bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0222628
HIT000673914 (
ENST00000560675
)
(Hypothetical short protein.)
genome : 39,048,755 - 39,051,614 (2,860)
query : 1 - 821 (821/821)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto 9.5, E.R._mito 9.5, mito_pero 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222628)
HIX0038501
HIT000191355
(
K00627
)
Representative transcript
(LINE-1 reverse transcriptase homolog; EC=2.7.7.49;)
genome : 39,143,507 - 39,145,633 (2,127)
query : 2 - 2,125 (2,124/2,126)
1 exon
identity = 0.993
5'(0.993)3'
coverage = 0.999
EC number :
EC 2.7.7.49
InterPro :
IPR000477 : Reverse transcriptase domain
GO :
0003723 : Molecular Function : RNA binding
0003964 : Molecular Function : RNA-directed DNA polymerase activity
0006278 : Biological Process : RNA-dependent DNA replication
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto 12.5, cyto_nucl 7.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038501)
HIX0222130
HIT000673444 (
ENST00000560197
)
(Hypothetical short protein.)
genome : 39,157,523 - 39,410,914 (253,392)
query : 1 - 1,378 (1,378/1,378)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, extr 6, nucl 4, mito 3, extr_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222130)
HIX0020308
HIT000015413
(
AK090546
)
Representative transcript
(Conserved hypothetical protein.)
genome : 39,163,988 - 39,166,036 (2,049)
query : 1 - 2,050 (2,050/2,050)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 10.5, extr 10, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020308)
HIX0222130
HIT000674288 (
ENST00000561058
)
(Hypothetical short protein.)
genome : 39,177,671 - 39,566,084 (388,414)
query : 1 - 570 (570/570)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, extr 7, cyto_nucl 3.66667, nucl 3.5,
cyto_pero 2.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222130)
HIX0222130
HIT000673726 (
ENST00000560484
)
(Conserved hypothetical protein.)
genome : 39,178,835 - 39,713,176 (534,342)
query : 1 - 550 (550/550)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 10, cyto_nucl 8.5, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222130)
HIX0222633
HIT000673947 (
ENST00000560709
)
(Hypothetical short protein.)
genome : 39,311,434 - 39,317,119 (5,686)
query : 1 - 574 (574/574)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 11.5, extr 10, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222633)
HIX0222130
HIT000671495 (
ENST00000558209
)
(Non-protein coding transcript.)
genome : 39,363,772 - 39,719,396 (355,625)
query : 1 - 489 (489/489)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222130)
HIX0222133
HIT000671540 (
ENST00000558255
)
(Hypothetical protein.)
genome : 39,459,940 - 39,472,127 (12,188)
query : 1 - 696 (696/696)
5 exons
identity = 0.990
5'(1.000;0.988;0.972;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 12.5, cyto_nucl 11.5, extr 10, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222133)
HIX0222133
HIT000673505 (
ENST00000560259
)
(Hypothetical short protein.)
genome : 39,460,009 - 39,462,008 (2,000)
query : 1 - 433 (433/433)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, extr 12, cyto_nucl 11.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222133)
HIX0222133
HIT000673378 (
ENST00000560129
)
(Hypothetical short protein.)
genome : 39,468,966 - 39,472,231 (3,266)
query : 1 - 383 (383/383)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, mito 3, nucl 2, cyto 2, cyto_nucl 2, lyso 2,
mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222133)
HIX0038375
HIT000096748
(
BC041482
)
Representative transcript
(Conserved hypothetical protein.)
genome : 39,480,639 - 39,486,510 (5,872)
query : 1 - 1,961 (1,961/1,976)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 8, mito 4, cyto_nucl 4, cyto_pero 4,
cyto_plas 4, cyto_golg 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038375)
HIX0038375
HIT000673981 (
ENST00000560743
)
(Conserved hypothetical protein.)
genome : 39,480,639 - 39,486,510 (5,872)
query : 1 - 1,961 (1,961/1,961)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 8, mito 4, cyto_nucl 4, cyto_pero 4,
cyto_plas 4, cyto_golg 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038375)
HIX0012115
HIT000056355
(
BX647708
)
Representative transcript
(Conserved hypothetical protein.)
genome : 39,542,885 - 39,547,042 (4,158)
query : 2 - 3,076 (3,075/3,093)
2 exons
identity = 0.998
5'(1.000;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, cyto_nucl 7, mito 6.5, E.R._mito 6.5,
pero 4, E.R. 3.5, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012115)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : ENSMMUT00000008432
Pan
sp. (Chimpanzee) : XR_020090
HIX0012115
HIT000320438 (
NM_207445
)
(Conserved hypothetical protein.)
genome : 39,542,885 - 39,547,048 (4,164)
query : 1 - 3,080 (3,080/3,080)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, cyto_nucl 7, mito 6.5, E.R._mito 6.5,
pero 4, E.R. 3.5, plas 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012115)
HIX0012115
HIT000121742 (
ENST00000318578
)
(Conserved hypothetical protein.)
genome : 39,542,885 - 39,547,046 (4,162)
query : 1 - 3,078 (3,078/3,078)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, cyto_nucl 7, mito 6.5, E.R._mito 6.5,
pero 4, E.R. 3.5, plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012115)
HIX0012115
HIT000021705
(
AK096850
)
(Conserved hypothetical protein.)
genome : 39,542,919 - 39,547,037 (4,119)
query : 1 - 3,034 (3,034/3,041)
2 exons
identity = 0.998
5'(1.000;0.998)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, cyto_nucl 7, mito 6.5, E.R._mito 6.5,
pero 4, E.R. 3.5, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012115)
HIX0012115
HIT000503520
(
BC171789
)
(Conserved hypothetical protein.)
genome : 39,542,967 - 39,545,114 (2,148)
query : 2 - 954 (953/954)
2 exons
identity = 0.998
5'(1.000;0.998)3'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10.5, cyto_nucl 7, mito 6.5, E.R._mito 6.5,
pero 4, E.R. 3.5, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012115)
HIX0012115
HIT000501240
(
BC137300
)
(Conserved hypothetical protein.)
genome : 39,542,967 - 39,545,114 (2,148)
query : 1 - 1,064 (1,064/1,064)
2 exons
identity = 0.999
5'(1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, cyto_nucl 7, mito 6.5, E.R._mito 6.5,
pero 4, E.R. 3.5, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012115)
HIX0012115
HIT000501241
(
BC137301
)
(Conserved hypothetical protein.)
genome : 39,542,967 - 39,545,114 (2,148)
query : 1 - 1,064 (1,064/1,064)
2 exons
identity = 0.999
5'(1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, cyto_nucl 7, mito 6.5, E.R._mito 6.5,
pero 4, E.R. 3.5, plas 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012115)
HIX0012115
HIT000674449 (
ENST00000561223
)
(Conserved hypothetical protein.)
genome : 39,542,967 - 39,545,114 (2,148)
query : 1 - 953 (953/953)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, cyto_nucl 7, mito 6.5, E.R._mito 6.5,
pero 4, E.R. 3.5, plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012115)
HIX0026843
HIT000045414
(
AK125541
)
Representative transcript
(LINE-1 reverse transcriptase homolog; EC=2.7.7.49;)
genome : 39,573,665 - 39,576,274 (2,610)
query : 1 - 2,610 (2,610/2,610)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 2.7.7.49
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 17, cyto 9.5, cyto_nucl 8.5, E.R._mito 8.5,
mito_pero 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026843)
HIX0222130
HIT000672585 (
ENST00000559318
)
(Conserved hypothetical protein.)
genome : 39,591,540 - 39,713,152 (121,613)
query : 1 - 552 (552/552)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, extr 9, cyto_mito 9, mito_nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222130)
HIX0222131
HIT000671530 (
ENST00000558245
)
(Hypothetical short protein.)
genome : 39,592,619 - 39,602,983 (10,365)
query : 1 - 345 (345/345)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 9.5, cyto_nucl 6.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222131)
HIX0222131
HIT000672221 (
ENST00000558948
)
(Conserved hypothetical protein.)
genome : 39,599,397 - 39,602,960 (3,564)
query : 1 - 910 (910/910)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, nucl 3, cyto 3, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222131)
HIX0222155
HIT000672120 (
ENST00000558846
)
(Hypothetical short protein.)
genome : 39,764,904 - 39,765,805 (902)
query : 1 - 730 (730/730)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 3, nucl 2, mito 2, cyto_golg 2,
mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222155)
HIX0222155
HIT000673793 (
ENST00000560552
)
(Hypothetical short protein.)
genome : 39,765,474 - 39,771,579 (6,106)
query : 1 - 579 (579/579)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222155)
HIX0222644
HIT000674052 (
ENST00000560815
)
(Hypothetical short protein.)
genome : 39,773,169 - 39,773,407 (239)
query : 18 - 256 (239/256)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.934
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 13, extr 10, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222644)
HIX0222153
HIT000672092 (
ENST00000558818
)
(Hypothetical short protein.)
genome : 39,804,607 - 39,806,326 (1,720)
query : 1 - 350 (350/350)
3 exons
identity = 0.989
3'(1.000;1.000;0.927)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, cyto 13.5, nucl 11.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222153)
HIX0222153
HIT000672832 (
ENST00000559570
)
(Hypothetical short protein.)
genome : 39,804,683 - 39,812,055 (7,373)
query : 1 - 462 (462/462)
4 exons
identity = 0.994
3'(1.000;1.000;0.973;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, cyto 13.5, nucl 11.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222153)
HIX0038125
HIT000499378
(
AK304754
)
(Thrombospondin-1; Precursor;)
genome : 39,873,279 - 39,887,753 (14,475)
query : 1 - 3,621 (3,621/3,621)
22 exons
identity = 0.998
5'(1.000;0.986;0.985;1.000;1.000;1.000;1.000;
0.994;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;0.992;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR000742 : Epidermal growth factor-like domain
IPR000884 : Thrombospondin, type 1 repeat
IPR001007 : von Willebrand factor, type C
IPR001791 : Laminin G domain
IPR001881 : EGF-like calcium-binding domain
IPR003367 : Thrombospondin, type 3-like repeat
IPR008859 : Thrombospondin, C-terminal
IPR013032 : EGF-like, conserved site
IPR013320 : Concanavalin A-like lectin/glucanase domain
IPR017897 : Thrombospondin, type 3 repeat
IPR028499 : Thrombospondin-1
IPR028974 : TSP type-3 repeat
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0005576 : Cellular Component : extracellular region
0005615 : Cellular Component : extracellular space
0006954 : Biological Process : inflammatory response
0007155 : Biological Process : cell adhesion
0008201 : Molecular Function : heparin binding
0016525 : Biological Process : negative regulation of angiogenesis
0050840 : Molecular Function : extracellular matrix binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 17, extr 9, lyso 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038125)
HIX0038125
HIT000200091 (
NM_003246
)
(Thrombospondin-1 family protein.)
genome : 39,873,280 - 39,889,668 (16,389)
query : 1 - 5,790 (5,790/5,820)
22 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12, mito 8, nucl 5, cyto_pero 4, cyto 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038125)
HIX0038125
HIT000424436
(
AK291639
)
(Thrombospondin-1; Precursor;)
genome : 39,873,280 - 39,887,823 (14,544)
query : 1 - 3,945 (3,945/3,945)
22 exons
identity = 0.998
5'(0.987;1.000;1.000;1.000;1.000;1.000;1.000;
0.994;0.994;0.989;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.996;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR000742 : Epidermal growth factor-like domain
IPR000884 : Thrombospondin, type 1 repeat
IPR001007 : von Willebrand factor, type C
IPR001791 : Laminin G domain
IPR001881 : EGF-like calcium-binding domain
IPR003367 : Thrombospondin, type 3-like repeat
IPR008859 : Thrombospondin, C-terminal
IPR013032 : EGF-like, conserved site
IPR013320 : Concanavalin A-like lectin/glucanase domain
IPR017897 : Thrombospondin, type 3 repeat
IPR028499 : Thrombospondin-1
IPR028974 : TSP type-3 repeat
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0005576 : Cellular Component : extracellular region
0005615 : Cellular Component : extracellular space
0006954 : Biological Process : inflammatory response
0007155 : Biological Process : cell adhesion
0008201 : Molecular Function : heparin binding
0016525 : Biological Process : negative regulation of angiogenesis
0050840 : Molecular Function : extracellular matrix binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, mito 8, nucl 5, cyto_pero 5, cyto 4,
E.R._mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038125)
HIX0038125
HIT000480865 (
ENST00000397591
)
(Thrombospondin-1 family protein.)
genome : 39,873,280 - 39,874,608 (1,329)
query : 1 - 582 (582/582)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 14.5, extr 9, E.R._mito 8, cyto 4.5,
extr_plas 4.5, cyto_pero 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038125)
HIX0038125
HIT000107697 (
ENST00000260356
)
(Thrombospondin-1 family protein.)
genome : 39,873,294 - 39,891,667 (18,374)
query : 1 - 7,775 (7,775/7,775)
22 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12, mito 8, nucl 5, cyto_pero 4, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038125)
HIX0038125
HIT000329847
(
AB209912
)
(Thrombospondin-1; Precursor;)
genome : 39,873,294 - 39,887,796 (14,503)
query : 1 - 3,904 (3,904/3,904)
22 exons
identity = 0.999
5'(0.993;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994;1.000;1.000;1.000;0.995;1.000;
1.000;1.000;1.000;0.996;1.000;1.000;1.000;
0.996)3'
coverage = 1.000
InterPro :
IPR000742 : Epidermal growth factor-like domain
IPR000884 : Thrombospondin, type 1 repeat
IPR001007 : von Willebrand factor, type C
IPR001791 : Laminin G domain
IPR001881 : EGF-like calcium-binding domain
IPR003367 : Thrombospondin, type 3-like repeat
IPR008859 : Thrombospondin, C-terminal
IPR013032 : EGF-like, conserved site
IPR013320 : Concanavalin A-like lectin/glucanase domain
IPR017897 : Thrombospondin, type 3 repeat
IPR028499 : Thrombospondin-1
IPR028974 : TSP type-3 repeat
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0005576 : Cellular Component : extracellular region
0005615 : Cellular Component : extracellular space
0006954 : Biological Process : inflammatory response
0007155 : Biological Process : cell adhesion
0008201 : Molecular Function : heparin binding
0016525 : Biological Process : negative regulation of angiogenesis
0050840 : Molecular Function : extracellular matrix binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 23.5, cyto_mito 13.6667, nucl 5,
cyto_pero 2.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038125)
HIX0038125
HIT000500487
(
BC136470
)
Representative transcript
(Thrombospondin-1; Precursor;)
genome : 39,873,306 - 39,888,860 (15,555)
query : 1 - 4,956 (4,956/4,956)
22 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR000742 : Epidermal growth factor-like domain
IPR000884 : Thrombospondin, type 1 repeat
IPR001007 : von Willebrand factor, type C
IPR001791 : Laminin G domain
IPR001881 : EGF-like calcium-binding domain
IPR003367 : Thrombospondin, type 3-like repeat
IPR008859 : Thrombospondin, C-terminal
IPR013032 : EGF-like, conserved site
IPR013320 : Concanavalin A-like lectin/glucanase domain
IPR017897 : Thrombospondin, type 3 repeat
IPR028499 : Thrombospondin-1
IPR028974 : TSP type-3 repeat
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0005576 : Cellular Component : extracellular region
0005615 : Cellular Component : extracellular space
0006954 : Biological Process : inflammatory response
0007155 : Biological Process : cell adhesion
0008201 : Molecular Function : heparin binding
0016525 : Biological Process : negative regulation of angiogenesis
0050840 : Molecular Function : extracellular matrix binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12, mito 8, nucl 5, cyto_pero 4, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038125)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : AB005287
Mus
sp. (Mouse) : AK145202
Monodelphis
sp. (Opossum) : ENSMODT00000000832
Oryzias
sp. (Medaka) : ENSORLT00000021092
Oryzias
sp. (Medaka) : ENSORLT00000022312
Pongo
sp. (Orangutan) : ENSPPYT00000007477
Tetraodon
sp. (Tetraodon) : GSTENT00022976001
Takifugu
sp. (Fugu) : SINFRUT00000131044
Gallus
sp. (Chicken) : U76994
Macaca
sp. (Macaque) : XM_001093770
Equus
sp. (Horse) : XM_001503599
Rattus
sp. (Rat) : XM_214778
Pan
sp. (Chimpanzee) : XM_510294
Canis
sp. (Dog) : XM_544610
Danio
sp. (Zebrafish) : XM_685303
HIX0038125
HIT000500486
(
BC136469
)
(Thrombospondin-1; Precursor;)
genome : 39,873,306 - 39,888,856 (15,551)
query : 1 - 4,952 (4,952/4,952)
22 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR000742 : Epidermal growth factor-like domain
IPR000884 : Thrombospondin, type 1 repeat
IPR001007 : von Willebrand factor, type C
IPR001791 : Laminin G domain
IPR001881 : EGF-like calcium-binding domain
IPR003367 : Thrombospondin, type 3-like repeat
IPR008859 : Thrombospondin, C-terminal
IPR013032 : EGF-like, conserved site
IPR013320 : Concanavalin A-like lectin/glucanase domain
IPR017897 : Thrombospondin, type 3 repeat
IPR028499 : Thrombospondin-1
IPR028974 : TSP type-3 repeat
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0005576 : Cellular Component : extracellular region
0005615 : Cellular Component : extracellular space
0006954 : Biological Process : inflammatory response
0007155 : Biological Process : cell adhesion
0008201 : Molecular Function : heparin binding
0016525 : Biological Process : negative regulation of angiogenesis
0050840 : Molecular Function : extracellular matrix binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12, mito 8, nucl 5, cyto_pero 4, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038125)
HIX0038125
HIT000194328
(
M14326
)
(Thrombospondin-1 family protein.)
genome : 39,873,346 - 39,877,767 (4,422)
query : 7 - 1,243 (1,237/1,250)
7 exons
identity = 0.998
5'(0.988;1.000;1.000;1.000;1.000;1.000;0.990)3'
coverage = 0.990
InterPro :
IPR001007 : von Willebrand factor, type C
IPR001791 : Laminin G domain
IPR013320 : Concanavalin A-like lectin/glucanase domain
IPR028499 : Thrombospondin-1
GO :
0005515 : Molecular Function : protein binding
0005615 : Cellular Component : extracellular space
0006954 : Biological Process : inflammatory response
0008201 : Molecular Function : heparin binding
0016525 : Biological Process : negative regulation of angiogenesis
0050840 : Molecular Function : extracellular matrix binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12, mito 8.5, E.R._mito 5, cyto 4.5,
cyto_pero 4.5, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038125)
HIX0038125
HIT000321462
(
X14787
)
(Thrombospondin-1; Precursor;)
genome : 39,873,348 - 39,889,665 (16,318)
query : 1 - 5,722 (5,722/5,722)
22 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.994;0.994;0.994;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.991)3'
coverage = 1.000
InterPro :
IPR000742 : Epidermal growth factor-like domain
IPR000884 : Thrombospondin, type 1 repeat
IPR001007 : von Willebrand factor, type C
IPR001791 : Laminin G domain
IPR001881 : EGF-like calcium-binding domain
IPR003367 : Thrombospondin, type 3-like repeat
IPR008859 : Thrombospondin, C-terminal
IPR013032 : EGF-like, conserved site
IPR013320 : Concanavalin A-like lectin/glucanase domain
IPR017897 : Thrombospondin, type 3 repeat
IPR028499 : Thrombospondin-1
IPR028974 : TSP type-3 repeat
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0005576 : Cellular Component : extracellular region
0005615 : Cellular Component : extracellular space
0006954 : Biological Process : inflammatory response
0007155 : Biological Process : cell adhesion
0008201 : Molecular Function : heparin binding
0016525 : Biological Process : negative regulation of angiogenesis
0050840 : Molecular Function : extracellular matrix binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12, mito 8, nucl 5, cyto_pero 4, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038125)
HIX0038125
HIT000195002
(
M25631
)
(Thrombospondin-1 family protein.)
genome : 39,873,365 - 39,879,618 (6,254)
query : 6 - 1,290 (1,285/1,290)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.996
InterPro :
IPR001007 : von Willebrand factor, type C
IPR001791 : Laminin G domain
IPR013320 : Concanavalin A-like lectin/glucanase domain
IPR028499 : Thrombospondin-1
GO :
0005515 : Molecular Function : protein binding
0005615 : Cellular Component : extracellular space
0006954 : Biological Process : inflammatory response
0008201 : Molecular Function : heparin binding
0016525 : Biological Process : negative regulation of angiogenesis
0050840 : Molecular Function : extracellular matrix binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12, mito 8.5, E.R._mito 5, cyto 4.5,
cyto_pero 4.5, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038125)
HIX0038125
HIT000321055
(
X04665
)
(Thrombospondin-1; Precursor;)
genome : 39,873,384 - 39,888,415 (15,032)
query : 1 - 4,434 (4,434/4,434)
22 exons
identity = 1.000
5'(1.000;1.000;0.998;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.999)3'
coverage = 1.000
InterPro :
IPR000742 : Epidermal growth factor-like domain
IPR000884 : Thrombospondin, type 1 repeat
IPR001007 : von Willebrand factor, type C
IPR001791 : Laminin G domain
IPR001881 : EGF-like calcium-binding domain
IPR003367 : Thrombospondin, type 3-like repeat
IPR008859 : Thrombospondin, C-terminal
IPR013032 : EGF-like, conserved site
IPR013320 : Concanavalin A-like lectin/glucanase domain
IPR017897 : Thrombospondin, type 3 repeat
IPR028499 : Thrombospondin-1
IPR028974 : TSP type-3 repeat
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0005576 : Cellular Component : extracellular region
0005615 : Cellular Component : extracellular space
0006954 : Biological Process : inflammatory response
0007155 : Biological Process : cell adhesion
0008201 : Molecular Function : heparin binding
0016525 : Biological Process : negative regulation of angiogenesis
0050840 : Molecular Function : extracellular matrix binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12, mito 8, nucl 5, cyto_pero 4, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038125)
HIX0038125
HIT000091508
(
BC028145
)
(Thrombospondin-1 family protein.)
genome : 39,874,026 - 39,879,631 (5,606)
query : 2 - 1,238 (1,237/1,238)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR000884 : Thrombospondin, type 1 repeat
IPR001007 : von Willebrand factor, type C
IPR001791 : Laminin G domain
IPR013320 : Concanavalin A-like lectin/glucanase domain
IPR028499 : Thrombospondin-1
GO :
0005515 : Molecular Function : protein binding
0005615 : Cellular Component : extracellular space
0006954 : Biological Process : inflammatory response
0008201 : Molecular Function : heparin binding
0016525 : Biological Process : negative regulation of angiogenesis
0050840 : Molecular Function : extracellular matrix binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12, mito 8.5, E.R._mito 5, cyto 4.5,
cyto_pero 4.5, nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038125)
HIX0038125
HIT000582934 (
ENST00000478845
)
(Thrombospondin, type 1 repeat containing protein.)
genome : 39,877,836 - 39,880,817 (2,982)
query : 1 - 2,154 (2,154/2,154)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12, extr 11, cyto 11, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038125)
HIX0038125
HIT000600981 (
ENST00000497720
)
(Thrombospondin, type 1 repeat containing protein.)
genome : 39,879,632 - 39,880,986 (1,355)
query : 1 - 527 (527/527)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto_nucl 5.5, cyto 5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038125)
HIX0038125
HIT000571386 (
ENST00000466755
)
(Thrombospondin, type 1 repeat containing protein.)
genome : 39,879,653 - 39,880,673 (1,021)
query : 1 - 500 (500/500)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 7.5, cyto_nucl 7, extr_plas 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038125)
HIX0038125
HIT000429686
(
AK310820
)
(Thrombospondin-1 family protein.)
genome : 39,880,801 - 39,887,813 (7,013)
query : 1 - 2,470 (2,470/2,470)
12 exons
identity = 0.998
5'(1.000;1.000;0.991;1.000;1.000;1.000;1.000;
0.996;1.000;1.000;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR000742 : Epidermal growth factor-like domain
IPR001881 : EGF-like calcium-binding domain
IPR003367 : Thrombospondin, type 3-like repeat
IPR008859 : Thrombospondin, C-terminal
IPR013032 : EGF-like, conserved site
IPR013320 : Concanavalin A-like lectin/glucanase domain
IPR017897 : Thrombospondin, type 3 repeat
IPR024731 : EGF domain, merozoite surface protein 1-like
IPR028499 : Thrombospondin-1
IPR028974 : TSP type-3 repeat
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0005576 : Cellular Component : extracellular region
0005615 : Cellular Component : extracellular space
0006954 : Biological Process : inflammatory response
0007155 : Biological Process : cell adhesion
0008201 : Molecular Function : heparin binding
0016525 : Biological Process : negative regulation of angiogenesis
0050840 : Molecular Function : extracellular matrix binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 3, cyto 3, mito 3, lyso 3, cyto_pero 3,
mito_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038125)
HIX0038125
HIT000487854
(
AK293230
)
(EGF-like calcium-binding domain containing protein.)
genome : 39,880,864 - 39,888,763 (7,900)
query : 1 - 1,235 (1,235/1,235)
4 exons
identity = 0.993
5'(1.000;1.000;1.000;0.990)3'
coverage = 1.000
InterPro :
IPR000742 : Epidermal growth factor-like domain
IPR001881 : EGF-like calcium-binding domain
GO :
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038125)
HIX0038125
HIT000593815 (
ENST00000490247
)
(Complement Clr-like EGF domain containing protein.)
genome : 39,881,049 - 39,882,044 (996)
query : 1 - 431 (431/431)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038125)
HIX0038125
HIT000674130 (
ENST00000560894
)
(Thrombospondin, type 3-like repeat containing protein.)
genome : 39,883,129 - 39,883,819 (691)
query : 1 - 537 (537/537)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038125)
HIX0038125
HIT000428479
(
AK309613
)
(Thrombospondin-2; Precursor;)
genome : 39,883,391 - 39,888,207 (4,817)
query : 21 - 939 (919/939)
3 exons
identity = 0.989
5'(0.960;0.973;0.998)3'
coverage = 0.979
InterPro :
IPR003367 : Thrombospondin, type 3-like repeat
IPR008859 : Thrombospondin, C-terminal
IPR013320 : Concanavalin A-like lectin/glucanase domain
IPR028974 : TSP type-3 repeat
GO :
0005509 : Molecular Function : calcium ion binding
0005576 : Cellular Component : extracellular region
0007155 : Biological Process : cell adhesion
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 7, mito 5, cyto_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038125)
HIX0038125
HIT000588571 (
ENST00000484734
)
(Thrombospondin, C-terminal domain containing protein.)
genome : 39,885,246 - 39,887,730 (2,485)
query : 1 - 1,291 (1,291/1,291)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 10.5, cyto_nucl 9.5, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038125)
HIX0038125
HIT000197037
(
M99425
)
(Thrombospondin-1 family protein.)
genome : 39,885,682 - 39,887,823 (2,142)
query : 1 - 687 (687/687)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR008859 : Thrombospondin, C-terminal
IPR013320 : Concanavalin A-like lectin/glucanase domain
IPR028499 : Thrombospondin-1
GO :
0005509 : Molecular Function : calcium ion binding
0005576 : Cellular Component : extracellular region
0005615 : Cellular Component : extracellular space
0006954 : Biological Process : inflammatory response
0007155 : Biological Process : cell adhesion
0008201 : Molecular Function : heparin binding
0016525 : Biological Process : negative regulation of angiogenesis
0050840 : Molecular Function : extracellular matrix binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto 4.5, cyto_nucl 4, pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038125)
HIX0222639
HIT000674007 (
ENST00000560769
)
(Non-protein coding transcript.)
genome : 39,885,781 - 39,886,432 (652)
query : 1 - 281 (281/281)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222639)
HIX0038125
HIT000673001 (
ENST00000559746
)
(Thrombospondin, C-terminal domain containing protein.)
genome : 39,886,269 - 39,887,752 (1,484)
query : 1 - 563 (563/563)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto 10.5, cyto_nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038125)
HIX0038125
HIT000088569
(
BC015134
)
(Hypothetical protein.)
genome : 39,889,780 - 39,890,885 (1,106)
query : 4 - 1,111 (1,108/1,142)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, extr 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038125)
HIX0012116
HIT000052924
(
BC045191
)
(Fibrous sheath-interacting protein 1.)
genome : 39,892,233 - 40,075,031 (182,799)
query : 1 - 2,804 (2,804/2,888)
12 exons
identity = 0.998
3'(0.998;0.996;0.993;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026246 : Fibrous sheath-interacting protein 1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 11.5, nucl 7.5, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012116)
HIX0012116
HIT000213860 (
NM_152597
)
(Fibrous sheath-interacting protein 1.)
genome : 39,892,232 - 40,075,039 (182,808)
query : 1 - 2,813 (2,813/2,813)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 11, nucl 6.5, mito 6, E.R. 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012116)
HIX0012116
HIT000307913 (
ENST00000350221
)
(Fibrous sheath-interacting protein 1.)
genome : 39,892,232 - 40,075,031 (182,800)
query : 1 - 2,805 (2,805/2,805)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 11, nucl 6.5, mito 6, E.R. 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012116)
HIX0012116
HIT000672810 (
ENST00000559547
)
(Non-protein coding transcript.)
genome : 39,892,450 - 39,893,127 (678)
query : 1 - 103 (103/103)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012116)
HIX0012116
HIT000018175
(
AK093308
)
Representative transcript
(Fibrous sheath-interacting protein 1.)
genome : 39,892,994 - 40,075,020 (182,027)
query : 2 - 2,033 (2,032/2,033)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR026246 : Fibrous sheath-interacting protein 1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 11, nucl 6.5, mito 6, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012116)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB071058
Mus
sp. (Mouse) : AF448787
Rattus
sp. (Rat) : BC082080
Bos
sp. (Cow) : ENSBTAT00000015941
Equus
sp. (Horse) : ENSECAT00000026886
Pongo
sp. (Orangutan) : ENSPPYT00000007478
Pan
sp. (Chimpanzee) : XM_001138937
Canis
sp. (Dog) : XM_535430
HIX0012116
HIT000251292
(
AY260140
)
(Fibrous sheath-interacting protein 1.)
genome : 39,893,067 - 40,068,734 (175,668)
query : 7 - 1,775 (1,769/1,775)
11 exons
identity = 0.999
3'(0.984;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.995;1.000)5'
coverage = 0.997
InterPro :
IPR026246 : Fibrous sheath-interacting protein 1
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 11, nucl 6.5, mito 6, E.R. 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012116)
HIX0012116
HIT000672947 (
ENST00000559692
)
(Fibrous sheath-interacting protein 1.)
genome : 40,031,866 - 40,039,648 (7,783)
query : 1 - 367 (367/367)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 12, extr 7, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012116)
HIX0012116
HIT000677343 (
ENST00000564211
)
(Hypothetical protein.)
genome : 40,074,772 - 40,077,818 (3,047)
query : 1 - 3,047 (3,047/3,047)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 14.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012116)
HIX0012117
HIT000016118
(
AK091251
)
Representative transcript
(Conserved hypothetical protein.)
genome : 40,075,107 - 40,077,815 (2,709)
query : 6 - 2,714 (2,709/2,714)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 12.5, extr 9, nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012117)
HIX0038142
HIT000203734 (
NM_007223
)
(Probable G-protein coupled receptor 176; HB-954;)
genome : 40,091,223 - 40,213,093 (121,871)
query : 1 - 4,524 (4,524/4,542)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038142)
HIX0038142
HIT000725093 (
NM_001271854
)
(Probable G-protein coupled receptor 176; HB-954;)
genome : 40,091,223 - 40,213,093 (121,871)
query : 1 - 4,521 (4,521/4,539)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038142)
HIX0038142
HIT000725094 (
NM_001271855
)
(Probable G-protein coupled receptor 176; HB-954;)
genome : 40,091,223 - 40,121,477 (30,255)
query : 1 - 3,682 (3,682/3,700)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038142)
HIX0038142
HIT000262441
(
BC067106
)
Representative transcript
(Probable G-protein coupled receptor 176; HB-954;)
genome : 40,091,238 - 40,212,426 (121,189)
query : 1 - 3,847 (3,847/3,864)
4 exons
identity = 0.997
3'(0.997;1.000;0.983;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038142)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC052037
Bos
sp. (Cow) : BC114912
Pongo
sp. (Orangutan) : ENSPPYT00000007479
Tetraodon
sp. (Tetraodon) : GSTENT00022977001
Danio
sp. (Zebrafish) : NM_001128711
Rattus
sp. (Rat) : S73608
Takifugu
sp. (Fugu) : SINFRUT00000131045
Macaca
sp. (Macaque) : XM_001092588
Monodelphis
sp. (Opossum) : XM_001380920
Equus
sp. (Horse) : XM_001503593
Gallus
sp. (Chicken) : XM_426435
Pan
sp. (Chimpanzee) : XM_510634
Canis
sp. (Dog) : XM_544612
HIX0038142
HIT000115250 (
ENST00000299092
)
(Probable G-protein coupled receptor 176; HB-954;)
genome : 40,091,233 - 40,212,426 (121,194)
query : 1 - 3,844 (3,844/3,844)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038142)
HIX0038142
HIT000101441
(
D38449
)
(Probable G-protein coupled receptor 176; HB-954;)
genome : 40,092,931 - 40,213,093 (120,163)
query : 1 - 2,816 (2,816/2,816)
3 exons
identity = 1.000
3'(0.999;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038142)
HIX0038142
HIT000674330 (
ENST00000561100
)
(Probable G-protein coupled receptor 176; HB-954;)
genome : 40,092,931 - 40,213,093 (120,163)
query : 1 - 2,816 (2,816/2,816)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038142)
HIX0038142
HIT000497339
(
AK302715
)
(Probable G-protein coupled receptor 176; HB-954;)
genome : 40,093,150 - 40,121,477 (28,328)
query : 1 - 1,755 (1,755/1,755)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038142)
HIX0038142
HIT000642625 (
ENST00000543580
)
(Probable G-protein coupled receptor 176; HB-954;)
genome : 40,093,150 - 40,121,477 (28,328)
query : 1 - 1,755 (1,755/1,755)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038142)
HIX0038142
HIT000721360
(
JQ308174
)
(Probable G-protein coupled receptor 176; HB-954;)
genome : 40,093,333 - 40,212,227 (118,895)
query : 1 - 1,548 (1,548/1,548)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038142)
HIX0038142
HIT000671331 (
ENST00000558041
)
(Probable G-protein coupled receptor 176; HB-954;)
genome : 40,093,828 - 40,212,152 (118,325)
query : 1 - 828 (828/828)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038142)
HIX0038142
HIT000673967 (
ENST00000560729
)
(Probable G-protein coupled receptor 176; HB-954;)
genome : 40,094,025 - 40,186,728 (92,704)
query : 1 - 1,035 (1,035/1,035)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0038142)
HIX0222557
HIT000673153 (
ENST00000559899
)
(Hypothetical short protein.)
genome : 40,105,424 - 40,107,630 (2,207)
query : 1 - 567 (567/567)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 9, extr_plas 9, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222557)
HIX0012118
HIT000097406
(
BC042903
)
Representative transcript
(Conserved hypothetical protein.)
genome : 40,213,243 - 40,217,100 (3,858)
query : 1 - 2,730 (2,730/2,745)
2 exons
identity = 0.999
5'(1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, extr 9, nucl 2, mito 2, golg 2, mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012118)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : CR861040
HIX0012118
HIT000602204 (
ENST00000499797
)
(Conserved hypothetical protein.)
genome : 40,213,243 - 40,217,100 (3,858)
query : 1 - 2,730 (2,730/2,730)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, extr 9, nucl 2, mito 2, golg 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012118)
HIX0012118
HIT000025894
(
AL137606
)
(Conserved hypothetical protein.)
genome : 40,213,271 - 40,218,080 (4,810)
query : 1 - 4,810 (4,810/4,829)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, extr 9, cyto_pero 9, cyto_plas 9,
cyto_golg 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012118)
HIX0222459
HIT000671950 (
ENST00000558675
)
(Conserved hypothetical protein.)
genome : 40,213,271 - 40,218,081 (4,811)
query : 1 - 4,811 (4,811/4,811)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222459)
HIX0012118
HIT000444587
(
DQ578056
)
(Non-protein coding transcript.)
genome : 40,213,682 - 40,213,712 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012118)
HIX0012119
HIT000265738
(
BC078179
)
(Eukaryotic translation initiation factor 2-alpha kinase 4.)
genome : 40,226,347 - 40,267,624 (41,278)
query : 1 - 3,542 (3,542/3,556)
11 exons
identity = 1.000
5'(0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR006575 : RWD domain
IPR016135 : Ubiquitin-conjugating enzyme/RWD-like
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 16.5, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012119)
HIX0012119
HIT000672884 (
ENST00000559624
)
(RWD domain containing protein.)
genome : 40,226,347 - 40,267,630 (41,284)
query : 1 - 3,548 (3,548/3,548)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 16.5, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012119)
HIX0012119
HIT000260213
(
BC061591
)
(RWD domain containing protein.)
genome : 40,226,354 - 40,246,149 (19,796)
query : 1 - 601 (601/617)
5 exons
identity = 0.998
5'(0.995;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR006575 : RWD domain
IPR016135 : Ubiquitin-conjugating enzyme/RWD-like
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto 10
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012119)
HIX0012119
eHIT000005771 ( ESTsASS_15_874 )
(Non-protein coding transcript.)
genome : 40,226,356 - 40,327,796 (101,441)
query : 1 - 5,476 (5,476/5,476)
39 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012119)
ESTs used for assembly :
DB004156,DW449516,CR995205,DA991204
CB125780,BX369760,BM452097,AA306702
BM449754,DA243002,BF689834,BF692597
BM766136,BG257612,CX783573,FN051400
BM978043,BQ950911,BM674337,BQ941696
CN422382,BG259652,BU945041,BQ951986
BU619345,BI869062,BQ428507,BU902109
CN373499,BE390225,BG751050,DB281766
DA349761,DA927267,AA376437,R19609
BF856695,BM845206,BQ641337,BG035829
BX388401,BX419551,AA926944,DA191236
BE009278
HIX0012119
HIT000673887 (
ENST00000560648
)
(RWD domain containing protein.)
genome : 40,226,377 - 40,239,096 (12,720)
query : 1 - 687 (687/687)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 10, nucl 9.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012119)
HIX0222567
HIT000673236 (
ENST00000559984
)
(Histone H3/CENP-A family protein.)
genome : 40,243,576 - 40,243,909 (334)
query : 1 - 334 (334/334)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222567)
HIX0012119
HIT000026131
(
AL157497
)
Representative transcript
(Eukaryotic translation initiation factor 2-alpha kinase 4.)
genome : 40,268,928 - 40,327,797 (58,870)
query : 1 - 3,331 (3,331/3,351)
28 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.992;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR004154 : Anticodon-binding
IPR008271 : Serine/threonine-protein kinase, active site
IPR024435 : Histidyl tRNA synthetase-related domain
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, nucl 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012119)
HIX0012119
HIT000090004
(
BC019914
)
(Hypothetical short protein.)
genome : 40,269,180 - 40,270,490 (1,311)
query : 1 - 1,305 (1,305/1,325)
1 exon
identity = 0.982
5'(0.982)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 9, cyto_nucl 8.5, cyto 8, nucl 7, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012119)
HIX0012119
HIT000671093 (
ENST00000557801
)
(Hypothetical short protein.)
genome : 40,269,180 - 40,270,493 (1,314)
query : 1 - 1,314 (1,314/1,314)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, cyto_nucl 9.5, extr 9, nucl 5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012119)
HIX0012119
HIT000034299
(
BC009350
)
(Histidyl tRNA synthetase-related domain containing protein.)
genome : 40,280,239 - 40,327,792 (47,554)
query : 1 - 2,999 (2,999/3,016)
25 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.994;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR004154 : Anticodon-binding
IPR008271 : Serine/threonine-protein kinase, active site
IPR024435 : Histidyl tRNA synthetase-related domain
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 13, nucl 7, cysk 3, extr 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012119)
HIX0012119
HIT000010285
(
AK027011
)
(Histidyl tRNA synthetase-related domain containing protein.)
genome : 40,280,271 - 40,327,792 (47,522)
query : 1 - 2,968 (2,968/2,986)
25 exons
identity = 0.998
5'(1.000;0.990;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.993)3'
coverage = 1.000
InterPro :
IPR004154 : Anticodon-binding
IPR008271 : Serine/threonine-protein kinase, active site
IPR024435 : Histidyl tRNA synthetase-related domain
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_plas 11, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012119)
HIX0012119
HIT000057695
(
BX649048
)
(Eukaryotic translation initiation factor 2-alpha kinase 4.)
genome : 40,283,367 - 40,327,792 (44,426)
query : 1 - 4,374 (4,374/4,391)
22 exons
identity = 0.997
5'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.992;
1.000;1.000;1.000;1.000;1.000;1.000;0.992;
0.996)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR004154 : Anticodon-binding
IPR024435 : Histidyl tRNA synthetase-related domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto_pero 5.5, extr 5, cyto 5, pero 4,
nucl 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012119)
HIX0012119
HIT000671905 (
ENST00000558629
)
(Histidyl tRNA synthetase-related domain containing protein.)
genome : 40,283,367 - 40,327,792 (44,426)
query : 1 - 4,374 (4,374/4,374)
22 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto_pero 5.5, extr 5, cyto 5, pero 4,
nucl 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012119)
HIX0012119
HIT000671835 (
ENST00000558557
)
(Histidyl tRNA synthetase-related domain containing protein.)
genome : 40,294,592 - 40,327,792 (33,201)
query : 1 - 2,449 (2,449/2,449)
17 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21.5, cyto_mito 14.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012119)
HIX0012119
HIT000672578 (
ENST00000559311
)
(Conserved hypothetical protein.)
genome : 40,294,592 - 40,300,394 (5,803)
query : 1 - 535 (535/535)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, extr 10, cyto 7.5, cyto_nucl 5, extr_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012119)
HIX0012119
HIT000015141
(
AK074361
)
(Eukaryotic translation initiation factor 2-alpha kinase 4.)
genome : 40,294,844 - 40,327,792 (32,949)
query : 1 - 2,198 (2,198/2,224)
17 exons
identity = 0.996
5'(1.000;0.992;1.000;0.994;1.000;1.000;1.000;
1.000;0.992;1.000;1.000;1.000;0.990;1.000;
1.000;1.000;0.991)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR004154 : Anticodon-binding
IPR024435 : Histidyl tRNA synthetase-related domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21.5, cyto_mito 14.5, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012119)
HIX0012119
HIT000245526
(
AJ243428
)
(Histidyl tRNA synthetase-related domain containing protein.)
genome : 40,295,460 - 40,327,797 (32,338)
query : 1 - 2,161 (2,161/2,162)
17 exons
identity = 0.999
5'(1.000;0.980;1.000;1.000;1.000;1.000;1.000;
1.000;0.992;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR004154 : Anticodon-binding
IPR024435 : Histidyl tRNA synthetase-related domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, mito 5, nucl 3, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012119)
HIX0012119
HIT000025964
(
AL137676
)
(Conserved hypothetical protein.)
genome : 40,299,228 - 40,327,792 (28,565)
query : 1 - 1,908 (1,908/1,917)
14 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.994;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 7, mito 4, cyto_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012119)
HIX0012119
HIT000672017 (
ENST00000558743
)
(Histidyl tRNA synthetase-related domain containing protein.)
genome : 40,312,727 - 40,314,798 (2,072)
query : 1 - 581 (581/581)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, plas 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012119)
HIX0012119
HIT000672303 (
ENST00000559032
)
(Conserved hypothetical protein.)
genome : 40,313,744 - 40,314,822 (1,079)
query : 1 - 1,079 (1,079/1,089)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 0.991
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012119)
HIX0012119
HIT000025915
(
AL137627
)
(Eukaryotic translation initiation factor 2-alpha kinase 4.)
genome : 40,318,175 - 40,327,792 (9,618)
query : 13 - 1,083 (1,071/1,138)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.989
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 12.5, mito 6, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012119)
HIX0012119
HIT000672097 (
ENST00000558823
)
(Conserved hypothetical protein.)
genome : 40,322,594 - 40,327,669 (5,076)
query : 1 - 625 (625/638)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, mito 11, cyto_nucl 8.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012119)
HIX0202180
HIT000199995 (
NM_003134
)
(Signal recognition particle, SRP14 subunit family protein.)
genome : 40,327,891 - 40,331,389 (3,499)
query : 1 - 1,126 (1,126/1,126)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 29.5, cyto_nucl 16
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202180)
HIX0202180
HIT000110216 (
ENST00000267884
)
(Signal recognition particle, SRP14 subunit family protein.)
genome : 40,327,940 - 40,331,389 (3,450)
query : 1 - 1,077 (1,077/1,077)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 29.5, cyto_nucl 16
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202180)
HIX0202180
HIT000059839
(
AB061546
)
(Signal recognition particle 14 kDa protein; SRP14; 18 kDa Alu RNA-binding protein;)
genome : 40,328,242 - 40,331,389 (3,148)
query : 2 - 776 (775/800)
5 exons
identity = 0.992
3'(0.991;1.000;0.982;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR003210 : Signal recognition particle, SRP14 subunit
IPR009018 : Signal recognition particle, SRP9/SRP14 subunit
GO :
0005786 : Cellular Component : signal recognition particle, endoplasmic reticulum targeting
0006614 : Biological Process : SRP-dependent cotranslational protein targeting to membrane
0008312 : Molecular Function : 7S RNA binding
0030942 : Molecular Function : endoplasmic reticulum signal peptide binding
0048500 : Cellular Component : signal recognition particle
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 29.5, cyto_nucl 16
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202180)
HIX0202180
HIT000099279
(
BC051006
)
(Signal recognition particle 14 kDa protein.)
genome : 40,328,242 - 40,331,365 (3,124)
query : 1 - 791 (791/810)
6 exons
identity = 0.995
3'(0.996;1.000;1.000;0.991;0.986;1.000)5'
coverage = 1.000
InterPro :
IPR003210 : Signal recognition particle, SRP14 subunit
IPR009018 : Signal recognition particle, SRP9/SRP14 subunit
GO :
0005786 : Cellular Component : signal recognition particle, endoplasmic reticulum targeting
0006614 : Biological Process : SRP-dependent cotranslational protein targeting to membrane
0008312 : Molecular Function : 7S RNA binding
0030942 : Molecular Function : endoplasmic reticulum signal peptide binding
0048500 : Cellular Component : signal recognition particle
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, extr 4, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202180)
HIX0202180
HIT000336162
(
BC100031
)
(Signal recognition particle 14 kDa protein; SRP14; 18 kDa Alu RNA-binding protein;)
genome : 40,328,239 - 40,331,341 (3,103)
query : 3 - 732 (730/748)
5 exons
identity = 0.999
3'(1.000;1.000;0.991;1.000;1.000)5'
coverage = 0.997
InterPro :
IPR003210 : Signal recognition particle, SRP14 subunit
IPR009018 : Signal recognition particle, SRP9/SRP14 subunit
GO :
0005786 : Cellular Component : signal recognition particle, endoplasmic reticulum targeting
0006614 : Biological Process : SRP-dependent cotranslational protein targeting to membrane
0008312 : Molecular Function : 7S RNA binding
0030942 : Molecular Function : endoplasmic reticulum signal peptide binding
0048500 : Cellular Component : signal recognition particle
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 29.5, cyto_nucl 16
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202180)
HIX0202180
HIT000051396
(
BC035495
)
Representative transcript
(Signal recognition particle 14 kDa protein; SRP14; 18 kDa Alu RNA-binding protein;)
genome : 40,328,242 - 40,331,359 (3,118)
query : 1 - 745 (745/763)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003210 : Signal recognition particle, SRP14 subunit
IPR009018 : Signal recognition particle, SRP9/SRP14 subunit
GO :
0005786 : Cellular Component : signal recognition particle, endoplasmic reticulum targeting
0006614 : Biological Process : SRP-dependent cotranslational protein targeting to membrane
0008312 : Molecular Function : 7S RNA binding
0030942 : Molecular Function : endoplasmic reticulum signal peptide binding
0048500 : Cellular Component : signal recognition particle
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 29.5, cyto_nucl 16
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202180)
HIX0202180
HIT000264537
(
BC071716
)
(Signal recognition particle 14 kDa protein; SRP14; 18 kDa Alu RNA-binding protein;)
genome : 40,328,242 - 40,331,339 (3,098)
query : 1 - 725 (725/739)
5 exons
identity = 0.996
3'(0.996;1.000;0.991;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003210 : Signal recognition particle, SRP14 subunit
IPR009018 : Signal recognition particle, SRP9/SRP14 subunit
GO :
0005786 : Cellular Component : signal recognition particle, endoplasmic reticulum targeting
0006614 : Biological Process : SRP-dependent cotranslational protein targeting to membrane
0008312 : Molecular Function : 7S RNA binding
0030942 : Molecular Function : endoplasmic reticulum signal peptide binding
0048500 : Cellular Component : signal recognition particle
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 29.5, cyto_nucl 16
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202180)
HIX0202180
HIT000217808
(
U07857
)
(Signal recognition particle 14 kDa protein; SRP14; 18 kDa Alu RNA-binding protein;)
genome : 40,328,243 - 40,331,339 (3,097)
query : 1 - 723 (723/726)
5 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.978)5'
coverage = 0.996
InterPro :
IPR003210 : Signal recognition particle, SRP14 subunit
IPR009018 : Signal recognition particle, SRP9/SRP14 subunit
GO :
0005786 : Cellular Component : signal recognition particle, endoplasmic reticulum targeting
0006614 : Biological Process : SRP-dependent cotranslational protein targeting to membrane
0008312 : Molecular Function : 7S RNA binding
0030942 : Molecular Function : endoplasmic reticulum signal peptide binding
0048500 : Cellular Component : signal recognition particle
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 29.5, cyto_nucl 16
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202180)
HIX0202180
HIT000671805 (
ENST00000558527
)
(Signal recognition particle, SRP9/SRP14 subunit domain containing protein.)
genome : 40,328,242 - 40,331,365 (3,124)
query : 1 - 791 (791/791)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, extr 5, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202180)
HIX0202180
HIT000323371
(
X73459
)
(Signal recognition particle 14 kDa protein; SRP14; 18 kDa Alu RNA-binding protein;)
genome : 40,328,243 - 40,331,336 (3,094)
query : 1 - 721 (721/721)
5 exons
identity = 0.996
3'(0.996;1.000;0.991;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003210 : Signal recognition particle, SRP14 subunit
IPR009018 : Signal recognition particle, SRP9/SRP14 subunit
GO :
0005786 : Cellular Component : signal recognition particle, endoplasmic reticulum targeting
0006614 : Biological Process : SRP-dependent cotranslational protein targeting to membrane
0008312 : Molecular Function : 7S RNA binding
0030942 : Molecular Function : endoplasmic reticulum signal peptide binding
0048500 : Cellular Component : signal recognition particle
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 29.5, cyto_nucl 16
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202180)
HIX0202180
HIT000671994 (
ENST00000558720
)
(Signal recognition particle, SRP14 subunit family protein.)
genome : 40,328,243 - 40,331,251 (3,009)
query : 1 - 780 (780/780)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 10.5, extr 9, cyto 9, nucl 8, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202180)
HIX0202180
HIT000674011 (
ENST00000560773
)
(Signal recognition particle, SRP14 subunit family protein.)
genome : 40,328,444 - 40,331,357 (2,914)
query : 1 - 468 (468/468)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202180)
HIX0202180
HIT000672704 (
ENST00000559439
)
(Signal recognition particle, SRP14 subunit family protein.)
genome : 40,328,455 - 40,331,074 (2,620)
query : 1 - 743 (743/743)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202180)
HIX0202180
HIT000672740 (
ENST00000559475
)
(Signal recognition particle, SRP9/SRP14 subunit domain containing protein.)
genome : 40,328,505 - 40,331,152 (2,648)
query : 1 - 466 (466/466)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto 7, extr 5, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202180)
HIX0202180
HIT000487604
(
AB451391
)
(Signal recognition particle 14 kDa protein; SRP14; 18 kDa Alu RNA-binding protein;)
genome : 40,328,537 - 40,331,317 (2,781)
query : 1 - 408 (408/408)
5 exons
identity = 0.993
3'(0.988;1.000;0.991;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003210 : Signal recognition particle, SRP14 subunit
IPR009018 : Signal recognition particle, SRP9/SRP14 subunit
GO :
0005786 : Cellular Component : signal recognition particle, endoplasmic reticulum targeting
0006614 : Biological Process : SRP-dependent cotranslational protein targeting to membrane
0008312 : Molecular Function : 7S RNA binding
0030942 : Molecular Function : endoplasmic reticulum signal peptide binding
0048500 : Cellular Component : signal recognition particle
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 29.5, cyto_nucl 16
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202180)
HIX0202180
HIT000632777_02 (
ENST00000533701
)
(Signal recognition particle, SRP14 subunit family protein.)
genome : 40,328,596 - 40,331,318 (2,723)
query : 1 - 349 (349/349)
5 exons
identity = 0.957
3'(0.981;0.970;0.947;0.918;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 13, nucl 10.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202180)
HIX0202180
HIT000672352 (
ENST00000559081
)
(Signal recognition particle, SRP14 subunit family protein.)
genome : 40,328,889 - 40,331,354 (2,466)
query : 1 - 578 (578/578)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 6, mito 3, cyto_pero 3, cyto_plas 3,
cyto_golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202180)
HIX0202180
HIT000671528 (
ENST00000558243
)
(Signal recognition particle, SRP14 subunit family protein.)
genome : 40,329,187 - 40,331,363 (2,177)
query : 1 - 770 (770/770)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 12, cyto_nucl 10.5, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0202180)
HIX0211932
HIT000726120 (
NR_040059
)
(Conserved hypothetical protein.)
genome : 40,331,512 - 40,359,710 (28,199)
query : 1 - 2,819 (2,819/2,819)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 13, nucl 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211932)
HIX0211932
HIT000726121 (
NR_040060
)
(Conserved hypothetical protein.)
genome : 40,331,512 - 40,359,710 (28,199)
query : 1 - 2,536 (2,536/2,536)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 13, nucl 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211932)
HIX0211932
HIT000047569
(
AK127696
)
Representative transcript
(Conserved hypothetical protein.)
genome : 40,331,512 - 40,359,491 (27,980)
query : 1 - 2,315 (2,315/2,315)
3 exons
identity = 0.999
5'(0.978;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 13, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211932)
HIX0211932
HIT000604482 (
ENST00000504245
)
(Conserved hypothetical protein.)
genome : 40,331,512 - 40,359,491 (27,980)
query : 1 - 2,317 (2,317/2,317)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 13, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211932)
HIX0211932
HIT000726122 (
NR_040061
)
(Hypothetical short protein.)
genome : 40,331,512 - 40,349,200 (17,689)
query : 1 - 706 (706/723)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 8.16667, cyto 7.5, nucl 5.5,
cyto_pero 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211932)
HIX0211932
HIT000726123 (
NR_040062
)
(Hypothetical short protein.)
genome : 40,331,512 - 40,349,200 (17,689)
query : 1 - 558 (558/572)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211932)
HIX0211932
HIT000673586 (
ENST00000560341
)
(Hypothetical short protein.)
genome : 40,331,550 - 40,349,184 (17,635)
query : 1 - 652 (652/652)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 8.16667, cyto 7.5, nucl 5.5,
cyto_pero 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211932)
HIX0211932
HIT000672284 (
ENST00000559012
)
(Hypothetical short protein.)
genome : 40,356,588 - 40,357,906 (1,319)
query : 1 - 700 (700/700)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, nucl 7.5, cyto_nucl 5.5, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211932)
HIX0222598
HIT000673621 (
ENST00000560376
)
(Conserved hypothetical protein.)
genome : 40,367,405 - 40,370,905 (3,501)
query : 1 - 864 (864/864)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, nucl 2, mito 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222598)
HIX0012120
HIT000315794 (
NM_001003943
)
(Bcl-2-modifying factor;)
genome : 40,380,093 - 40,401,085 (20,993)
query : 1 - 4,534 (4,534/4,549)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 12.5, extr 12, nucl 6.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012120)
HIX0012120
HIT000260085
(
BC060783
)
(Bcl-2-modifying factor;)
genome : 40,380,093 - 40,401,073 (20,981)
query : 3 - 4,683 (4,681/4,698)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;0.980)5'
coverage = 1.000
InterPro :
IPR028192 : Bcl-2-modifying factor
GO :
0006915 : Biological Process : apoptotic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 11, cyto_nucl 8.5, extr_plas 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012120)
HIX0012120
HIT000315791 (
NM_001003940
)
(Bcl-2-modifying factor;)
genome : 40,380,093 - 40,401,075 (20,983)
query : 1 - 4,685 (4,685/4,700)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 11, cyto_nucl 8.5, extr_plas 8.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012120)
HIX0012120
HIT000211374 (
NM_033503
)
(Bcl-2-modifying factor;)
genome : 40,380,093 - 40,398,639 (18,547)
query : 1 - 4,536 (4,536/4,551)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 11, cyto_nucl 8.5, extr_plas 8.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012120)
HIX0012120
HIT000315793 (
NM_001003942
)
(Bcl-2-modifying factor;)
genome : 40,380,093 - 40,398,287 (18,195)
query : 1 - 4,387 (4,387/4,402)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 11, cyto_nucl 9, nucl 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012120)
HIX0012120
HIT000264001
(
BC070043
)
Representative transcript
(Bcl-2-modifying factor;)
genome : 40,380,093 - 40,401,075 (20,983)
query : 1 - 4,683 (4,683/4,697)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;0.980)5'
coverage = 1.000
InterPro :
IPR028192 : Bcl-2-modifying factor
GO :
0006915 : Biological Process : apoptotic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 11, cyto_nucl 8.5, extr_plas 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012120)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : AB238943
Rattus
sp. (Rat) : AF506761
Mus
sp. (Mouse) : BC079650
Equus
sp. (Horse) : ENSECAT00000024695
Pongo
sp. (Orangutan) : ENSPPYT00000007483
Monodelphis
sp. (Opossum) : XM_001380960
Canis
sp. (Dog) : XM_843970
Macaca
sp. (Macaque) : XR_011545
Pan
sp. (Chimpanzee) : XR_023049
HIX0012120
HIT000308929 (
ENST00000354670
)
(Bcl-2-modifying factor;)
genome : 40,380,091 - 40,401,075 (20,985)
query : 1 - 4,687 (4,687/4,687)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 11, cyto_nucl 8.5, extr_plas 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012120)
HIX0012120
HIT000007746
(
AK024472
)
(Bcl-2-modifying factor;)
genome : 40,380,094 - 40,398,649 (18,556)
query : 1 - 4,545 (4,545/4,545)
4 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR028192 : Bcl-2-modifying factor
GO :
0006915 : Biological Process : apoptotic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 11, cyto_nucl 8.5, extr_plas 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012120)
HIX0012120
HIT000480849 (
ENST00000397573
)
(Bcl-2-modifying factor;)
genome : 40,380,094 - 40,398,649 (18,556)
query : 1 - 4,545 (4,545/4,545)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 11, cyto_nucl 8.5, extr_plas 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012120)
HIX0012120
HIT000103457 (
ENST00000220446
)
(Bcl-2-modifying factor;)
genome : 40,380,094 - 40,398,287 (18,194)
query : 1 - 4,288 (4,288/4,288)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 12.5, extr 12, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012120)
HIX0222484
HIT000672294 (
ENST00000559022
)
(Non-protein coding transcript.)
genome : 40,381,033 - 40,381,587 (555)
query : 1 - 461 (461/461)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222484)
HIX0012120
HIT000674586 (
ENST00000561360
)
(Bcl-2-modifying factor;)
genome : 40,383,877 - 40,398,846 (14,970)
query : 1 - 735 (735/735)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 11, cyto_nucl 8.5, extr_plas 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012120)
HIX0012120
HIT000263480
(
BC069328
)
(Bcl-2-modifying factor;)
genome : 40,383,919 - 40,398,623 (14,705)
query : 1 - 748 (748/748)
4 exons
identity = 0.997
3'(1.000;1.000;0.997;0.992)5'
coverage = 1.000
InterPro :
IPR028192 : Bcl-2-modifying factor
GO :
0006915 : Biological Process : apoptotic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 11, cyto_nucl 8.5, extr_plas 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012120)
HIX0012120
HIT000263656
(
BC069505
)
(Bcl-2-modifying factor;)
genome : 40,383,919 - 40,398,623 (14,705)
query : 1 - 694 (694/694)
4 exons
identity = 0.999
3'(1.000;1.000;0.997;1.000)5'
coverage = 1.000
InterPro :
IPR028192 : Bcl-2-modifying factor
GO :
0006915 : Biological Process : apoptotic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 11, cyto_nucl 8.5, extr_plas 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012120)
HIX0012120
HIT000674508 (
ENST00000561282
)
(Bcl-2-modifying factor;)
genome : 40,383,919 - 40,398,623 (14,705)
query : 1 - 747 (747/747)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 11, cyto_nucl 8.5, extr_plas 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012120)
HIX0012120
HIT000672048 (
ENST00000558774
)
(Bcl-2-modifying factor;)
genome : 40,383,935 - 40,401,093 (17,159)
query : 1 - 671 (671/671)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 12.5, extr 12, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012120)
HIX0012120
HIT000338073
(
BC104985
)
(Bcl-2-modifying factor;)
genome : 40,383,956 - 40,398,294 (14,339)
query : 15 - 608 (594/608)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.977
InterPro :
IPR028192 : Bcl-2-modifying factor
GO :
0006915 : Biological Process : apoptotic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 11, cyto_nucl 8.5, extr_plas 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012120)
HIX0012120
HIT000338071
(
BC104983
)
(Bcl-2-modifying factor;)
genome : 40,383,960 - 40,398,294 (14,335)
query : 15 - 604 (590/604)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.977
InterPro :
IPR028192 : Bcl-2-modifying factor
GO :
0006915 : Biological Process : apoptotic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 11, cyto_nucl 8.5, extr_plas 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012120)
HIX0012120
HIT000083330
(
AY029254
)
(Bcl-2-modifying factor;)
genome : 40,383,988 - 40,398,287 (14,300)
query : 1 - 555 (555/555)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR028192 : Bcl-2-modifying factor
GO :
0006915 : Biological Process : apoptotic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 11, cyto_nucl 8.5, extr_plas 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012120)
HIX0012120
HIT000251088
(
AY222040
)
(Bcl-2-modifying factor;)
genome : 40,383,988 - 40,398,287 (14,300)
query : 1 - 492 (492/492)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR028192 : Bcl-2-modifying factor
GO :
0006915 : Biological Process : apoptotic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 11, cyto_nucl 9, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012120)
HIX0012120
HIT000529349 (
ENST00000431415
)
(Bcl-2-modifying factor;)
genome : 40,383,988 - 40,398,287 (14,300)
query : 1 - 492 (492/492)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 11, cyto_nucl 9, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012120)
HIX0012120
HIT000672956 (
ENST00000559701
)
(Bcl-2-modifying factor isoform bmf-3.)
genome : 40,383,992 - 40,401,080 (17,089)
query : 1 - 630 (630/630)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 12.5, extr 12, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012120)
HIX0012120
HIT000251089
(
AY222041
)
(Bcl-2-modifying factor isoform bmf-3.)
genome : 40,383,992 - 40,398,287 (14,296)
query : 1 - 390 (390/390)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
InterPro :
IPR028192 : Bcl-2-modifying factor
GO :
0006915 : Biological Process : apoptotic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 12.5, extr 12, nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012120)
HIX0012120
HIT000671160 (
ENST00000557870
)
(Conserved hypothetical protein.)
genome : 40,398,104 - 40,401,080 (2,977)
query : 1 - 505 (505/505)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012120)
HIX0012120
HIT000673672 (
ENST00000560430
)
(Hypothetical short protein.)
genome : 40,398,249 - 40,400,905 (2,657)
query : 1 - 490 (490/490)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 14, extr 9, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012120)
HIX0012120
HIT000671347 (
ENST00000558057
)
(Non-protein coding transcript.)
genome : 40,400,244 - 40,401,079 (836)
query : 1 - 450 (450/450)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012120)
HIX0222542
HIT000673002 (
ENST00000559747
)
(Hypothetical protein.)
genome : 40,425,969 - 40,427,415 (1,447)
query : 1 - 1,447 (1,447/1,447)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 12, cyto 9, extr_plas 8.5, mito 6, extr 3,
E.R._mito 3, mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222542)
HIX0222150
HIT000673369 (
ENST00000560120
)
(Mitotic checkpoint serine/threonine protein kinase Bub1/Mitotic spindle checkpoint component Mad3 family protein.)
genome : 40,453,224 - 40,468,822 (15,599)
query : 1 - 583 (583/583)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16, nucl 7.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222150)
HIX0222150
HIT000672679 (
ENST00000559414
)
(Mad3/BUB1 homology region 1 domain containing protein.)
genome : 40,453,244 - 40,468,751 (15,508)
query : 1 - 526 (526/526)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, extr 13, cyto_nucl 11, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222150)
HIX0222150
HIT000671989 (
ENST00000558715
)
(Mitotic checkpoint serine/threonine protein kinase Bub1/Mitotic spindle checkpoint component Mad3 family protein.)
genome : 40,453,268 - 40,462,800 (9,533)
query : 1 - 580 (580/580)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 12.5, extr 10, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222150)
HIX0222110
HIT000672988 (
ENST00000559733
)
(Conserved hypothetical protein.)
genome : 40,475,915 - 40,494,835 (18,921)
query : 1 - 786 (786/786)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 15, nucl 10.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222110)
HIX0222110
HIT000672726 (
ENST00000559461
)
(Conserved hypothetical protein.)
genome : 40,475,925 - 40,477,682 (1,758)
query : 1 - 477 (477/477)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 14.5, nucl 9, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222110)
HIX0222110
HIT000671140 (
ENST00000557848
)
(Conserved hypothetical protein.)
genome : 40,477,527 - 40,488,935 (11,409)
query : 1 - 633 (633/633)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, nucl 2.5, cyto_nucl 2.5, extr 2, pero 2,
golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222110)
HIX0222110
HIT000673027 (
ENST00000559772
)
(Conserved hypothetical protein.)
genome : 40,477,673 - 40,492,490 (14,818)
query : 1 - 560 (560/560)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, extr 8, mito 7, cyto_nucl 7, E.R. 3, nucl 2,
pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222110)
HIX0222110
HIT000672244 (
ENST00000558972
)
(Conserved hypothetical protein.)
genome : 40,492,239 - 40,498,475 (6,237)
query : 1 - 630 (630/630)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 11, extr 9, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222110)
HIX0222406
HIT000671438 (
ENST00000558151
)
(Conserved hypothetical protein.)
genome : 40,509,628 - 40,512,845 (3,218)
query : 11 - 439 (429/439)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 8, cyto 7.5, nucl 3.5,
E.R._mito 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222406)
HIX0026823
HIT000044504
(
AK124631
)
Representative transcript
(Conserved hypothetical protein.)
genome : 40,524,283 - 40,528,308 (4,026)
query : 1 - 3,902 (3,902/3,902)
2 exons
identity = 0.999
5'(0.997;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 12, extr 11, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026823)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : ENSPTRT00000058606
HIX0222800
HIT000681080 (
ENST00000568093
)
(Conserved hypothetical protein.)
genome : 40,524,283 - 40,528,308 (4,026)
query : 1 - 3,902 (3,902/3,902)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12, nucl 10, cyto 9.5, extr 9,
cyto_pero 7.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222800)
HIX0221931
HIT000674456 (
ENST00000561230
)
(CRIB domain containing protein.)
genome : 40,530,960 - 40,558,152 (27,193)
query : 1 - 891 (891/891)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221931)
HIX0221931
HIT000671345 (
ENST00000558055
)
(CRIB domain containing protein.)
genome : 40,531,255 - 40,558,204 (26,950)
query : 1 - 565 (565/565)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221931)
HIX0221931
HIT000725342 (
NM_001276718
)
(CRIB domain containing protein.)
genome : 40,531,292 - 40,569,688 (38,397)
query : 1 - 4,216 (4,216/4,228)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221931)
HIX0221931
HIT000249810
(
AK131522
)
(Serine/threonine-protein kinase PAK 6; EC=2.7.11.1; PAK-5; p21-activated kinase 6; PAK-6;)
genome : 40,531,292 - 40,569,687 (38,396)
query : 1 - 4,225 (4,225/4,225)
10 exons
identity = 0.997
5'(0.999;1.000;1.000;0.995;1.000;0.998;1.000;
1.000;1.000;0.994)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000095 : CRIB domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221931)
HIX0221931
HIT000553511 (
ENST00000455577
)
(CRIB domain containing protein.)
genome : 40,531,292 - 40,569,687 (38,396)
query : 1 - 4,215 (4,215/4,215)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 16
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221931)
HIX0221931
HIT000673591 (
ENST00000560346
)
(CRIB domain containing protein.)
genome : 40,531,621 - 40,569,686 (38,066)
query : 1 - 4,020 (4,020/4,020)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221931)
HIX0221931
HIT000207770 (
NM_020168
)
(CRIB domain containing protein.)
genome : 40,531,998 - 40,569,688 (37,691)
query : 1 - 3,938 (3,938/3,950)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221931)
HIX0221931
HIT000245212_03
(
AJ236915
)
Representative transcript
(Serine/threonine-protein kinase PAK 6; EC=2.7.11.1; PAK-5; p21-activated kinase 6; PAK-6;)
genome : 40,532,071 - 40,569,687 (37,617)
query : 13 - 3,887 (3,875/3,908)
11 exons
identity = 0.996
5'(0.987;1.000;0.991;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.993)3'
coverage = 0.996
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000095 : CRIB domain
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221931)
HIX0221931
HIT000107716 (
ENST00000260404
)
(CRIB domain containing protein.)
genome : 40,532,071 - 40,569,688 (37,618)
query : 1 - 3,865 (3,865/3,865)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221931)
HIX0221931
HIT000672152 (
ENST00000558878
)
(CRIB domain containing protein.)
genome : 40,532,723 - 40,557,141 (24,419)
query : 1 - 553 (553/553)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 14.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221931)
HIX0221931
HIT000671470 (
ENST00000558183
)
(CRIB domain containing protein.)
genome : 40,532,784 - 40,557,190 (24,407)
query : 17 - 552 (536/552)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 14.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221931)
HIX0221931
HIT000075964
(
AF276893
)
(CRIB domain containing protein.)
genome : 40,532,801 - 40,568,719 (35,919)
query : 1 - 2,669 (2,669/2,669)
10 exons
identity = 0.999
5'(1.000;1.000;0.995;0.998;1.000;0.993;1.000;
1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR000095 : CRIB domain
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221931)
HIX0221931
HIT000674043 (
ENST00000560806
)
(Conserved hypothetical protein.)
genome : 40,532,846 - 40,557,028 (24,183)
query : 1 - 561 (561/561)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221931)
HIX0012123
HIT000022455
(
AK097601
)
Representative transcript
(Hypothetical protein.)
genome : 40,537,126 - 40,539,567 (2,442)
query : 1 - 2,442 (2,442/2,442)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 14.3333, cyto 4.5,
cyto_pero 4.33333, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012123)
HIX0012124
HIT000260252
(
BC061900
)
(Conserved hypothetical protein.)
genome : 40,542,867 - 40,543,477 (611)
query : 1 - 611 (611/789)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto 7, cyto_nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012124)
HIX0012124
HIT000366596 (
NM_001039905
)
(Conserved hypothetical protein.)
genome : 40,542,867 - 40,545,110 (2,244)
query : 1 - 2,126 (2,126/2,135)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 10.6667, extr 7, mito 6.5,
cyto_mito 6.33333, cyto 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012124)
HIX0012124
HIT000122085 (
ENST00000319503
)
(Conserved hypothetical protein.)
genome : 40,542,865 - 40,545,111 (2,247)
query : 1 - 2,129 (2,129/2,129)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 10.6667, extr 7, mito 6.5,
cyto_mito 6.33333, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012124)
HIX0012124
HIT000020770
(
AK095915
)
Representative transcript
(Conserved hypothetical protein.)
genome : 40,542,868 - 40,545,110 (2,243)
query : 1 - 2,125 (2,125/2,125)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 10.6667, extr 7, mito 6.5,
cyto_mito 6.33333, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012124)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : ENSPTRT00000012747
HIX0012124
HIT000503557
(
BC171826
)
(Conserved hypothetical protein.)
genome : 40,543,977 - 40,545,170 (1,194)
query : 1 - 1,194 (1,194/1,194)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 13, cyto 7.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012124)
HIX0012124
HIT000672982 (
ENST00000559727
)
(Conserved hypothetical protein.)
genome : 40,543,977 - 40,545,170 (1,194)
query : 1 - 1,194 (1,194/1,194)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 12.5, extr 8, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012124)
HIX0221931
HIT000671395 (
ENST00000558106
)
(CRIB domain containing protein.)
genome : 40,544,391 - 40,558,207 (13,817)
query : 1 - 560 (560/560)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221931)
HIX0221931
HIT000672877 (
ENST00000559617
)
(CRIB domain containing protein.)
genome : 40,544,749 - 40,558,175 (13,427)
query : 1 - 598 (598/598)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221931)
HIX0221931
HIT000673923 (
ENST00000560684
)
(CRIB domain containing protein.)
genome : 40,544,752 - 40,557,181 (12,430)
query : 1 - 569 (569/569)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 14.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221931)
HIX0221931
HIT000672409 (
ENST00000559139
)
(CRIB domain containing protein.)
genome : 40,545,089 - 40,558,165 (13,077)
query : 1 - 571 (571/571)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221931)
HIX0221931
HIT000673908 (
ENST00000560669
)
(CRIB domain containing protein.)
genome : 40,545,204 - 40,558,692 (13,489)
query : 1 - 1,146 (1,146/1,146)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221931)
HIX0221931
HIT000725341 (
NM_001276717
)
(CRIB domain containing protein.)
genome : 40,545,379 - 40,569,688 (24,310)
query : 1 - 2,546 (2,546/2,558)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221931)
HIX0221931
HIT000051432
(
BC035596
)
(CRIB domain containing protein.)
genome : 40,545,385 - 40,569,688 (24,304)
query : 1 - 2,540 (2,540/2,600)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000095 : CRIB domain
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221931)
HIX0221931
HIT000641448 (
ENST00000542403
)
(CRIB domain containing protein.)
genome : 40,545,385 - 40,569,688 (24,304)
query : 1 - 2,540 (2,540/2,540)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221931)
HIX0026881
HIT000048979
(
AK129708
)
Representative transcript
(Conserved hypothetical protein.)
genome : 40,550,702 - 40,552,571 (1,870)
query : 1 - 1,872 (1,872/1,873)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 9.5, nucl 9, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026881)
HIX0221931
HIT000673155 (
ENST00000559901
)
(Conserved hypothetical protein.)
genome : 40,558,215 - 40,559,183 (969)
query : 1 - 542 (542/542)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 16.5, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221931)
HIX0221931
HIT000671216 (
ENST00000557926
)
(Conserved hypothetical protein.)
genome : 40,558,813 - 40,564,555 (5,743)
query : 1 - 517 (517/517)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221931)
HIX0221931
HIT000671100 (
ENST00000557808
)
(Conserved hypothetical protein.)
genome : 40,566,131 - 40,568,585 (2,455)
query : 1 - 805 (805/805)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 16, nucl 5.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221931)
HIX0221931
HIT000009866
(
AK026592
)
(Hypothetical short protein.)
genome : 40,569,269 - 40,569,688 (420)
query : 1 - 420 (420/519)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, extr 10, nucl 6.5, E.R._mito 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221931)
HIX0012125
HIT000673260 (
ENST00000560009
)
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2.)
genome : 40,570,377 - 40,581,773 (11,397)
query : 1 - 563 (563/563)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_mito 7, cyto 5.5, mito 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012125)
HIX0193802
HIT000532330 (
ENST00000434396
)
(Ankyrin repeat-containing domain containing protein.)
genome : 40,573,645 - 40,574,787 (1,143)
query : 1 - 1,143 (1,143/1,143)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 13, cyto 13, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0193802)
HIX0193802
HIT000655640 (
NM_001190479
)
(Ankyrin repeat-containing domain containing protein.)
genome : 40,573,645 - 40,574,787 (1,143)
query : 1 - 1,143 (1,143/1,143)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 13, cyto 13, extr 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0193802)
HIX0193802
pHIT000024933 ( pHIT000024933 )
(Conserved hypothetical protein.)
genome : 40,573,645 - 40,574,787 (1,143)
query : 1 - 1,143 (1,143/1,143)
1 exon
InterPro :
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0193802)
CAGE tag :
H09BA75I0103
HIX0193802
pHIT000114133 ( pHIT000114133 )
Representative transcript
(Conserved hypothetical protein.)
genome : 40,573,645 - 40,574,787 (1,143)
query : 1 - 975 (975/975)
2 exons
InterPro :
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0193802)
CAGE tag :
T15R024A3FE7
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK135101
Danio
sp. (Zebrafish) : XM_001919668
Canis
sp. (Dog) : XM_845391
HIX0193802
pHIT000088015 ( pHIT000088015 )
(Conserved hypothetical protein.)
genome : 40,573,645 - 40,574,019 (375)
query : 1 - 375 (375/375)
1 exon
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0193802)
CAGE tag :
H09BA75I0103
HIX0012125
HIT000672929 (
ENST00000559671
)
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2.)
genome : 40,576,457 - 40,582,873 (6,417)
query : 1 - 517 (517/517)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012125)
HIX0012125
HIT000201317 (
NM_004573
)
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2; EC=3.1.4.11; Phosphoinositide phospholipase C-beta-2; Phospholipase C-beta-2; PLC-beta-2;)
genome : 40,580,099 - 40,600,174 (20,076)
query : 1 - 4,676 (4,676/4,694)
32 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 13.5, cyto 11, pero 3, cysk 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012125)
HIX0012125
HIT000050102
(
AK130831
)
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2.)
genome : 40,580,100 - 40,590,137 (10,038)
query : 1 - 1,484 (1,484/1,484)
10 exons
identity = 0.988
3'(1.000;0.985;1.000;1.000;1.000;1.000;0.986;
0.946;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
InterPro :
IPR000909 : Phospholipase C, phosphatidylinositol-specific , X domain
IPR001192 : Phosphoinositide phospholipase C family
IPR014815 : PLC-beta, C-terminal
IPR017946 : PLC-like phosphodiesterase, TIM beta/alpha-barrel domain
IPR028403 : 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2
GO :
0004435 : Molecular Function : phosphatidylinositol phospholipase C activity
0004629 : Molecular Function : phospholipase C activity
0005509 : Molecular Function : calcium ion binding
0006629 : Biological Process : lipid metabolic process
0008081 : Molecular Function : phosphoric diester hydrolase activity
0016042 : Biological Process : lipid catabolic process
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 11.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012125)
HIX0012125
HIT000196902
(
M95678
)
Representative transcript
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2 family protein.)
genome : 40,580,110 - 40,600,038 (19,929)
query : 1 - 4,516 (4,516/4,519)
32 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.993;1.000;0.988;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.996)5'
coverage = 0.999
InterPro :
IPR000008 : C2 domain
IPR000909 : Phospholipase C, phosphatidylinositol-specific , X domain
IPR001192 : Phosphoinositide phospholipase C family
IPR001711 : Phospholipase C, phosphatidylinositol-specific, Y domain
IPR011992 : EF-hand domain pair
IPR014815 : PLC-beta, C-terminal
IPR015359 : Phospholipase C, phosphoinositol-specific, EF-hand-like
IPR017946 : PLC-like phosphodiesterase, TIM beta/alpha-barrel domain
IPR028403 : 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2
GO :
0004435 : Molecular Function : phosphatidylinositol phospholipase C activity
0004629 : Molecular Function : phospholipase C activity
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0006629 : Biological Process : lipid metabolic process
0007165 : Biological Process : signal transduction
0008081 : Molecular Function : phosphoric diester hydrolase activity
0016042 : Biological Process : lipid catabolic process
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 13.5, cyto 10, pero 3, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012125)
Ortholog candidate ( ->
Evola
)
Oryzias
sp. (Medaka) : AB254242
Rattus
sp. (Rat) : AJ011035
Mus
sp. (Mouse) : AK045469
Gallus
sp. (Chicken) : ENSGALT00000007647
Macaca
sp. (Macaque) : ENSMMUT00000028901
Monodelphis
sp. (Opossum) : ENSMODT00000000650
Takifugu
sp. (Fugu) : SINFRUT00000170513
Pan
sp. (Chimpanzee) : XM_001140885
Equus
sp. (Horse) : XM_001918300
Canis
sp. (Dog) : XM_544615
Bos
sp. (Cow) : XR_028231
Danio
sp. (Zebrafish) : XR_030066
HIX0012125
HIT000107714 (
ENST00000260402
)
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2; EC=3.1.4.11; Phosphoinositide phospholipase C-beta-2; Phospholipase C-beta-2; PLC-beta-2;)
genome : 40,580,108 - 40,600,123 (20,016)
query : 1 - 4,616 (4,616/4,616)
32 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 13.5, cyto 11, pero 3, cysk 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012125)
HIX0012125
HIT000672646 (
ENST00000559381
)
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2.)
genome : 40,580,109 - 40,583,530 (3,422)
query : 1 - 1,641 (1,641/1,641)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 7, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012125)
HIX0012125
HIT000671113 (
ENST00000557821
)
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2; EC=3.1.4.11; Phosphoinositide phospholipase C-beta-2; Phospholipase C-beta-2; PLC-beta-2;)
genome : 40,580,110 - 40,600,038 (19,929)
query : 1 - 4,517 (4,517/4,517)
32 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 13.5, cyto 10, pero 3, cysk 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012125)
HIX0012125
HIT000329518
(
AB209583
)
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2; EC=3.1.4.11; Phosphoinositide phospholipase C-beta-2; Phospholipase C-beta-2; PLC-beta-2;)
genome : 40,580,110 - 40,599,894 (19,785)
query : 1 - 4,643 (4,643/4,643)
29 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;0.997;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
InterPro :
IPR000008 : C2 domain
IPR000909 : Phospholipase C, phosphatidylinositol-specific , X domain
IPR001192 : Phosphoinositide phospholipase C family
IPR001711 : Phospholipase C, phosphatidylinositol-specific, Y domain
IPR011992 : EF-hand domain pair
IPR015359 : Phospholipase C, phosphoinositol-specific, EF-hand-like
IPR017946 : PLC-like phosphodiesterase, TIM beta/alpha-barrel domain
IPR028403 : 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2
GO :
0004435 : Molecular Function : phosphatidylinositol phospholipase C activity
0004629 : Molecular Function : phospholipase C activity
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0006629 : Biological Process : lipid metabolic process
0007165 : Biological Process : signal transduction
0008081 : Molecular Function : phosphoric diester hydrolase activity
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 15, cyto 8.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012125)
HIX0012125
HIT000671865 (
ENST00000558588
)
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2; EC=3.1.4.11; Phosphoinositide phospholipase C-beta-2; Phospholipase C-beta-2; PLC-beta-2;)
genome : 40,580,110 - 40,599,894 (19,785)
query : 1 - 4,643 (4,643/4,643)
29 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 15, cyto 8.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012125)
HIX0012125
HIT000672878 (
ENST00000559618
)
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2.)
genome : 40,580,110 - 40,581,122 (1,013)
query : 19 - 438 (420/438)
2 exons
identity = 0.993
3'(1.000;0.991)5'
coverage = 0.959
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012125)
HIX0012125
HIT000500485
(
BC136467
)
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2; EC=3.1.4.11; Phosphoinositide phospholipase C-beta-2; Phospholipase C-beta-2; PLC-beta-2;)
genome : 40,580,340 - 40,600,026 (19,687)
query : 1 - 4,242 (4,242/4,242)
31 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.988;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
InterPro :
IPR000008 : C2 domain
IPR000909 : Phospholipase C, phosphatidylinositol-specific , X domain
IPR001192 : Phosphoinositide phospholipase C family
IPR001711 : Phospholipase C, phosphatidylinositol-specific, Y domain
IPR011992 : EF-hand domain pair
IPR014815 : PLC-beta, C-terminal
IPR015359 : Phospholipase C, phosphoinositol-specific, EF-hand-like
IPR017946 : PLC-like phosphodiesterase, TIM beta/alpha-barrel domain
IPR028403 : 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2
GO :
0004435 : Molecular Function : phosphatidylinositol phospholipase C activity
0004629 : Molecular Function : phospholipase C activity
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0006629 : Biological Process : lipid metabolic process
0007165 : Biological Process : signal transduction
0008081 : Molecular Function : phosphoric diester hydrolase activity
0016042 : Biological Process : lipid catabolic process
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 13.5, cyto 10, pero 3, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012125)
HIX0012125
HIT000554190 (
ENST00000456256
)
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2; EC=3.1.4.11; Phosphoinositide phospholipase C-beta-2; Phospholipase C-beta-2; PLC-beta-2;)
genome : 40,580,340 - 40,600,026 (19,687)
query : 1 - 4,242 (4,242/4,242)
31 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 13.5, cyto 10, pero 3, cysk 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012125)
HIX0012125
HIT000424454
(
AK291657
)
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2; EC=3.1.4.11; Phosphoinositide phospholipase C-beta-2; Phospholipase C-beta-2; PLC-beta-2;)
genome : 40,580,710 - 40,600,123 (19,414)
query : 1 - 4,014 (4,014/4,014)
32 exons
identity = 0.998
3'(1.000;0.989;1.000;0.990;1.000;1.000;1.000;
1.000;0.987;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.994;1.000;0.988;
1.000;1.000;1.000;1.000;0.987;1.000;1.000;
0.993;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
InterPro :
IPR000008 : C2 domain
IPR000909 : Phospholipase C, phosphatidylinositol-specific , X domain
IPR001192 : Phosphoinositide phospholipase C family
IPR001711 : Phospholipase C, phosphatidylinositol-specific, Y domain
IPR011992 : EF-hand domain pair
IPR014815 : PLC-beta, C-terminal
IPR015359 : Phospholipase C, phosphoinositol-specific, EF-hand-like
IPR017946 : PLC-like phosphodiesterase, TIM beta/alpha-barrel domain
IPR028403 : 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2
GO :
0004435 : Molecular Function : phosphatidylinositol phospholipase C activity
0004629 : Molecular Function : phospholipase C activity
0005509 : Molecular Function : calcium ion binding
0005515 : Molecular Function : protein binding
0006629 : Biological Process : lipid metabolic process
0007165 : Biological Process : signal transduction
0008081 : Molecular Function : phosphoric diester hydrolase activity
0016042 : Biological Process : lipid catabolic process
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 13.5, cyto 11, pero 3, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012125)
HIX0012125
HIT000671784 (
ENST00000558505
)
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2.)
genome : 40,580,773 - 40,583,531 (2,759)
query : 1 - 543 (543/543)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto 8.5, cyto_nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012125)
HIX0012125
HIT000673939 (
ENST00000560701
)
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2.)
genome : 40,581,267 - 40,583,554 (2,288)
query : 1 - 701 (701/701)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 9.5, E.R._mito 9.5, mito_pero 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012125)
HIX0012125
HIT000674604 (
ENST00000561378
)
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2.)
genome : 40,584,075 - 40,585,823 (1,749)
query : 1 - 553 (553/553)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 21, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012125)
HIX0012125
HIT000671688 (
ENST00000558409
)
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2.)
genome : 40,588,766 - 40,589,920 (1,155)
query : 1 - 432 (432/432)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, nucl 11, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012125)
HIX0012125
HIT000673343 (
ENST00000560093
)
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2.)
genome : 40,590,495 - 40,591,490 (996)
query : 1 - 563 (563/563)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 9.5, cyto_nucl 8.5, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012125)
HIX0012125
HIT000030018
(
BC000939
)
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2.)
genome : 40,592,870 - 40,599,989 (7,120)
query : 1 - 1,640 (1,640/1,658)
8 exons
identity = 0.998
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
InterPro :
IPR001192 : Phosphoinositide phospholipase C family
IPR028403 : 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2
GO :
0004629 : Molecular Function : phospholipase C activity
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto 10, extr 4, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012125)
HIX0012125
HIT000034136
(
BC009009
)
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2.)
genome : 40,592,868 - 40,600,111 (7,244)
query : 1 - 1,763 (1,763/1,777)
8 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
InterPro :
IPR001192 : Phosphoinositide phospholipase C family
IPR028403 : 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2
GO :
0004629 : Molecular Function : phospholipase C activity
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto 10, extr 4, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012125)
HIX0012125
HIT000642830 (
ENST00000543785
)
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2.)
genome : 40,592,868 - 40,600,111 (7,244)
query : 1 - 1,763 (1,763/1,763)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto 10, extr 4, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012125)
HIX0222518
HIT000672784 (
ENST00000559520
)
(Hypothetical short protein.)
genome : 40,592,871 - 40,594,021 (1,151)
query : 1 - 568 (568/568)
2 exons
identity = 0.996
5'(1.000;0.991)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222518)
HIX0012125
HIT000099825
(
BT006905
)
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2.)
genome : 40,594,158 - 40,599,873 (5,716)
query : 1 - 582 (582/600)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.970
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
InterPro :
IPR001192 : Phosphoinositide phospholipase C family
IPR028403 : 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2
GO :
0004629 : Molecular Function : phospholipase C activity
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto 10, extr 4, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012125)
HIX0012125
HIT000672894 (
ENST00000559634
)
(1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-2.)
genome : 40,596,088 - 40,600,136 (4,049)
query : 1 - 539 (539/539)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.4.11
KEGG pathway :
00562 : Inositol phosphate metabolism (39)
01100 : Metabolic pathways (1346)
04070 : Phosphatidylinositol signaling system (23)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, cyto 4.5, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012125)
HIX0222896
HIT000671893 (
ENST00000558616
)
(Fibrous sheath-interacting protein 1 family protein.)
genome : 40,062,760 - 40,093,534 (30,775)
query : 1 - 318 (318/318)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, cyto_nucl 9.5, extr 9, nucl 6, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222896)
HIX0222857
HIT000365322 (
NM_001013703
)
(Eukaryotic translation initiation factor 2-alpha kinase 4; EC=2.7.11.1; GCN2-like protein;)
genome : 40,226,347 - 40,327,797 (101,451)
query : 1 - 5,512 (5,512/5,532)
39 exons
identity = 1.000
5'(0.995;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 16.5, cyto 7.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222857)
HIX0222857
HIT000364005 (
ENST00000382727
)
(Eukaryotic translation initiation factor 2-alpha kinase 4; EC=2.7.11.1; GCN2-like protein;)
genome : 40,226,347 - 40,327,797 (101,451)
query : 1 - 5,428 (5,428/5,428)
38 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 17, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222857)
HIX0222857
HIT000109040 (
ENST00000263791
)
(Eukaryotic translation initiation factor 2-alpha kinase 4; EC=2.7.11.1; GCN2-like protein;)
genome : 40,226,354 - 40,327,791 (101,438)
query : 1 - 5,499 (5,499/5,499)
39 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 16.5, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222857)
HIX0222857
HIT000001053
(
AB037759
)
Representative transcript
(Eukaryotic translation initiation factor 2-alpha kinase 4.)
genome : 40,246,115 - 40,327,791 (81,677)
query : 62 - 4,994 (4,933/4,994)
35 exons
identity = 0.999
5'(0.986;1.000;1.000;1.000;1.000;1.000;0.994;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.996;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.992;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 0.988
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, E.R. 8, pero 5, plas 4, mito_pero 4,
E.R._golg 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222857)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AJ243533
Bos
sp. (Cow) : ENSBTAT00000045990
Canis
sp. (Dog) : ENSCAFT00000014032
Oryzias
sp. (Medaka) : ENSORLT00000021186
Pongo
sp. (Orangutan) : ENSPPYT00000007480
Takifugu
sp. (Fugu) : SINFRUT00000130136
Rattus
sp. (Rat) : XM_001074965
Pan
sp. (Chimpanzee) : XM_001140245
Monodelphis
sp. (Opossum) : XM_001380935
Equus
sp. (Horse) : XM_001501267
Danio
sp. (Zebrafish) : XR_044737
HIX0222857
HIT000027819
(
AL832907
)
(Eukaryotic translation initiation factor 2-alpha kinase 4.)
genome : 40,247,819 - 40,327,792 (79,974)
query : 9 - 4,789 (4,781/4,816)
33 exons
identity = 0.999
5'(1.000;1.000;1.000;0.998;1.000;0.994;0.998;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.998
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR004154 : Anticodon-binding
IPR008271 : Serine/threonine-protein kinase, active site
IPR024435 : Histidyl tRNA synthetase-related domain
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 16.5, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222857)
HIX0222857
HIT000674092 (
ENST00000560855
)
(Eukaryotic translation initiation factor 2-alpha kinase 4.)
genome : 40,247,819 - 40,327,792 (79,974)
query : 9 - 4,789 (4,781/4,789)
33 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.998
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto_nucl 16.5, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222857)
HIX0222857
HIT000088504
(
BC014915
)
(Eukaryotic translation initiation factor 2-alpha kinase 4.)
genome : 40,265,117 - 40,327,515 (62,399)
query : 1 - 3,619 (3,619/3,633)
30 exons
identity = 0.999
5'(1.000;0.994;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.992;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR004154 : Anticodon-binding
IPR008271 : Serine/threonine-protein kinase, active site
IPR024435 : Histidyl tRNA synthetase-related domain
GO :
0004674 : Molecular Function : protein serine/threonine kinase activity
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 15.8333, nucl 11,
cyto_plas 9.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0222857)
HIX0012121
HIT000198207 (
NM_001211
)
(Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; EC=2.7.11.1; MAD3/BUB1-related protein kinase; hBUBR1; Mitotic checkpoint kinase MAD3L; Protein SSK1;)
genome : 40,453,210 - 40,513,337 (60,128)
query : 1 - 3,742 (3,742/3,749)
23 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.989;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 0.998
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15, cyto 9.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012121)
HIX0012121
HIT000112867 (
ENST00000287598
)
(Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; EC=2.7.11.1; MAD3/BUB1-related protein kinase; hBUBR1; Mitotic checkpoint kinase MAD3L; Protein SSK1;)
genome : 40,453,227 - 40,513,337 (60,111)
query : 1 - 3,725 (3,725/3,725)
23 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012121)
HIX0012121
HIT000064519
(
AF053306
)
(Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; EC=2.7.11.1; MAD3/BUB1-related protein kinase; hBUBR1; Mitotic checkpoint kinase MAD3L; Protein SSK1;)
genome : 40,453,238 - 40,513,322 (60,085)
query : 1 - 3,699 (3,699/3,725)
23 exons
identity = 0.998
5'(0.991;1.000;1.000;1.000;1.000;1.000;1.000;
0.989;0.996;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.980;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR013212 : Mad3/BUB1 homology region 1
IPR015661 : Mitotic checkpoint serine/threonine protein kinase Bub1/Mitotic spindle checkpoint component Mad3
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012121)
HIX0012121
HIT000431575
(
AK312709
)
(Mitotic checkpoint serine/threonine protein kinase Bub1/Mitotic spindle checkpoint component Mad3 family protein.)
genome : 40,453,244 - 40,512,960 (59,717)
query : 2 - 3,333 (3,332/3,333)
23 exons
identity = 0.999
5'(0.991;1.000;1.000;1.000;1.000;1.000;0.995;
0.989;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
InterPro :
IPR013212 : Mad3/BUB1 homology region 1
IPR015661 : Mitotic checkpoint serine/threonine protein kinase Bub1/Mitotic spindle checkpoint component Mad3
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012121)
HIX0012121
HIT000491419
(
AK296795
)
(Mitotic checkpoint serine/threonine-protein kinase BUB1 beta.)
genome : 40,453,244 - 40,513,321 (60,078)
query : 1 - 3,341 (3,341/3,341)
23 exons
identity = 0.996
5'(0.995;1.000;1.000;0.945;0.986;1.000;1.000;
0.989;0.996;1.000;1.000;1.000;1.000;1.000;
0.978;0.983;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR013212 : Mad3/BUB1 homology region 1
IPR015661 : Mitotic checkpoint serine/threonine protein kinase Bub1/Mitotic spindle checkpoint component Mad3
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012121)
HIX0012121
HIT000491608
(
AK296984
)
(Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; EC=2.7.11.1; MAD3/BUB1-related protein kinase; hBUBR1; Mitotic checkpoint kinase MAD3L; Protein SSK1;)
genome : 40,453,268 - 40,513,239 (59,972)
query : 1 - 3,628 (3,628/3,628)
23 exons
identity = 0.998
5'(0.995;1.000;0.981;0.972;1.000;1.000;1.000;
0.989;0.996;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR013212 : Mad3/BUB1 homology region 1
IPR015661 : Mitotic checkpoint serine/threonine protein kinase Bub1/Mitotic spindle checkpoint component Mad3
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012121)
HIX0012121
HIT000510293 (
ENST00000412359
)
(Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; EC=2.7.11.1; MAD3/BUB1-related protein kinase; hBUBR1; Mitotic checkpoint kinase MAD3L; Protein SSK1;)
genome : 40,453,268 - 40,513,239 (59,972)
query : 1 - 3,628 (3,628/3,628)
23 exons
identity = 0.998
5'(1.000;1.000;0.981;0.972;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012121)
HIX0012121
HIT000069546
(
AF107297
)
(Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; EC=2.7.11.1; MAD3/BUB1-related protein kinase; hBUBR1; Mitotic checkpoint kinase MAD3L; Protein SSK1;)
genome : 40,453,285 - 40,513,322 (60,038)
query : 1 - 3,652 (3,652/3,670)
23 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR013212 : Mad3/BUB1 homology region 1
IPR015661 : Mitotic checkpoint serine/threonine protein kinase Bub1/Mitotic spindle checkpoint component Mad3
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012121)
HIX0012121
HIT000038433
(
BC018739
)
(Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; EC=2.7.11.1; MAD3/BUB1-related protein kinase; hBUBR1; Mitotic checkpoint kinase MAD3L; Protein SSK1;)
genome : 40,453,288 - 40,513,322 (60,035)
query : 1 - 3,649 (3,649/3,702)
23 exons
identity = 0.999
5'(0.994;1.000;1.000;1.000;1.000;1.000;1.000;
0.989;0.996;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR013212 : Mad3/BUB1 homology region 1
IPR015661 : Mitotic checkpoint serine/threonine protein kinase Bub1/Mitotic spindle checkpoint component Mad3
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012121)
HIX0012121
HIT000064018
(
AF046918
)
(Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; EC=2.7.11.1; MAD3/BUB1-related protein kinase; hBUBR1; Mitotic checkpoint kinase MAD3L; Protein SSK1;)
genome : 40,453,292 - 40,513,322 (60,031)
query : 1 - 3,644 (3,644/3,664)
23 exons
identity = 0.995
5'(0.982;1.000;1.000;1.000;1.000;1.000;1.000;
0.989;0.996;1.000;1.000;1.000;0.984;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.979)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR013212 : Mad3/BUB1 homology region 1
IPR015661 : Mitotic checkpoint serine/threonine protein kinase Bub1/Mitotic spindle checkpoint component Mad3
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012121)
HIX0012121
HIT000328717
(
AB208782
)
Representative transcript
(Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; EC=2.7.11.1; MAD3/BUB1-related protein kinase; hBUBR1; Mitotic checkpoint kinase MAD3L; Protein SSK1;)
genome : 40,453,297 - 40,513,378 (60,082)
query : 1 - 3,696 (3,696/3,696)
23 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR013212 : Mad3/BUB1 homology region 1
IPR015661 : Mitotic checkpoint serine/threonine protein kinase Bub1/Mitotic spindle checkpoint component Mad3
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012121)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB169406
Mus
sp. (Mouse) : AF107296
Gallus
sp. (Chicken) : AY245433
Bos
sp. (Cow) : BC151758
Canis
sp. (Dog) : ENSCAFT00000014186
Equus
sp. (Horse) : ENSECAT00000023340
Pongo
sp. (Orangutan) : ENSPPYT00000007484
Rattus
sp. (Rat) : U83666
Monodelphis
sp. (Opossum) : XM_001380976
Pan
sp. (Chimpanzee) : XM_510299
Danio
sp. (Zebrafish) : XM_691245
HIX0012121
HIT000063315
(
AF035933
)
(Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; EC=2.7.11.1; MAD3/BUB1-related protein kinase; hBUBR1; Mitotic checkpoint kinase MAD3L; Protein SSK1;)
genome : 40,453,301 - 40,513,322 (60,022)
query : 1 - 3,637 (3,637/3,654)
23 exons
identity = 0.998
5'(0.987;1.000;1.000;0.993;1.000;0.982;1.000;
0.989;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.993;1.000;1.000;1.000;1.000;
1.000;0.998)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR013212 : Mad3/BUB1 homology region 1
IPR015661 : Mitotic checkpoint serine/threonine protein kinase Bub1/Mitotic spindle checkpoint component Mad3
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012121)
HIX0012121
HIT000065622
(
AF068760
)
(Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; EC=2.7.11.1; MAD3/BUB1-related protein kinase; hBUBR1; Mitotic checkpoint kinase MAD3L; Protein SSK1;)
genome : 40,453,316 - 40,513,322 (60,007)
query : 1 - 3,621 (3,621/3,649)
23 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.989;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR013212 : Mad3/BUB1 homology region 1
IPR015661 : Mitotic checkpoint serine/threonine protein kinase Bub1/Mitotic spindle checkpoint component Mad3
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012121)
HIX0012121
HIT000064012
(
AF046079
)
(Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; EC=2.7.11.1; MAD3/BUB1-related protein kinase; hBUBR1; Mitotic checkpoint kinase MAD3L; Protein SSK1;)
genome : 40,453,380 - 40,513,322 (59,943)
query : 1 - 3,557 (3,557/3,583)
23 exons
identity = 0.999
5'(1.000;1.000;1.000;0.993;1.000;1.000;1.000;
0.989;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR013212 : Mad3/BUB1 homology region 1
IPR015661 : Mitotic checkpoint serine/threonine protein kinase Bub1/Mitotic spindle checkpoint component Mad3
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15, cyto 9.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012121)
HIX0012121
HIT000559484 (
NM_001128628
)
(Serine/threonine-protein kinase PAK 6; EC=2.7.11.1; PAK-5; p21-activated kinase 6; PAK-6;)
genome : 40,509,629 - 40,569,688 (60,060)
query : 1 - 3,879 (3,879/3,891)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012121)
HIX0012121
HIT000559485 (
NM_001128629
)
(Serine/threonine-protein kinase PAK 6; EC=2.7.11.1; PAK-5; p21-activated kinase 6; PAK-6;)
genome : 40,509,629 - 40,569,688 (60,060)
query : 1 - 3,796 (3,796/3,808)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012121)
HIX0012121
HIT000539303 (
ENST00000441369
)
(Serine/threonine-protein kinase PAK 6; EC=2.7.11.1; PAK-5; p21-activated kinase 6; PAK-6;)
genome : 40,509,629 - 40,569,687 (60,059)
query : 1 - 3,878 (3,878/3,878)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012121)
HIX0012121
HIT000551801 (
ENST00000453867
)
(Serine/threonine-protein kinase PAK 6; EC=2.7.11.1; PAK-5; p21-activated kinase 6; PAK-6;)
genome : 40,509,629 - 40,569,687 (60,059)
query : 1 - 3,795 (3,795/3,795)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012121)
HIX0012121
HIT000434683
(
AK315817
)
(Serine/threonine-protein kinase PAK 6; EC=2.7.11.1; PAK-5; p21-activated kinase 6; PAK-6;)
genome : 40,509,629 - 40,568,382 (58,754)
query : 1 - 2,490 (2,490/2,490)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;0.998;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000095 : CRIB domain
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012121)
HIX0012121
HIT000672237 (
ENST00000558965
)
(Serine/threonine-protein kinase PAK 6; EC=2.7.11.1; PAK-5; p21-activated kinase 6; PAK-6;)
genome : 40,509,629 - 40,568,382 (58,754)
query : 1 - 2,490 (2,490/2,490)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012121)
HIX0012121
HIT000434679
(
AK315813
)
(Serine/threonine-protein kinase PAK 6; EC=2.7.11.1; PAK-5; p21-activated kinase 6; PAK-6;)
genome : 40,509,650 - 40,568,597 (58,948)
query : 2 - 2,768 (2,767/2,768)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.998;1.000;1.000;
0.992;1.000;1.000;0.998)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000095 : CRIB domain
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012121)
HIX0012121
HIT000673189 (
ENST00000559936
)
(Serine/threonine-protein kinase PAK 6; EC=2.7.11.1; PAK-5; p21-activated kinase 6; PAK-6;)
genome : 40,509,650 - 40,568,597 (58,948)
query : 1 - 2,767 (2,767/2,767)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012121)
HIX0012121
HIT000423024
(
AK290227
)
(Serine/threonine-protein kinase PAK 6; EC=2.7.11.1; PAK-5; p21-activated kinase 6; PAK-6;)
genome : 40,509,788 - 40,568,588 (58,801)
query : 1 - 2,620 (2,620/2,620)
11 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.998;1.000;1.000;
1.000;1.000;1.000;0.998)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
InterPro :
IPR000095 : CRIB domain
IPR002290 : Serine/threonine/dual specificity protein kinase, catalytic domain
GO :
0004672 : Molecular Function : protein kinase activity
0005524 : Molecular Function : ATP binding
0006468 : Biological Process : protein phosphorylation
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012121)
HIX0012121
HIT000671933 (
ENST00000558658
)
(Serine/threonine-protein kinase PAK 6; EC=2.7.11.1; PAK-5; p21-activated kinase 6; PAK-6;)
genome : 40,509,788 - 40,568,588 (58,801)
query : 1 - 2,620 (2,620/2,620)
11 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012121)
HIX0012121
HIT000672700 (
ENST00000559435
)
(Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; EC=2.7.11.1; MAD3/BUB1-related protein kinase; hBUBR1; Mitotic checkpoint kinase MAD3L; Protein SSK1;)
genome : 40,510,701 - 40,557,091 (46,391)
query : 1 - 608 (608/608)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.11.1
KEGG pathway :
04150 : mTOR signaling pathway (5)
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 16, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012121)
HIX0193802
pHIT000024933 ( pHIT000024933 )
(Conserved hypothetical protein.)
genome : 40,573,645 - 40,574,787 (1,143)
query : 1 - 1,143 (1,143/1,143)
1 exon
InterPro :
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0193802)
CAGE tag :
H05BD79B0607,H09BA41E0805,H09BA41K1609
H09BA54C0113,H09BA75I0103
HIX0193802
pHIT000114133 ( pHIT000114133 )
Representative transcript
(Conserved hypothetical protein.)
genome : 40,573,645 - 40,574,787 (1,143)
query : 1 - 975 (975/975)
2 exons
InterPro :
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0193802)
CAGE tag :
T15R024A3FE7
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK135101
Danio
sp. (Zebrafish) : XM_001919668
Canis
sp. (Dog) : XM_845391
HIX0193802
pHIT000088015 ( pHIT000088015 )
(Conserved hypothetical protein.)
genome : 40,573,645 - 40,574,019 (375)
query : 1 - 375 (375/375)
1 exon
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0193802)
CAGE tag :
H05BD79B0607,H09BA41E0805,H09BA41K1609
H09BA54C0113,H09BA75I0103
HIX0012119
eHIT000005771 ( ESTsASS_15_874 )
(Non-protein coding transcript.)
genome : 40,226,356 - 40,327,796 (101,441)
query : 1 - 5,476 (5,476/5,476)
39 exons
ESTs assembly
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0012119)
ESTs used for assembly :
DB004156,DW449516,CR995205,DA991204
CB125780,BX369760,BM452097,AA306702
BM449754,DA243002,BF689834,BF692597
BM766136,BG257612,CX783573,FN051400
BM978043,BQ950911,BM674337,BQ941696
CN422382,BG259652,BU945041,BQ951986
BU619345,BI869062,BQ428507,BU902109
CN373499,BE390225,BG751050,DB281766
DA349761,DA927267,AA376437,R19609
BF856695,BM845206,BQ641337,BG035829
BX388401,BX419551,AA926944,DA191236
BE009278
AC104261.4
39000001-39002743 F -
NCBI
AC022929.6
39002744-39163316 F +
NCBI
AC084773.5
39163317-39268714 F +
NCBI
AC087878.7
39268715-39401541 F -
NCBI
AC113146.2
39401542-39526777 F +
NCBI
AC013652.8
39526778-39663038 F -
NCBI
AC109630.2
39663039-39778262 F +
NCBI
AC022196.7
39778263-39828855 F -
NCBI
AC037198.7
39828856-40012551 F +
NCBI
AC023908.6
40012552-40147569 F +
NCBI
AC012377.5
40147570-40250847 F +
NCBI
AC025168.7
40250848-40332504 F +
NCBI
AC021755.9
40332505-40436293 F +
NCBI
AC025429.6
40436294-40516359 F +
NCBI
AC020658.6
40516360-40600000 F +
NCBI