bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0220315
HIT000662107 (
ENST00000548059
)
(Conserved hypothetical protein.)
genome : 75,050,341 - 75,050,640 (300)
query : 1 - 300 (300/300)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 7.5, cyto_nucl 6.5, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220315)
HIX0059104
HIT000539006 (
ENST00000441072
)
(Autophagy protein Atg8 ubiquitin like family protein.)
genome : 75,057,554 - 75,057,921 (368)
query : 1 - 368 (368/368)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto 5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059104)
HIX0059104
HIT000137186 (
ENST00000344556
)
(Autophagy protein Atg8 ubiquitin like family protein.)
genome : 75,057,580 - 75,057,921 (342)
query : 1 - 342 (342/342)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, nucl 4, cyto 4, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0059104)
HIX0220269
HIT000661377 (
ENST00000547218
)
(Transcription initiation factor TAFII31 family protein.)
genome : 75,121,818 - 75,122,631 (814)
query : 1 - 814 (814/814)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 12.5, extr 5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220269)
HIX0220011
HIT000663593 (
ENST00000549762
)
(Hypothetical short protein.)
genome : 75,414,749 - 75,435,052 (20,304)
query : 1 - 543 (543/543)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 16, extr 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220011)
HIX0220011
HIT000663840 (
ENST00000550049
)
(Hypothetical short protein.)
genome : 75,419,754 - 75,438,573 (18,820)
query : 1 - 732 (732/732)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, extr 12
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220011)
HIX0220011
HIT000661224 (
ENST00000547040
)
(Hypothetical protein.)
genome : 75,419,767 - 75,437,150 (17,384)
query : 1 - 2,631 (2,631/2,631)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, mito_nucl 12, extr 4, plas 2, cyto 2, mito 2,
golg 2, cyto_plas 2, cyto_golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220011)
HIX0129670
HIT000046108
(
AK126235
)
Representative transcript
(Potassium voltage-gated channel subfamily C member 2 isoform KV3.2d.)
genome : 75,433,897 - 75,436,013 (2,117)
query : 1 - 2,117 (2,117/2,117)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0129670)
HIX0219874
HIT000334610
(
BC093635
)
Representative transcript
(Potassium voltage-gated channel subfamily C member 2; Voltage-gated potassium channel Kv3.2;)
genome : 75,436,067 - 75,603,062 (166,996)
query : 1 - 1,798 (1,798/1,798)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000210 : BTB/POZ-like
IPR003091 : Potassium channel
IPR003131 : Potassium channel tetramerisation-type BTB domain
IPR003968 : Potassium channel, voltage dependent, Kv
IPR003974 : Potassium channel, voltage dependent, Kv3
IPR005821 : Ion transport domain
IPR011333 : BTB/POZ fold
IPR027359 : Voltage-dependent channel, four helix bundle domain
IPR028325 : Voltage-gated potassium channel
GO :
0005216 : Molecular Function : ion channel activity
0005249 : Molecular Function : voltage-gated potassium channel activity
0005515 : Molecular Function : protein binding
0006811 : Biological Process : ion transport
0006813 : Biological Process : potassium ion transport
0008076 : Cellular Component : voltage-gated potassium channel complex
0016020 : Cellular Component : membrane
0051260 : Biological Process : protein homooligomerization
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219874)
HIX0219874
HIT000340120
(
BC111991
)
(Potassium voltage-gated channel subfamily C member 2; Voltage-gated potassium channel Kv3.2;)
genome : 75,436,071 - 75,603,062 (166,992)
query : 1 - 1,794 (1,794/1,794)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000210 : BTB/POZ-like
IPR003091 : Potassium channel
IPR003131 : Potassium channel tetramerisation-type BTB domain
IPR003968 : Potassium channel, voltage dependent, Kv
IPR003974 : Potassium channel, voltage dependent, Kv3
IPR005821 : Ion transport domain
IPR011333 : BTB/POZ fold
IPR027359 : Voltage-dependent channel, four helix bundle domain
IPR028325 : Voltage-gated potassium channel
GO :
0005216 : Molecular Function : ion channel activity
0005249 : Molecular Function : voltage-gated potassium channel activity
0005515 : Molecular Function : protein binding
0006811 : Biological Process : ion transport
0006813 : Biological Process : potassium ion transport
0008076 : Cellular Component : voltage-gated potassium channel complex
0016020 : Cellular Component : membrane
0051260 : Biological Process : protein homooligomerization
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219874)
HIX0219874
HIT000488893
(
AK294269
)
(Potassium voltage-gated channel subfamily C member 2; Voltage-gated potassium channel Kv3.2;)
genome : 75,436,741 - 75,603,239 (166,499)
query : 2 - 2,169 (2,168/2,169)
4 exons
identity = 0.999
3'(1.000;0.999;0.999;1.000)5'
coverage = 1.000
InterPro :
IPR000210 : BTB/POZ-like
IPR003091 : Potassium channel
IPR003131 : Potassium channel tetramerisation-type BTB domain
IPR003968 : Potassium channel, voltage dependent, Kv
IPR003974 : Potassium channel, voltage dependent, Kv3
IPR005821 : Ion transport domain
IPR011333 : BTB/POZ fold
IPR027359 : Voltage-dependent channel, four helix bundle domain
IPR028325 : Voltage-gated potassium channel
GO :
0005216 : Molecular Function : ion channel activity
0005249 : Molecular Function : voltage-gated potassium channel activity
0005515 : Molecular Function : protein binding
0006811 : Biological Process : ion transport
0006813 : Biological Process : potassium ion transport
0008076 : Cellular Component : voltage-gated potassium channel complex
0016020 : Cellular Component : membrane
0051260 : Biological Process : protein homooligomerization
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219874)
HIX0219874
HIT000639063 (
ENST00000540018
)
(Voltage-gated potassium channel family protein.)
genome : 75,436,741 - 75,603,239 (166,499)
query : 1 - 2,168 (2,168/2,168)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219874)
HIX0219874
HIT000075743
(
AF268896
)
(Potassium voltage-gated channel subfamily C member 2; Voltage-gated potassium channel Kv3.2;)
genome : 75,436,878 - 75,601,784 (164,907)
query : 1 - 1,945 (1,945/1,964)
4 exons
identity = 0.999
3'(1.000;1.000;1.000;0.999)5'
coverage = 0.990
InterPro :
IPR000210 : BTB/POZ-like
IPR003091 : Potassium channel
IPR003131 : Potassium channel tetramerisation-type BTB domain
IPR003968 : Potassium channel, voltage dependent, Kv
IPR003974 : Potassium channel, voltage dependent, Kv3
IPR005821 : Ion transport domain
IPR011333 : BTB/POZ fold
IPR027359 : Voltage-dependent channel, four helix bundle domain
IPR028325 : Voltage-gated potassium channel
GO :
0005216 : Molecular Function : ion channel activity
0005249 : Molecular Function : voltage-gated potassium channel activity
0005515 : Molecular Function : protein binding
0006811 : Biological Process : ion transport
0006813 : Biological Process : potassium ion transport
0008076 : Cellular Component : voltage-gated potassium channel complex
0016020 : Cellular Component : membrane
0051260 : Biological Process : protein homooligomerization
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219874)
HIX0219874
HIT000084491
(
AY118169
)
(Voltage-gated potassium channel family protein.)
genome : 75,436,885 - 75,601,763 (164,879)
query : 1 - 1,917 (1,917/1,917)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000210 : BTB/POZ-like
IPR003091 : Potassium channel
IPR003131 : Potassium channel tetramerisation-type BTB domain
IPR003968 : Potassium channel, voltage dependent, Kv
IPR003974 : Potassium channel, voltage dependent, Kv3
IPR005821 : Ion transport domain
IPR011333 : BTB/POZ fold
IPR027359 : Voltage-dependent channel, four helix bundle domain
IPR028325 : Voltage-gated potassium channel
GO :
0005216 : Molecular Function : ion channel activity
0005249 : Molecular Function : voltage-gated potassium channel activity
0005515 : Molecular Function : protein binding
0006811 : Biological Process : ion transport
0006813 : Biological Process : potassium ion transport
0008076 : Cellular Component : voltage-gated potassium channel complex
0016020 : Cellular Component : membrane
0051260 : Biological Process : protein homooligomerization
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219874)
HIX0219874
HIT000428111
(
AK309245
)
(Potassium voltage-gated channel subfamily C member 2 isoform 4.)
genome : 75,437,137 - 75,603,215 (166,079)
query : 1 - 2,486 (2,486/2,486)
5 exons
identity = 0.998
3'(0.998;0.994;0.999;0.996;1.000)5'
coverage = 1.000
InterPro :
IPR000210 : BTB/POZ-like
IPR003091 : Potassium channel
IPR003131 : Potassium channel tetramerisation-type BTB domain
IPR003968 : Potassium channel, voltage dependent, Kv
IPR003974 : Potassium channel, voltage dependent, Kv3
IPR005821 : Ion transport domain
IPR011333 : BTB/POZ fold
IPR027359 : Voltage-dependent channel, four helix bundle domain
IPR028325 : Voltage-gated potassium channel
GO :
0005216 : Molecular Function : ion channel activity
0005249 : Molecular Function : voltage-gated potassium channel activity
0005515 : Molecular Function : protein binding
0006811 : Biological Process : ion transport
0006813 : Biological Process : potassium ion transport
0008076 : Cellular Component : voltage-gated potassium channel complex
0016020 : Cellular Component : membrane
0051260 : Biological Process : protein homooligomerization
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219874)
HIX0219874
HIT000476746 (
ENST00000393288
)
(Voltage-gated potassium channel family protein.)
genome : 75,437,137 - 75,603,215 (166,079)
query : 1 - 2,485 (2,485/2,485)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219874)
HIX0219874
HIT000662270 (
ENST00000548243
)
(Potassium channel family protein.)
genome : 75,442,009 - 75,444,707 (2,699)
query : 1 - 572 (572/572)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 22, E.R. 4, pero 2, golg 2, E.R._mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219874)
HIX0219874
HIT000660698 (
ENST00000546456
)
(Voltage-dependent channel, four helix bundle domain containing protein.)
genome : 75,444,847 - 75,533,976 (89,130)
query : 1 - 534 (534/534)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219874)
HIX0171602
HIT000449661_09
(
DQ583130
)
Representative transcript
(Non-protein coding transcript.)
genome : 75,614,703 - 75,614,733 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171602)
HIX0171602
HIT000449660_09
(
DQ583129
)
(Non-protein coding transcript.)
genome : 75,614,703 - 75,614,732 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171602)
HIX0010836
HIT000018060
(
AK093193
)
Representative transcript
(Conserved hypothetical protein.)
genome : 75,628,520 - 75,645,645 (17,126)
query : 1 - 1,750 (1,750/1,750)
2 exons
identity = 0.999
5'(1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto 6, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010836)
HIX0010836
HIT000662730 (
ENST00000548779
)
(Conserved hypothetical protein.)
genome : 75,628,520 - 75,645,645 (17,126)
query : 1 - 1,751 (1,751/1,751)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto 6, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010836)
HIX0010836
HIT000663755 (
ENST00000549953
)
(Hypothetical protein.)
genome : 75,628,820 - 75,688,892 (60,073)
query : 1 - 468 (468/468)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 10, cyto_nucl 8.83333, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010836)
HIX0220398
HIT000663385 (
ENST00000549521
)
(Conserved hypothetical protein.)
genome : 75,651,415 - 75,652,414 (1,000)
query : 1 - 1,000 (1,000/1,000)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, cyto_mito 11, extr 10, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220398)
HIX0201849
HIT000093253
(
BC033860
)
(Calcyphosin-2.)
genome : 75,669,759 - 75,723,805 (54,047)
query : 1 - 1,859 (1,859/1,910)
16 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.994;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
GO :
0005509 : Molecular Function : calcium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 13.8333, cyto 11.5,
cyto_plas 7.16667, cysk 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201849)
HIX0201849
HIT000210765 (
NM_032606
)
(Calcyphosin-2; Calcyphosine-2;)
genome : 75,669,759 - 75,723,836 (54,078)
query : 1 - 2,135 (2,135/2,155)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 11, extr 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201849)
HIX0201849
HIT000259568
(
BC056672
)
(Calcyphosin-2; Calcyphosine-2;)
genome : 75,669,759 - 75,711,953 (42,195)
query : 5 - 1,415 (1,411/1,435)
12 exons
identity = 0.999
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.993;1.000)5'
coverage = 0.997
InterPro :
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
GO :
0005509 : Molecular Function : calcium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 19.5, cyto 16, nucl 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201849)
HIX0201849
HIT000507477 (
ENST00000409445
)
(Calcyphosin-2; Calcyphosine-2;)
genome : 75,669,759 - 75,723,836 (54,078)
query : 1 - 2,135 (2,135/2,135)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 11, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201849)
HIX0201849
HIT000507824 (
ENST00000409799
)
(Calcyphosin-2.)
genome : 75,669,759 - 75,723,805 (54,047)
query : 1 - 1,859 (1,859/1,859)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto_nucl 13.8333, cyto 11.5,
cyto_plas 7.16667, cysk 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201849)
HIX0201849
HIT000507041 (
ENST00000409004
)
(Calcyphosin-2; Calcyphosine-2;)
genome : 75,669,759 - 75,711,953 (42,195)
query : 1 - 1,411 (1,411/1,411)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 19.5, cyto 16, nucl 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201849)
HIX0201849
HIT000016706
(
AK091839
)
Representative transcript
(Calcyphosin-2; Calcyphosine-2;)
genome : 75,669,760 - 75,723,836 (54,077)
query : 1 - 2,134 (2,134/2,134)
18 exons
identity = 0.999
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.991;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
GO :
0005509 : Molecular Function : calcium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, nucl 11, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201849)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB052179
Mus
sp. (Mouse) : AK085286
Gallus
sp. (Chicken) : CR353869
Equus
sp. (Horse) : ENSECAT00000011716
Monodelphis
sp. (Opossum) : ENSMODT00000026027
Pongo
sp. (Orangutan) : ENSPPYT00000005661
Rattus
sp. (Rat) : XM_001080856
Pan
sp. (Chimpanzee) : XM_001160117
Canis
sp. (Dog) : XM_538290
Bos
sp. (Cow) : XM_602927
Mus
sp. (Mouse) : XM_915994
HIX0201849
HIT000476742 (
ENST00000393284
)
(Calcyphosin-2.)
genome : 75,671,005 - 75,720,241 (49,237)
query : 1 - 3,416 (3,416/3,430)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 14.5, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201849)
HIX0201849
HIT000017141
(
AK092274
)
(Calcyphosin-2.)
genome : 75,671,006 - 75,710,152 (39,147)
query : 1 - 2,922 (2,922/2,922)
12 exons
identity = 1.000
3'(1.000;1.000;0.992;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
GO :
0005509 : Molecular Function : calcium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 15.6667, cyto_pero 12,
cyto_plas 10.5, nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201849)
HIX0201849
HIT000075049
(
AF251056
)
(Calcyphosin-2; Calcyphosine-2;)
genome : 75,671,009 - 75,784,702 (113,694)
query : 1 - 3,829 (3,829/3,829)
18 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.993;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
GO :
0005509 : Molecular Function : calcium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 14.5, nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201849)
HIX0201849
HIT000125702 (
ENST00000328705
)
(Calcyphosin-2; Calcyphosine-2;)
genome : 75,671,009 - 75,784,702 (113,694)
query : 1 - 3,831 (3,831/3,831)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 14.5, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201849)
HIX0201849
HIT000078222
(
AF351611
)
(Calcyphosin-2.)
genome : 75,671,009 - 75,720,241 (49,233)
query : 1 - 3,410 (3,410/3,410)
17 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.992;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
GO :
0005509 : Molecular Function : calcium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 14.5, nucl 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201849)
HIX0201849
HIT000130243 (
ENST00000336815
)
(Calcyphosin-2.)
genome : 75,671,445 - 75,784,701 (113,257)
query : 1 - 2,569 (2,569/2,569)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, extr 7, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201849)
HIX0201849
HIT000390626
(
BC131724
)
(Calcyphosin-2.)
genome : 75,671,445 - 75,784,701 (113,257)
query : 1 - 2,569 (2,569/2,569)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.994;1.000)5'
coverage = 1.000
InterPro :
IPR002048 : EF-hand domain
IPR011992 : EF-hand domain pair
GO :
0005509 : Molecular Function : calcium ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, extr 7, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201849)
HIX0201849
HIT000540273 (
ENST00000442339
)
(Calcyphosin-2.)
genome : 75,671,445 - 75,784,701 (113,257)
query : 1 - 2,569 (2,569/2,569)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, extr 7, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201849)
HIX0010836
HIT000633697 (
ENST00000534648
)
(Hypothetical short protein.)
genome : 75,688,836 - 75,692,288 (3,453)
query : 1 - 422 (422/422)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, extr 14, cyto_nucl 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010836)
HIX0201849
HIT000665979 (
ENST00000552497
)
(Calcyphosin-2.)
genome : 75,693,651 - 75,784,681 (91,031)
query : 1 - 593 (593/593)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 15.1667, cyto_plas 12.1667,
extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201849)
HIX0201849
HIT000665387 (
ENST00000551829
)
(Calcyphosin-2.)
genome : 75,698,576 - 75,784,681 (86,106)
query : 1 - 559 (559/559)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 15, nucl 6, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201849)
HIX0220271
HIT000661399 (
ENST00000547243
)
(Conserved hypothetical protein.)
genome : 75,699,232 - 75,700,137 (906)
query : 1 - 906 (906/906)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 11.5, cyto_nucl 11.5, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220271)
HIX0201849
HIT000534832 (
ENST00000436898
)
(Calcyphosin-2.)
genome : 75,706,627 - 75,784,681 (78,055)
query : 1 - 593 (593/599)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.990
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, extr 6, mito 4, nucl 3, extr_plas 3,
mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201849)
HIX0201849
HIT000589962 (
ENST00000486196
)
(Calcyphosin-2.)
genome : 75,715,237 - 75,784,688 (69,452)
query : 1 - 595 (595/595)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 14, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201849)
HIX0201849
HIT000596526 (
ENST00000493070
)
(Calcyphosin-2.)
genome : 75,716,716 - 75,723,836 (7,121)
query : 1 - 548 (548/548)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11, cyto_nucl 11, extr 10, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201849)
HIX0010832
HIT000359975 (
ENST00000378695
)
(GLIPR1-like protein 1; Precursor;)
genome : 75,728,419 - 75,764,022 (35,604)
query : 1 - 885 (885/885)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010832)
HIX0010832
HIT000252775
(
AY358731
)
Representative transcript
(GLIPR1-like protein 1; Precursor;)
genome : 75,728,419 - 75,764,019 (35,601)
query : 1 - 882 (882/882)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;0.989;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001283 : Cysteine-rich secretory protein, allergen V5/Tpx-1-related
IPR002413 : Ves allergen
IPR014044 : CAP domain
IPR018244 : Allergen V5/Tpx-1-related, conserved site
GO :
0005576 : Cellular Component : extracellular region
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010832)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK005860
Bos
sp. (Cow) : BC109660
Equus
sp. (Horse) : ENSECAT00000016314
Macaca
sp. (Macaque) : ENSMMUT00000017215
Monodelphis
sp. (Opossum) : ENSMODT00000026030
Pongo
sp. (Orangutan) : ENSPPYT00000005662
Rattus
sp. (Rat) : ENSRNOT00000039475
Pan
sp. (Chimpanzee) : XM_001160352
Gallus
sp. (Chicken) : XM_416103
Canis
sp. (Dog) : XM_847424
HIX0010832
HIT000036804
(
BC014603
)
(GLIPR1-like protein 1 precursor.)
genome : 75,728,463 - 75,764,168 (35,706)
query : 6 - 965 (960/980)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.997)3'
coverage = 0.995
InterPro :
IPR001283 : Cysteine-rich secretory protein, allergen V5/Tpx-1-related
IPR002413 : Ves allergen
IPR014044 : CAP domain
IPR018244 : Allergen V5/Tpx-1-related, conserved site
GO :
0005576 : Cellular Component : extracellular region
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto_mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010832)
HIX0010832
HIT000119383 (
ENST00000312442
)
(GLIPR1-like protein 1 precursor.)
genome : 75,728,463 - 75,764,340 (35,878)
query : 1 - 1,132 (1,132/1,132)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto_mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010832)
HIX0010832
HIT000214027 (
NM_152779
)
(GLIPR1-like protein 1 precursor.)
genome : 75,728,463 - 75,764,168 (35,706)
query : 1 - 960 (960/975)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, cyto_mito 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010832)
HIX0201849
HIT000662888 (
ENST00000548958
)
(Conserved hypothetical protein.)
genome : 75,754,112 - 75,784,690 (30,579)
query : 1 - 761 (761/761)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 11, extr 7, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201849)
HIX0201849
HIT000661467 (
ENST00000547320
)
(Hypothetical short protein.)
genome : 75,758,589 - 75,784,708 (26,120)
query : 1 - 546 (546/546)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201849)
HIX0010832
HIT000662596 (
ENST00000548623
)
(Conserved hypothetical protein.)
genome : 75,760,613 - 75,764,167 (3,555)
query : 1 - 484 (484/484)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010832)
HIX0010832
HIT000661311 (
ENST00000547144
)
(Conserved hypothetical protein.)
genome : 75,760,717 - 75,764,164 (3,448)
query : 1 - 404 (404/404)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, extr 12, cyto 2.5, cyto_nucl 2.5, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010832)
HIX0201849
HIT000662088 (
ENST00000548035
)
(Conserved hypothetical protein.)
genome : 75,767,278 - 75,784,681 (17,404)
query : 1 - 545 (545/545)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, cyto 10, nucl 9, extr 8, mito 2,
pero 2, mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201849)
HIX0022476
HIT000089051
(
BC016749
)
(GLIPR1-like protein 2;)
genome : 75,784,850 - 75,824,828 (39,979)
query : 8 - 976 (969/991)
6 exons
identity = 0.998
5'(0.993;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.993
InterPro :
IPR001283 : Cysteine-rich secretory protein, allergen V5/Tpx-1-related
IPR014044 : CAP domain
SOSUI :
MEMBRANE PROTEIN
PSORT :
pero 17, extr 8, plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022476)
HIX0022476
HIT000664611 (
ENST00000550916
)
(GLIPR1-like protein 2;)
genome : 75,784,850 - 75,826,468 (41,619)
query : 1 - 2,609 (2,609/2,609)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, pero 6, cyto 4, mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022476)
HIX0022476
HIT000724668 (
NM_001270396
)
(GLIPR1-like protein 2;)
genome : 75,784,850 - 75,826,177 (41,328)
query : 1 - 2,318 (2,318/2,318)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, pero 6, cyto 4, mito_pero 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022476)
HIX0022476
HIT000727384 (
NR_072995
)
(GLIPR1-like protein 2;)
genome : 75,784,850 - 75,826,177 (41,328)
query : 1 - 2,448 (2,448/2,448)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto_nucl 7.66667, nucl 7.5, extr 6,
E.R._mito 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022476)
HIX0022476
HIT000213705 (
NM_152436
)
(GLIPR1-like protein 2 isoform 2.)
genome : 75,784,850 - 75,817,820 (32,971)
query : 1 - 1,768 (1,768/1,784)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 4, lyso 2, cyto_pero 2, cyto_plas 2,
cyto_golg 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022476)
HIX0022476
HIT000018042
(
AK093175
)
(GLIPR1-like protein 2;)
genome : 75,784,860 - 75,825,591 (40,732)
query : 1 - 1,723 (1,723/1,723)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.963;0.999)3'
coverage = 1.000
InterPro :
IPR001283 : Cysteine-rich secretory protein, allergen V5/Tpx-1-related
IPR014044 : CAP domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 3, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022476)
HIX0022476
HIT000533709 (
ENST00000435775
)
(GLIPR1-like protein 2;)
genome : 75,784,860 - 75,825,591 (40,732)
query : 1 - 1,618 (1,618/1,618)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022476)
HIX0022476
HIT000359969 (
ENST00000378689
)
(GLIPR1-like protein 2;)
genome : 75,784,860 - 75,796,883 (12,024)
query : 1 - 358 (358/358)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 3.5, cyto_nucl 2.5, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022476)
HIX0022476
HIT000055462
(
BX640916
)
(GLIPR1-like protein 2;)
genome : 75,784,881 - 75,825,663 (40,783)
query : 1 - 1,903 (1,903/2,040)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR001283 : Cysteine-rich secretory protein, allergen V5/Tpx-1-related
IPR014044 : CAP domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 8, cyto 4, E.R._mito 4, mito_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022476)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK014846
Rattus
sp. (Rat) : BC083894
Bos
sp. (Cow) : ENSBTAT00000025642
Pongo
sp. (Orangutan) : ENSPPYT00000005663
Pan
sp. (Chimpanzee) : ENSPTRT00000009630
Macaca
sp. (Macaque) : XM_001109910
Monodelphis
sp. (Opossum) : XM_001371149
Equus
sp. (Horse) : XM_001491252
Gallus
sp. (Chicken) : XM_416103
Canis
sp. (Dog) : XM_538291
HIX0022476
HIT000359972 (
ENST00000378692
)
(GLIPR1-like protein 2;)
genome : 75,784,881 - 75,825,663 (40,783)
query : 1 - 1,903 (1,903/1,903)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 8, cyto 4, E.R._mito 4, mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022476)
HIX0022476
HIT000040820
(
BC029557
)
Representative transcript
(GLIPR1-like protein 2 isoform 2.)
genome : 75,784,889 - 75,817,820 (32,932)
query : 1 - 1,729 (1,729/1,745)
4 exons
identity = 0.999
5'(0.996;1.000;1.000;0.999)3'
coverage = 0.999
InterPro :
IPR001283 : Cysteine-rich secretory protein, allergen V5/Tpx-1-related
IPR014044 : CAP domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 4, lyso 2, cyto_pero 2, cyto_plas 2,
cyto_golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022476)
HIX0022476
HIT000122427 (
ENST00000320460
)
(GLIPR1-like protein 2 isoform 2.)
genome : 75,784,889 - 75,817,820 (32,932)
query : 1 - 1,729 (1,729/1,729)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 4, lyso 2, cyto_pero 2, cyto_plas 2,
cyto_golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022476)
HIX0022476
HIT000661326 (
ENST00000547164
)
(GLIPR1-like protein 2;)
genome : 75,784,897 - 75,816,712 (31,816)
query : 1 - 509 (509/509)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, mito 3, lyso 2, E.R._mito 2, cyto_mito 2,
mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022476)
HIX0022476
HIT000539152 (
ENST00000441218
)
(GLIPR1-like protein 2;)
genome : 75,785,310 - 75,825,655 (40,346)
query : 1 - 1,554 (1,554/1,554)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 16.5, cyto_mito 13.5, cyto 9.5, plas 3, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022476)
HIX0022476
HIT000092523
(
BC032022
)
(Hypothetical short protein.)
genome : 75,825,249 - 75,826,468 (1,220)
query : 1 - 1,220 (1,220/1,235)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 11, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022476)
HIX0201886
HIT000110039 (
ENST00000266659
)
(Glioma pathogenesis-related protein 1; GliPR 1; Protein RTVP-1; Precursor;)
genome : 75,874,460 - 75,897,633 (23,174)
query : 1 - 5,877 (5,877/5,877)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 16.5, extr_plas 11.5, plas 5.5, mito 4.5,
mito_pero 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201886)
HIX0201886
HIT000203417 (
NM_006851
)
(Glioma pathogenesis-related protein 1; GliPR 1; Protein RTVP-1; Precursor;)
genome : 75,874,513 - 75,895,716 (21,204)
query : 1 - 3,907 (3,907/3,924)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 16.5, extr_plas 11.5, plas 5.5, mito 4.5,
mito_pero 4.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201886)
HIX0201886
HIT000499471
(
AK304847
)
(Glioma pathogenesis-related protein 1; GliPR 1; Protein RTVP-1; Precursor;)
genome : 75,874,533 - 75,893,073 (18,541)
query : 1 - 1,234 (1,234/1,234)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR001283 : Cysteine-rich secretory protein, allergen V5/Tpx-1-related
IPR002413 : Ves allergen
IPR014044 : CAP domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 5, mito 3.5, mito_pero 2.5,
cyto_plas 2.5, cyto_golg 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201886)
HIX0201886
HIT000635748 (
ENST00000536703
)
(Glioma pathogenesis-related protein 1; GliPR 1; Protein RTVP-1; Precursor;)
genome : 75,874,533 - 75,893,073 (18,541)
query : 1 - 1,234 (1,234/1,234)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 5, mito 3.5, mito_pero 2.5,
cyto_plas 2.5, cyto_golg 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201886)
HIX0201886
HIT000324476
(
X91911
)
(Conserved hypothetical protein.)
genome : 75,874,534 - 75,892,891 (18,358)
query : 2 - 1,061 (1,060/1,061)
6 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;0.963;0.993)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24, cyto 6.5, cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201886)
HIX0201886
HIT000086492
(
BC005227
)
(Glioma pathogenesis-related protein 1; GliPR 1; Protein RTVP-1; Precursor;)
genome : 75,874,535 - 75,892,790 (18,256)
query : 1 - 958 (958/988)
6 exons
identity = 0.999
5'(1.000;0.996;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001283 : Cysteine-rich secretory protein, allergen V5/Tpx-1-related
IPR002413 : Ves allergen
IPR014044 : CAP domain
IPR018244 : Allergen V5/Tpx-1-related, conserved site
GO :
0005576 : Cellular Component : extracellular region
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 16.5, extr_plas 11.5, plas 5.5, mito 4.5,
mito_pero 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201886)
HIX0201886
HIT000218345
(
U16307
)
(Conserved hypothetical protein.)
genome : 75,874,578 - 75,893,479 (18,902)
query : 1 - 1,599 (1,599/1,616)
6 exons
identity = 0.977
5'(0.988;1.000;1.000;1.000;1.000;0.962)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, cyto 2.5, cyto_nucl 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201886)
HIX0201886
HIT000035847
(
BC012510
)
Representative transcript
(Glioma pathogenesis-related protein 1; GliPR 1; Protein RTVP-1; Precursor;)
genome : 75,874,597 - 75,892,790 (18,194)
query : 1 - 897 (897/907)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.995)3'
coverage = 1.000
InterPro :
IPR001283 : Cysteine-rich secretory protein, allergen V5/Tpx-1-related
IPR002413 : Ves allergen
IPR014044 : CAP domain
IPR018244 : Allergen V5/Tpx-1-related, conserved site
GO :
0005576 : Cellular Component : extracellular region
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 16.5, extr_plas 11.5, plas 5.5, mito 4.5,
mito_pero 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201886)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB173000
Rattus
sp. (Rat) : BC089858
Mus
sp. (Mouse) : BC098231
Bos
sp. (Cow) : BC102295
Danio
sp. (Zebrafish) : ENSDART00000103420
Equus
sp. (Horse) : ENSECAT00000016491
Gallus
sp. (Chicken) : ENSGALT00000016619
Monodelphis
sp. (Opossum) : ENSMODT00000026038
Pongo
sp. (Orangutan) : ENSPPYT00000005664
Takifugu
sp. (Fugu) : SINFRUT00000180114
Pan
sp. (Chimpanzee) : XM_001160556
Canis
sp. (Dog) : XM_531682
HIX0201886
HIT000079047
(
AF400440
)
(Glioma pathogenesis-related protein 1; GliPR 1; Protein RTVP-1; Precursor;)
genome : 75,874,633 - 75,892,802 (18,170)
query : 1 - 873 (873/873)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.963;1.000)3'
coverage = 1.000
InterPro :
IPR001283 : Cysteine-rich secretory protein, allergen V5/Tpx-1-related
IPR002413 : Ves allergen
IPR014044 : CAP domain
IPR018244 : Allergen V5/Tpx-1-related, conserved site
GO :
0005576 : Cellular Component : extracellular region
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 16.5, extr_plas 11.5, plas 5.5, mito 4.5,
mito_pero 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201886)
HIX0201886
HIT000432315
(
AK313449
)
(Conserved hypothetical protein.)
genome : 75,874,647 - 75,892,758 (18,112)
query : 1 - 815 (815/815)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.963;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 26, cyto 2.5, cyto_nucl 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201886)
HIX0201886
HIT000469796
(
EF667354
)
(Glioma pathogenesis-related protein 1; GliPR 1; Protein RTVP-1; Precursor;)
genome : 75,874,661 - 75,892,495 (17,835)
query : 1 - 712 (712/714)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.997
InterPro :
IPR001283 : Cysteine-rich secretory protein, allergen V5/Tpx-1-related
IPR002413 : Ves allergen
IPR014044 : CAP domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, extr 9, cyto 6.5, cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201886)
HIX0201886
HIT000554584 (
ENST00000456650
)
(Glioma pathogenesis-related protein 1; GliPR 1; Protein RTVP-1; Precursor;)
genome : 75,874,661 - 75,892,497 (17,837)
query : 1 - 714 (714/714)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15.5, extr 9, mito_pero 9, cyto 5.5,
cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201886)
HIX0201886
HIT000664230 (
ENST00000550491
)
(Conserved hypothetical protein.)
genome : 75,874,984 - 75,889,442 (14,459)
query : 1 - 667 (667/667)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, cyto_nucl 4, nucl 3.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201886)
HIX0220273
HIT000661473 (
ENST00000547326
)
(Conserved hypothetical protein.)
genome : 75,877,904 - 75,883,600 (5,697)
query : 1 - 812 (812/812)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 8, cyto 5, mito_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220273)
HIX0010834
HIT000018692
(
AK093825
)
Representative transcript
(Conserved hypothetical protein.)
genome : 75,885,885 - 75,889,064 (3,180)
query : 1 - 3,180 (3,180/3,180)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 8.5, cyto_nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010834)
HIX0010834
HIT000007427
(
AK024153
)
(Conserved hypothetical protein.)
genome : 75,885,885 - 75,887,924 (2,040)
query : 1 - 2,040 (2,040/2,040)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 8.5, cyto_nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010834)
HIX0010835
HIT000104146 (
ENST00000229214
)
(KRR1 small subunit processome component homolog; HIV-1 Rev-binding protein 2; KRR-R motif-containing protein 1; Rev-interacting protein 1; Rip-1;)
genome : 75,890,684 - 75,905,401 (14,718)
query : 1 - 4,075 (4,075/4,075)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010835)
HIX0010835
HIT000042016
(
BC033887
)
Representative transcript
(KRR1 small subunit processome component homolog; HIV-1 Rev-binding protein 2; KRR-R motif-containing protein 1; Rev-interacting protein 1; Rip-1;)
genome : 75,891,420 - 75,905,392 (13,973)
query : 1 - 3,330 (3,330/3,359)
10 exons
identity = 0.998
3'(0.998;1.000;1.000;0.988;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004087 : K Homology domain
IPR004088 : K Homology domain, type 1
IPR024166 : Ribosomal RNA assembly KRR1
GO :
0003723 : Molecular Function : RNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010835)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ720144
Mus
sp. (Mouse) : AK032472
Bos
sp. (Cow) : BC107550
Rattus
sp. (Rat) : BC128768
Canis
sp. (Dog) : ENSCAFT00000009134
Pongo
sp. (Orangutan) : ENSPPYT00000005665
Takifugu
sp. (Fugu) : SINFRUT00000159646
Monodelphis
sp. (Opossum) : XM_001371324
Equus
sp. (Horse) : XM_001488436
Pan
sp. (Chimpanzee) : XR_025480
HIX0010835
HIT000203583 (
NM_007043
)
(KRR1 small subunit processome component homolog; HIV-1 Rev-binding protein 2; KRR-R motif-containing protein 1; Rev-interacting protein 1; Rip-1;)
genome : 75,891,419 - 75,905,418 (14,000)
query : 1 - 3,357 (3,357/3,357)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15, cyto 8.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010835)
HIX0010835
HIT000040110
(
BC026107
)
(KRR1 small subunit processome component homolog; HIV-1 Rev-binding protein 2; KRR-R motif-containing protein 1; Rev-interacting protein 1; Rip-1;)
genome : 75,893,252 - 75,905,401 (12,150)
query : 1 - 1,507 (1,507/1,522)
10 exons
identity = 0.996
3'(0.994;1.000;1.000;1.000;0.982;1.000;1.000;
1.000;0.994;0.991)5'
coverage = 1.000
InterPro :
IPR004087 : K Homology domain
IPR004088 : K Homology domain, type 1
IPR024166 : Ribosomal RNA assembly KRR1
GO :
0003723 : Molecular Function : RNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010835)
HIX0010835
HIT000217388
(
U00943
)
(KRR1 small subunit processome component homolog.)
genome : 75,893,291 - 75,905,352 (12,062)
query : 3 - 1,420 (1,418/1,420)
10 exons
identity = 0.986
3'(0.971;1.000;1.000;0.988;0.982;0.988;0.976;
1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR004087 : K Homology domain
IPR004088 : K Homology domain, type 1
IPR024166 : Ribosomal RNA assembly KRR1
GO :
0003723 : Molecular Function : RNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 17, cyto 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010835)
HIX0010835
HIT000037685
(
BC016778
)
(KRR1 small subunit processome component homolog; HIV-1 Rev-binding protein 2; KRR-R motif-containing protein 1; Rev-interacting protein 1; Rip-1;)
genome : 75,893,333 - 75,905,388 (12,056)
query : 5 - 1,415 (1,411/1,444)
10 exons
identity = 0.996
3'(0.990;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994;1.000)5'
coverage = 0.996
InterPro :
IPR004087 : K Homology domain
IPR004088 : K Homology domain, type 1
IPR024166 : Ribosomal RNA assembly KRR1
GO :
0003723 : Molecular Function : RNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010835)
HIX0010835
HIT000432553
(
AK313687
)
(KRR1 small subunit processome component homolog; HIV-1 Rev-binding protein 2; KRR-R motif-containing protein 1; Rev-interacting protein 1; Rip-1;)
genome : 75,893,589 - 75,905,381 (11,793)
query : 1 - 1,150 (1,150/1,150)
10 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.994;1.000)5'
coverage = 1.000
InterPro :
IPR004087 : K Homology domain
IPR004088 : K Homology domain, type 1
IPR024166 : Ribosomal RNA assembly KRR1
GO :
0003723 : Molecular Function : RNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010835)
HIX0010835
HIT000394704
(
EF010919
)
(KRR1 small subunit processome component homolog.)
genome : 75,893,589 - 75,905,377 (11,789)
query : 1 - 975 (975/975)
9 exons
identity = 0.996
3'(0.993;1.000;1.000;1.000;1.000;0.984;1.000;
1.000;0.988)5'
coverage = 1.000
InterPro :
IPR004087 : K Homology domain
IPR004088 : K Homology domain, type 1
IPR024166 : Ribosomal RNA assembly KRR1
GO :
0003723 : Molecular Function : RNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 15.5, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010835)
HIX0010835
HIT000536103 (
ENST00000438169
)
(KRR1 small subunit processome component homolog.)
genome : 75,893,589 - 75,905,377 (11,789)
query : 1 - 975 (975/975)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 15.5, cyto 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010835)
HIX0010835
HIT000088258
(
BC014034
)
(KRR1 small subunit processome component homolog; HIV-1 Rev-binding protein 2; KRR-R motif-containing protein 1; Rev-interacting protein 1; Rip-1;)
genome : 75,893,609 - 75,905,394 (11,786)
query : 1 - 1,143 (1,143/1,161)
10 exons
identity = 0.999
3'(1.000;1.000;1.000;0.994;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004087 : K Homology domain
IPR004088 : K Homology domain, type 1
IPR024166 : Ribosomal RNA assembly KRR1
GO :
0003723 : Molecular Function : RNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010835)
HIX0010835
HIT000220429
(
U55766
)
(KRR1 small subunit processome component homolog.)
genome : 75,893,614 - 75,905,388 (11,775)
query : 2 - 1,131 (1,130/1,141)
10 exons
identity = 0.998
3'(1.000;1.000;0.987;0.994;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR004087 : K Homology domain
IPR004088 : K Homology domain, type 1
IPR024166 : Ribosomal RNA assembly KRR1
GO :
0003723 : Molecular Function : RNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 15.5, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010835)
HIX0010835
HIT000664738 (
ENST00000551070
)
(KRR1 small subunit processome component homolog.)
genome : 75,893,610 - 75,898,062 (4,453)
query : 1 - 673 (673/673)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 14, cyto 4, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010835)
HIX0010835
HIT000086490
(
BC005225
)
(KRR1 small subunit processome component homolog.)
genome : 75,893,678 - 75,905,413 (11,736)
query : 1 - 1,093 (1,093/1,124)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR004087 : K Homology domain
IPR004088 : K Homology domain, type 1
IPR024166 : Ribosomal RNA assembly KRR1
GO :
0003723 : Molecular Function : RNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 15, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010835)
HIX0010835
HIT000663816 (
ENST00000550023
)
(KRR1 small subunit processome component homolog.)
genome : 75,899,944 - 75,905,393 (5,450)
query : 1 - 855 (855/855)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 16, nucl 8.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010835)
HIX0010835
HIT000492226
(
AK297602
)
(KRR1 small subunit processome component homolog.)
genome : 75,899,944 - 75,905,381 (5,438)
query : 1 - 843 (843/843)
4 exons
identity = 0.998
3'(0.998;0.993;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR004087 : K Homology domain
IPR004088 : K Homology domain, type 1
IPR024166 : Ribosomal RNA assembly KRR1
GO :
0003723 : Molecular Function : RNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 16, nucl 8.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010835)
HIX0010835
HIT000664595 (
ENST00000550898
)
(KRR1 small subunit processome component homolog.)
genome : 75,900,300 - 75,905,416 (5,117)
query : 1 - 694 (694/694)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 12.5, cyto_nucl 8.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010835)
HIX0010835
HIT000005407
(
AK022133
)
(Conserved hypothetical protein.)
genome : 75,903,386 - 75,905,383 (1,998)
query : 1 - 1,998 (1,998/1,998)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 12, cyto 8, plas 5, pero 4, cyto_mito 4,
cyto_golg 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010835)
HIX0220089
HIT000666285 (
ENST00000552856
)
(Conserved hypothetical protein.)
genome : 75,956,982 - 76,377,795 (420,814)
query : 1 - 748 (748/748)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, extr 11, nucl 7.5, cyto_nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220089)
HIX0220328
HIT000662362 (
ENST00000548349
)
(6-phosphogluconate dehydrogenase, C-terminal domain containing protein.)
genome : 75,993,827 - 75,995,331 (1,505)
query : 1 - 1,505 (1,505/1,505)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220328)
HIX0037119
HIT000099030
(
BC048973
)
Representative transcript
(Conserved hypothetical protein.)
genome : 76,017,304 - 76,018,798 (1,495)
query : 1 - 1,495 (1,495/1,509)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, extr 10, cyto_nucl 4, nucl 3.5, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037119)
HIX0220458
HIT000664467 (
ENST00000550757
)
(Ribosomal protein L10e/L16 domain containing protein.)
genome : 76,082,574 - 76,082,876 (303)
query : 1 - 303 (303/303)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, extr 11, cyto_nucl 7.5, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220458)
HIX0210813
HIT000615487 (
ENST00000516084
)
(Hypothetical short protein.)
genome : 76,082,932 - 76,083,084 (153)
query : 1 - 153 (153/153)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210813)
HIX0220089
HIT000665795 (
ENST00000552290
)
(Conserved hypothetical protein.)
genome : 76,083,248 - 76,084,615 (1,368)
query : 1 - 461 (461/461)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 6.5, mito 5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220089)
HIX0220089
HIT000665950 (
ENST00000552466
)
(Conserved hypothetical protein.)
genome : 76,084,537 - 76,086,138 (1,602)
query : 1 - 357 (357/357)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11, cyto 9.5, extr 9, nucl 5.5, mito 4,
pero 4, mito_pero 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220089)
HIX0220345
HIT000662668 (
ENST00000548702
)
(Conserved hypothetical protein.)
genome : 76,087,790 - 76,092,596 (4,807)
query : 1 - 742 (742/742)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, mito 4, cyto_nucl 3, nucl 2.5, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220345)
HIX0220282
HIT000661613 (
ENST00000547483
)
(Conserved hypothetical protein.)
genome : 76,319,993 - 76,320,247 (255)
query : 1 - 255 (255/255)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 12, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220282)
HIX0220413
HIT000663701 (
ENST00000549888
)
(Hypothetical short protein.)
genome : 76,358,220 - 76,360,842 (2,623)
query : 1 - 358 (358/358)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220413)
HIX0037261
HIT000665699 (
ENST00000552179
)
(H/ACA ribonucleoprotein complex, subunit Nop10 family protein.)
genome : 76,358,579 - 76,358,775 (197)
query : 1 - 197 (197/197)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 12, extr 9, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037261)
HIX0037261
HIT000314762 (
ENST00000361500
)
(H/ACA ribonucleoprotein complex, subunit Nop10 family protein.)
genome : 76,358,597 - 76,358,780 (184)
query : 15 - 198 (184/198)
1 exon
identity = 0.989
5'(0.989)3'
coverage = 0.929
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, extr 4, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037261)
HIX0010830
HIT000262065
(
BC065825
)
(Hypothetical protein.)
genome : 76,419,232 - 76,420,728 (1,497)
query : 1 - 1,497 (1,497/1,540)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 19.6667, cyto 15.5, nucl 10.5,
cyto_plas 10.3333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010830)
HIX0010830
HIT000089385
(
BC017756
)
(Hypothetical protein.)
genome : 76,419,229 - 76,421,043 (1,815)
query : 1 - 1,817 (1,817/1,851)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 19.6667, cyto 15.5, nucl 10.5,
cyto_plas 10.3333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010830)
HIX0010830
HIT000009455
(
AK026181
)
(Hypothetical protein.)
genome : 76,419,227 - 76,420,862 (1,636)
query : 1 - 1,638 (1,638/1,655)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 19.6667, cyto 15.5, nucl 10.5,
cyto_plas 10.3333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010830)
HIX0010830
HIT000098544
(
BC047362
)
(Conserved hypothetical protein.)
genome : 76,419,227 - 76,421,676 (2,450)
query : 1 - 2,450 (2,450/2,464)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010830)
HIX0010830
HIT000094860
(
BC037430
)
(Conserved hypothetical protein.)
genome : 76,419,227 - 76,421,417 (2,191)
query : 11 - 2,201 (2,191/2,215)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 0.995
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010830)
HIX0010830
HIT000110042 (
ENST00000266671
)
(Pleckstrin homology-like domain family A member 1; Apoptosis-associated nuclear protein; Proline- and glutamine-rich protein; PQ-rich protein; PQR protein; Proline- and histidine-rich protein; T-cell death-associated gene 51 protein;)
genome : 76,419,227 - 76,427,702 (8,476)
query : 11 - 8,069 (8,059/8,069)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, nucl 9.5, cyto_nucl 9, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010830)
HIX0010830
HIT000203844 (
NM_007350
)
(Pleckstrin homology-like domain family A member 1; Apoptosis-associated nuclear protein; Proline- and glutamine-rich protein; PQ-rich protein; PQR protein; Proline- and histidine-rich protein; T-cell death-associated gene 51 protein;)
genome : 76,419,227 - 76,425,556 (6,330)
query : 1 - 5,913 (5,913/5,913)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, nucl 9.5, cyto_nucl 9, cyto 7.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010830)
HIX0010830
HIT000714273 (
ENST00000602540
)
(Pleckstrin homology-like domain family A member 1; Apoptosis-associated nuclear protein; Proline- and glutamine-rich protein; PQ-rich protein; PQR protein; Proline- and histidine-rich protein; T-cell death-associated gene 51 protein;)
genome : 76,419,227 - 76,425,384 (6,158)
query : 1 - 5,741 (5,741/5,741)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 12.5, extr 5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010830)
HIX0010830
HIT000095819
(
BC039558
)
(Hypothetical short protein.)
genome : 76,420,191 - 76,420,989 (799)
query : 1 - 801 (801/823)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 9.5, cyto_nucl 8.5, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010830)
HIX0010830
HIT000074361
(
AF220656
)
(Pleckstrin homology-like domain family A member 1; Apoptosis-associated nuclear protein; Proline- and glutamine-rich protein; PQ-rich protein; PQR protein; Proline- and histidine-rich protein; T-cell death-associated gene 51 protein;)
genome : 76,420,836 - 76,424,475 (3,640)
query : 1 - 3,222 (3,222/3,227)
2 exons
identity = 0.995
3'(0.995;1.000)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010830)
HIX0010830
HIT000339711
(
BC110820
)
(Pleckstrin homology-like domain family A member 1; Apoptosis-associated nuclear protein; Proline- and glutamine-rich protein; PQ-rich protein; PQR protein; Proline- and histidine-rich protein; T-cell death-associated gene 51 protein;)
genome : 76,422,301 - 76,425,358 (3,058)
query : 1 - 2,639 (2,639/2,654)
2 exons
identity = 0.998
3'(0.999;0.997)5'
coverage = 1.000
InterPro :
IPR001849 : Pleckstrin homology domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 12.5, nucl 7, mito 6, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010830)
HIX0010830
HIT000038478
(
BC018929
)
(Pleckstrin homology-like domain family A member 1; Apoptosis-associated nuclear protein; Proline- and glutamine-rich protein; PQ-rich protein; PQR protein; Proline- and histidine-rich protein; T-cell death-associated gene 51 protein;)
genome : 76,423,348 - 76,425,367 (2,020)
query : 1 - 1,599 (1,599/1,659)
2 exons
identity = 0.998
3'(0.998;0.997)5'
coverage = 1.000
InterPro :
IPR001849 : Pleckstrin homology domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 14.5, nucl 7.5, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010830)
HIX0010830
HIT000498848
(
AK304224
)
Representative transcript
(Pleckstrin homology-like domain family A member 1; Apoptosis-associated nuclear protein; Proline- and glutamine-rich protein; PQ-rich protein; PQR protein; Proline- and histidine-rich protein; T-cell death-associated gene 51 protein;)
genome : 76,423,433 - 76,425,494 (2,062)
query : 1 - 1,518 (1,518/1,518)
3 exons
identity = 0.994
3'(0.998;0.990;0.993)5'
coverage = 1.000
InterPro :
IPR001849 : Pleckstrin homology domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 11, mito 7, extr 5, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010830)
Ortholog candidate ( ->
Evola
)
Rattus
sp. (Rat) : AF192802
Bos
sp. (Cow) : BC134549
Mus
sp. (Mouse) : U44088
Macaca
sp. (Macaque) : XM_001117608
Pan
sp. (Chimpanzee) : XM_001161528
Monodelphis
sp. (Opossum) : XM_001371463
Equus
sp. (Horse) : XM_001915332
Canis
sp. (Dog) : XM_848970
HIX0010830
HIT000389017
(
BC126425
)
(Pleckstrin homology-like domain family A member 1; Apoptosis-associated nuclear protein; Proline- and glutamine-rich protein; PQ-rich protein; PQR protein; Proline- and histidine-rich protein; T-cell death-associated gene 51 protein;)
genome : 76,423,695 - 76,425,258 (1,564)
query : 1 - 1,144 (1,144/1,144)
2 exons
identity = 0.997
3'(1.000;0.997)5'
coverage = 1.000
InterPro :
IPR001849 : Pleckstrin homology domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010830)
HIX0010830
HIT000390217
(
BC130427
)
(Pleckstrin homology-like domain family A member 1; Apoptosis-associated nuclear protein; Proline- and glutamine-rich protein; PQ-rich protein; PQR protein; Proline- and histidine-rich protein; T-cell death-associated gene 51 protein;)
genome : 76,423,695 - 76,425,258 (1,564)
query : 1 - 1,144 (1,144/1,144)
2 exons
identity = 0.997
3'(1.000;0.997)5'
coverage = 1.000
InterPro :
IPR001849 : Pleckstrin homology domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010830)
HIX0010830
HIT000327517
(
Z50194
)
(Pleckstrin homology-like domain family A member 1; Apoptosis-associated nuclear protein; Proline- and glutamine-rich protein; PQ-rich protein; PQR protein; Proline- and histidine-rich protein; T-cell death-associated gene 51 protein;)
genome : 76,423,849 - 76,425,681 (1,833)
query : 1 - 1,412 (1,412/1,412)
2 exons
identity = 0.997
3'(1.000;0.997)5'
coverage = 1.000
InterPro :
IPR001849 : Pleckstrin homology domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, nucl 9.5, cyto_nucl 9, cyto 7.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010830)
HIX0220538
HIT000665863 (
ENST00000552367
)
(Conserved hypothetical protein.)
genome : 76,424,274 - 76,425,158 (885)
query : 1 - 569 (569/569)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 14, mito 14, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220538)
HIX0010830
HIT000222643
(
U92983
)
(Pleckstrin homology-like domain family A member 1; Apoptosis-associated nuclear protein; Proline- and glutamine-rich protein; PQ-rich protein; PQR protein; Proline- and histidine-rich protein; T-cell death-associated gene 51 protein;)
genome : 76,424,313 - 76,425,360 (1,048)
query : 1 - 1,049 (1,049/1,049)
1 exon
identity = 0.985
3'(0.985)5'
coverage = 1.000
InterPro :
IPR001849 : Pleckstrin homology domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, mito 3, pero 2, E.R._mito 2, cyto_mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010830)
HIX0036980
HIT000081545
(
AK074510
)
Representative transcript
(Hypothetical short protein.)
genome : 76,425,609 - 76,427,702 (2,094)
query : 1 - 2,099 (2,099/2,110)
1 exon
identity = 0.995
5'(0.995)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036980)
HIX0036980
HIT000661822 (
ENST00000547721
)
(Hypothetical short protein.)
genome : 76,426,438 - 76,427,677 (1,240)
query : 1 - 779 (779/779)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 6, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036980)
HIX0219719
HIT000005025
(
AK021751
)
(Hypothetical short protein.)
genome : 76,438,672 - 76,440,037 (1,366)
query : 1 - 1,366 (1,366/1,366)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 9, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219719)
HIX0219719
HIT000066959
(
AF086080
)
Representative transcript
(Conserved hypothetical protein.)
genome : 76,439,959 - 76,440,690 (732)
query : 1 - 732 (732/741)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 13.5, cyto_plas 12.8333, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219719)
HIX0010831
HIT000493560
(
AK298936
)
(Nucleosome assembly protein 1-like 1; NAP-1-related protein; hNRP; Precursor;)
genome : 76,441,144 - 76,478,465 (37,322)
query : 1 - 995 (995/995)
9 exons
identity = 0.998
3'(1.000;1.000;1.000;0.978;1.000;1.000;1.000;
0.973;1.000)5'
coverage = 1.000
InterPro :
IPR002164 : Nucleosome assembly protein (NAP)
GO :
0005634 : Cellular Component : nucleus
0006334 : Biological Process : nucleosome assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, nucl 7, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010831)
HIX0010831
HIT000037206
(
BC015599
)
Representative transcript
(Nucleosome assembly protein 1-like 1; NAP-1-related protein; hNRP; Precursor;)
genome : 76,441,169 - 76,478,464 (37,296)
query : 51 - 1,878 (1,828/1,897)
16 exons
identity = 0.956
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.992;1.000;0.993;1.000;1.000;
1.000;0.715)5'
coverage = 0.976
InterPro :
IPR002164 : Nucleosome assembly protein (NAP)
GO :
0005634 : Cellular Component : nucleus
0006334 : Biological Process : nucleosome assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, nucl 16.5, cyto 14.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010831)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB169620
Rattus
sp. (Rat) : AF062594
Mus
sp. (Mouse) : AK004633
Danio
sp. (Zebrafish) : BC044152
Bos
sp. (Cow) : BC146131
Tetraodon
sp. (Tetraodon) : CR701398
Pongo
sp. (Orangutan) : CR861317
Monodelphis
sp. (Opossum) : ENSMODT00000026050
Oryzias
sp. (Medaka) : ENSORLT00000015212
Takifugu
sp. (Fugu) : SINFRUT00000148528
Takifugu
sp. (Fugu) : SINFRUT00000152184
Equus
sp. (Horse) : XM_001914756
Pan
sp. (Chimpanzee) : XM_509226
Canis
sp. (Dog) : XM_859537
HIX0010831
HIT000030852
(
BC002387
)
(Nucleosome assembly protein 1-like 1; NAP-1-related protein; hNRP; Precursor;)
genome : 76,441,223 - 76,478,447 (37,225)
query : 1 - 2,283 (2,283/2,300)
15 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.992;1.000;0.993;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR002164 : Nucleosome assembly protein (NAP)
GO :
0005634 : Cellular Component : nucleus
0006334 : Biological Process : nucleosome assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.8333, nucl 14.5, cyto 14, cyto_mito 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010831)
HIX0010831
HIT000196638
(
M86667
)
(Nucleosome assembly protein 1-like 1; NAP-1-related protein; hNRP; Precursor;)
genome : 76,441,226 - 76,478,401 (37,176)
query : 1 - 1,560 (1,560/1,560)
16 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.992;1.000;0.993;1.000;1.000;
1.000;0.964)5'
coverage = 1.000
InterPro :
IPR002164 : Nucleosome assembly protein (NAP)
GO :
0005634 : Cellular Component : nucleus
0006334 : Biological Process : nucleosome assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.8333, nucl 14.5, cyto 14, cyto_mito 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010831)
HIX0010831
HIT000042543
(
AK122670
)
(Nucleosome assembly protein 1-like 1; NAP-1-related protein; hNRP; Precursor;)
genome : 76,441,375 - 76,478,465 (37,091)
query : 1 - 2,033 (2,033/2,033)
13 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.992;0.993;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002164 : Nucleosome assembly protein (NAP)
GO :
0005634 : Cellular Component : nucleus
0006334 : Biological Process : nucleosome assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 15, nucl 9.5, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010831)
HIX0010831
HIT000529813 (
ENST00000431879
)
(Nucleosome assembly protein 1-like 1; NAP-1-related protein; hNRP; Precursor;)
genome : 76,441,375 - 76,478,465 (37,091)
query : 1 - 2,031 (2,031/2,031)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 15, nucl 9.5, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010831)
HIX0010831
HIT000665672 (
ENST00000552147
)
(Nucleosome assembly protein 1-like 1; NAP-1-related protein; hNRP; Precursor;)
genome : 76,441,376 - 76,461,242 (19,867)
query : 1 - 1,009 (1,009/1,009)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 20.1667, cyto 16.5, nucl 12.5,
cyto_plas 10.6667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010831)
HIX0010831
HIT000661867 (
ENST00000547773
)
(Nucleosome assembly protein 1-like 1; NAP-1-related protein; hNRP; Precursor;)
genome : 76,441,412 - 76,478,509 (37,098)
query : 1 - 1,967 (1,967/1,967)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, cyto 8.5, cyto_nucl 6, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010831)
HIX0010831
HIT000665554 (
ENST00000552013
)
(Conserved hypothetical protein.)
genome : 76,441,414 - 76,443,501 (2,088)
query : 1 - 679 (679/679)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 11.5, cyto_nucl 7.5, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010831)
HIX0010831
HIT000435274
(
BC141946
)
(Conserved hypothetical protein.)
genome : 76,441,477 - 76,443,032 (1,556)
query : 22 - 842 (821/842)
2 exons
identity = 0.998
3'(0.999;0.981)5'
coverage = 0.975
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010831)
HIX0010831
HIT000067565
(
AF088017
)
(Non-protein coding transcript.)
genome : 76,441,483 - 76,441,882 (400)
query : 10 - 409 (400/415)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 0.985
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010831)
HIX0010831
HIT000492124
(
AK297500
)
(Nucleosome assembly protein 1-like 1; NAP-1-related protein; hNRP; Precursor;)
genome : 76,441,747 - 76,478,511 (36,765)
query : 1 - 1,596 (1,596/1,596)
12 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002164 : Nucleosome assembly protein (NAP)
GO :
0005634 : Cellular Component : nucleus
0006334 : Biological Process : nucleosome assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 13.5, nucl 8.5, plas 2, extr 2,
pero 2, extr_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010831)
HIX0010831
HIT000643861 (
ENST00000544816
)
(Nucleosome assembly protein 1-like 1; NAP-1-related protein; hNRP; Precursor;)
genome : 76,441,747 - 76,478,511 (36,765)
query : 1 - 1,597 (1,597/1,597)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 13.5, nucl 8.5, plas 2, extr 2,
pero 2, extr_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010831)
HIX0010831
HIT000499411
(
AK304787
)
(Nucleosome assembly protein 1-like 1; NAP-1-related protein; hNRP; Precursor;)
genome : 76,441,810 - 76,478,515 (36,706)
query : 1 - 1,675 (1,675/1,675)
14 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.992;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002164 : Nucleosome assembly protein (NAP)
GO :
0005634 : Cellular Component : nucleus
0006334 : Biological Process : nucleosome assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 15, nucl 8.5, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010831)
HIX0010831
HIT000641389 (
ENST00000542344
)
(Nucleosome assembly protein 1-like 1; NAP-1-related protein; hNRP; Precursor;)
genome : 76,441,810 - 76,478,515 (36,706)
query : 1 - 1,675 (1,675/1,675)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 15, nucl 8.5, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010831)
HIX0010831
HIT000099943
(
BT007023
)
(Nucleosome assembly protein 1-like 1; NAP-1-related protein; hNRP; Precursor;)
genome : 76,442,211 - 76,462,784 (20,574)
query : 7 - 1,174 (1,168/1,176)
13 exons
identity = 0.995
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.992;1.000;0.993;1.000;0.959)5'
coverage = 0.993
InterPro :
IPR002164 : Nucleosome assembly protein (NAP)
GO :
0005634 : Cellular Component : nucleus
0006334 : Biological Process : nucleosome assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.8333, nucl 14.5, cyto 14, cyto_mito 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010831)
HIX0010831
HIT000634065 (
ENST00000535020
)
(Nucleosome assembly protein 1-like 1; NAP-1-related protein; hNRP; Precursor;)
genome : 76,442,775 - 76,478,392 (35,618)
query : 1 - 1,686 (1,686/1,686)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.8333, nucl 14.5, cyto 14, cyto_mito 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010831)
HIX0010831
HIT000663453 (
ENST00000549596
)
(Nucleosome assembly protein 1-like 1; NAP-1-related protein; hNRP; Precursor;)
genome : 76,442,926 - 76,478,465 (35,540)
query : 1 - 1,838 (1,838/1,838)
13 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.3333, cyto 15, nucl 14.5, cyto_mito 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010831)
HIX0010831
HIT000489771
(
AK295147
)
(Nucleosome assembly protein 1-like 1; NAP-1-related protein; hNRP; Precursor;)
genome : 76,443,056 - 76,478,392 (35,337)
query : 1 - 1,405 (1,405/1,405)
14 exons
identity = 0.998
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.992;0.988;0.993;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR002164 : Nucleosome assembly protein (NAP)
GO :
0005634 : Cellular Component : nucleus
0006334 : Biological Process : nucleosome assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.8333, nucl 14.5, cyto 14, cyto_mito 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010831)
HIX0010831
HIT000089625
(
BC018565
)
(Nucleosome assembly protein 1-like 1; NAP-1-related protein; hNRP; Precursor;)
genome : 76,443,214 - 76,451,665 (8,452)
query : 1 - 2,477 (2,477/2,493)
8 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.999)5'
coverage = 1.000
InterPro :
IPR002164 : Nucleosome assembly protein (NAP)
GO :
0005634 : Cellular Component : nucleus
0006334 : Biological Process : nucleosome assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, nucl 6, plas 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010831)
HIX0010831
HIT000662052 (
ENST00000547993
)
(Nucleosome assembly protein 1-like 1; NAP-1-related protein; hNRP; Precursor;)
genome : 76,443,209 - 76,451,665 (8,457)
query : 1 - 2,481 (2,481/2,481)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, nucl 6, plas 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010831)
HIX0010831
HIT000662035 (
ENST00000547969
)
(Nucleosome assembly protein 1-like 1; NAP-1-related protein; hNRP; Precursor;)
genome : 76,443,214 - 76,446,938 (3,725)
query : 1 - 543 (543/543)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010831)
HIX0010831
HIT000665840 (
ENST00000552342
)
(Nucleosome assembly protein 1-like 1; NAP-1-related protein; hNRP; Precursor;)
genome : 76,443,245 - 76,478,439 (35,195)
query : 1 - 1,526 (1,526/1,526)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.8333, nucl 14.5, cyto 14, cyto_mito 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010831)
HIX0010831
HIT000661653 (
ENST00000547529
)
(Nucleosome assembly protein 1-like 1; NAP-1-related protein; hNRP; Precursor;)
genome : 76,443,342 - 76,461,174 (17,833)
query : 1 - 892 (892/892)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto 11.5, cyto_nucl 9, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010831)
HIX0010831
HIT000662094 (
ENST00000548044
)
(Nucleosome assembly protein 1-like 1; NAP-1-related protein; hNRP; Precursor;)
genome : 76,443,369 - 76,478,446 (35,078)
query : 1 - 1,339 (1,339/1,339)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 15, nucl 8.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010831)
HIX0010831
HIT000664624 (
ENST00000550934
)
(Nucleosome assembly protein 1-like 1; NAP-1-related protein; hNRP; Precursor;)
genome : 76,447,547 - 76,478,465 (30,919)
query : 1 - 831 (831/851)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.976
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 15, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010831)
HIX0010831
HIT000665534 (
ENST00000551992
)
(Nucleosome assembly protein 1-like 1; NAP-1-related protein; hNRP; Precursor;)
genome : 76,447,547 - 76,477,874 (30,328)
query : 1 - 1,055 (1,055/1,074)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.982
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 15.5, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010831)
HIX0010831
HIT000662299 (
ENST00000548273
)
(Nucleosome assembly protein 1-like 1; NAP-1-related protein; hNRP; Precursor;)
genome : 76,447,568 - 76,478,515 (30,948)
query : 1 - 818 (818/818)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 14.5, nucl 5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010831)
HIX0010831
HIT000665191 (
ENST00000551600
)
(Nucleosome assembly protein 1-like 1; NAP-1-related protein; hNRP; Precursor;)
genome : 76,448,800 - 76,478,465 (29,666)
query : 1 - 786 (786/786)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 13.5, nucl 7.5, extr 3, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010831)
HIX0010831
HIT000661809 (
ENST00000547704
)
(Nucleosome assembly protein 1-like 1; NAP-1-related protein; hNRP; Precursor;)
genome : 76,448,828 - 76,478,464 (29,637)
query : 1 - 760 (760/760)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 15, nucl 5.5, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010831)
HIX0010831
HIT000665125 (
ENST00000551524
)
(Nucleosome assembly protein 1-like 1; NAP-1-related protein; hNRP; Precursor;)
genome : 76,449,905 - 76,461,350 (11,446)
query : 1 - 460 (460/460)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 12.5, nucl 4, pero 4, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010831)
HIX0220545
HIT000665961 (
ENST00000552477
)
(Conserved hypothetical protein.)
genome : 76,451,318 - 76,451,895 (578)
query : 1 - 578 (578/578)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 10, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220545)
HIX0010831
HIT000663784 (
ENST00000549988
)
(Nucleosome assembly protein 1-like 1; NAP-1-related protein; hNRP; Precursor;)
genome : 76,453,376 - 76,478,465 (25,090)
query : 1 - 544 (544/544)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 24.5, cyto_mito 14, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010831)
HIX0010831
HIT000661609 (
ENST00000547479
)
(Nucleosome assembly protein 1-like 1; NAP-1-related protein; hNRP; Precursor;)
genome : 76,453,601 - 76,478,465 (24,865)
query : 1 - 623 (623/623)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 12.5, nucl 5.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010831)
HIX0010831
HIT000663347 (
ENST00000549479
)
(Nucleosome assembly protein 1-like 1; NAP-1-related protein; hNRP; Precursor;)
genome : 76,462,358 - 76,478,465 (16,108)
query : 1 - 573 (573/573)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 13, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010831)
HIX0010831
HIT000665106 (
ENST00000551500
)
(Hypothetical short protein.)
genome : 76,467,585 - 76,478,463 (10,879)
query : 1 - 552 (552/552)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010831)
HIX0010831
HIT000101259
(
D28430
)
(Non-protein coding transcript.)
genome : 76,467,994 - 76,478,465 (10,472)
query : 1 - 145 (145/145)
2 exons
identity = 0.986
3'(1.000;0.983)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010831)
HIX0220568
HIT000666282 (
ENST00000552852
)
(Ubiquitin-related domain containing protein.)
genome : 76,509,491 - 76,509,880 (390)
query : 1 - 390 (390/390)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 10.5, cyto 9, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220568)
HIX0220577
HIT000666435 (
ENST00000553021
)
(Alcohol dehydrogenase, C-terminal domain containing protein.)
genome : 76,531,205 - 76,532,390 (1,186)
query : 1 - 1,186 (1,186/1,186)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11, nucl 10, cyto 8, extr 7, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220577)
HIX0010837
HIT000329869
(
AB209994
)
(Potassium voltage-gated channel subfamily C member 2; Voltage-gated potassium channel Kv3.2;)
genome : 75,433,858 - 75,603,227 (169,370)
query : 1 - 5,205 (5,205/5,223)
5 exons
identity = 0.999
3'(0.999;1.000;0.999;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000210 : BTB/POZ-like
IPR003091 : Potassium channel
IPR003131 : Potassium channel tetramerisation-type BTB domain
IPR003968 : Potassium channel, voltage dependent, Kv
IPR003974 : Potassium channel, voltage dependent, Kv3
IPR005821 : Ion transport domain
IPR011333 : BTB/POZ fold
IPR027359 : Voltage-dependent channel, four helix bundle domain
IPR028325 : Voltage-gated potassium channel
GO :
0005216 : Molecular Function : ion channel activity
0005249 : Molecular Function : voltage-gated potassium channel activity
0005515 : Molecular Function : protein binding
0006811 : Biological Process : ion transport
0006813 : Biological Process : potassium ion transport
0008076 : Cellular Component : voltage-gated potassium channel complex
0016020 : Cellular Component : membrane
0051260 : Biological Process : protein homooligomerization
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010837)
HIX0010837
HIT000212691 (
NM_139136
)
(Potassium voltage-gated channel subfamily C member 2; Voltage-gated potassium channel Kv3.2;)
genome : 75,433,858 - 75,603,528 (169,671)
query : 1 - 3,565 (3,565/3,572)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010837)
HIX0010837
HIT000212692 (
NM_139137
)
(Potassium voltage-gated channel subfamily C member 2; Voltage-gated potassium channel Kv3.2;)
genome : 75,433,858 - 75,603,528 (169,671)
query : 1 - 5,505 (5,505/5,512)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010837)
HIX0010837
HIT000214448 (
NM_153748
)
(Potassium voltage-gated channel subfamily C member 2; Voltage-gated potassium channel Kv3.2;)
genome : 75,433,858 - 75,603,528 (169,671)
query : 1 - 3,400 (3,400/3,407)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010837)
HIX0010837
HIT000724334 (
NM_001260497
)
(Potassium voltage-gated channel subfamily C member 2 isoform 4.)
genome : 75,433,858 - 75,603,528 (169,671)
query : 1 - 6,077 (6,077/6,084)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010837)
HIX0010837
HIT000724335 (
NM_001260498
)
(Potassium voltage-gated channel subfamily C member 2; Voltage-gated potassium channel Kv3.2;)
genome : 75,433,858 - 75,603,528 (169,671)
query : 1 - 3,470 (3,470/3,477)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010837)
HIX0010837
HIT000724336 (
NM_001260499
)
(Potassium voltage-gated channel subfamily C member 2; Voltage-gated potassium channel Kv3.2;)
genome : 75,433,858 - 75,603,528 (169,671)
query : 1 - 5,340 (5,340/5,347)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010837)
HIX0010837
HIT000075744
(
AF268897
)
(Potassium voltage-gated channel subfamily C member 2; Voltage-gated potassium channel Kv3.2;)
genome : 75,433,857 - 75,601,784 (167,928)
query : 1 - 3,028 (3,028/3,028)
5 exons
identity = 0.999
3'(0.997;0.990;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000210 : BTB/POZ-like
IPR003091 : Potassium channel
IPR003131 : Potassium channel tetramerisation-type BTB domain
IPR003968 : Potassium channel, voltage dependent, Kv
IPR003974 : Potassium channel, voltage dependent, Kv3
IPR005821 : Ion transport domain
IPR011333 : BTB/POZ fold
IPR027359 : Voltage-dependent channel, four helix bundle domain
IPR028325 : Voltage-gated potassium channel
GO :
0005216 : Molecular Function : ion channel activity
0005249 : Molecular Function : voltage-gated potassium channel activity
0005515 : Molecular Function : protein binding
0006811 : Biological Process : ion transport
0006813 : Biological Process : potassium ion transport
0008076 : Cellular Component : voltage-gated potassium channel complex
0016020 : Cellular Component : membrane
0051260 : Biological Process : protein homooligomerization
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010837)
HIX0010837
HIT000085469
(
AY243473
)
(Potassium voltage-gated channel subfamily C member 2; Voltage-gated potassium channel Kv3.2;)
genome : 75,433,857 - 75,601,784 (167,928)
query : 1 - 2,932 (2,932/2,932)
4 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000210 : BTB/POZ-like
IPR003091 : Potassium channel
IPR003131 : Potassium channel tetramerisation-type BTB domain
IPR003968 : Potassium channel, voltage dependent, Kv
IPR003974 : Potassium channel, voltage dependent, Kv3
IPR005821 : Ion transport domain
IPR011333 : BTB/POZ fold
IPR027359 : Voltage-dependent channel, four helix bundle domain
IPR028325 : Voltage-gated potassium channel
GO :
0005216 : Molecular Function : ion channel activity
0005249 : Molecular Function : voltage-gated potassium channel activity
0005515 : Molecular Function : protein binding
0006811 : Biological Process : ion transport
0006813 : Biological Process : potassium ion transport
0008076 : Cellular Component : voltage-gated potassium channel complex
0016020 : Cellular Component : membrane
0051260 : Biological Process : protein homooligomerization
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010837)
HIX0010837
HIT000662500 (
ENST00000548513
)
(Potassium voltage-gated channel subfamily C member 2; Voltage-gated potassium channel Kv3.2;)
genome : 75,433,857 - 75,601,784 (167,928)
query : 1 - 3,026 (3,026/3,026)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010837)
HIX0010837
HIT000664179 (
ENST00000550433
)
(Potassium voltage-gated channel subfamily C member 2; Voltage-gated potassium channel Kv3.2;)
genome : 75,433,857 - 75,601,784 (167,928)
query : 1 - 2,931 (2,931/2,931)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010837)
HIX0010837
HIT000663319 (
ENST00000549446
)
(Potassium voltage-gated channel subfamily C member 2; Voltage-gated potassium channel Kv3.2;)
genome : 75,433,858 - 75,603,648 (169,791)
query : 1 - 5,625 (5,625/5,625)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010837)
HIX0010837
HIT000115234 (
ENST00000298972
)
(Potassium voltage-gated channel subfamily C member 2; Voltage-gated potassium channel Kv3.2;)
genome : 75,433,896 - 75,603,511 (169,616)
query : 1 - 3,510 (3,510/3,510)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010837)
HIX0010837
HIT000134299 (
ENST00000341669
)
(Potassium voltage-gated channel subfamily C member 2; Voltage-gated potassium channel Kv3.2;)
genome : 75,433,896 - 75,603,511 (169,616)
query : 1 - 3,415 (3,415/3,415)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010837)
HIX0010837
HIT000019575
(
AK094720
)
Representative transcript
(Potassium voltage-gated channel subfamily C member 2; Voltage-gated potassium channel Kv3.2;)
genome : 75,433,897 - 75,603,511 (169,615)
query : 1 - 3,344 (3,344/3,344)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;0.998)5'
coverage = 1.000
InterPro :
IPR000210 : BTB/POZ-like
IPR003091 : Potassium channel
IPR003131 : Potassium channel tetramerisation-type BTB domain
IPR003968 : Potassium channel, voltage dependent, Kv
IPR003974 : Potassium channel, voltage dependent, Kv3
IPR005821 : Ion transport domain
IPR011333 : BTB/POZ fold
IPR027359 : Voltage-dependent channel, four helix bundle domain
IPR028325 : Voltage-gated potassium channel
GO :
0005216 : Molecular Function : ion channel activity
0005249 : Molecular Function : voltage-gated potassium channel activity
0005515 : Molecular Function : protein binding
0006811 : Biological Process : ion transport
0006813 : Biological Process : potassium ion transport
0008076 : Cellular Component : voltage-gated potassium channel complex
0016020 : Cellular Component : membrane
0051260 : Biological Process : protein homooligomerization
0055085 : Biological Process : transmembrane transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010837)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC116289
Macaca
sp. (Macaque) : DQ190546
Danio
sp. (Zebrafish) : ENSDART00000103356
Equus
sp. (Horse) : ENSECAT00000010530
Pongo
sp. (Orangutan) : ENSPPYT00000005659
Pan
sp. (Chimpanzee) : ENSPTRT00000009623
Takifugu
sp. (Fugu) : SINFRUT00000132875
Rattus
sp. (Rat) : X62839
Gallus
sp. (Chicken) : XM_001235254
Monodelphis
sp. (Opossum) : XM_001363374
Canis
sp. (Dog) : XM_538289
Bos
sp. (Cow) : XM_590276
HIX0010837
HIT000307914 (
ENST00000350228
)
(Potassium voltage-gated channel subfamily C member 2; Voltage-gated potassium channel Kv3.2;)
genome : 75,433,897 - 75,603,511 (169,615)
query : 1 - 3,344 (3,344/3,344)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010837)
HIX0220670
HIT000107860 (
ENST00000261182
)
(Nucleosome assembly protein (NAP) family protein.)
genome : 76,438,670 - 76,478,813 (40,144)
query : 1 - 5,202 (5,202/5,202)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.8333, nucl 14.5, cyto 14, cyto_mito 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220670)
HIX0220670
HIT000201281 (
NM_004537
)
(Nucleosome assembly protein (NAP) family protein.)
genome : 76,438,672 - 76,478,738 (40,067)
query : 1 - 5,125 (5,125/5,125)
15 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.8333, nucl 14.5, cyto 14, cyto_mito 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220670)
HIX0220670
HIT000212723 (
NM_139207
)
(Nucleosome assembly protein (NAP) family protein.)
genome : 76,438,672 - 76,478,738 (40,067)
query : 1 - 4,451 (4,451/4,451)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.8333, nucl 14.5, cyto 14, cyto_mito 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220670)
HIX0220670
HIT000026238
(
AL162068
)
Representative transcript
(Nucleosome assembly protein (NAP) family protein.)
genome : 76,439,959 - 76,478,450 (38,492)
query : 1 - 3,552 (3,552/3,585)
15 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.992;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR002164 : Nucleosome assembly protein (NAP)
GO :
0005634 : Cellular Component : nucleus
0006334 : Biological Process : nucleosome assembly
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.8333, nucl 14.5, cyto 14, cyto_mito 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220670)
HIX0220670
HIT000076639
(
AF300335
)
(Conserved hypothetical protein.)
genome : 76,439,959 - 76,441,023 (1,065)
query : 1 - 1,065 (1,065/1,083)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 13.5, cyto_plas 12.8333, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220670)
HIX0220670
HIT000665593 (
ENST00000552056
)
(Nucleosome assembly protein (NAP) family protein.)
genome : 76,440,684 - 76,462,773 (22,090)
query : 1 - 1,981 (1,981/1,981)
14 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 16.3333, cyto 15,
cyto_mito 8.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220670)
HIX0220670
HIT000476721 (
ENST00000393263
)
(Nucleosome assembly protein (NAP) family protein.)
genome : 76,440,935 - 76,478,446 (37,512)
query : 1 - 1,896 (1,896/1,896)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.8333, nucl 14.5, cyto 14, cyto_mito 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220670)
AC025257.22
75000001-75049273 F +
NCBI
AC123904.5
75049274-75172692 F -
NCBI
AC125629.1
75172693-75310481 F -
NCBI
AC121762.7
75310482-75314732 F +
NCBI
AC073525.25
75314733-75455203 F -
NCBI
AC130405.3
75455204-75495270 F +
NCBI
AC091534.7
75495271-75678799 F +
NCBI
AC092552.10
75678800-75725633 F -
NCBI
AC121761.4
75725634-75894546 F +
NCBI
AC022507.26
75894547-76047496 F +
NCBI
AC078820.28
76047497-76090954 F -
NCBI
AC137633.2
76090955-76112186 F +
NCBI
AC131012.3
76112187-76131560 F -
NCBI
AC078923.12
76131561-76282361 F -
NCBI
AC078984.23
76282362-76306925 F +
NCBI
AC011611.26
76306926-76484010 F +
NCBI
AC233290.2
76484011-76600000 F -
NCBI