Clickable map CGI

HIX0012280
HIT000024538 ( AL110274 )
  (Similar to Retinal dehydrogenase 2; RALDH 2; RalDH2; EC=1.2.1.36; Aldehyde dehydrogenase family 1 member A2; Retinaldehyde-specific dehydrogenase type 2; RALDH(II);)
  genome : 58,245,629 - 58,250,021 (4,393)
  query : 1 - 4,392 (4,392/4,415)
  1 exon
  identity = 0.999
  3'(0.999)5'
  coverage = 1.000
  EC number :
    EC 1.2.1.36
  KEGG pathway :
    00830 : Retinol metabolism (13)
    01100 : Metabolic pathways (1346)
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 22, mito 10
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0012280)

HIX0012280
HIT000025706 ( AL137418 )
  (Hypothetical short protein.)
  genome : 58,245,627 - 58,247,156 (1,530)
  query : 1 - 1,528 (1,528/1,539)
  1 exon
  identity = 0.995
  3'(0.995)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 22, mito 10
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0012280)

HIX0012280
HIT000024551 ( AL110299 )
  (Similar to Uncharacterized protein; Fragment;)
  genome : 58,245,627 - 58,256,989 (11,363)
  query : 1 - 3,144 (3,144/3,153)
  5 exons
  identity = 0.997
  3'(0.996;1.000;1.000;1.000;0.997)5'
  coverage = 1.000
  EC number :
    EC 1.2.1.36
  KEGG pathway :
    00830 : Retinol metabolism (13)
    01100 : Metabolic pathways (1346)
  InterPro :
    IPR015590 : Aldehyde dehydrogenase domain
    IPR016161 : Aldehyde/histidinol dehydrogenase
    IPR016163 : Aldehyde dehydrogenase, C-terminal
  GO :
    0008152 : Biological Process : metabolic process
    0016491 : Molecular Function : oxidoreductase activity
    0055114 : Biological Process : oxidation-reduction process
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto_nucl 17.6667, cyto 17.5, cyto_plas 11, nucl 8.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0012280)

HIX0012280
HIT000200678 ( NM_003888 )
  (Retinal dehydrogenase 2 isoform 1.)
  genome : 58,245,622 - 58,358,121 (112,500)
  query : 1 - 3,603 (3,603/3,606)
  13 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000;1.000)5'
  coverage = 0.999
  EC number :
    EC 1.2.1.36
  KEGG pathway :
    00830 : Retinol metabolism (13)
    01100 : Metabolic pathways (1346)
  InterPro :
    IPR015590 : Aldehyde dehydrogenase domain
    IPR016160 : Aldehyde dehydrogenase, conserved site
    IPR016161 : Aldehyde/histidinol dehydrogenase
    IPR016162 : Aldehyde dehydrogenase, N-terminal
    IPR016163 : Aldehyde dehydrogenase, C-terminal
  GO :
    0008152 : Biological Process : metabolic process
    0016491 : Molecular Function : oxidoreductase activity
    0055114 : Biological Process : oxidation-reduction process
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 21.5, cyto_nucl 12, cysk 5, mito 4
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0012280)

HIX0012280
HIT000214528 ( NM_170696 )
  (Retinal dehydrogenase 2 isoform 2.)
  genome : 58,245,622 - 58,358,121 (112,500)
  query : 1 - 3,489 (3,489/3,492)
  12 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000)5'
  coverage = 0.999
  EC number :
    EC 1.2.1.36
  KEGG pathway :
    00830 : Retinol metabolism (13)
    01100 : Metabolic pathways (1346)
  InterPro :
    IPR015590 : Aldehyde dehydrogenase domain
    IPR016160 : Aldehyde dehydrogenase, conserved site
    IPR016161 : Aldehyde/histidinol dehydrogenase
    IPR016162 : Aldehyde dehydrogenase, N-terminal
    IPR016163 : Aldehyde dehydrogenase, C-terminal
  GO :
    0008152 : Biological Process : metabolic process
    0016491 : Molecular Function : oxidoreductase activity
    0055114 : Biological Process : oxidation-reduction process
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 22, cyto_nucl 14.5, mito 7
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0012280)

HIX0012280
HIT000657343 ( NM_001206897 )
  (Retinal dehydrogenase 2 isoform 4.)
  genome : 58,245,622 - 58,358,121 (112,500)
  query : 1 - 3,700 (3,700/3,703)
  14 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
  coverage = 0.999
  EC number :
    EC 1.2.1.36
  KEGG pathway :
    00830 : Retinol metabolism (13)
    01100 : Metabolic pathways (1346)
  InterPro :
    IPR015590 : Aldehyde dehydrogenase domain
    IPR016160 : Aldehyde dehydrogenase, conserved site
    IPR016161 : Aldehyde/histidinol dehydrogenase
    IPR016162 : Aldehyde dehydrogenase, N-terminal
    IPR016163 : Aldehyde dehydrogenase, C-terminal
  GO :
    0008152 : Biological Process : metabolic process
    0016491 : Molecular Function : oxidoreductase activity
    0055114 : Biological Process : oxidation-reduction process
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 24.5, cyto_nucl 13.5, mito 3
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0012280)

HIX0012280
HIT000214529 ( NM_170697 )
  (Retinal dehydrogenase 2 isoform 3.)
  genome : 58,245,622 - 58,306,295 (60,674)
  query : 1 - 3,207 (3,207/3,210)
  11 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000)5'
  coverage = 0.999
  EC number :
    EC 1.2.1.36
  KEGG pathway :
    00830 : Retinol metabolism (13)
    01100 : Metabolic pathways (1346)
  InterPro :
    IPR015590 : Aldehyde dehydrogenase domain
    IPR016160 : Aldehyde dehydrogenase, conserved site
    IPR016161 : Aldehyde/histidinol dehydrogenase
    IPR016162 : Aldehyde dehydrogenase, N-terminal
    IPR016163 : Aldehyde dehydrogenase, C-terminal
  GO :
    0008152 : Biological Process : metabolic process
    0016491 : Molecular Function : oxidoreductase activity
    0055114 : Biological Process : oxidation-reduction process
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 21.5, cyto_nucl 13.8333, cyto_pero 12.1667,
    nucl 4, extr 3
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0012280)

HIX0012280
HIT000528053 ( ENST00000430119 )
  (Retinal dehydrogenase 2 isoform 3.)
  genome : 58,245,627 - 58,306,222 (60,596)
  query : 1 - 3,129 (3,129/3,129)
  11 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  EC number :
    EC 1.2.1.36
  KEGG pathway :
    00830 : Retinol metabolism (13)
    01100 : Metabolic pathways (1346)
  InterPro :
    IPR015590 : Aldehyde dehydrogenase domain
    IPR016160 : Aldehyde dehydrogenase, conserved site
    IPR016161 : Aldehyde/histidinol dehydrogenase
    IPR016162 : Aldehyde dehydrogenase, N-terminal
    IPR016163 : Aldehyde dehydrogenase, C-terminal
  GO :
    0008152 : Biological Process : metabolic process
    0016491 : Molecular Function : oxidoreductase activity
    0055114 : Biological Process : oxidation-reduction process
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 21.5, cyto_nucl 13.8333, cyto_pero 12.1667,
    nucl 4, extr 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0012280)

HIX0012280
HIT000276591 ( CR597396 )
  (Non-protein coding transcript.)
  genome : 58,245,627 - 58,245,865 (239)
  query : 1 - 239 (239/239)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0012280)

HIX0012280
HIT000048582 ( AK128709 )
  (Retinal dehydrogenase 2; RALDH 2; RalDH2; EC=1.2.1.36; Aldehyde dehydrogenase family 1 member A2; Retinaldehyde-specific dehydrogenase type 2; RALDH(II);)
  genome : 58,245,628 - 58,358,616 (112,989)
  query : 1 - 4,092 (4,092/4,092)
  13 exons
  identity = 0.997
  3'(0.996;1.000;1.000;1.000;0.995;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000;0.998)5'
  coverage = 1.000
  InterPro :
    IPR015590 : Aldehyde dehydrogenase domain
    IPR016160 : Aldehyde dehydrogenase, conserved site
    IPR016161 : Aldehyde/histidinol dehydrogenase
    IPR016162 : Aldehyde dehydrogenase, N-terminal
    IPR016163 : Aldehyde dehydrogenase, C-terminal
  GO :
    0008152 : Biological Process : metabolic process
    0016491 : Molecular Function : oxidoreductase activity
    0055114 : Biological Process : oxidation-reduction process
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 21.5, cyto_nucl 12, cysk 6, mito 3, cysk_plas 3
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0012280)

HIX0012280
HIT000105986 ( ENST00000249750 )
  (Retinal dehydrogenase 2 isoform 1.)
  genome : 58,245,628 - 58,358,616 (112,989)
  query : 1 - 4,092 (4,092/4,092)
  13 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 21.5, cyto_nucl 12, cysk 5, mito 4
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0012280)

HIX0012280
HIT000307479 ( ENST00000347587 )
  (Retinal dehydrogenase 2 isoform 2.)
  genome : 58,245,628 - 58,358,616 (112,989)
  query : 1 - 3,978 (3,978/3,978)
  12 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  EC number :
    EC 1.2.1.36
  KEGG pathway :
    00830 : Retinol metabolism (13)
    01100 : Metabolic pathways (1346)
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 22.5, cyto_nucl 17, cyto 8.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0012280)

HIX0012280
HIT000642431 ( ENST00000543386 )
  (Retinal dehydrogenase 2 isoform 3.)
  genome : 58,245,628 - 58,306,479 (60,852)
  query : 31 - 3,237 (3,207/3,237)
  12 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000)5'
  coverage = 0.991
  InterPro :
    IPR015590 : Aldehyde dehydrogenase domain
    IPR016160 : Aldehyde dehydrogenase, conserved site
    IPR016161 : Aldehyde/histidinol dehydrogenase
    IPR016162 : Aldehyde dehydrogenase, N-terminal
    IPR016163 : Aldehyde dehydrogenase, C-terminal
  GO :
    0008152 : Biological Process : metabolic process
    0016491 : Molecular Function : oxidoreductase activity
    0055114 : Biological Process : oxidation-reduction process
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 22, cyto_nucl 16.3333, cyto_plas 12.1667,
    nucl 5.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0012280)

HIX0012280
HIT000058398 ( AB015228 )
  (Similar to Retinal dehydrogenase 2; RALDH 2; RalDH2; EC=1.2.1.36; Aldehyde dehydrogenase family 1 member A2; Retinaldehyde-specific dehydrogenase type 2; RALDH(II);)
  genome : 58,245,629 - 58,306,186 (60,558)
  query : 1 - 3,091 (3,091/3,092)
  11 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;0.995;1.000;1.000;
      1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  InterPro :
    IPR015590 : Aldehyde dehydrogenase domain
    IPR016160 : Aldehyde dehydrogenase, conserved site
    IPR016161 : Aldehyde/histidinol dehydrogenase
    IPR016162 : Aldehyde dehydrogenase, N-terminal
    IPR016163 : Aldehyde dehydrogenase, C-terminal
  GO :
    0008152 : Biological Process : metabolic process
    0016491 : Molecular Function : oxidoreductase activity
    0055114 : Biological Process : oxidation-reduction process
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 25, cyto 5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0012280)

HIX0038154
HIT000280735 ( CR601540 )
  Representative transcript
  (Hypothetical protein.)
  genome : 58,245,658 - 58,247,072 (1,415)
  query : 1 - 1,415 (1,415/1,415)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto_nucl 13, cyto 11.5, extr 10, nucl 9.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0038154)

HIX0012280
HIT000497681 ( AK303057 )
  (Retinal dehydrogenase 2; RALDH 2; RalDH2; EC=1.2.1.36; Aldehyde dehydrogenase family 1 member A2; Retinaldehyde-specific dehydrogenase type 2; RALDH(II);)
  genome : 58,246,018 - 58,357,866 (111,849)
  query : 1 - 3,049 (3,049/3,049)
  14 exons
  identity = 0.999
  3'(0.999;1.000;1.000;1.000;1.000;1.000;0.991;
      1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  EC number :
    EC 1.2.1.36
  KEGG pathway :
    00830 : Retinol metabolism (13)
    01100 : Metabolic pathways (1346)
  InterPro :
    IPR015590 : Aldehyde dehydrogenase domain
    IPR016160 : Aldehyde dehydrogenase, conserved site
    IPR016161 : Aldehyde/histidinol dehydrogenase
    IPR016162 : Aldehyde dehydrogenase, N-terminal
    IPR016163 : Aldehyde dehydrogenase, C-terminal
  GO :
    0008152 : Biological Process : metabolic process
    0016491 : Molecular Function : oxidoreductase activity
    0055114 : Biological Process : oxidation-reduction process
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 17, mito 8, cyto 7
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0012280)

HIX0012280
HIT000636417 ( ENST00000537372 )
  (Retinal dehydrogenase 2 isoform 4.)
  genome : 58,246,018 - 58,357,866 (111,849)
  query : 1 - 3,049 (3,049/3,049)
  14 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  InterPro :
    IPR015590 : Aldehyde dehydrogenase domain
    IPR016160 : Aldehyde dehydrogenase, conserved site
    IPR016161 : Aldehyde/histidinol dehydrogenase
    IPR016162 : Aldehyde dehydrogenase, N-terminal
    IPR016163 : Aldehyde dehydrogenase, C-terminal
  GO :
    0008152 : Biological Process : metabolic process
    0016491 : Molecular Function : oxidoreductase activity
    0055114 : Biological Process : oxidation-reduction process
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 24.5, cyto_nucl 13.5, mito 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0012280)

HIX0012280
HIT000489605 ( AK294981 )
  (Retinal dehydrogenase 2 isoform 3.)
  genome : 58,247,261 - 58,571,462 (324,202)
  query : 1 - 1,664 (1,664/1,664)
  13 exons
  identity = 0.998
  3'(1.000;1.000;1.000;1.000;0.995;1.000;1.000;
      1.000;1.000;0.992;0.993;0.990;1.000)5'
  coverage = 1.000
  EC number :
    EC 1.2.1.36
  KEGG pathway :
    00830 : Retinol metabolism (13)
    01100 : Metabolic pathways (1346)
  InterPro :
    IPR015590 : Aldehyde dehydrogenase domain
    IPR016160 : Aldehyde dehydrogenase, conserved site
    IPR016161 : Aldehyde/histidinol dehydrogenase
    IPR016162 : Aldehyde dehydrogenase, N-terminal
    IPR016163 : Aldehyde dehydrogenase, C-terminal
  GO :
    0008152 : Biological Process : metabolic process
    0016491 : Molecular Function : oxidoreductase activity
    0055114 : Biological Process : oxidation-reduction process
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 20, cyto_nucl 16.5, nucl 9
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0012280)

HIX0012280
HIT000058396 ( AB015226 )
  (Retinal dehydrogenase 2; RALDH 2; RalDH2; EC=1.2.1.36; Aldehyde dehydrogenase family 1 member A2; Retinaldehyde-specific dehydrogenase type 2; RALDH(II);)
  genome : 58,247,365 - 58,357,891 (110,527)
  query : 1 - 1,630 (1,630/1,630)
  13 exons
  identity = 0.999
  3'(1.000;1.000;1.000;1.000;0.995;1.000;1.000;
      1.000;1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  InterPro :
    IPR015590 : Aldehyde dehydrogenase domain
    IPR016160 : Aldehyde dehydrogenase, conserved site
    IPR016161 : Aldehyde/histidinol dehydrogenase
    IPR016162 : Aldehyde dehydrogenase, N-terminal
    IPR016163 : Aldehyde dehydrogenase, C-terminal
  GO :
    0008152 : Biological Process : metabolic process
    0016491 : Molecular Function : oxidoreductase activity
    0055114 : Biological Process : oxidation-reduction process
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 21.5, cyto_nucl 12, cysk 6, mito 3, cysk_plas 3
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0012280)

HIX0012280
HIT000058397 ( AB015227 )
  (Retinal dehydrogenase 2 isoform 3.)
  genome : 58,247,365 - 58,306,224 (58,860)
  query : 1 - 1,393 (1,393/1,393)
  11 exons
  identity = 0.999
  3'(1.000;1.000;1.000;1.000;0.995;1.000;1.000;
      1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  EC number :
    EC 1.2.1.36
  KEGG pathway :
    00830 : Retinol metabolism (13)
    01100 : Metabolic pathways (1346)
  InterPro :
    IPR015590 : Aldehyde dehydrogenase domain
    IPR016160 : Aldehyde dehydrogenase, conserved site
    IPR016161 : Aldehyde/histidinol dehydrogenase
    IPR016162 : Aldehyde dehydrogenase, N-terminal
    IPR016163 : Aldehyde dehydrogenase, C-terminal
  GO :
    0008152 : Biological Process : metabolic process
    0016491 : Molecular Function : oxidoreductase activity
    0055114 : Biological Process : oxidation-reduction process
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 22.5, cyto_nucl 13.8333, cyto_pero 12.6667,
    extr 3, nucl 3
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0012280)

HIX0012280
HIT000440610 ( DQ574079 )
  (Non-protein coding transcript.)
  genome : 58,254,219 - 58,254,248 (30)
  query : 1 - 30 (30/30)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0012280)

HIX0038341
HIT000093619 ( BC034958 )
  Representative transcript
  (Similar to Retinal dehydrogenase 2; RALDH 2; RalDH2; EC=1.2.1.36; Aldehyde dehydrogenase family 1 member A2; Retinaldehyde-specific dehydrogenase type 2; RALDH(II);)
  genome : 58,357,423 - 58,364,903 (7,481)
  query : 2 - 1,758 (1,757/1,772)
  4 exons
  identity = 0.995
  5'(0.992;0.967;0.996;1.000)3'
  coverage = 0.999
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 19, cyto 7, nucl 3
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0038341)

HIX0012281
HIT000494679 ( AK300055 )
  (Similar to Aquaporin-9; AQP-9; Aquaglyceroporin-9; Small solute channel 1;)
  genome : 58,430,395 - 58,476,778 (46,384)
  query : 1 - 1,307 (1,307/1,307)
  6 exons
  identity = 0.998
  5'(1.000;1.000;1.000;1.000;0.995;0.998)3'
  coverage = 1.000
  InterPro :
    IPR000425 : Major intrinsic protein
    IPR012269 : Aquaporin
    IPR015685 : Aquaporin 9
    IPR022357 : Major intrinsic protein, conserved site
    IPR023271 : Aquaporin-like
  GO :
    0005215 : Molecular Function : transporter activity
    0006810 : Biological Process : transport
    0016020 : Cellular Component : membrane
    0016021 : Cellular Component : integral to membrane
    0055085 : Biological Process : transmembrane transport
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 29
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0012281)

HIX0012281
HIT000208139 ( NM_020980 )
  (Aquaporin-9.)
  genome : 58,430,408 - 58,478,110 (47,703)
  query : 1 - 3,021 (3,021/3,033)
  6 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;0.999)3'
  coverage = 1.000
  InterPro :
    IPR000425 : Major intrinsic protein
    IPR012269 : Aquaporin
    IPR015685 : Aquaporin 9
    IPR022357 : Major intrinsic protein, conserved site
    IPR023271 : Aquaporin-like
  GO :
    0005215 : Molecular Function : transporter activity
    0006810 : Biological Process : transport
    0016020 : Cellular Component : membrane
    0016021 : Cellular Component : integral to membrane
    0055085 : Biological Process : transmembrane transport
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 32
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0012281)

HIX0012281
HIT000103444 ( ENST00000219919 )
  (Aquaporin-9.)
  genome : 58,430,408 - 58,478,110 (47,703)
  query : 1 - 3,021 (3,021/3,021)
  6 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto_mito 12.1667, cyto 12, mito 12, cyto_nucl 9
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0012281)

HIX0012281
HIT000432080 ( AK313214 )
  (Aquaporin-9; AQP-9; Aquaglyceroporin-9; Small solute channel 1;)
  genome : 58,430,471 - 58,476,334 (45,864)
  query : 1 - 1,183 (1,183/1,183)
  6 exons
  identity = 0.997
  5'(0.998;1.000;1.000;0.992;0.995;0.994)3'
  coverage = 1.000
  InterPro :
    IPR000425 : Major intrinsic protein
    IPR012269 : Aquaporin
    IPR015685 : Aquaporin 9
    IPR022357 : Major intrinsic protein, conserved site
    IPR023271 : Aquaporin-like
  GO :
    0005215 : Molecular Function : transporter activity
    0006810 : Biological Process : transport
    0016020 : Cellular Component : membrane
    0016021 : Cellular Component : integral to membrane
    0055085 : Biological Process : transmembrane transport
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 32
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0012281)

HIX0012281
HIT000062396 ( AF016495 )
  (Aquaporin-9; AQP-9; Aquaglyceroporin-9; Small solute channel 1;)
  genome : 58,430,537 - 58,478,109 (47,573)
  query : 1 - 2,890 (2,890/2,890)
  6 exons
  identity = 0.999
  5'(1.000;1.000;1.000;1.000;0.995;0.998)3'
  coverage = 1.000
  InterPro :
    IPR000425 : Major intrinsic protein
    IPR012269 : Aquaporin
    IPR015685 : Aquaporin 9
    IPR022357 : Major intrinsic protein, conserved site
    IPR023271 : Aquaporin-like
  GO :
    0005215 : Molecular Function : transporter activity
    0006810 : Biological Process : transport
    0016020 : Cellular Component : membrane
    0016021 : Cellular Component : integral to membrane
    0055085 : Biological Process : transmembrane transport
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 32
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0012281)

HIX0012281
HIT000058161 ( AB008775 )
  (Aquaporin-9; AQP-9; Aquaglyceroporin-9; Small solute channel 1;)
  genome : 58,430,556 - 58,478,107 (47,552)
  query : 8 - 2,877 (2,870/2,878)
  6 exons
  identity = 0.999
  5'(1.000;1.000;1.000;1.000;0.995;0.999)3'
  coverage = 0.997
  InterPro :
    IPR000425 : Major intrinsic protein
    IPR012269 : Aquaporin
    IPR015685 : Aquaporin 9
    IPR022357 : Major intrinsic protein, conserved site
    IPR023271 : Aquaporin-like
  GO :
    0005215 : Molecular Function : transporter activity
    0006810 : Biological Process : transport
    0016020 : Cellular Component : membrane
    0016021 : Cellular Component : integral to membrane
    0055085 : Biological Process : transmembrane transport
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 32
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0012281)

HIX0012281
HIT000635538 ( ENST00000536493 )
  (Aquaporin-9.)
  genome : 58,430,580 - 58,478,110 (47,531)
  query : 1 - 2,803 (2,803/2,803)
  7 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  InterPro :
    IPR000425 : Major intrinsic protein
    IPR012269 : Aquaporin
    IPR015685 : Aquaporin 9
    IPR022357 : Major intrinsic protein, conserved site
    IPR023271 : Aquaporin-like
  GO :
    0005215 : Molecular Function : transporter activity
    0006810 : Biological Process : transport
    0016020 : Cellular Component : membrane
    0016021 : Cellular Component : integral to membrane
    0055085 : Biological Process : transmembrane transport
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 32
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0012281)

HIX0012281
HIT000268896 ( CR542027 )
  (Aquaporin-9; AQP-9; Aquaglyceroporin-9; Small solute channel 1;)
  genome : 58,430,765 - 58,476,331 (45,567)
  query : 1 - 885 (885/885)
  6 exons
  identity = 0.998
  5'(1.000;1.000;1.000;1.000;0.995;0.994)3'
  coverage = 1.000
  InterPro :
    IPR000425 : Major intrinsic protein
    IPR012269 : Aquaporin
    IPR015685 : Aquaporin 9
    IPR022357 : Major intrinsic protein, conserved site
    IPR023271 : Aquaporin-like
  GO :
    0005215 : Molecular Function : transporter activity
    0006810 : Biological Process : transport
    0016020 : Cellular Component : membrane
    0016021 : Cellular Component : integral to membrane
    0055085 : Biological Process : transmembrane transport
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 32
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0012281)

HIX0211894
HIT000574604 ( ENST00000470114 )
  Representative transcript
  (Non-protein coding transcript.)
  genome : 58,442,766 - 58,442,833 (68)
  query : 1 - 68 (68/68)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0211894)

HIX0211925
HIT000601644 ( ENST00000498421 )
  Representative transcript
  (Non-protein coding transcript.)
  genome : 58,443,165 - 58,443,231 (67)
  query : 1 - 67 (67/67)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0211925)

HIX0211916
HIT000593750 ( ENST00000490181 )
  Representative transcript
  (Non-protein coding transcript.)
  genome : 58,444,709 - 58,444,776 (68)
  query : 1 - 68 (68/68)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0211916)

HIX0211899
HIT000579025 ( ENST00000474747 )
  Representative transcript
  (Non-protein coding transcript.)
  genome : 58,447,086 - 58,447,154 (69)
  query : 1 - 69 (69/69)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0211899)

HIX0211897
HIT000576829 ( ENST00000472455 )
  Representative transcript
  (Non-protein coding transcript.)
  genome : 58,448,335 - 58,448,401 (67)
  query : 1 - 67 (67/67)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0211897)

HIX0211912
HIT000590531 ( ENST00000486795 )
  Representative transcript
  (Ribosomal protein L28e family protein.)
  genome : 58,492,805 - 58,493,214 (410)
  query : 1 - 410 (410/410)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  InterPro :
    IPR002672 : Ribosomal protein L28e
  GO :
    0003735 : Molecular Function : structural constituent of ribosome
    0005622 : Cellular Component : intracellular
    0005840 : Cellular Component : ribosome
    0006412 : Biological Process : translation
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 11, extr 9, nucl 7.5, cyto_nucl 6, mito_pero 6
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0211912)

HIX0018772
HIT000020281 ( AK095426 )
  Representative transcript
  (Hypothetical protein.)
  genome : 58,503,889 - 58,506,117 (2,229)
  query : 1 - 2,229 (2,229/2,229)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    cyto 28.5, cyto_nucl 15
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0018772)

AC012653.8
58208542-58309133 F +
NCBI

AC025431.7
58309134-58442811 F +
NCBI

AC066616.7
58442812-58608541 F +
NCBI

bases per tick : kb first site :
main : All Human Genes JIGSAW prediction ESTs assembly
homology : UCSC CCDS Pseudogene.org Conserved regions ( Segmental duplication P.troglodytes P.abelii M.mulatta M.musculus R.norvegicus C.familiaris E.caballus B.taurus M.domestica G.gallus D.rerio O.latipes T.nigroviridis T.rubripes )
gene prediction : FGENESH GenScan HMMgene tRNA
show... : SNPs ESTs(summary) ESTs(detail) CAGE tag(summary) CAGE tag(detail)
sequence viewer : = ( , )