Clickable map CGI

HIX0019013
HIT000315349 ( NM_000705 )
  (Potassium-transporting ATPase subunit beta.)
  genome : 114,303,123 - 114,312,513 (9,391)
  query : 1 - 1,496 (1,496/1,509)
  7 exons
  identity = 0.999
  3'(1.000;1.000;1.000;1.000;1.000;1.000;0.994)5'
  coverage = 1.000
  InterPro :
    IPR000402 : ATPase, P-type cation exchange, beta subunit
  GO :
    0005391 : Molecular Function : sodium:potassium-exchanging ATPase activity
    0006754 : Biological Process : ATP biosynthetic process
    0006813 : Biological Process : potassium ion transport
    0006814 : Biological Process : sodium ion transport
    0016020 : Cellular Component : membrane
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 21, nucl 3, golg 3, cyto 2, mito_nucl 2
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0019013)

HIX0019013
HIT000129488 ( ENST00000335288 )
  (Potassium-transporting ATPase subunit beta.)
  genome : 114,303,124 - 114,312,501 (9,378)
  query : 1 - 1,483 (1,483/1,483)
  7 exons
  identity = 1.000
  3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
  coverage = 1.000
  InterPro :
    IPR000402 : ATPase, P-type cation exchange, beta subunit
  GO :
    0005391 : Molecular Function : sodium:potassium-exchanging ATPase activity
    0006754 : Biological Process : ATP biosynthetic process
    0006813 : Biological Process : potassium ion transport
    0006814 : Biological Process : sodium ion transport
    0016020 : Cellular Component : membrane
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 21, nucl 3, golg 3, cyto 2, mito_nucl 2
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0019013)

HIX0019013
HIT000428995 ( AK310129 )
  (Similar to Potassium-transporting ATPase subunit beta; Gastric H(+)/K(+) ATPase subunit beta; Proton pump beta chain;)
  genome : 114,306,753 - 114,312,513 (5,761)
  query : 1 - 1,044 (1,044/1,044)
  4 exons
  identity = 0.997
  3'(1.000;0.982;1.000;0.994)5'
  coverage = 1.000
  InterPro :
    IPR000402 : ATPase, P-type cation exchange, beta subunit
  GO :
    0005391 : Molecular Function : sodium:potassium-exchanging ATPase activity
    0006754 : Biological Process : ATP biosynthetic process
    0006813 : Biological Process : potassium ion transport
    0006814 : Biological Process : sodium ion transport
    0016020 : Cellular Component : membrane
  SOSUI :
    MEMBRANE PROTEIN
  PSORT :
    plas 28, nucl 1, cyto 1, mito 1, cyto_nucl 1, lyso 1,
    cyto_mito 1, mito_nucl 1
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0019013)

HIX0130769
HIT000449889 ( DQ583358 )
  Representative transcript
  (Non-protein coding transcript.)
  genome : 114,308,603 - 114,308,634 (32)
  query : 1 - 32 (32/32)
  1 exon
  identity = 1.000
  5'(1.000)3'
  coverage = 1.000
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0130769)

HIX0019013
HIT000097372 ( BC042846 )
  (Similar to Potassium-transporting ATPase subunit beta; Gastric H(+)/K(+) ATPase subunit beta; Proton pump beta chain;)
  genome : 114,312,020 - 114,312,502 (483)
  query : 1 - 317 (317/405)
  2 exons
  identity = 0.997
  3'(1.000;0.994)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 25, cyto 4
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0019013)

HIX0037605
HIT000129753 ( ENST00000335678 )
  (Rhodopsin kinase precursor.)
  genome : 114,321,470 - 114,438,724 (117,255)
  query : 1 - 2,312 (2,312/2,312)
  7 exons
  identity = 1.000
  5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 22, nucl 8.5, cyto_nucl 5.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0037605)

HIX0037605
HIT000422709 ( AK289912 )
  Representative transcript
  (Rhodopsin kinase precursor.)
  genome : 114,321,470 - 114,438,724 (117,255)
  query : 1 - 2,312 (2,312/2,312)
  7 exons
  identity = 1.000
  5'(0.999;1.000;1.000;1.000;1.000;1.000;1.000)3'
  coverage = 1.000
  EC number :
    EC 2.7.1.37
  InterPro :
    IPR000239 : GPCR kinase
    IPR000342 : Regulator of G protein signalling
    IPR000719 : Protein kinase, catalytic domain
    IPR000961 : AGC-kinase, C-terminal
    IPR002290 : Serine/threonine-protein kinase domain
    IPR008271 : Serine/threonine-protein kinase, active site
    IPR011009 : Protein kinase-like domain
    IPR016137 : Regulator of G protein signalling superfamily
    IPR017441 : Protein kinase, ATP binding site
    IPR017442 : Serine/threonine-protein kinase-like domain
  GO :
    0004672 : Molecular Function : protein kinase activity
    0004674 : Molecular Function : protein serine/threonine kinase activity
    0004703 : Molecular Function : G-protein coupled receptor kinase activity
    0004871 : Molecular Function : signal transducer activity
    0005524 : Molecular Function : ATP binding
    0006468 : Biological Process : protein phosphorylation
    0007165 : Biological Process : signal transduction
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 15, cyto_nucl 14, nucl 11, pero 3
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0037605)
  Ortholog candidate  ( -> Evola )
    Oryzias sp. (Medaka) : AB009569
    Oryzias sp. (Medaka) : AB154360
    Danio sp. (Zebrafish) : AB212994
    Mus sp. (Mouse) : BC096611
    Equus sp. (Horse) : ENSECAT00000001864
    Macaca sp. (Macaque) : ENSMMUT00000010381
    Pongo sp. (Orangutan) : ENSPPYT00000006552
    Tetraodon sp. (Tetraodon) : GSTENT00017937001
    Tetraodon sp. (Tetraodon) : GSTENT00022127001
    Tetraodon sp. (Tetraodon) : GSTENT00025963001
    Bos sp. (Cow) : M73836
    Takifugu sp. (Fugu) : SINFRUT00000134319
    Takifugu sp. (Fugu) : SINFRUT00000138418
    Takifugu sp. (Fugu) : SINFRUT00000162920
    Rattus sp. (Rat) : U63971
    Monodelphis sp. (Opossum) : XM_001364619
    Canis sp. (Dog) : XM_542675
    Pan sp. (Chimpanzee) : XR_023695

HIX0037605
HIT000056150 ( BX647503 )
  (Similar to Rhodopsin kinase; RK; EC=2.7.11.14; G protein-coupled receptor kinase 1; Precursor;)
  genome : 114,437,448 - 114,440,708 (3,261)
  query : 1 - 3,260 (3,260/3,278)
  1 exon
  identity = 0.997
  5'(0.997)3'
  coverage = 1.000
  InterPro :
    IPR000239 : GPCR kinase
  GO :
    0004703 : Molecular Function : G-protein coupled receptor kinase activity
    0005524 : Molecular Function : ATP binding
    0006468 : Biological Process : protein phosphorylation
    0007165 : Biological Process : signal transduction
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    cyto 11.5, cyto_nucl 11, cyto_pero 8.33333, extr 8,
    nucl 6, mito 5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0037605)

HIX0171804
HIT000014049 ( AK057435 )
  Representative transcript
  (Similar to T. brucei spp.-specific protein;)
  genome : 114,451,484 - 114,454,062 (2,579)
  query : 1 - 2,589 (2,589/2,589)
  1 exon
  identity = 0.993
  3'(0.993)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 19, pero 6, mito 4, nucl 2.5
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0171804)

HIX0171804
HIT000511469 ( ENST00000413535 )
  (Similar to T. brucei spp.-specific protein;)
  genome : 114,451,484 - 114,454,062 (2,579)
  query : 1 - 2,577 (2,577/2,577)
  1 exon
  identity = 0.999
  3'(0.999)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 18, mito 7, cyto 4, cyto_pero 3.5
  Ensembl
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0171804)

HIX0171804
HIT000657710 ( NR_028064 )
  (Similar to T. brucei spp.-specific protein;)
  genome : 114,451,484 - 114,454,062 (2,579)
  query : 1 - 2,579 (2,579/2,579)
  1 exon
  identity = 1.000
  3'(1.000)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 18, pero 6, mito 5, cyto_nucl 2
  RefSeq
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0171804)

HIX0171804
HIT000022363 ( AK097509 )
  (Conserved hypothetical protein.)
  genome : 114,451,484 - 114,453,515 (2,032)
  query : 1 - 2,032 (2,032/2,032)
  1 exon
  identity = 0.999
  3'(0.999)5'
  coverage = 1.000
  SOSUI :
    SOLUBLE PROTEIN
  PSORT :
    extr 18, pero 6, mito 5, cyto_nucl 2
  H-InvDB(Transcript view)
  H-InvDB(Locus view)
  DDBJ
  cDNA-genome Alignment
  cDNA Multiple Alignment
    (HIX0171804)

bases per tick : kb first site :
main : All Human Genes JIGSAW prediction ESTs assembly
homology : UCSC CCDS Pseudogene.org Conserved regions ( Segmental duplication P.troglodytes P.abelii M.mulatta M.musculus R.norvegicus C.familiaris E.caballus B.taurus M.domestica G.gallus D.rerio O.latipes T.nigroviridis T.rubripes )
gene prediction : FGENESH GenScan HMMgene tRNA
show... : SNPs ESTs(summary) ESTs(detail) CAGE tag(summary) CAGE tag(detail)
sequence viewer : = ( , )