bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0221230
HIT000668594 (
ENST00000555246
)
(Hypothetical short protein.)
genome : 46,410,146 - 46,916,578 (506,433)
query : 1 - 408 (408/408)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 9, nucl 7.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221230)
HIX0221230
HIT000727836 (
NR_102701
)
(Conserved hypothetical protein.)
genome : 46,533,362 - 46,971,106 (437,745)
query : 1 - 946 (946/946)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 11.5, extr 11
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221230)
HIX0221230
HIT000727837 (
NR_102702
)
(Conserved hypothetical protein.)
genome : 46,533,362 - 46,971,106 (437,745)
query : 1 - 829 (829/829)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 9, mito 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221230)
HIX0221230
HIT000670194 (
ENST00000556886
)
(Hypothetical short protein.)
genome : 46,533,362 - 46,971,026 (437,665)
query : 1 - 866 (866/866)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 11.5, extr 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221230)
HIX0221230
HIT000727834 (
NR_102699
)
(Hypothetical short protein.)
genome : 46,940,562 - 46,971,106 (30,545)
query : 1 - 846 (846/846)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 8.5, cyto_nucl 7.5, cyto 5.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221230)
HIX0221230
HIT000727835 (
NR_102700
)
(Hypothetical short protein.)
genome : 46,940,562 - 46,971,106 (30,545)
query : 1 - 750 (750/750)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, mito 4, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221230)
HIX0221230
HIT000669403 (
ENST00000556071
)
(Hypothetical short protein.)
genome : 46,940,562 - 46,970,814 (30,253)
query : 1 - 554 (554/554)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 8.5, cyto_nucl 7.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221230)
HIX0221230
HIT000670177 (
ENST00000556869
)
(Hypothetical short protein.)
genome : 46,940,564 - 46,970,814 (30,251)
query : 1 - 456 (456/456)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, mito 4, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221230)
HIX0011625
HIT000036632
(
BC014310
)
Representative transcript
(60S ribosomal protein L10-like;)
genome : 47,120,222 - 47,121,024 (803)
query : 5 - 807 (803/838)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.993
InterPro :
IPR001197 : Ribosomal protein L10e
IPR016180 : Ribosomal protein L10e/L16
IPR018255 : Ribosomal protein L10e, conserved site
GO :
0003735 : Molecular Function : structural constituent of ribosome
0005622 : Cellular Component : intracellular
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 13, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011625)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB178981
Mus
sp. (Mouse) : BC052145
Pongo
sp. (Orangutan) : ENSPPYT00000006832
Equus
sp. (Horse) : XM_001495230
Rattus
sp. (Rat) : XM_234245
Pan
sp. (Chimpanzee) : XM_522844
Canis
sp. (Dog) : XM_547794
HIX0011625
HIT000211916 (
NM_080746
)
(60S ribosomal protein L10-like;)
genome : 47,120,221 - 47,121,028 (808)
query : 1 - 808 (808/838)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 13, extr 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011625)
HIX0011625
HIT000262203
(
BC066312
)
(60S ribosomal protein L10-like;)
genome : 47,120,214 - 47,120,982 (769)
query : 3 - 771 (769/786)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.997
InterPro :
IPR001197 : Ribosomal protein L10e
IPR016180 : Ribosomal protein L10e/L16
IPR018255 : Ribosomal protein L10e, conserved site
GO :
0003735 : Molecular Function : structural constituent of ribosome
0005622 : Cellular Component : intracellular
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 13, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011625)
HIX0011625
HIT000115032 (
ENST00000298283
)
(60S ribosomal protein L10-like;)
genome : 47,120,222 - 47,121,028 (807)
query : 1 - 807 (807/807)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 13, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011625)
HIX0011625
HIT000050134
(
AK130863
)
(60S ribosomal protein L10-like;)
genome : 47,120,222 - 47,120,988 (767)
query : 1 - 767 (767/767)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR001197 : Ribosomal protein L10e
IPR016180 : Ribosomal protein L10e/L16
IPR018255 : Ribosomal protein L10e, conserved site
GO :
0003735 : Molecular Function : structural constituent of ribosome
0005622 : Cellular Component : intracellular
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 13, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011625)
HIX0011625
HIT000059953
(
AB063608
)
(60S ribosomal protein L10-like;)
genome : 47,120,222 - 47,120,977 (756)
query : 1 - 756 (756/756)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR001197 : Ribosomal protein L10e
IPR016180 : Ribosomal protein L10e/L16
IPR018255 : Ribosomal protein L10e, conserved site
GO :
0003735 : Molecular Function : structural constituent of ribosome
0005622 : Cellular Component : intracellular
0005840 : Cellular Component : ribosome
0006412 : Biological Process : translation
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 13, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011625)
HIX0220990
HIT000054849
(
BX538065
)
(Conserved hypothetical protein.)
genome : 47,309,295 - 47,311,080 (1,786)
query : 1 - 1,787 (1,787/1,809)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 27, cyto 2, golg 2, cyto_golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220990)
HIX0220990
HIT000043180
(
AK123307
)
Representative transcript
(MAM domain containing protein.)
genome : 47,309,504 - 47,351,391 (41,888)
query : 1 - 2,415 (2,415/2,415)
6 exons
identity = 0.998
3'(0.998;0.991;1.000;1.000;1.000;0.993)5'
coverage = 1.000
InterPro :
IPR000998 : MAM domain
GO :
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 16, cyto 9, mito_pero 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220990)
HIX0220990
HIT000482321 (
ENST00000399222
)
(MAM domain containing protein.)
genome : 47,309,504 - 47,351,391 (41,888)
query : 1 - 2,416 (2,416/2,416)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 16, cyto 9, mito_pero 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220990)
HIX0220990
HIT000670812 (
ENST00000557516
)
(MAM domain containing protein.)
genome : 47,342,537 - 47,351,425 (8,889)
query : 1 - 593 (593/593)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.1667, cyto 16, cyto_plas 10.3333, extr 6,
nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220990)
HIX0220990
HIT000668862 (
ENST00000555521
)
(MAM domain containing protein.)
genome : 47,343,122 - 47,389,377 (46,256)
query : 1 - 644 (644/644)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 15, nucl 2.5, extr 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220990)
HIX0211377
HIT000615329 (
ENST00000515926
)
(Hypothetical short protein.)
genome : 47,429,626 - 47,429,749 (124)
query : 1 - 124 (124/124)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211377)
HIX0221702
HIT000669875 (
ENST00000556557
)
(Conserved hypothetical protein.)
genome : 47,465,657 - 47,466,377 (721)
query : 1 - 721 (721/721)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221702)
HIX0221022
HIT000668117 (
ENST00000554762
)
(Immunoglobulin I-set domain containing protein.)
genome : 47,504,392 - 47,601,041 (96,650)
query : 1 - 757 (757/757)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 12.5, mito 5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221022)
HIX0221022
HIT000091536
(
BC028193
)
Representative transcript
(Immunoglobulin I-set domain containing protein.)
genome : 47,527,821 - 47,812,395 (284,575)
query : 1 - 1,900 (1,900/1,946)
9 exons
identity = 0.998
3'(0.997;0.989;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR003598 : Immunoglobulin subtype 2
IPR013098 : Immunoglobulin I-set
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16.5, extr 10, mito_pero 9.5, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221022)
HIX0221022
HIT000586760 (
ENST00000482848
)
(Immunoglobulin I-set domain containing protein.)
genome : 47,527,803 - 47,812,395 (284,593)
query : 1 - 1,918 (1,918/1,918)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14.5, extr 10, mito_pero 8.5, cyto 5,
extr_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221022)
HIX0211346
HIT000591936 (
ENST00000488281
)
(Conserved hypothetical protein.)
genome : 47,669,778 - 47,670,307 (530)
query : 1 - 530 (530/530)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211346)
HIX0211296
HIT000444657_10
(
DQ578126
)
Representative transcript
(Non-protein coding transcript.)
genome : 47,670,161 - 47,670,190 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211296)
HIX0221022
HIT000590677 (
ENST00000486952
)
(Immunoglobulin I-set domain containing protein.)
genome : 47,687,258 - 47,812,437 (125,180)
query : 1 - 574 (574/574)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 10.5, cyto_nucl 10, cyto_pero 7.66667,
nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221022)
HIX0221022
HIT000576870 (
ENST00000472499
)
(Conserved hypothetical protein.)
genome : 47,768,550 - 47,775,353 (6,804)
query : 13 - 511 (499/511)
4 exons
identity = 0.996
3'(1.000;1.000;1.000;0.973)5'
coverage = 0.977
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 7.5, cyto_nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0221022)
HIX0211370
HIT000601055 (
ENST00000497800
)
(Ribosomal protein S8 family protein.)
genome : 47,913,309 - 47,913,697 (389)
query : 1 - 389 (389/389)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 5.5, cyto_nucl 5.5, nucl 4.5,
E.R._mito 4, mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211370)
HIX0026644
HIT000485916 (
NM_001113498
)
(MAM domain-containing glycosylphosphatidylinositol anchor protein 2 isoform 1.)
genome : 47,308,826 - 48,144,157 (835,332)
query : 1 - 5,544 (5,544/5,544)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, mito 4, nucl 2, pero 2, E.R._mito 2,
cyto_mito 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026644)
HIX0026644
HIT000537922 (
ENST00000439988
)
(MAM domain-containing glycosylphosphatidylinositol anchor protein 2 isoform 2.)
genome : 47,308,826 - 48,143,792 (834,967)
query : 1 - 5,179 (5,179/5,179)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 16, E.R. 9, extr_plas 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026644)
HIX0026644
HIT000318821 (
NM_182830
)
(MAM domain-containing glycosylphosphatidylinositol anchor protein 2 isoform 2.)
genome : 47,308,826 - 47,812,438 (503,613)
query : 1 - 5,239 (5,239/5,239)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 18, extr_plas 5.5, plas 5, extr 4, mito 2.5,
cyto_mito 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026644)
HIX0026644
HIT000524276 (
ENST00000426342
)
(MAM domain-containing glycosylphosphatidylinositol anchor protein 2 isoform 2.)
genome : 47,308,826 - 47,812,438 (503,613)
query : 1 - 5,239 (5,239/5,239)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 18, extr_plas 5.5, plas 5, extr 4, mito 2.5,
cyto_mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026644)
HIX0026644
HIT000482329 (
ENST00000399232
)
(MAM domain-containing glycosylphosphatidylinositol anchor protein 2 isoform 1.)
genome : 47,309,295 - 48,144,157 (834,863)
query : 1 - 5,075 (5,075/5,075)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, mito 4, nucl 2, pero 2, E.R._mito 2,
cyto_mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026644)
HIX0026644
HIT000253288
(
AY369208
)
Representative transcript
(MAM domain-containing glycosylphosphatidylinositol anchor protein 2 isoform 2.)
genome : 47,310,518 - 48,143,953 (833,436)
query : 1 - 3,648 (3,648/3,648)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000998 : MAM domain
IPR003598 : Immunoglobulin subtype 2
IPR003961 : Fibronectin type III
IPR013098 : Immunoglobulin I-set
GO :
0005515 : Molecular Function : protein binding
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 16, E.R. 9, extr_plas 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026644)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB047834
Mus
sp. (Mouse) : AK137667
Rattus
sp. (Rat) : AY371924
Oryzias
sp. (Medaka) : ENSORLT00000018844
Pongo
sp. (Orangutan) : ENSPPYT00000006833
Tetraodon
sp. (Tetraodon) : GSTENT00020738001
Takifugu
sp. (Fugu) : SINFRUT00000136119
Pan
sp. (Chimpanzee) : XM_001151973
Monodelphis
sp. (Opossum) : XM_001364346
Equus
sp. (Horse) : XM_001495359
Gallus
sp. (Chicken) : XM_421454
Canis
sp. (Dog) : XM_537432
Bos
sp. (Cow) : XM_617674
Danio
sp. (Zebrafish) : XM_681397
HIX0026644
HIT000251824
(
AY328482
)
(MAM domain-containing glycosylphosphatidylinositol anchor protein 2 isoform 2.)
genome : 47,310,845 - 47,530,767 (219,923)
query : 1 - 2,158 (2,158/2,190)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000998 : MAM domain
IPR003598 : Immunoglobulin subtype 2
IPR003961 : Fibronectin type III
IPR013098 : Immunoglobulin I-set
GO :
0005515 : Molecular Function : protein binding
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 11, nucl 6.5, mito 4,
mito_pero 3.5, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026644)
HIX0026644
HIT000428077
(
AK309211
)
(MAM domain-containing glycosylphosphatidylinositol anchor protein 2 isoform 1.)
genome : 47,310,846 - 48,144,157 (833,312)
query : 4 - 3,527 (3,524/3,527)
17 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.990;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.999
InterPro :
IPR000998 : MAM domain
IPR003598 : Immunoglobulin subtype 2
IPR003961 : Fibronectin type III
IPR013098 : Immunoglobulin I-set
GO :
0005515 : Molecular Function : protein binding
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 26, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026644)
HIX0026644
HIT000252170
(
AY358125
)
(MAM domain-containing glycosylphosphatidylinositol anchor protein 2 isoform 2.)
genome : 47,310,988 - 47,770,755 (459,768)
query : 20 - 2,962 (2,943/2,962)
16 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.996;1.000;1.000;1.000;1.000;0.995;
1.000;0.986)5'
coverage = 0.994
InterPro :
IPR000998 : MAM domain
IPR003598 : Immunoglobulin subtype 2
IPR003961 : Fibronectin type III
IPR013098 : Immunoglobulin I-set
GO :
0005515 : Molecular Function : protein binding
0016020 : Cellular Component : membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 18, extr_plas 5.5, plas 5, extr 4, mito 2.5,
cyto_mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026644)
HIX0026644
HIT000311217 (
ENST00000357362
)
(MAM domain-containing glycosylphosphatidylinositol anchor protein 2 isoform 2.)
genome : 47,310,988 - 47,770,755 (459,768)
query : 20 - 2,965 (2,946/2,965)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.994
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 18, extr_plas 5.5, plas 5, extr 4, mito 2.5,
cyto_mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026644)
HIX0026644
HIT000435441
(
BC142947
)
(MAM domain-containing glycosylphosphatidylinositol anchor protein 2; MAM domain-containing protein 1; Precursor; Fragment;)
genome : 47,340,144 - 48,095,728 (755,585)
query : 1 - 3,653 (3,653/3,668)
15 exons
identity = 0.998
3'(0.999;1.000;0.994;1.000;0.994;1.000;1.000;
0.996;1.000;1.000;1.000;1.000;0.994;1.000;
0.995)5'
coverage = 1.000
InterPro :
IPR000998 : MAM domain
IPR003598 : Immunoglobulin subtype 2
IPR003961 : Fibronectin type III
IPR013098 : Immunoglobulin I-set
GO :
0005515 : Molecular Function : protein binding
0016020 : Cellular Component : membrane
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 11, nucl 7.5, pero 4, mito 3,
cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026644)
HIX0026644
HIT000670538 (
ENST00000557238
)
(MAM domain-containing glycosylphosphatidylinositol anchor protein 2 isoform 2.)
genome : 47,340,141 - 48,095,728 (755,588)
query : 1 - 3,635 (3,635/3,635)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14.5, extr 10, mito_pero 9, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026644)
AL133224.4
46500001-46528755 F -
NCBI
AL161664.8
46528756-46699276 F +
NCBI
AL358341.3
46699277-46778893 F +
NCBI
AL512342.2
46778894-46779687 F +
NCBI
AL355099.5
46779688-46935398 F -
NCBI
AL512414.2
46935399-47036477 F -
NCBI
AL591768.2
47036478-47141814 F +
NCBI
AL591769.3
47141815-47273170 F +
NCBI
AL591771.1
47273171-47387133 F +
NCBI
AL359951.4
47387134-47562967 F -
NCBI
AL157792.3
47562968-47747593 F +
NCBI
AL358832.3
47747594-47919941 F +
NCBI
AL079306.3
47919942-48088630 F -
NCBI
AL162551.4
48088631-48100000 F +
NCBI