Clickable map CGI

HIX0011260
HIT000204641 ( NM_014252 )
  (Mitochondrial ornithine transporter 1.)
  genome : 41,363,547 - 41,386,596 (23,050)
  query : 1 - 4,021 (4,021/4,038)
  7 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  InterPro :
    IPR001993 : Mitochondrial substrate carrier
    IPR018108 : Mitochondrial substrate/solute carrier
  GO :
    0005488 : Molecular Function : binding
    0006810 : Biological Process : transport
    0016020 : Cellular Component : membrane
    0055085 : Biological Process : transmembrane transport
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 17, cyto_nucl 11.5, mito 6, nucl 4, extr 3,
    E.R._mito 3, mito_pero 3
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0011260)

HIX0011260
HIT000582916 ( ENST00000478827 )
  (Similar to Mitochondrial ornithine transporter 1; Solute carrier family 25 member 15;)
  genome : 41,363,548 - 41,382,606 (19,059)
  query : 1 - 1,142 (1,142/1,142)
  7 exons
  identity = 0.998
  5'(1.000;1.000;1.000;1.000;0.986;1.000;1.000)3'
  coverage = 1.000
  InterPro :
    IPR001993 : Mitochondrial substrate carrier
    IPR018108 : Mitochondrial substrate/solute carrier
  GO :
    0005488 : Molecular Function : binding
    0006810 : Biological Process : transport
    0016020 : Cellular Component : membrane
    0055085 : Biological Process : transmembrane transport
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 26, cyto 2.5, mito 2, cyto_nucl 2
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0011260)

HIX0011260
HIT000131255 ( ENST00000338625 )
  (Mitochondrial ornithine transporter 1.)
  genome : 41,363,597 - 41,384,246 (20,650)
  query : 1 - 1,621 (1,621/1,621)
  7 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  InterPro :
    IPR001993 : Mitochondrial substrate carrier
    IPR018108 : Mitochondrial substrate/solute carrier
  GO :
    0005488 : Molecular Function : binding
    0006810 : Biological Process : transport
    0016020 : Cellular Component : membrane
    0055085 : Biological Process : transmembrane transport
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 9, extr 8, cyto 7, E.R._mito 6, pero 4,
    extr_plas 4
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0011260)

HIX0011260
HIT000360802 ( ENST00000379523 )
  (Mitochondrial ornithine transporter 1; Solute carrier family 25 member 15;)
  genome : 41,363,597 - 41,384,246 (20,650)
  query : 1 - 1,483 (1,483/1,483)
  6 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  InterPro :
    IPR001993 : Mitochondrial substrate carrier
    IPR018108 : Mitochondrial substrate/solute carrier
  GO :
    0005488 : Molecular Function : binding
    0006810 : Biological Process : transport
    0016020 : Cellular Component : membrane
    0055085 : Biological Process : transmembrane transport
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 8, mito 8, cyto 7, cyto_nucl 6, E.R._mito 5.5,
    nucl 3, pero 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0011260)

HIX0011260
HIT000541919 ( ENST00000443985 )
  (Mitochondrial ornithine transporter 1; Solute carrier family 25 member 15;)
  genome : 41,363,597 - 41,384,246 (20,650)
  query : 1 - 1,444 (1,444/1,444)
  8 exons
  identity = 0.997
  5'(1.000;1.000;1.000;0.886;1.000;1.000;1.000;
      1.000)3'
  coverage = 1.000
  InterPro :
    IPR001993 : Mitochondrial substrate carrier
    IPR018108 : Mitochondrial substrate/solute carrier
  GO :
    0005488 : Molecular Function : binding
    0006810 : Biological Process : transport
    0016020 : Cellular Component : membrane
    0055085 : Biological Process : transmembrane transport
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto_mito 8.83333, cyto 8.5, cyto_nucl 8.5, mito 8,
    extr 6, E.R._mito 5.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0011260)

HIX0011260
HIT000031111 ( BC002702 )
  (Mitochondrial ornithine transporter 1; Solute carrier family 25 member 15;)
  genome : 41,363,633 - 41,383,965 (20,333)
  query : 1 - 1,304 (1,304/1,325)
  7 exons
  identity = 0.999
  5'(1.000;1.000;1.000;1.000;1.000;0.994;1.000)3'
  coverage = 0.999
  InterPro :
    IPR001993 : Mitochondrial substrate carrier
    IPR018108 : Mitochondrial substrate/solute carrier
  GO :
    0005488 : Molecular Function : binding
    0006810 : Biological Process : transport
    0016020 : Cellular Component : membrane
    0055085 : Biological Process : transmembrane transport
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 18.5, cyto_nucl 11.5, mito 5, extr 4, nucl 3.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0011260)

HIX0011260
HIT000432468 ( AK313602 )
  (Mitochondrial ornithine transporter 1; Solute carrier family 25 member 15;)
  genome : 41,363,665 - 41,383,803 (20,139)
  query : 1 - 1,110 (1,110/1,110)
  7 exons
  identity = 0.995
  5'(0.985;0.992;0.996;1.000;1.000;0.994;1.000)3'
  coverage = 1.000
  InterPro :
    IPR001993 : Mitochondrial substrate carrier
    IPR018108 : Mitochondrial substrate/solute carrier
  GO :
    0005488 : Molecular Function : binding
    0006810 : Biological Process : transport
    0016020 : Cellular Component : membrane
    0055085 : Biological Process : transmembrane transport
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 19, cyto_nucl 12.5, mito 8, nucl 4, E.R._mito 4,
    mito_pero 4
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0011260)

HIX0011260
HIT000069738 ( AF112968 )
  Representative transcript
  (Mitochondrial ornithine transporter 1.)
  genome : 41,363,728 - 41,386,579 (22,852)
  query : 19 - 2,640 (2,622/2,640)
  8 exons
  identity = 0.992
  5'(0.986;1.000;1.000;1.000;1.000;1.000;0.998;
      0.982)3'
  coverage = 0.993
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 17, cyto_nucl 11.5, mito 6, nucl 4, extr 3,
    E.R._mito 3, mito_pero 3
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0011260)
  Ortholog candidate  ( -> Evola )
    Gallus sp. (Chicken) : AJ720668
    Mus sp. (Mouse) : AK154988
    Rattus sp. (Rat) : AY325139
    Bos sp. (Cow) : BC112859
    Monodelphis sp. (Opossum) : ENSMODT00000013244
    Oryzias sp. (Medaka) : ENSORLT00000003885
    Pongo sp. (Orangutan) : ENSPPYT00000006282
    Tetraodon sp. (Tetraodon) : GSTENT00022132001
    Danio sp. (Zebrafish) : NM_001128344
    Takifugu sp. (Fugu) : SINFRUT00000134315
    Macaca sp. (Macaque) : XM_001088596
    Equus sp. (Horse) : XM_001916675
    Pan sp. (Chimpanzee) : XM_509642
    Canis sp. (Dog) : XM_543118

HIX0011260
HIT000491486 ( AK296862 )
  (Mitochondrial ornithine transporter 1; Solute carrier family 25 member 15;)
  genome : 41,363,717 - 41,384,487 (20,771)
  query : 3 - 1,565 (1,563/1,565)
  8 exons
  identity = 0.994
  5'(1.000;1.000;1.000;0.969;1.000;1.000;1.000;
      0.989)3'
  coverage = 0.999
  InterPro :
    IPR001993 : Mitochondrial substrate carrier
    IPR018108 : Mitochondrial substrate/solute carrier
  GO :
    0005488 : Molecular Function : binding
    0006810 : Biological Process : transport
    0016020 : Cellular Component : membrane
    0055085 : Biological Process : transmembrane transport
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 17.5, cyto_nucl 13, mito 7, nucl 5.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0011260)

HIX0011260
HIT000072703 ( AF177333 )
  (Mitochondrial ornithine transporter 1; Solute carrier family 25 member 15;)
  genome : 41,363,755 - 41,384,247 (20,493)
  query : 11 - 1,474 (1,464/1,490)
  7 exons
  identity = 0.998
  5'(1.000;1.000;1.000;1.000;1.000;0.994;0.996)3'
  coverage = 0.993
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 18.5, cyto_nucl 11.5, mito 5, extr 4, nucl 3.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0011260)

HIX0011260
HIT000574979 ( ENST00000470509 )
  (Similar to Mitochondrial ornithine transporter 1; Solute carrier family 25 member 15;)
  genome : 41,367,294 - 41,381,562 (14,269)
  query : 1 - 511 (511/511)
  4 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  InterPro :
    IPR001993 : Mitochondrial substrate carrier
    IPR018108 : Mitochondrial substrate/solute carrier
  GO :
    0005488 : Molecular Function : binding
    0006810 : Biological Process : transport
    0016020 : Cellular Component : membrane
    0055085 : Biological Process : transmembrane transport
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 30
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0011260)

HIX0011260
HIT000515665 ( ENST00000417731 )
  (Similar to Mitochondrial ornithine transporter 1; Solute carrier family 25 member 15;)
  genome : 41,367,294 - 41,381,514 (14,221)
  query : 1 - 468 (468/468)
  3 exons
  identity = 1.000
  5'(1.000;1.000;1.000)3'
  coverage = 1.000
  InterPro :
    IPR001993 : Mitochondrial substrate carrier
    IPR018108 : Mitochondrial substrate/solute carrier
  GO :
    0005488 : Molecular Function : binding
    0006810 : Biological Process : transport
    0016020 : Cellular Component : membrane
    0055085 : Biological Process : transmembrane transport
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 15, extr 13, mito 3
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0011260)

HIX0201992
HIT000660198 ( NR_038258 )
  (Similar to Mitochondrial ornithine transporter 1; Solute carrier family 25 member 15;)
  genome : 41,371,123 - 41,495,886 (124,764)
  query : 1 - 4,360 (4,360/4,374)
  8 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
      1.000)5'
  coverage = 1.000
  InterPro :
    IPR014019 : Phosphatase tensin type
  GO :
    0005515 : Molecular Function : protein binding
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 24, cyto 5.5, cyto_mito 5
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0201992)

HIX0201992
HIT000660199 ( NR_038259 )
  (Similar to Mitochondrial ornithine transporter 1; Solute carrier family 25 member 15;)
  genome : 41,371,123 - 41,495,886 (124,764)
  query : 1 - 4,189 (4,189/4,203)
  6 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 13.5, cyto_nucl 12.5, cyto 8.5, extr 8
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0201992)

HIX0201992
HIT000098447 ( BC047078 )
  Representative transcript
  (Similar to Mitochondrial ornithine transporter 1; Solute carrier family 25 member 15;)
  genome : 41,371,127 - 41,495,886 (124,760)
  query : 1 - 4,185 (4,185/4,202)
  6 exons
  identity = 0.999
  3'(0.999;1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 12.5, extr 12, cyto_nucl 11.5, cyto 7.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0201992)
  Ortholog candidate  ( -> Evola )
    Equus sp. (Horse) : ENSECAT00000008826

HIX0201992
HIT000021848 ( AK096993 )
  (Similar to Mitochondrial ornithine transporter 1; Solute carrier family 25 member 15;)
  genome : 41,372,505 - 41,495,874 (123,370)
  query : 1 - 2,795 (2,795/2,795)
  6 exons
  identity = 0.999
  3'(0.999;1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 27, E.R. 2, lyso 2
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0201992)

HIX0201992
HIT000018099 ( AK093232 )
  (Similar to Mitochondrial ornithine transporter 1; Solute carrier family 25 member 15;)
  genome : 41,373,449 - 41,382,169 (8,721)
  query : 2 - 2,991 (2,990/2,991)
  3 exons
  identity = 0.999
  3'(0.999;0.994;0.999)5'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    extr 27, E.R. 2, lyso 2
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0201992)

HIX0011260
HIT000470874 ( ENST00000384919 )
  (Non-protein coding transcript.)
  genome : 41,384,902 - 41,384,997 (96)
  query : 1 - 96 (96/96)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0011260)

HIX0011260
HIT000658344 ( NR_030352 )
  (Non-protein coding transcript.)
  genome : 41,384,902 - 41,384,997 (96)
  query : 1 - 96 (96/96)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0011260)

HIX0011260
HIT000276600 ( CR597405 )
  (Hypothetical short protein.)
  genome : 41,385,942 - 41,386,596 (655)
  query : 1 - 655 (655/655)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 13, cyto_mito 13, cyto 12.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0011260)

HIX0201992
HIT000556052 ( ENST00000458118 )
  (Similar to Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase TPTE2; EC=3.1.3.67; Lipid phosphatase TPIP; TPTE and PTEN homologous inositol lipid phosphatase;)
  genome : 41,396,432 - 41,438,488 (42,057)
  query : 1 - 728 (728/728)
  8 exons
  identity = 0.988
  3'(1.000;1.000;1.000;0.952;1.000;0.966;1.000;
      1.000)5'
  coverage = 1.000
  InterPro :
    IPR008973 : C2 calcium/lipid-binding domain, CaLB
    IPR014020 : Tensin phosphatase, C2 domain
  GO :
    0005515 : Molecular Function : protein binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 16.5, cyto_nucl 14, extr 11
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0201992)

HIX0201992
HIT000530839 ( ENST00000432905 )
  (Similar to Tyrosine phosphatase isoform C;)
  genome : 41,400,485 - 41,429,127 (28,643)
  query : 1 - 746 (746/746)
  4 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 15, cyto 12, cyto_nucl 7.33333,
    cyto_plas 6.83333
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0201992)

HIX0201992
HIT000360794 ( ENST00000379515 )
  (Similar to Phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase TPTE2; EC=3.1.3.67; Lipid phosphatase TPIP; TPTE and PTEN homologous inositol lipid phosphatase;)
  genome : 41,400,642 - 41,495,885 (95,244)
  query : 1 - 450 (450/450)
  5 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 13.5, cyto_nucl 12.5, cyto 8.5, extr 8
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0201992)

HIX0202006
HIT000124090 ( ENST00000325094 )
  (Conserved hypothetical protein.)
  genome : 41,437,730 - 41,438,039 (310)
  query : 1 - 306 (306/306)
  1 exon
  identity = 0.987
  3'(0.987)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 16.5, cyto_nucl 11, mito 10, cyto 4.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0202006)

HIX0202006
HIT000556106 ( ENST00000458172 )
  Representative transcript
  (Cytochrome c, class IA/ IB family protein.)
  genome : 41,437,735 - 41,438,038 (304)
  query : 1 - 304 (304/304)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  InterPro :
    IPR002327 : Cytochrome c, class IA/ IB
    IPR009056 : Cytochrome c domain
  GO :
    0005506 : Molecular Function : iron ion binding
    0009055 : Molecular Function : electron carrier activity
    0020037 : Molecular Function : heme binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 17, cyto 11, pero 2
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0202006)

HIX0201992
HIT000046713 ( AK126840 )
  (Similar to Suppressor of G2 allele of SKP1 homolog; Protein 40-6-3; Sgt1;)
  genome : 41,469,454 - 41,489,080 (19,627)
  query : 1 - 2,174 (2,174/2,189)
  2 exons
  identity = 0.981
  3'(0.783;0.990)5'
  coverage = 0.993
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 12, nucl 9, cyto_nucl 7, mito 6.5, E.R._mito 4
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0201992)

HIX0201992
HIT000572278 ( ENST00000467676 )
  (Similar to Suppressor of G2 allele of SKP1 homolog isoform SGT1A.)
  genome : 41,482,294 - 41,488,241 (5,948)
  query : 1 - 382 (382/382)
  5 exons
  identity = 0.979
  3'(1.000;0.925;1.000;1.000;1.000)5'
  coverage = 1.000
  InterPro :
    IPR011990 : Tetratricopeptide-like helical
    IPR013026 : Tetratricopeptide repeat-containing
  GO :
    0005488 : Molecular Function : binding
    0005515 : Molecular Function : protein binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 25, cyto 5.5, cyto_nucl 3.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0201992)

HIX0201992
HIT000597471 ( ENST00000494063 )
  (Similar to Suppressor of G2 allele of SKP1 homolog isoform SGT1A.)
  genome : 41,482,295 - 41,495,855 (13,561)
  query : 1 - 446 (446/446)
  6 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  InterPro :
    IPR011990 : Tetratricopeptide-like helical
    IPR013026 : Tetratricopeptide repeat-containing
  GO :
    0005488 : Molecular Function : binding
    0005515 : Molecular Function : protein binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 26, cyto 6
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0201992)

HIX0201992
HIT000038977 ( BC020814 )
  (Pseudogene candidate (Suppressor of G2 allele of SKP1 homolog; Protein 40-6-3; Sgt1;).)
  genome : 41,486,026 - 41,495,910 (9,885)
  query : 1 - 1,048 (1,048/1,078)
  3 exons
  identity = 0.998
  3'(0.998;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 17.5, cyto_nucl 13.5, extr 8, cyto 6.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0201992)

HIX0201992
HIT000398599 ( NR_003365 )
  (Similar to Suppressor of G2 allele of SKP1 homolog; Protein 40-6-3; Sgt1;)
  genome : 41,486,026 - 41,495,910 (9,885)
  query : 1 - 1,048 (1,048/1,078)
  3 exons
  identity = 1.000
  3'(1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 17.5, cyto_nucl 13.5, extr 8, cyto 6.5
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0201992)

HIX0201992
HIT000116902 ( ENST00000304932 )
  (Similar to Suppressor of G2 allele of SKP1 homolog; Protein 40-6-3; Sgt1;)
  genome : 41,486,016 - 41,495,910 (9,895)
  query : 1 - 1,058 (1,058/1,058)
  3 exons
  identity = 1.000
  3'(1.000;1.000;1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 17.5, cyto_nucl 13.5, extr 8, cyto 6.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0201992)

HIX0201992
HIT000066932 ( AF086053 )
  (Hypothetical short protein.)
  genome : 41,486,026 - 41,486,427 (402)
  query : 1 - 402 (402/411)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    MEMBRANE PROTEIN
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0201992)

HIX0201992
HIT000554897 ( ENST00000456963 )
  (Non-protein coding transcript.)
  genome : 41,495,610 - 41,495,792 (183)
  query : 1 - 96 (96/96)
  2 exons
  identity = 1.000
  3'(1.000;1.000)5'
  coverage = 1.000
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0201992)

HIX0011262
HIT000055346 ( BX640798 )
  (Similar to ETS-related transcription factor Elf-1; E74-like factor 1;)
  genome : 41,506,055 - 41,635,076 (129,022)
  query : 3 - 3,020 (3,018/3,070)
  6 exons
  identity = 0.998
  3'(1.000)5'
  coverage = 0.999
  InterPro :
    IPR000418 : Ets
    IPR011991 : Winged helix-turn-helix transcription repressor DNA-binding
  GO :
    0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
    0006355 : Biological Process : regulation of transcription, DNA-dependent
    0043565 : Molecular Function : sequence-specific DNA binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0011262)

HIX0011262
HIT000214745 ( NM_172373 )
  (ETS-related transcription factor Elf-1 isoform a.)
  genome : 41,506,055 - 41,593,508 (87,454)
  query : 1 - 3,739 (3,739/3,760)
  9 exons
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  InterPro :
    IPR000418 : Ets
    IPR011991 : Winged helix-turn-helix transcription repressor DNA-binding
    IPR022084 : Transcription factor Elf-1, N-terminal
  GO :
    0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
    0006355 : Biological Process : regulation of transcription, DNA-dependent
    0043565 : Molecular Function : sequence-specific DNA binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 31
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0011262)

HIX0011262
HIT000561327 ( NM_001145353 )
  (ETS-related transcription factor Elf-1 isoform b.)
  genome : 41,506,055 - 41,556,418 (50,364)
  query : 1 - 3,522 (3,522/3,543)
  8 exons
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  InterPro :
    IPR000418 : Ets
    IPR011991 : Winged helix-turn-helix transcription repressor DNA-binding
    IPR022084 : Transcription factor Elf-1, N-terminal
  GO :
    0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
    0006355 : Biological Process : regulation of transcription, DNA-dependent
    0043565 : Molecular Function : sequence-specific DNA binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 31
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0011262)

HIX0011262
HIT000540035 ( ENST00000442101 )
  (ETS-related transcription factor Elf-1 isoform b.)
  genome : 41,506,056 - 41,556,418 (50,363)
  query : 1 - 3,521 (3,521/3,521)
  8 exons
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  InterPro :
    IPR000418 : Ets
    IPR011991 : Winged helix-turn-helix transcription repressor DNA-binding
    IPR022084 : Transcription factor Elf-1, N-terminal
  GO :
    0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
    0006355 : Biological Process : regulation of transcription, DNA-dependent
    0043565 : Molecular Function : sequence-specific DNA binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 31
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0011262)

HIX0011262
HIT000041019 ( BC030507 )
  (ETS-related transcription factor Elf-1 isoform a.)
  genome : 41,506,164 - 41,556,418 (50,255)
  query : 1 - 3,485 (3,485/3,499)
  8 exons
  identity = 0.999
  3'(1.000)5'
  coverage = 1.000
  InterPro :
    IPR000418 : Ets
    IPR011991 : Winged helix-turn-helix transcription repressor DNA-binding
    IPR022084 : Transcription factor Elf-1, N-terminal
  GO :
    0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
    0006355 : Biological Process : regulation of transcription, DNA-dependent
    0043565 : Molecular Function : sequence-specific DNA binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 31
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0011262)

HIX0011262
HIT000087516 ( BC010575 )
  (ETS-related transcription factor Elf-1 isoform b.)
  genome : 41,506,168 - 41,556,378 (50,211)
  query : 1 - 3,559 (3,559/3,572)
  9 exons
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  InterPro :
    IPR000418 : Ets
    IPR011991 : Winged helix-turn-helix transcription repressor DNA-binding
    IPR022084 : Transcription factor Elf-1, N-terminal
  GO :
    0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
    0006355 : Biological Process : regulation of transcription, DNA-dependent
    0043565 : Molecular Function : sequence-specific DNA binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0011262)

HIX0079508
HIT000066711 ( AF085832 )
  Representative transcript
  (Hypothetical short protein.)
  genome : 41,506,168 - 41,506,761 (594)
  query : 11 - 604 (594/604)
  1 exon
  identity = 0.998
  5'(0.998)3'
  coverage = 0.998
  SOSUI :
    SOLUBLE PROTEIN
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0079508)

HIX0011262
HIT000020321 ( AK095466 )
  (Similar to ETS-related transcription factor Elf-1; E74-like factor 1;)
  genome : 41,506,165 - 41,508,105 (1,941)
  query : 1 - 1,941 (1,941/1,941)
  1 exon
  identity = 0.998
  3'(0.998)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 11, mito 10, cyto_nucl 5, E.R._mito 5, pero 4
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0011262)

HIX0011262
HIT000602031 ( ENST00000498824 )
  (ETS-related transcription factor Elf-1 isoform b.)
  genome : 41,506,168 - 41,556,378 (50,211)
  query : 1 - 3,559 (3,559/3,559)
  9 exons
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  InterPro :
    IPR000418 : Ets
    IPR011991 : Winged helix-turn-helix transcription repressor DNA-binding
    IPR022084 : Transcription factor Elf-1, N-terminal
  GO :
    0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
    0006355 : Biological Process : regulation of transcription, DNA-dependent
    0043565 : Molecular Function : sequence-specific DNA binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 32
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0011262)

HIX0011262
HIT000105003 ( ENST00000239882 )
  (ETS-related transcription factor Elf-1 isoform a.)
  genome : 41,506,170 - 41,593,450 (87,281)
  query : 1 - 3,566 (3,566/3,566)
  9 exons
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 31
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0011262)

HIX0011262
HIT000360777 ( ENST00000379498 )
  (Similar to ETS-related transcription factor Elf-1; E74-like factor 1;)
  genome : 41,506,177 - 41,556,418 (50,242)
  query : 1 - 3,472 (3,472/3,472)
  8 exons
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  InterPro :
    IPR000418 : Ets
    IPR011991 : Winged helix-turn-helix transcription repressor DNA-binding
    IPR022084 : Transcription factor Elf-1, N-terminal
  GO :
    0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
    0006355 : Biological Process : regulation of transcription, DNA-dependent
    0043565 : Molecular Function : sequence-specific DNA binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 31
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0011262)

HIX0011262
HIT000286330 ( CR607135 )
  (Similar to ETS-related transcription factor Elf-1; E74-like factor 1;)
  genome : 41,506,195 - 41,507,753 (1,559)
  query : 1 - 1,559 (1,559/1,559)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 18, extr 7, nucl 6
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0011262)

HIX0011262
HIT000294439 ( CR615244 )
  (Hypothetical short protein.)
  genome : 41,506,206 - 41,507,236 (1,031)
  query : 1 - 1,031 (1,031/1,031)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    mito 23, extr 4, cyto 2, golg 2, extr_plas 2,
    cyto_golg 2
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0011262)

HIX0011262
HIT000498913 ( AK304289 )
  (ETS-related transcription factor Elf-1; E74-like factor 1;)
  genome : 41,507,488 - 41,556,361 (48,874)
  query : 1 - 2,032 (2,032/2,032)
  8 exons
  identity = 0.999
  3'(1.000)5'
  coverage = 1.000
  InterPro :
    IPR000418 : Ets
    IPR011991 : Winged helix-turn-helix transcription repressor DNA-binding
    IPR022084 : Transcription factor Elf-1, N-terminal
  GO :
    0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
    0006355 : Biological Process : regulation of transcription, DNA-dependent
    0043565 : Molecular Function : sequence-specific DNA binding
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    nucl 31
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0011262)

AL161614.16
41353516-41399667 F +
NCBI

AL590064.9
41399668-41471433 F +
NCBI

AL157877.11
41471434-41513515 F +
NCBI

bases per tick : kb first site :
main : All Human Genes JIGSAW prediction ESTs assembly
homology : UCSC CCDS Pseudogene.org Conserved regions ( Segmental duplication P.troglodytes P.abelii M.mulatta M.musculus R.norvegicus C.familiaris E.caballus B.taurus M.domestica G.gallus D.rerio O.latipes T.nigroviridis T.rubripes )
gene prediction : FGENESH GenScan HMMgene tRNA
show... : SNPs ESTs(summary) ESTs(detail) CAGE tag(summary) CAGE tag(detail)
sequence viewer : = ( , )