 : Glycosaminoglycan degradation (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
00604 : Glycosphingolipid biosynthesis - ganglio series (8)
01100 : Metabolic pathways (1346)
InterPro :
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015883 : Glycoside hydrolase family 20, catalytic core
IPR017853 : Glycoside hydrolase superfamily
IPR025705 : Beta-hexosaminidase
IPR029018 : Chitobiase/beta-hexosaminidase domain 2-like
IPR029019 : Beta-hexosaminidase, eukaryotic type, N-terminal
GO :
0004553 : Molecular Function : hydrolase activity, hydrolyzing O-glycosyl compounds
0004563 : Molecular Function : beta-N-acetylhexosaminidase activity
0005975 : Biological Process : carbohydrate metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, cyto 14, nucl 11, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000266046
(
BC084537
)
(Beta-hexosaminidase subunit alpha; EC=3.2.1.52; Beta-N-acetylhexosaminidase subunit alpha; Hexosaminidase subunit A; N-acetyl-beta-glucosaminidase subunit alpha; Precursor;)
genome : 72,636,231 - 72,668,320 (32,090)
query : 1 - 1,784 (1,784/1,831)
14 exons
identity = 0.999
3'(1.000;0.990;1.000;0.995;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.52
KEGG pathway :
00511 : Other glycan degradation (9)
00513 : Various types of N-glycan biosynthesis (22)
00520 : Amino sugar and nucleotide sugar metabolism (92)
00531 : Glycosaminoglycan degradation (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
00604 : Glycosphingolipid biosynthesis - ganglio series (8)
01100 : Metabolic pathways (1346)
InterPro :
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015883 : Glycoside hydrolase family 20, catalytic core
IPR017853 : Glycoside hydrolase superfamily
IPR025705 : Beta-hexosaminidase
IPR029018 : Chitobiase/beta-hexosaminidase domain 2-like
IPR029019 : Beta-hexosaminidase, eukaryotic type, N-terminal
GO :
0004553 : Molecular Function : hydrolase activity, hydrolyzing O-glycosyl compounds
0004563 : Molecular Function : beta-N-acetylhexosaminidase activity
0005975 : Biological Process : carbohydrate metabolic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 15, cyto_mito 9, extr 8, lyso 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000330282
(
AK222502
)
(Beta-hexosaminidase subunit alpha; EC=3.2.1.52; Beta-N-acetylhexosaminidase subunit alpha; Hexosaminidase subunit A; N-acetyl-beta-glucosaminidase subunit alpha; Precursor;)
genome : 72,636,231 - 72,668,327 (32,097)
query : 1 - 1,791 (1,791/1,811)
14 exons
identity = 0.998
3'(1.000;0.990;1.000;0.989;1.000;0.989;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.52
KEGG pathway :
00511 : Other glycan degradation (9)
00513 : Various types of N-glycan biosynthesis (22)
00520 : Amino sugar and nucleotide sugar metabolism (92)
00531 : Glycosaminoglycan degradation (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
00604 : Glycosphingolipid biosynthesis - ganglio series (8)
01100 : Metabolic pathways (1346)
InterPro :
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015883 : Glycoside hydrolase family 20, catalytic core
IPR017853 : Glycoside hydrolase superfamily
IPR025705 : Beta-hexosaminidase
IPR029018 : Chitobiase/beta-hexosaminidase domain 2-like
IPR029019 : Beta-hexosaminidase, eukaryotic type, N-terminal
GO :
0004553 : Molecular Function : hydrolase activity, hydrolyzing O-glycosyl compounds
0004563 : Molecular Function : beta-N-acetylhexosaminidase activity
0005975 : Biological Process : carbohydrate metabolic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 16, cyto_mito 9.5, extr 8, lyso 4, extr_plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000038476
(
BC018927
)
(Beta-hexosaminidase subunit alpha; EC=3.2.1.52; Beta-N-acetylhexosaminidase subunit alpha; Hexosaminidase subunit A; N-acetyl-beta-glucosaminidase subunit alpha; Precursor;)
genome : 72,636,228 - 72,668,324 (32,097)
query : 1 - 1,791 (1,791/1,808)
14 exons
identity = 0.998
3'(1.000;0.990;1.000;0.995;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.996)5'
coverage = 1.000
EC number :
EC 3.2.1.52
KEGG pathway :
00511 : Other glycan degradation (9)
00513 : Various types of N-glycan biosynthesis (22)
00520 : Amino sugar and nucleotide sugar metabolism (92)
00531 : Glycosaminoglycan degradation (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
00604 : Glycosphingolipid biosynthesis - ganglio series (8)
01100 : Metabolic pathways (1346)
InterPro :
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015883 : Glycoside hydrolase family 20, catalytic core
IPR017853 : Glycoside hydrolase superfamily
IPR025705 : Beta-hexosaminidase
IPR029018 : Chitobiase/beta-hexosaminidase domain 2-like
IPR029019 : Beta-hexosaminidase, eukaryotic type, N-terminal
GO :
0004553 : Molecular Function : hydrolase activity, hydrolyzing O-glycosyl compounds
0004563 : Molecular Function : beta-N-acetylhexosaminidase activity
0005975 : Biological Process : carbohydrate metabolic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 15, cyto_mito 9, extr 8, lyso 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000306159
(
CR627386
)
(Beta-hexosaminidase subunit alpha; EC=3.2.1.52; Beta-N-acetylhexosaminidase subunit alpha; Hexosaminidase subunit A; N-acetyl-beta-glucosaminidase subunit alpha; Precursor;)
genome : 72,636,228 - 72,668,814 (32,587)
query : 1 - 2,281 (2,281/2,296)
14 exons
identity = 0.998
3'(1.000;0.990;1.000;0.995;1.000;1.000;1.000;
0.992;1.000;1.000;1.000;1.000;1.000;0.999)5'
coverage = 1.000
EC number :
EC 3.2.1.52
KEGG pathway :
00511 : Other glycan degradation (9)
00513 : Various types of N-glycan biosynthesis (22)
00520 : Amino sugar and nucleotide sugar metabolism (92)
00531 : Glycosaminoglycan degradation (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
00604 : Glycosphingolipid biosynthesis - ganglio series (8)
01100 : Metabolic pathways (1346)
InterPro :
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015883 : Glycoside hydrolase family 20, catalytic core
IPR017853 : Glycoside hydrolase superfamily
IPR025705 : Beta-hexosaminidase
IPR029018 : Chitobiase/beta-hexosaminidase domain 2-like
IPR029019 : Beta-hexosaminidase, eukaryotic type, N-terminal
GO :
0004553 : Molecular Function : hydrolase activity, hydrolyzing O-glycosyl compounds
0004563 : Molecular Function : beta-N-acetylhexosaminidase activity
0005975 : Biological Process : carbohydrate metabolic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 15, cyto_mito 9, extr 8, lyso 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000680422 (
ENST00000567411
)
(Beta-hexosaminidase subunit alpha; EC=3.2.1.52; Beta-N-acetylhexosaminidase subunit alpha; Hexosaminidase subunit A; N-acetyl-beta-glucosaminidase subunit alpha; Precursor;)
genome : 72,636,249 - 72,668,344 (32,096)
query : 1 - 1,743 (1,743/1,743)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.52
KEGG pathway :
00511 : Other glycan degradation (9)
00513 : Various types of N-glycan biosynthesis (22)
00520 : Amino sugar and nucleotide sugar metabolism (92)
00531 : Glycosaminoglycan degradation (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
00604 : Glycosphingolipid biosynthesis - ganglio series (8)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000495624
(
AK301000
)
(Beta-hexosaminidase subunit alpha; EC=3.2.1.52; Beta-N-acetylhexosaminidase subunit alpha; Hexosaminidase subunit A; N-acetyl-beta-glucosaminidase subunit alpha; Precursor;)
genome : 72,636,267 - 72,668,334 (32,068)
query : 1 - 1,795 (1,795/1,795)
14 exons
identity = 0.998
3'(1.000;0.990;1.000;0.995;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.996)5'
coverage = 1.000
EC number :
EC 3.2.1.52
KEGG pathway :
00511 : Other glycan degradation (9)
00513 : Various types of N-glycan biosynthesis (22)
00520 : Amino sugar and nucleotide sugar metabolism (92)
00531 : Glycosaminoglycan degradation (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
00604 : Glycosphingolipid biosynthesis - ganglio series (8)
01100 : Metabolic pathways (1346)
InterPro :
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015883 : Glycoside hydrolase family 20, catalytic core
IPR017853 : Glycoside hydrolase superfamily
IPR025705 : Beta-hexosaminidase
IPR029018 : Chitobiase/beta-hexosaminidase domain 2-like
IPR029019 : Beta-hexosaminidase, eukaryotic type, N-terminal
GO :
0004553 : Molecular Function : hydrolase activity, hydrolyzing O-glycosyl compounds
0004563 : Molecular Function : beta-N-acetylhexosaminidase activity
0005975 : Biological Process : carbohydrate metabolic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 16, cyto_mito 9.5, extr 8, lyso 4, extr_plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000679343 (
ENST00000566304
)
(Beta-hexosaminidase subunit alpha; EC=3.2.1.52; Beta-N-acetylhexosaminidase subunit alpha; Hexosaminidase subunit A; N-acetyl-beta-glucosaminidase subunit alpha; Precursor;)
genome : 72,636,267 - 72,668,334 (32,068)
query : 1 - 1,795 (1,795/1,795)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.52
KEGG pathway :
00511 : Other glycan degradation (9)
00513 : Various types of N-glycan biosynthesis (22)
00520 : Amino sugar and nucleotide sugar metabolism (92)
00531 : Glycosaminoglycan degradation (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
00604 : Glycosphingolipid biosynthesis - ganglio series (8)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 16, cyto_mito 9.5, extr 8, lyso 4, extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000491152
(
AK296528
)
(Beta-hexosaminidase subunit alpha; EC=3.2.1.52; Beta-N-acetylhexosaminidase subunit alpha; Hexosaminidase subunit A; N-acetyl-beta-glucosaminidase subunit alpha; Precursor;)
genome : 72,637,545 - 72,668,185 (30,641)
query : 1 - 1,382 (1,382/1,382)
11 exons
identity = 0.998
3'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
0.979;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.52
KEGG pathway :
00511 : Other glycan degradation (9)
00513 : Various types of N-glycan biosynthesis (22)
00520 : Amino sugar and nucleotide sugar metabolism (92)
00531 : Glycosaminoglycan degradation (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
00604 : Glycosphingolipid biosynthesis - ganglio series (8)
01100 : Metabolic pathways (1346)
InterPro :
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015883 : Glycoside hydrolase family 20, catalytic core
IPR017853 : Glycoside hydrolase superfamily
IPR025705 : Beta-hexosaminidase
IPR029018 : Chitobiase/beta-hexosaminidase domain 2-like
IPR029019 : Beta-hexosaminidase, eukaryotic type, N-terminal
GO :
0004553 : Molecular Function : hydrolase activity, hydrolyzing O-glycosyl compounds
0004563 : Molecular Function : beta-N-acetylhexosaminidase activity
0005975 : Biological Process : carbohydrate metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 14, nucl 10.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000555793 (
ENST00000457859
)
(Beta-hexosaminidase subunit alpha; EC=3.2.1.52; Beta-N-acetylhexosaminidase subunit alpha; Hexosaminidase subunit A; N-acetyl-beta-glucosaminidase subunit alpha; Precursor;)
genome : 72,637,545 - 72,668,185 (30,641)
query : 1 - 1,383 (1,383/1,383)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.52
KEGG pathway :
00511 : Other glycan degradation (9)
00513 : Various types of N-glycan biosynthesis (22)
00520 : Amino sugar and nucleotide sugar metabolism (92)
00531 : Glycosaminoglycan degradation (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
00604 : Glycosphingolipid biosynthesis - ganglio series (8)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 14, nucl 10.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000680048 (
ENST00000567027
)
(Beta-hexosaminidase subunit alpha; EC=3.2.1.52; Beta-N-acetylhexosaminidase subunit alpha; Hexosaminidase subunit A; N-acetyl-beta-glucosaminidase subunit alpha; Precursor;)
genome : 72,637,575 - 72,668,185 (30,611)
query : 1 - 1,353 (1,353/1,353)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.52
KEGG pathway :
00511 : Other glycan degradation (9)
00513 : Various types of N-glycan biosynthesis (22)
00520 : Amino sugar and nucleotide sugar metabolism (92)
00531 : Glycosaminoglycan degradation (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
00604 : Glycosphingolipid biosynthesis - ganglio series (8)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 14, nucl 10.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000426636
(
AK307770
)
(Beta-hexosaminidase subunit alpha; EC=3.2.1.52; Beta-N-acetylhexosaminidase subunit alpha; Hexosaminidase subunit A; N-acetyl-beta-glucosaminidase subunit alpha; Precursor;)
genome : 72,637,752 - 72,668,334 (30,583)
query : 1 - 1,581 (1,581/1,581)
13 exons
identity = 0.997
3'(0.986;1.000;0.995;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.996)5'
coverage = 1.000
EC number :
EC 3.2.1.52
KEGG pathway :
00511 : Other glycan degradation (9)
00513 : Various types of N-glycan biosynthesis (22)
00520 : Amino sugar and nucleotide sugar metabolism (92)
00531 : Glycosaminoglycan degradation (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
00604 : Glycosphingolipid biosynthesis - ganglio series (8)
01100 : Metabolic pathways (1346)
InterPro :
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015883 : Glycoside hydrolase family 20, catalytic core
IPR017853 : Glycoside hydrolase superfamily
IPR025705 : Beta-hexosaminidase
IPR029018 : Chitobiase/beta-hexosaminidase domain 2-like
IPR029019 : Beta-hexosaminidase, eukaryotic type, N-terminal
GO :
0004553 : Molecular Function : hydrolase activity, hydrolyzing O-glycosyl compounds
0004563 : Molecular Function : beta-N-acetylhexosaminidase activity
0005975 : Biological Process : carbohydrate metabolic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 12, extr 10, cyto_mito 7.5, lyso 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000680178 (
ENST00000567159
)
(Beta-hexosaminidase subunit alpha; EC=3.2.1.52; Beta-N-acetylhexosaminidase subunit alpha; Hexosaminidase subunit A; N-acetyl-beta-glucosaminidase subunit alpha; Precursor;)
genome : 72,637,752 - 72,668,334 (30,583)
query : 1 - 1,582 (1,582/1,582)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.52
KEGG pathway :
00511 : Other glycan degradation (9)
00513 : Various types of N-glycan biosynthesis (22)
00520 : Amino sugar and nucleotide sugar metabolism (92)
00531 : Glycosaminoglycan degradation (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
00604 : Glycosphingolipid biosynthesis - ganglio series (8)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 15, cyto_mito 9, extr 8, lyso 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000492302
(
AK297678
)
(Beta-hexosaminidase subunit alpha; EC=3.2.1.52; Beta-N-acetylhexosaminidase subunit alpha; Hexosaminidase subunit A; N-acetyl-beta-glucosaminidase subunit alpha; Precursor;)
genome : 72,638,318 - 72,668,313 (29,996)
query : 1 - 1,174 (1,174/1,174)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.52
KEGG pathway :
00511 : Other glycan degradation (9)
00513 : Various types of N-glycan biosynthesis (22)
00520 : Amino sugar and nucleotide sugar metabolism (92)
00531 : Glycosaminoglycan degradation (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
00604 : Glycosphingolipid biosynthesis - ganglio series (8)
01100 : Metabolic pathways (1346)
InterPro :
IPR029018 : Chitobiase/beta-hexosaminidase domain 2-like
IPR029019 : Beta-hexosaminidase, eukaryotic type, N-terminal
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000676905 (
ENST00000563762
)
(Beta-hexosaminidase subunit alpha; EC=3.2.1.52; Beta-N-acetylhexosaminidase subunit alpha; Hexosaminidase subunit A; N-acetyl-beta-glucosaminidase subunit alpha; Precursor;)
genome : 72,638,318 - 72,668,313 (29,996)
query : 1 - 1,174 (1,174/1,174)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.52
KEGG pathway :
00511 : Other glycan degradation (9)
00513 : Various types of N-glycan biosynthesis (22)
00520 : Amino sugar and nucleotide sugar metabolism (92)
00531 : Glycosaminoglycan degradation (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
00604 : Glycosphingolipid biosynthesis - ganglio series (8)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000495762
(
AK301138
)
(Beta-hexosaminidase subunit alpha; EC=3.2.1.52; Beta-N-acetylhexosaminidase subunit alpha; Hexosaminidase subunit A; N-acetyl-beta-glucosaminidase subunit alpha; Precursor;)
genome : 72,638,473 - 72,668,344 (29,872)
query : 1 - 1,397 (1,397/1,397)
10 exons
identity = 0.999
3'(1.000;0.995;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.52
KEGG pathway :
00511 : Other glycan degradation (9)
00513 : Various types of N-glycan biosynthesis (22)
00520 : Amino sugar and nucleotide sugar metabolism (92)
00531 : Glycosaminoglycan degradation (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
00604 : Glycosphingolipid biosynthesis - ganglio series (8)
01100 : Metabolic pathways (1346)
InterPro :
IPR029018 : Chitobiase/beta-hexosaminidase domain 2-like
IPR029019 : Beta-hexosaminidase, eukaryotic type, N-terminal
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000527852 (
ENST00000429918
)
(Beta-hexosaminidase subunit alpha; EC=3.2.1.52; Beta-N-acetylhexosaminidase subunit alpha; Hexosaminidase subunit A; N-acetyl-beta-glucosaminidase subunit alpha; Precursor;)
genome : 72,638,473 - 72,668,344 (29,872)
query : 1 - 1,397 (1,397/1,397)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.52
KEGG pathway :
00511 : Other glycan degradation (9)
00513 : Various types of N-glycan biosynthesis (22)
00520 : Amino sugar and nucleotide sugar metabolism (92)
00531 : Glycosaminoglycan degradation (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
00604 : Glycosphingolipid biosynthesis - ganglio series (8)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 19, nucl 16, cyto 10, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000679703 (
ENST00000566672
)
(Beta-hexosaminidase subunit alpha; EC=3.2.1.52; Beta-N-acetylhexosaminidase subunit alpha; Hexosaminidase subunit A; N-acetyl-beta-glucosaminidase subunit alpha; Precursor;)
genome : 72,638,473 - 72,668,344 (29,872)
query : 1 - 1,397 (1,397/1,397)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.52
KEGG pathway :
00511 : Other glycan degradation (9)
00513 : Various types of N-glycan biosynthesis (22)
00520 : Amino sugar and nucleotide sugar metabolism (92)
00531 : Glycosaminoglycan degradation (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
00604 : Glycosphingolipid biosynthesis - ganglio series (8)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 19, nucl 16, cyto 10, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000429020
(
AK310154
)
(Beta-hexosaminidase subunit alpha; EC=3.2.1.52; Beta-N-acetylhexosaminidase subunit alpha; Hexosaminidase subunit A; N-acetyl-beta-glucosaminidase subunit alpha; Precursor;)
genome : 72,638,569 - 72,668,344 (29,776)
query : 1 - 1,412 (1,412/1,412)
11 exons
identity = 0.999
3'(1.000;0.995;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.989;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.52
KEGG pathway :
00511 : Other glycan degradation (9)
00513 : Various types of N-glycan biosynthesis (22)
00520 : Amino sugar and nucleotide sugar metabolism (92)
00531 : Glycosaminoglycan degradation (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
00604 : Glycosphingolipid biosynthesis - ganglio series (8)
01100 : Metabolic pathways (1346)
InterPro :
IPR013781 : Glycoside hydrolase, catalytic domain
IPR015883 : Glycoside hydrolase family 20, catalytic core
IPR017853 : Glycoside hydrolase superfamily
IPR025705 : Beta-hexosaminidase
GO :
0004553 : Molecular Function : hydrolase activity, hydrolyzing O-glycosyl compounds
0004563 : Molecular Function : beta-N-acetylhexosaminidase activity
0005975 : Biological Process : carbohydrate metabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12, nucl 10.5, cyto 10.5, extr 3, mito 3,
cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000682353 (
ENST00000569410
)
(Beta-hexosaminidase subunit alpha; EC=3.2.1.52; Beta-N-acetylhexosaminidase subunit alpha; Hexosaminidase subunit A; N-acetyl-beta-glucosaminidase subunit alpha; Precursor;)
genome : 72,638,576 - 72,668,316 (29,741)
query : 1 - 1,351 (1,351/1,351)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.52
KEGG pathway :
00511 : Other glycan degradation (9)
00513 : Various types of N-glycan biosynthesis (22)
00520 : Amino sugar and nucleotide sugar metabolism (92)
00531 : Glycosaminoglycan degradation (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
00604 : Glycosphingolipid biosynthesis - ganglio series (8)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, lyso 6, cyto_mito 3, cyto 2, mito 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000682449 (
ENST00000569509
)
(Beta-hexosaminidase subunit alpha; EC=3.2.1.52; Beta-N-acetylhexosaminidase subunit alpha; Hexosaminidase subunit A; N-acetyl-beta-glucosaminidase subunit alpha; Precursor;)
genome : 72,642,921 - 72,668,761 (25,841)
query : 1 - 590 (590/590)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.52
KEGG pathway :
00511 : Other glycan degradation (9)
00513 : Various types of N-glycan biosynthesis (22)
00520 : Amino sugar and nucleotide sugar metabolism (92)
00531 : Glycosaminoglycan degradation (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
00604 : Glycosphingolipid biosynthesis - ganglio series (8)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 13.5, extr 8, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000681244 (
ENST00000568260
)
(Beta-hexosaminidase subunit alpha; EC=3.2.1.52; Beta-N-acetylhexosaminidase subunit alpha; Hexosaminidase subunit A; N-acetyl-beta-glucosaminidase subunit alpha; Precursor;)
genome : 72,643,473 - 72,668,294 (24,822)
query : 1 - 674 (674/674)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.52
KEGG pathway :
00511 : Other glycan degradation (9)
00513 : Various types of N-glycan biosynthesis (22)
00520 : Amino sugar and nucleotide sugar metabolism (92)
00531 : Glycosaminoglycan degradation (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
00604 : Glycosphingolipid biosynthesis - ganglio series (8)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 2, mito 2, cyto_mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0012405
HIT000677046 (
ENST00000563908
)
(Beta-hexosaminidase subunit alpha; EC=3.2.1.52; Beta-N-acetylhexosaminidase subunit alpha; Hexosaminidase subunit A; N-acetyl-beta-glucosaminidase subunit alpha; Precursor;)
genome : 72,647,785 - 72,668,310 (20,526)
query : 1 - 524 (524/524)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.2.1.52
KEGG pathway :
00511 : Other glycan degradation (9)
00513 : Various types of N-glycan biosynthesis (22)
00520 : Amino sugar and nucleotide sugar metabolism (92)
00531 : Glycosaminoglycan degradation (15)
00603 : Glycosphingolipid biosynthesis - globo series (12)
00604 : Glycosphingolipid biosynthesis - ganglio series (8)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012405)
HIX0022573
HIT000361166 (
ENST00000379887
)
(E3 ubiquitin-protein ligase ARIH1; EC=6.3.2.-; H7-AP2; HHARI; Monocyte protein 6; MOP-6; Protein ariadne-1 homolog; ARI-1; UbcH7-binding protein; UbcM4-interacting protein; Ubiquitin-conjugating enzyme E2-binding protein 1;)
genome : 72,766,667 - 72,879,692 (113,026)
query : 1 - 6,047 (6,047/6,047)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 14.8333, cyto 13,
cyto_mito 7.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022573)
HIX0022573
HIT000202410 (
NM_005744
)
(E3 ubiquitin-protein ligase ARIH1; EC=6.3.2.-; H7-AP2; HHARI; Monocyte protein 6; MOP-6; Protein ariadne-1 homolog; ARI-1; UbcH7-binding protein; UbcM4-interacting protein; Ubiquitin-conjugating enzyme E2-binding protein 1;)
genome : 72,766,667 - 72,878,896 (112,230)
query : 1 - 5,251 (5,251/5,267)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 6.3.2.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 14.8333, cyto 13,
cyto_mito 7.33333
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022573)
HIX0022573
HIT000245515
(
AJ243190
)
(E3 ubiquitin-protein ligase ARIH1; EC=6.3.2.-; H7-AP2; HHARI; Monocyte protein 6; MOP-6; Protein ariadne-1 homolog; ARI-1; UbcH7-binding protein; UbcM4-interacting protein; Ubiquitin-conjugating enzyme E2-binding protein 1;)
genome : 72,766,667 - 72,875,823 (109,157)
query : 1 - 2,178 (2,178/2,178)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;0.989;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 6.3.2.-
InterPro :
IPR002867 : Zinc finger, C6HC-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 14.8333, cyto 13,
cyto_mito 7.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022573)
HIX0022573
HIT000431581
(
AK312715
)
(E3 ubiquitin-protein ligase ARIH1; EC=6.3.2.-; H7-AP2; HHARI; Monocyte protein 6; MOP-6; Protein ariadne-1 homolog; ARI-1; UbcH7-binding protein; UbcM4-interacting protein; Ubiquitin-conjugating enzyme E2-binding protein 1;)
genome : 72,766,669 - 72,875,633 (108,965)
query : 1 - 1,987 (1,987/1,987)
14 exons
identity = 0.999
5'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 6.3.2.-
InterPro :
IPR002867 : Zinc finger, C6HC-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 14.8333, cyto 13,
cyto_mito 7.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022573)
HIX0022573
HIT000329367
(
AB209432
)
(E3 ubiquitin-protein ligase ARIH1.)
genome : 72,766,711 - 72,876,095 (109,385)
query : 1 - 2,079 (2,079/2,079)
14 exons
identity = 0.996
5'(0.981;0.986;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR002867 : Zinc finger, C6HC-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18.5, cyto_mito 12, nucl 9, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022573)
HIX0022573
HIT000053729
(
BC051877
)
Representative transcript
(E3 ubiquitin-protein ligase ARIH1; EC=6.3.2.-; H7-AP2; HHARI; Monocyte protein 6; MOP-6; Protein ariadne-1 homolog; ARI-1; UbcH7-binding protein; UbcM4-interacting protein; Ubiquitin-conjugating enzyme E2-binding protein 1;)
genome : 72,766,732 - 72,875,817 (109,086)
query : 1 - 2,107 (2,107/2,165)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 6.3.2.-
InterPro :
IPR002867 : Zinc finger, C6HC-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 14.8333, cyto 13,
cyto_mito 7.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022573)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : BC057523
Mus
sp. (Mouse) : BC057680
Danio
sp. (Zebrafish) : BC067684
Rattus
sp. (Rat) : BC083881
Bos
sp. (Cow) : BC133645
Monodelphis
sp. (Opossum) : ENSMODT00000012711
Oryzias
sp. (Medaka) : ENSORLT00000008951
Pongo
sp. (Orangutan) : ENSPPYT00000007810
Tetraodon
sp. (Tetraodon) : GSTENT00016008001
Takifugu
sp. (Fugu) : SINFRUT00000169350
Equus
sp. (Horse) : XM_001494650
Pan
sp. (Chimpanzee) : XM_510520
Canis
sp. (Dog) : XM_535533
HIX0022573
HIT000065910
(
AF072832
)
(E3 ubiquitin-protein ligase ARIH1; EC=6.3.2.-; H7-AP2; HHARI; Monocyte protein 6; MOP-6; Protein ariadne-1 homolog; ARI-1; UbcH7-binding protein; UbcM4-interacting protein; Ubiquitin-conjugating enzyme E2-binding protein 1;)
genome : 72,766,981 - 72,875,633 (108,653)
query : 1 - 1,674 (1,674/1,674)
14 exons
identity = 0.999
5'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
0.977;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 6.3.2.-
InterPro :
IPR002867 : Zinc finger, C6HC-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 14.8333, cyto 13,
cyto_mito 7.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022573)
HIX0022573
HIT000244616
(
AJ130976
)
(E3 ubiquitin-protein ligase ARIH1.)
genome : 72,767,263 - 72,876,625 (109,363)
query : 1 - 2,387 (2,387/2,387)
14 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;0.982;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.995)3'
coverage = 1.000
InterPro :
IPR002867 : Zinc finger, C6HC-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, extr 5, nucl 3, pero 2, mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022573)
HIX0022573
HIT000675199 (
ENST00000561987
)
(E3 ubiquitin-protein ligase ARIH1.)
genome : 72,853,793 - 72,874,459 (20,667)
query : 1 - 403 (403/403)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, mito 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022573)
HIX0012411
HIT000211086 (
NM_033028
)
(Bardet-Biedl syndrome 4 protein;)
genome : 72,978,520 - 73,030,817 (52,298)
query : 1 - 2,498 (2,498/2,515)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.994;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, cyto 15, nucl 14
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012411)
HIX0012411
HIT000723344 (
NM_001252678
)
(Bardet-Biedl syndrome 4 protein isoform 2.)
genome : 72,978,520 - 73,030,817 (52,298)
query : 1 - 2,451 (2,451/2,468)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.994;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 14.5, nucl 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012411)
HIX0012411
HIT000726339 (
NR_045565
)
(Bardet-Biedl syndrome 4 protein isoform 2.)
genome : 72,978,520 - 73,030,817 (52,298)
query : 1 - 2,556 (2,556/2,573)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.994;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, mito 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012411)
HIX0012411
HIT000726340 (
NR_045566
)
(Bardet-Biedl syndrome 4 protein isoform 2.)
genome : 72,978,520 - 73,030,817 (52,298)
query : 1 - 2,811 (2,811/2,828)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.994;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, cyto_nucl 9, cyto 8.5, nucl 6.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012411)
HIX0012411
HIT000498330
(
AK303706
)
(Bardet-Biedl syndrome 4 protein isoform 2.)
genome : 72,978,527 - 73,030,347 (51,821)
query : 3 - 1,976 (1,974/1,976)
15 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.986;1.000;0.994;1.000;1.000;1.000;
1.000)3'
coverage = 0.999
InterPro :
IPR011990 : Tetratricopeptide-like helical domain
IPR013026 : Tetratricopeptide repeat-containing domain
IPR019734 : Tetratricopeptide repeat
IPR028786 : Bardet-Biedl syndrome 4 protein
GO :
0005515 : Molecular Function : protein binding
0034464 : Cellular Component : BBSome
0035058 : Biological Process : nonmotile primary cilium assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 14.5, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012411)
HIX0012411
HIT000679437 (
ENST00000566400
)
(Bardet-Biedl syndrome 4 protein isoform 2.)
genome : 72,978,527 - 73,030,428 (51,902)
query : 1 - 2,055 (2,055/2,055)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 14.5, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012411)
HIX0012411
HIT000641379 (
ENST00000542334
)
(Bardet-Biedl syndrome 4 protein isoform 2.)
genome : 72,978,527 - 73,030,347 (51,821)
query : 1 - 1,974 (1,974/1,974)
15 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 14.5, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012411)
HIX0012411
HIT000110242 (
ENST00000268057
)
(Bardet-Biedl syndrome 4 protein;)
genome : 72,978,528 - 73,030,817 (52,290)
query : 1 - 2,490 (2,490/2,490)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, cyto 15, nucl 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012411)
HIX0012411
HIT000678250 (
ENST00000565160
)
(Bardet-Biedl syndrome 4 protein;)
genome : 72,978,535 - 73,020,335 (41,801)
query : 1 - 681 (681/681)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, extr 9, mito 8, cyto_nucl 8, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012411)
HIX0012411
HIT000675127 (
ENST00000561914
)
(Bardet-Biedl syndrome 4 protein;)
genome : 72,978,545 - 73,023,799 (45,255)
query : 1 - 777 (777/777)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10, cyto 8, cyto_nucl 8, extr 6, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012411)
HIX0012411
HIT000078331
(
AF359281
)
(Bardet-Biedl syndrome 4 protein;)
genome : 72,978,548 - 73,030,816 (52,269)
query : 1 - 2,469 (2,469/2,469)
16 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.994;0.986;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR011990 : Tetratricopeptide-like helical domain
IPR013026 : Tetratricopeptide repeat-containing domain
IPR019734 : Tetratricopeptide repeat
IPR028786 : Bardet-Biedl syndrome 4 protein
GO :
0005515 : Molecular Function : protein binding
0034464 : Cellular Component : BBSome
0035058 : Biological Process : nonmotile primary cilium assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 15, cyto 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012411)
HIX0012411
HIT000493546
(
AK298922
)
(Bardet-Biedl syndrome 4 protein;)
genome : 72,978,548 - 73,030,165 (51,618)
query : 1 - 1,876 (1,876/1,876)
17 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.994;0.986;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 14, cyto 4.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012411)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB170644
Mus
sp. (Mouse) : AK089970
Bos
sp. (Cow) : BC116137
Danio
sp. (Zebrafish) : BC124197
Gallus
sp. (Chicken) : BX934960
Oryzias
sp. (Medaka) : ENSORLT00000002012
Pongo
sp. (Orangutan) : ENSPPYT00000007813
Tetraodon
sp. (Tetraodon) : GSTENT00018149001
Takifugu
sp. (Fugu) : SINFRUT00000129047
Rattus
sp. (Rat) : XM_001074984
Pan
sp. (Chimpanzee) : XM_001175154
Monodelphis
sp. (Opossum) : XM_001378834
Equus
sp. (Horse) : XM_001494565
Canis
sp. (Dog) : XM_544759
HIX0012411
HIT000638648 (
ENST00000539603
)
(Bardet-Biedl syndrome 4 protein isoform 2.)
genome : 72,978,548 - 73,030,165 (51,618)
query : 1 - 1,876 (1,876/1,876)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012411)
HIX0012411
HIT000680294 (
ENST00000567279
)
(Bardet-Biedl syndrome 4 protein isoform 2.)
genome : 72,978,548 - 73,030,165 (51,618)
query : 1 - 1,876 (1,876/1,876)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 27, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012411)
HIX0012411
HIT000433373
(
AK314507
)
(Bardet-Biedl syndrome 4 protein;)
genome : 72,978,548 - 73,029,928 (51,381)
query : 1 - 1,581 (1,581/1,581)
16 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.982;1.000;0.993;0.994;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR011990 : Tetratricopeptide-like helical domain
IPR013026 : Tetratricopeptide repeat-containing domain
IPR019734 : Tetratricopeptide repeat
IPR028786 : Bardet-Biedl syndrome 4 protein
GO :
0005515 : Molecular Function : protein binding
0034464 : Cellular Component : BBSome
0035058 : Biological Process : nonmotile primary cilium assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, cyto 16, nucl 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012411)
HIX0012411
HIT000679963 (
ENST00000566938
)
(Bardet-Biedl syndrome 4 protein;)
genome : 72,978,548 - 73,016,998 (38,451)
query : 1 - 563 (563/563)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 10.5, extr 6, mito 3, pero 3,
extr_plas 3, mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012411)
HIX0012411
HIT000682383 (
ENST00000569440
)
(Bardet-Biedl syndrome 4 protein;)
genome : 72,978,548 - 73,016,916 (38,369)
query : 1 - 579 (579/579)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 12, extr 5, mito 4, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012411)
HIX0012411
HIT000056502
(
BX647855
)
(Bardet-Biedl syndrome 4 protein isoform 2.)
genome : 72,978,550 - 73,030,430 (51,881)
query : 2 - 2,035 (2,034/2,063)
15 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.988;0.986;1.000;0.995;
1.000)3'
coverage = 0.999
InterPro :
IPR011990 : Tetratricopeptide-like helical domain
IPR013026 : Tetratricopeptide repeat-containing domain
IPR019734 : Tetratricopeptide repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 14.5, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012411)
HIX0012411
HIT000040297
(
BC027624
)
(Bardet-Biedl syndrome 4 protein;)
genome : 72,978,551 - 73,030,745 (52,195)
query : 2 - 2,396 (2,395/2,412)
16 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.994;0.986;0.993;
1.000;1.000)3'
coverage = 0.999
InterPro :
IPR011990 : Tetratricopeptide-like helical domain
IPR013026 : Tetratricopeptide repeat-containing domain
IPR019734 : Tetratricopeptide repeat
IPR028786 : Bardet-Biedl syndrome 4 protein
GO :
0005515 : Molecular Function : protein binding
0034464 : Cellular Component : BBSome
0035058 : Biological Process : nonmotile primary cilium assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 15, cyto 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012411)
HIX0012411
HIT000082356
(
AK075321
)
(Bardet-Biedl syndrome 4 protein;)
genome : 72,978,556 - 73,030,432 (51,877)
query : 1 - 2,077 (2,077/2,077)
16 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.994;0.986;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR011990 : Tetratricopeptide-like helical domain
IPR013026 : Tetratricopeptide repeat-containing domain
IPR019734 : Tetratricopeptide repeat
IPR028786 : Bardet-Biedl syndrome 4 protein
GO :
0005515 : Molecular Function : protein binding
0034464 : Cellular Component : BBSome
0035058 : Biological Process : nonmotile primary cilium assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, nucl 15, cyto 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012411)
HIX0012411
HIT000675294 (
ENST00000562084
)
(Conserved hypothetical protein.)
genome : 72,978,561 - 73,029,911 (51,351)
query : 1 - 1,864 (1,864/1,864)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012411)
HIX0012411
HIT000496848
(
AK302224
)
(Conserved hypothetical protein.)
genome : 72,978,566 - 73,029,911 (51,346)
query : 1 - 1,859 (1,859/1,859)
16 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.993;0.994;0.986;0.993;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012411)
HIX0012411
HIT000331834
(
AY457143
)
Representative transcript
(Bardet-Biedl syndrome 4 protein isoform 2.)
genome : 72,978,762 - 73,030,757 (51,996)
query : 2 - 2,510 (2,509/2,510)
16 exons
identity = 0.999
5'(0.993;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.994;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR011990 : Tetratricopeptide-like helical domain
IPR013026 : Tetratricopeptide repeat-containing domain
IPR019734 : Tetratricopeptide repeat
IPR028786 : Bardet-Biedl syndrome 4 protein
GO :
0005515 : Molecular Function : protein binding
0034464 : Cellular Component : BBSome
0035058 : Biological Process : nonmotile primary cilium assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, cyto_nucl 9, cyto 8.5, nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012411)
HIX0012411
HIT000478591 (
ENST00000395205
)
(Bardet-Biedl syndrome 4 protein isoform 2.)
genome : 72,978,858 - 73,030,816 (51,959)
query : 1 - 2,472 (2,472/2,472)
16 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, cyto_nucl 9, cyto 8.5, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012411)
HIX0012411
HIT000682281 (
ENST00000569338
)
(Bardet-Biedl syndrome 4 protein isoform 2.)
genome : 72,987,517 - 73,023,952 (36,436)
query : 15 - 843 (829/843)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 0.983
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, nucl 13.5, cyto 11.5, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012411)
HIX0012411
HIT000087171
(
BC008923
)
(Bardet-Biedl syndrome 4 protein;)
genome : 73,004,603 - 73,030,433 (25,831)
query : 1 - 1,891 (1,891/1,908)
13 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR011990 : Tetratricopeptide-like helical domain
IPR013026 : Tetratricopeptide repeat-containing domain
IPR019734 : Tetratricopeptide repeat
IPR028786 : Bardet-Biedl syndrome 4 protein
GO :
0005515 : Molecular Function : protein binding
0034464 : Cellular Component : BBSome
0035058 : Biological Process : nonmotile primary cilium assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 14.5, nucl 2.5
H-InvDB(Transcript view)
&nb