bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0011260
HIT000204641 (
NM_014252
)
(Mitochondrial ornithine transporter 1.)
genome : 41,363,547 - 41,386,596 (23,050)
query : 1 - 4,021 (4,021/4,038)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001993 : Mitochondrial substrate carrier
IPR018108 : Mitochondrial substrate/solute carrier
GO :
0005488 : Molecular Function : binding
0006810 : Biological Process : transport
0016020 : Cellular Component : membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 11.5, mito 6, nucl 4, extr 3,
E.R._mito 3, mito_pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011260)
HIX0011260
HIT000582916 (
ENST00000478827
)
(Similar to Mitochondrial ornithine transporter 1; Solute carrier family 25 member 15;)
genome : 41,363,548 - 41,382,606 (19,059)
query : 1 - 1,142 (1,142/1,142)
7 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.986;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001993 : Mitochondrial substrate carrier
IPR018108 : Mitochondrial substrate/solute carrier
GO :
0005488 : Molecular Function : binding
0006810 : Biological Process : transport
0016020 : Cellular Component : membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, cyto 2.5, mito 2, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011260)
HIX0011260
HIT000131255 (
ENST00000338625
)
(Mitochondrial ornithine transporter 1.)
genome : 41,363,597 - 41,384,246 (20,650)
query : 1 - 1,621 (1,621/1,621)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001993 : Mitochondrial substrate carrier
IPR018108 : Mitochondrial substrate/solute carrier
GO :
0005488 : Molecular Function : binding
0006810 : Biological Process : transport
0016020 : Cellular Component : membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 9, extr 8, cyto 7, E.R._mito 6, pero 4,
extr_plas 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011260)
HIX0011260
HIT000360802 (
ENST00000379523
)
(Mitochondrial ornithine transporter 1; Solute carrier family 25 member 15;)
genome : 41,363,597 - 41,384,246 (20,650)
query : 1 - 1,483 (1,483/1,483)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001993 : Mitochondrial substrate carrier
IPR018108 : Mitochondrial substrate/solute carrier
GO :
0005488 : Molecular Function : binding
0006810 : Biological Process : transport
0016020 : Cellular Component : membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 8, mito 8, cyto 7, cyto_nucl 6, E.R._mito 5.5,
nucl 3, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011260)
HIX0011260
HIT000541919 (
ENST00000443985
)
(Mitochondrial ornithine transporter 1; Solute carrier family 25 member 15;)
genome : 41,363,597 - 41,384,246 (20,650)
query : 1 - 1,444 (1,444/1,444)
8 exons
identity = 0.997
5'(1.000;1.000;1.000;0.886;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
InterPro :
IPR001993 : Mitochondrial substrate carrier
IPR018108 : Mitochondrial substrate/solute carrier
GO :
0005488 : Molecular Function : binding
0006810 : Biological Process : transport
0016020 : Cellular Component : membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_mito 8.83333, cyto 8.5, cyto_nucl 8.5, mito 8,
extr 6, E.R._mito 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011260)
HIX0011260
HIT000031111
(
BC002702
)
(Mitochondrial ornithine transporter 1; Solute carrier family 25 member 15;)
genome : 41,363,633 - 41,383,965 (20,333)
query : 1 - 1,304 (1,304/1,325)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.994;1.000)3'
coverage = 0.999
InterPro :
IPR001993 : Mitochondrial substrate carrier
IPR018108 : Mitochondrial substrate/solute carrier
GO :
0005488 : Molecular Function : binding
0006810 : Biological Process : transport
0016020 : Cellular Component : membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 11.5, mito 5, extr 4, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011260)
HIX0011260
HIT000432468
(
AK313602
)
(Mitochondrial ornithine transporter 1; Solute carrier family 25 member 15;)
genome : 41,363,665 - 41,383,803 (20,139)
query : 1 - 1,110 (1,110/1,110)
7 exons
identity = 0.995
5'(0.985;0.992;0.996;1.000;1.000;0.994;1.000)3'
coverage = 1.000
InterPro :
IPR001993 : Mitochondrial substrate carrier
IPR018108 : Mitochondrial substrate/solute carrier
GO :
0005488 : Molecular Function : binding
0006810 : Biological Process : transport
0016020 : Cellular Component : membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 12.5, mito 8, nucl 4, E.R._mito 4,
mito_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011260)
HIX0011260
HIT000069738
(
AF112968
)
Representative transcript
(Mitochondrial ornithine transporter 1.)
genome : 41,363,728 - 41,386,579 (22,852)
query : 19 - 2,640 (2,622/2,640)
8 exons
identity = 0.992
5'(0.986;1.000;1.000;1.000;1.000;1.000;0.998;
0.982)3'
coverage = 0.993
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 11.5, mito 6, nucl 4, extr 3,
E.R._mito 3, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011260)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ720668
Mus
sp. (Mouse) : AK154988
Rattus
sp. (Rat) : AY325139
Bos
sp. (Cow) : BC112859
Monodelphis
sp. (Opossum) : ENSMODT00000013244
Oryzias
sp. (Medaka) : ENSORLT00000003885
Pongo
sp. (Orangutan) : ENSPPYT00000006282
Tetraodon
sp. (Tetraodon) : GSTENT00022132001
Danio
sp. (Zebrafish) : NM_001128344
Takifugu
sp. (Fugu) : SINFRUT00000134315
Macaca
sp. (Macaque) : XM_001088596
Equus
sp. (Horse) : XM_001916675
Pan
sp. (Chimpanzee) : XM_509642
Canis
sp. (Dog) : XM_543118
HIX0011260
HIT000491486
(
AK296862
)
(Mitochondrial ornithine transporter 1; Solute carrier family 25 member 15;)
genome : 41,363,717 - 41,384,487 (20,771)
query : 3 - 1,565 (1,563/1,565)
8 exons
identity = 0.994
5'(1.000;1.000;1.000;0.969;1.000;1.000;1.000;
0.989)3'
coverage = 0.999
InterPro :
IPR001993 : Mitochondrial substrate carrier
IPR018108 : Mitochondrial substrate/solute carrier
GO :
0005488 : Molecular Function : binding
0006810 : Biological Process : transport
0016020 : Cellular Component : membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 13, mito 7, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011260)
HIX0011260
HIT000072703
(
AF177333
)
(Mitochondrial ornithine transporter 1; Solute carrier family 25 member 15;)
genome : 41,363,755 - 41,384,247 (20,493)
query : 11 - 1,474 (1,464/1,490)
7 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;0.994;0.996)3'
coverage = 0.993
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 11.5, mito 5, extr 4, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011260)
HIX0011260
HIT000574979 (
ENST00000470509
)
(Similar to Mitochondrial ornithine transporter 1; Solute carrier family 25 member 15;)
genome : 41,367,294 - 41,381,562 (14,269)
query : 1 - 511 (511/511)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001993 : Mitochondrial substrate carrier
IPR018108 : Mitochondrial substrate/solute carrier
GO :
0005488 : Molecular Function : binding
0006810 : Biological Process : transport
0016020 : Cellular Component : membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011260)
HIX0011260
HIT000515665 (
ENST00000417731
)
(Similar to Mitochondrial ornithine transporter 1; Solute carrier family 25 member 15;)
genome : 41,367,294 - 41,381,514 (14,221)
query : 1 - 468 (468/468)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001993 : Mitochondrial substrate carrier
IPR018108 : Mitochondrial substrate/solute carrier
GO :
0005488 : Molecular Function : binding
0006810 : Biological Process : transport
0016020 : Cellular Component : membrane
0055085 : Biological Process : transmembrane transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 13, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011260)
HIX0201992
HIT000660198 (
NR_038258
)
(Similar to Mitochondrial ornithine transporter 1; Solute carrier family 25 member 15;)
genome : 41,371,123 - 41,495,886 (124,764)
query : 1 - 4,360 (4,360/4,374)
8 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR014019 : Phosphatase tensin type
GO :
0005515 : Molecular Function : protein binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, cyto 5.5, cyto_mito 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201992)
HIX0201992
HIT000660199 (
NR_038259
)
(Similar to Mitochondrial ornithine transporter 1; Solute carrier family 25 member 15;)
genome : 41,371,123 - 41,495,886 (124,764)
query : 1 - 4,189 (4,189/4,203)
6 exons
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 12.5, cyto 8.5, extr 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201992)
HIX0201992
HIT000098447
(
BC047078
)
Representative transcript
(Similar to Mitochondrial ornithine transporter 1; Solute carrier family 25 member 15;)
genome : 41,371,127 - 41,495,886 (124,760)
query : 1 - 4,185 (4,185/4,202)
6 exons
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12.5, extr 12, cyto_nucl 11.5, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201992)
Ortholog candidate ( ->
Evola
)
Equus
sp. (Horse) : ENSECAT00000008826
HIX0201992
HIT000021848
(
AK096993
)
(Similar to Mitochondrial ornithine transporter 1; Solute carrier family 25 member 15;)
genome : 41,372,505 - 41,495,874 (123,370)
query : 1 - 2,795 (2,795/2,795)
6 exons
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 27, E.R. 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201992)
HIX0201992
HIT000018099
(
AK093232
)
(Similar to Mitochondrial ornithine transporter 1; Solute carrier family 25 member 15;)
genome : 41,373,449 - 41,382,169 (8,721)
query : 2 - 2,991 (2,990/2,991)
3 exons
identity = 0.999
3'(0.999;0.994;0.999)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 27, E.R. 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201992)
HIX0011260
HIT000470874 (
ENST00000384919
)
(Non-protein coding transcript.)
genome : 41,384,902 - 41,384,997 (96)
query : 1 - 96 (96/96)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011260)
HIX0011260
HIT000658344 (
NR_030352
)
(Non-protein coding transcript.)
genome : 41,384,902 - 41,384,997 (96)
query : 1 - 96 (96/96)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011260)
HIX0011260
HIT000276600
(
CR597405
)
(Hypothetical short protein.)
genome : 41,385,942 - 41,386,596 (655)
query : 1 - 655 (655/655)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto_mito 13, cyto 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0011260)
AL161614.16
41355071-41395070 F +
NCBI