bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0010575
HIT000209310 (
NM_024604
)
(RNA polymerase II-associated protein 3;)
genome : 48,055,715 - 48,099,844 (44,130)
query : 1 - 3,687 (3,687/3,687)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 16.5, cyto 12.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010575)
HIX0010575
HIT000561580 (
NM_001146075
)
(RNA polymerase II-associated protein 3;)
genome : 48,055,715 - 48,099,844 (44,130)
query : 1 - 3,585 (3,585/3,585)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 16.5, cyto 12.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010575)
HIX0010575
HIT000561581 (
NM_001146076
)
(RNA polymerase II-associated protein 3 isoform 3.)
genome : 48,055,715 - 48,099,844 (44,130)
query : 1 - 3,528 (3,528/3,528)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, mito 7, nucl 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010575)
HIX0010575
HIT000054167
(
BC056415
)
(RNA polymerase II-associated protein 3;)
genome : 48,057,076 - 48,099,769 (42,694)
query : 1 - 2,149 (2,149/2,181)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001440 : Tetratricopeptide TPR1
IPR011990 : Tetratricopeptide-like helical domain
IPR013026 : Tetratricopeptide repeat-containing domain
IPR019734 : Tetratricopeptide repeat
IPR025986 : RNA-polymerase II-associated protein 3-like, C-terminal domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 16.5, cyto 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010575)
HIX0010575
HIT000008835
(
AK025561
)
(RNA polymerase II-associated protein 3;)
genome : 48,057,074 - 48,099,774 (42,701)
query : 1 - 2,258 (2,258/2,279)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;0.996;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001440 : Tetratricopeptide TPR1
IPR011990 : Tetratricopeptide-like helical domain
IPR013026 : Tetratricopeptide repeat-containing domain
IPR019734 : Tetratricopeptide repeat
IPR025986 : RNA-polymerase II-associated protein 3-like, C-terminal domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 16.5, cyto 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010575)
HIX0010575
HIT000102139 (
ENST00000005386
)
(RNA polymerase II-associated protein 3;)
genome : 48,057,070 - 48,099,844 (42,775)
query : 1 - 2,332 (2,332/2,332)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 16.5, cyto 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010575)
HIX0010575
HIT000662241 (
ENST00000548211
)
(RNA polymerase II-associated protein 3;)
genome : 48,057,073 - 48,058,626 (1,554)
query : 1 - 555 (555/555)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, cyto 12.5, nucl 9.5, extr 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010575)
HIX0010575
HIT000494089
(
AK299465
)
Representative transcript
(RNA polymerase II-associated protein 3 isoform 3.)
genome : 48,057,075 - 48,099,809 (42,735)
query : 1 - 2,133 (2,133/2,133)
16 exons
identity = 1.000
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001440 : Tetratricopeptide TPR1
IPR011990 : Tetratricopeptide-like helical domain
IPR013026 : Tetratricopeptide repeat-containing domain
IPR019734 : Tetratricopeptide repeat
IPR025986 : RNA-polymerase II-associated protein 3-like, C-terminal domain
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, mito 7, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010575)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ720031
Mus
sp. (Mouse) : BC004046
Rattus
sp. (Rat) : BC079414
Bos
sp. (Cow) : ENSBTAT00000024878
Monodelphis
sp. (Opossum) : ENSMODT00000012382
Oryzias
sp. (Medaka) : ENSORLT00000011384
Pongo
sp. (Orangutan) : ENSPPYT00000005268
Tetraodon
sp. (Tetraodon) : GSTENT00013271001
Takifugu
sp. (Fugu) : SINFRUT00000171425
Macaca
sp. (Macaque) : XM_001097194
Equus
sp. (Horse) : XM_001489730
Pan
sp. (Chimpanzee) : XM_509021
Canis
sp. (Dog) : XM_846432
HIX0010575
HIT000530518 (
ENST00000432584
)
(RNA polymerase II-associated protein 3 isoform 3.)
genome : 48,057,075 - 48,099,809 (42,735)
query : 1 - 2,133 (2,133/2,133)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, mito 7, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010575)
HIX0010575
HIT000361928 (
ENST00000380650
)
(RNA polymerase II-associated protein 3;)
genome : 48,057,076 - 48,099,769 (42,694)
query : 1 - 2,149 (2,149/2,149)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 16.5, cyto 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010575)
HIX0010575
HIT000662316 (
ENST00000548296
)
(TPR repeat-containing protein associated with Hsp90;)
genome : 48,089,725 - 48,091,484 (1,760)
query : 1 - 567 (567/567)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, extr 6, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010575)
HIX0010575
HIT000661810 (
ENST00000547706
)
(RNA polymerase II-associated protein 3;)
genome : 48,093,798 - 48,096,599 (2,802)
query : 1 - 420 (420/420)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 13.5, cyto 10.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010575)
HIX0010575
HIT000664933 (
ENST00000551293
)
(RNA polymerase II-associated protein 3;)
genome : 48,094,974 - 48,099,782 (4,809)
query : 1 - 621 (621/621)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 16.5, cyto 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010575)
HIX0010575
HIT000086273
(
BC003680
)
(RNA polymerase II-associated protein 3;)
genome : 48,096,471 - 48,099,817 (3,347)
query : 1 - 242 (242/287)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.934
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 16, cyto 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010575)
HIX0010578
HIT000661888 (
ENST00000547799
)
(Rap guanine nucleotide exchange factor 3 isoform b.)
genome : 48,099,868 - 48,136,077 (36,210)
query : 1 - 3,299 (3,299/3,299)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 9, cyto_nucl 7, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010578)
HIX0036755
HIT000202659 (
NM_006025
)
(Poly(U)-specific endoribonuclease; EC=3.1.-.-; Placental protein 11; PP11; Protein endoU; Uridylate-specific endoribonuclease; Precursor;)
genome : 48,103,519 - 48,119,355 (15,837)
query : 1 - 2,335 (2,335/2,351)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036755)
HIX0036755
HIT000654921 (
NM_001172439
)
(Poly(U)-specific endoribonuclease; EC=3.1.-.-; Placental protein 11; PP11; Protein endoU; Uridylate-specific endoribonuclease; Precursor;)
genome : 48,103,519 - 48,119,355 (15,837)
query : 1 - 2,458 (2,458/2,474)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036755)
HIX0036755
HIT000654922 (
NM_001172440
)
(Poly(U)-specific endoribonuclease isoform 3 precursor.)
genome : 48,103,519 - 48,119,355 (15,837)
query : 1 - 2,269 (2,269/2,285)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036755)
HIX0036755
HIT000104134 (
ENST00000229003
)
(Poly(U)-specific endoribonuclease; EC=3.1.-.-; Placental protein 11; PP11; Protein endoU; Uridylate-specific endoribonuclease; Precursor;)
genome : 48,103,517 - 48,119,350 (15,834)
query : 1 - 2,332 (2,332/2,332)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036755)
HIX0036755
HIT000195475
(
M32402
)
(Poly(U)-specific endoribonuclease; EC=3.1.-.-; Placental protein 11; PP11; Protein endoU; Uridylate-specific endoribonuclease; Precursor;)
genome : 48,103,528 - 48,119,350 (15,823)
query : 1 - 2,320 (2,320/2,320)
9 exons
identity = 0.998
3'(0.997;1.000;1.000;0.991;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.-.-
InterPro :
IPR001212 : Somatomedin B domain
IPR018998 : Endoribonuclease XendoU
IPR020436 : Somatomedin B, chordata
GO :
0005044 : Molecular Function : scavenger receptor activity
0006955 : Biological Process : immune response
0016788 : Molecular Function : hydrolase activity, acting on ester bonds
0030247 : Molecular Function : polysaccharide binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036755)
HIX0036755
HIT000195662
(
M36109
)
(Poly(U)-specific endoribonuclease; EC=3.1.-.-; Placental protein 11; PP11; Protein endoU; Uridylate-specific endoribonuclease; Precursor;)
genome : 48,103,528 - 48,119,350 (15,823)
query : 1 - 2,320 (2,320/2,320)
9 exons
identity = 0.998
3'(0.997;1.000;1.000;0.991;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.-.-
InterPro :
IPR001212 : Somatomedin B domain
IPR018998 : Endoribonuclease XendoU
IPR020436 : Somatomedin B, chordata
GO :
0005044 : Molecular Function : scavenger receptor activity
0006955 : Biological Process : immune response
0016788 : Molecular Function : hydrolase activity, acting on ester bonds
0030247 : Molecular Function : polysaccharide binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036755)
HIX0036755
HIT000082481
(
AK075446
)
Representative transcript
(Poly(U)-specific endoribonuclease; EC=3.1.-.-; Placental protein 11; PP11; Protein endoU; Uridylate-specific endoribonuclease; Precursor;)
genome : 48,103,528 - 48,119,319 (15,792)
query : 1 - 2,413 (2,413/2,413)
10 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.-.-
InterPro :
IPR001212 : Somatomedin B domain
IPR018998 : Endoribonuclease XendoU
IPR020436 : Somatomedin B, chordata
GO :
0005044 : Molecular Function : scavenger receptor activity
0006955 : Biological Process : immune response
0016788 : Molecular Function : hydrolase activity, acting on ester bonds
0030247 : Molecular Function : polysaccharide binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036755)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK132616
Bos
sp. (Cow) : BC148052
Danio
sp. (Zebrafish) : BC153519
Tetraodon
sp. (Tetraodon) : CR649799
Equus
sp. (Horse) : ENSECAT00000025967
Oryzias
sp. (Medaka) : ENSORLT00000004595
Oryzias
sp. (Medaka) : ENSORLT00000013826
Pongo
sp. (Orangutan) : ENSPPYT00000005269
Takifugu
sp. (Fugu) : SINFRUT00000162607
Rattus
sp. (Rat) : XM_001056619
Macaca
sp. (Macaque) : XM_001097705
Monodelphis
sp. (Opossum) : XM_001376085
Pan
sp. (Chimpanzee) : XM_522366
Canis
sp. (Dog) : XM_846703
HIX0036755
HIT000520472 (
ENST00000422538
)
(Poly(U)-specific endoribonuclease; EC=3.1.-.-; Placental protein 11; PP11; Protein endoU; Uridylate-specific endoribonuclease; Precursor;)
genome : 48,103,528 - 48,119,319 (15,792)
query : 1 - 2,413 (2,413/2,413)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036755)
HIX0036755
HIT000263849
(
BC069698
)
(Poly(U)-specific endoribonuclease; EC=3.1.-.-; Placental protein 11; PP11; Protein endoU; Uridylate-specific endoribonuclease; Precursor;)
genome : 48,103,590 - 48,119,236 (15,647)
query : 1 - 2,267 (2,267/2,267)
10 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.979)5'
coverage = 1.000
EC number :
EC 3.1.-.-
InterPro :
IPR001212 : Somatomedin B domain
IPR018998 : Endoribonuclease XendoU
IPR020436 : Somatomedin B, chordata
GO :
0005044 : Molecular Function : scavenger receptor activity
0006955 : Biological Process : immune response
0016788 : Molecular Function : hydrolase activity, acting on ester bonds
0030247 : Molecular Function : polysaccharide binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036755)
HIX0036755
HIT000263866
(
BC069715
)
(Poly(U)-specific endoribonuclease; EC=3.1.-.-; Placental protein 11; PP11; Protein endoU; Uridylate-specific endoribonuclease; Precursor;)
genome : 48,103,590 - 48,119,234 (15,645)
query : 1 - 2,144 (2,144/2,144)
9 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.-.-
InterPro :
IPR001212 : Somatomedin B domain
IPR018998 : Endoribonuclease XendoU
IPR020436 : Somatomedin B, chordata
GO :
0005044 : Molecular Function : scavenger receptor activity
0006955 : Biological Process : immune response
0016788 : Molecular Function : hydrolase activity, acting on ester bonds
0030247 : Molecular Function : polysaccharide binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036755)
HIX0036755
HIT000340044
(
BC111782
)
(Poly(U)-specific endoribonuclease; EC=3.1.-.-; Placental protein 11; PP11; Protein endoU; Uridylate-specific endoribonuclease; Precursor;)
genome : 48,104,209 - 48,119,329 (15,121)
query : 1 - 1,619 (1,619/1,619)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.-.-
InterPro :
IPR001212 : Somatomedin B domain
IPR018998 : Endoribonuclease XendoU
IPR020436 : Somatomedin B, chordata
GO :
0005044 : Molecular Function : scavenger receptor activity
0006955 : Biological Process : immune response
0016788 : Molecular Function : hydrolase activity, acting on ester bonds
0030247 : Molecular Function : polysaccharide binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036755)
HIX0036755
HIT000496932
(
AK302308
)
(Poly(U)-specific endoribonuclease; EC=3.1.-.-; Placental protein 11; PP11; Protein endoU; Uridylate-specific endoribonuclease; Precursor;)
genome : 48,104,231 - 48,111,432 (7,202)
query : 1 - 1,194 (1,194/1,194)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.-.-
InterPro :
IPR001212 : Somatomedin B domain
IPR018998 : Endoribonuclease XendoU
IPR020436 : Somatomedin B, chordata
GO :
0005044 : Molecular Function : scavenger receptor activity
0006955 : Biological Process : immune response
0016788 : Molecular Function : hydrolase activity, acting on ester bonds
0030247 : Molecular Function : polysaccharide binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 11, nucl 3, mito 3, mito_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036755)
HIX0036755
HIT000641247 (
ENST00000542202
)
(Poly(U)-specific endoribonuclease; EC=3.1.-.-; Placental protein 11; PP11; Protein endoU; Uridylate-specific endoribonuclease; Precursor;)
genome : 48,104,231 - 48,111,432 (7,202)
query : 1 - 1,194 (1,194/1,194)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.-.-
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 11, nucl 3, mito 3, mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036755)
HIX0036755
HIT000494793
(
AK300169
)
(Poly(U)-specific endoribonuclease isoform 3 precursor.)
genome : 48,104,237 - 48,119,317 (15,081)
query : 1 - 1,513 (1,513/1,513)
8 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.994)5'
coverage = 1.000
InterPro :
IPR001212 : Somatomedin B domain
IPR018998 : Endoribonuclease XendoU
IPR020436 : Somatomedin B, chordata
GO :
0005044 : Molecular Function : scavenger receptor activity
0006955 : Biological Process : immune response
0016788 : Molecular Function : hydrolase activity, acting on ester bonds
0030247 : Molecular Function : polysaccharide binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036755)
HIX0036755
HIT000644869 (
ENST00000545824
)
(Poly(U)-specific endoribonuclease isoform 3 precursor.)
genome : 48,104,237 - 48,119,317 (15,081)
query : 1 - 1,513 (1,513/1,513)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036755)
HIX0036755
HIT000265270
(
BC074763
)
(Poly(U)-specific endoribonuclease; EC=3.1.-.-; Placental protein 11; PP11; Protein endoU; Uridylate-specific endoribonuclease; Precursor;)
genome : 48,104,536 - 48,119,240 (14,705)
query : 1 - 1,203 (1,203/1,203)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.-.-
InterPro :
IPR001212 : Somatomedin B domain
IPR018998 : Endoribonuclease XendoU
IPR020436 : Somatomedin B, chordata
GO :
0005044 : Molecular Function : scavenger receptor activity
0006955 : Biological Process : immune response
0016788 : Molecular Function : hydrolase activity, acting on ester bonds
0030247 : Molecular Function : polysaccharide binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036755)
HIX0036755
HIT000490587
(
AK295963
)
(Poly(U)-specific endoribonuclease isoform 3 precursor.)
genome : 48,104,540 - 48,111,440 (6,901)
query : 1 - 1,036 (1,036/1,036)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001212 : Somatomedin B domain
IPR018998 : Endoribonuclease XendoU
IPR020436 : Somatomedin B, chordata
GO :
0005044 : Molecular Function : scavenger receptor activity
0006955 : Biological Process : immune response
0016788 : Molecular Function : hydrolase activity, acting on ester bonds
0030247 : Molecular Function : polysaccharide binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 11, extr 9, nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036755)
HIX0036755
HIT000433554
(
AK314688
)
(Poly(U)-specific endoribonuclease; EC=3.1.-.-; Placental protein 11; PP11; Protein endoU; Uridylate-specific endoribonuclease; Precursor;)
genome : 48,104,585 - 48,119,225 (14,641)
query : 1 - 1,139 (1,139/1,139)
9 exons
identity = 0.998
3'(0.992;1.000;1.000;1.000;1.000;1.000;0.993;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.1.-.-
InterPro :
IPR001212 : Somatomedin B domain
IPR018998 : Endoribonuclease XendoU
IPR020436 : Somatomedin B, chordata
GO :
0005044 : Molecular Function : scavenger receptor activity
0006955 : Biological Process : immune response
0016788 : Molecular Function : hydrolase activity, acting on ester bonds
0030247 : Molecular Function : polysaccharide binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036755)
HIX0036755
HIT000664842 (
ENST00000551186
)
(Poly(U)-specific endoribonuclease isoform 3 precursor.)
genome : 48,110,162 - 48,111,662 (1,501)
query : 1 - 652 (652/652)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 9, cyto 4.5, cyto_pero 3, mito 2,
golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036755)
HIX0010578
HIT000665984 (
ENST00000552502
)
(Hypothetical protein.)
genome : 48,111,374 - 48,114,229 (2,856)
query : 1 - 460 (460/460)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, nucl 5.5, cyto_nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010578)
HIX0010578
HIT000666458 (
ENST00000553045
)
(Hypothetical short protein.)
genome : 48,112,941 - 48,122,986 (10,046)
query : 1 - 532 (532/532)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 6, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010578)
HIX0010578
HIT000026860
(
AL831948
)
Representative transcript
(Rap guanine nucleotide exchange factor 3 isoform b.)
genome : 48,113,034 - 48,136,077 (23,044)
query : 1 - 2,962 (2,962/2,979)
4 exons
identity = 0.996
5'(1.000;1.000;1.000;0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 9, cyto_nucl 7, nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010578)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK137940
HIX0010578
HIT000665659 (
ENST00000552133
)
(Hypothetical short protein.)
genome : 48,113,384 - 48,113,899 (516)
query : 1 - 314 (314/314)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010578)
HIX0010576
HIT000012337
(
AK055723
)
Representative transcript
(Conserved hypothetical protein.)
genome : 48,121,934 - 48,124,381 (2,448)
query : 1 - 2,442 (2,442/2,442)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, extr 13, cyto_nucl 10.5, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010576)
HIX0220135
HIT000221499
(
U79275
)
Representative transcript
(Conserved hypothetical protein.)
genome : 48,128,454 - 48,129,492 (1,039)
query : 1 - 1,039 (1,039/1,060)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, nucl 9, cyto_nucl 8.5, mito 6, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220135)
HIX0219759
HIT000015224
(
AK074444
)
Representative transcript
(Rap guanine nucleotide exchange factor 3 isoform b.)
genome : 48,131,039 - 48,138,689 (7,651)
query : 1 - 2,326 (2,326/2,362)
12 exons
identity = 0.998
3'(0.995;1.000;1.000;1.000;1.000;1.000;1.000;
0.995;1.000;1.000;1.000;0.999)5'
coverage = 1.000
InterPro :
IPR001895 : Ras guanine-nucleotide exchange factors catalytic domain
IPR019804 : Ras guanine-nucleotide exchange factor, conserved site
IPR023578 : Ras guanine nucleotide exchange factor domain
IPR029071 : Ubiquitin-related domain
GO :
0005085 : Molecular Function : guanyl-nucleotide exchange factor activity
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 16.5, cyto 12.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219759)
HIX0219759
HIT000478739 (
ENST00000395360
)
(Ras guanine-nucleotide exchange factors catalytic domain containing protein.)
genome : 48,131,039 - 48,138,689 (7,651)
query : 1 - 2,325 (2,325/2,325)
12 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17.5, cyto_nucl 16.5, cyto 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219759)
HIX0219759
HIT000012116
(
AK055502
)
(Rap guanine nucleotide exchange factor 3 isoform b.)
genome : 48,131,040 - 48,136,075 (5,036)
query : 1 - 1,947 (1,947/1,947)
10 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.999)5'
coverage = 1.000
InterPro :
IPR001895 : Ras guanine-nucleotide exchange factors catalytic domain
IPR019804 : Ras guanine-nucleotide exchange factor, conserved site
IPR023578 : Ras guanine nucleotide exchange factor domain
IPR029071 : Ubiquitin-related domain
GO :
0005085 : Molecular Function : guanyl-nucleotide exchange factor activity
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 6, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219759)
HIX0219759
HIT000591906 (
ENST00000488250
)
(Ras guanine-nucleotide exchange factors catalytic domain containing protein.)
genome : 48,131,040 - 48,136,075 (5,036)
query : 1 - 1,947 (1,947/1,947)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 6, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219759)
HIX0219759
HIT000593948 (
ENST00000490387
)
(Ras guanine-nucleotide exchange factors catalytic domain containing protein.)
genome : 48,131,979 - 48,133,507 (1,529)
query : 1 - 699 (699/699)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, extr 7, cyto_nucl 7, cyto 6, E.R._mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219759)
HIX0219759
HIT000662432 (
ENST00000548434
)
(Ras guanine-nucleotide exchange factors catalytic domain containing protein.)
genome : 48,132,926 - 48,135,385 (2,460)
query : 1 - 684 (684/695)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.984
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 14.5, nucl 12, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219759)
HIX0219759
HIT000578094 (
ENST00000473777
)
(Ras guanine-nucleotide exchange factors catalytic domain containing protein.)
genome : 48,132,950 - 48,135,681 (2,732)
query : 1 - 726 (726/726)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, extr 7, nucl 3.5, extr_plas 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219759)
HIX0219759
HIT000580462 (
ENST00000476259
)
(Ras guanine-nucleotide exchange factors catalytic domain containing protein.)
genome : 48,133,242 - 48,134,178 (937)
query : 1 - 824 (824/824)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 19, nucl 8, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219759)
HIX0219936
HIT000598153 (
ENST00000494764
)
(Ras guanine nucleotide exchange factor domain containing protein.)
genome : 48,140,640 - 48,142,695 (2,056)
query : 1 - 783 (783/783)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, nucl 12, extr 11, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219936)
HIX0219936
HIT000598827 (
ENST00000495465
)
(Winged helix-turn-helix DNA-binding domain containing protein.)
genome : 48,141,502 - 48,144,952 (3,451)
query : 1 - 910 (910/910)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 13, nucl 8, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219936)
HIX0219936
HIT000426945
(
AK308079
)
Representative transcript
(DEP domain containing protein.)
genome : 48,141,903 - 48,164,797 (22,895)
query : 1 - 1,428 (1,428/1,428)
13 exons
identity = 0.998
3'(1.000;1.000;1.000;0.993;1.000;1.000;1.000;
0.994;1.000;1.000;1.000;1.000;0.994)5'
coverage = 1.000
InterPro :
IPR000591 : DEP domain
IPR000595 : Cyclic nucleotide-binding domain
IPR011991 : Winged helix-turn-helix DNA-binding domain
IPR014710 : RmlC-like jelly roll fold
IPR018490 : Cyclic nucleotide-binding-like
GO :
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 14.5, nucl 9.5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219936)
HIX0219936
HIT000570980 (
ENST00000466322
)
(DEP domain containing protein.)
genome : 48,143,736 - 48,152,221 (8,486)
query : 1 - 855 (855/855)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15.5, cyto_mito 11.6667, cyto_nucl 6.5, cyto 6,
extr 5, cyto_pero 4.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219936)
HIX0219936
HIT000599299 (
ENST00000495953
)
(DEP domain containing protein.)
genome : 48,144,953 - 48,151,966 (7,014)
query : 1 - 648 (648/648)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 9, cyto_mito 8.66667, extr 8, cyto 8,
mito 7.5, nucl 6.5, cyto_pero 5.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219936)
HIX0219936
HIT000663230 (
ENST00000549347
)
(Conserved hypothetical protein.)
genome : 48,146,345 - 48,151,970 (5,626)
query : 1 - 573 (573/573)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 10, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219936)
HIX0010579
HIT000662488 (
ENST00000548498
)
(Heme transporter HRG1.)
genome : 48,147,699 - 48,172,954 (25,256)
query : 1 - 618 (618/618)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010579)
HIX0010579
HIT000665545 (
ENST00000552003
)
(Hypothetical short protein.)
genome : 48,147,713 - 48,150,268 (2,556)
query : 1 - 882 (882/882)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto_nucl 5.33333, nucl 4.5, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010579)
HIX0010579
HIT000661193 (
ENST00000547002
)
(Heme transporter HRG1.)
genome : 48,152,361 - 48,174,090 (21,730)
query : 1 - 751 (751/751)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010579)
HIX0010579
HIT000663134 (
ENST00000549243
)
(Conserved hypothetical protein.)
genome : 48,152,777 - 48,172,894 (20,118)
query : 1 - 577 (577/577)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, mito 3.5, mito_pero 2.5, plas 2, cyto 2,
cyto_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010579)
HIX0010579
HIT000031162
(
BC002759
)
(Heme transporter HRG1.)
genome : 48,165,951 - 48,176,534 (10,584)
query : 25 - 1,024 (1,000/1,041)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.977
InterPro :
IPR026218 : Heme transporter HRG
GO :
0015232 : Molecular Function : heme transporter activity
0015886 : Biological Process : heme transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010579)
HIX0010579
HIT000540826 (
ENST00000442892
)
(Heme transporter HRG1.)
genome : 48,165,951 - 48,176,534 (10,584)
query : 25 - 1,024 (1,000/1,024)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.977
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010579)
HIX0010579
HIT000206704 (
NM_017842
)
(Heme transporter HRG1; Heme-responsive gene 1 protein homolog; HRG-1; hHRG-1; Solute carrier family 48 member 1;)
genome : 48,166,967 - 48,176,536 (9,570)
query : 1 - 3,034 (3,034/3,034)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, extr 6, E.R. 2, lyso 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010579)
HIX0010579
HIT000540152 (
ENST00000442218
)
(Heme transporter HRG1; Heme-responsive gene 1 protein homolog; HRG-1; hHRG-1; Solute carrier family 48 member 1;)
genome : 48,166,991 - 48,176,536 (9,546)
query : 1 - 3,010 (3,010/3,010)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, extr 6, E.R. 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010579)
HIX0010579
HIT000002971
(
AK000496
)
(Heme transporter HRG1; Heme-responsive gene 1 protein homolog; HRG-1; hHRG-1; Solute carrier family 48 member 1;)
genome : 48,166,991 - 48,175,453 (8,463)
query : 1 - 1,927 (1,927/1,950)
3 exons
identity = 0.998
5'(1.000;0.994;0.998)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, extr 6, E.R. 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010579)
HIX0010579
HIT000664940 (
ENST00000551301
)
(Heme transporter HRG1.)
genome : 48,166,998 - 48,174,607 (7,610)
query : 1 - 1,070 (1,070/1,070)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 23, plas 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010579)
HIX0010579
HIT000261735
(
BC065033
)
(Heme transporter HRG1; Heme-responsive gene 1 protein homolog; HRG-1; hHRG-1; Solute carrier family 48 member 1;)
genome : 48,167,019 - 48,175,453 (8,435)
query : 1 - 1,900 (1,900/1,960)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR026218 : Heme transporter HRG
GO :
0015232 : Molecular Function : heme transporter activity
0015886 : Biological Process : heme transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, extr 6, E.R. 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010579)
HIX0010579
HIT000258993
(
BC026344
)
Representative transcript
(Heme transporter HRG1; Heme-responsive gene 1 protein homolog; HRG-1; hHRG-1; Solute carrier family 48 member 1;)
genome : 48,167,021 - 48,176,534 (9,514)
query : 1 - 2,978 (2,978/2,993)
3 exons
identity = 0.999
5'(1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR026218 : Heme transporter HRG
GO :
0015232 : Molecular Function : heme transporter activity
0015886 : Biological Process : heme transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 22, extr 6, E.R. 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010579)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK089421
Danio
sp. (Zebrafish) : BC076146
Rattus
sp. (Rat) : BC105856
Danio
sp. (Zebrafish) : BC154226
Tetraodon
sp. (Tetraodon) : CR683264
Oryzias
sp. (Medaka) : ENSORLT00000020495
Takifugu
sp. (Fugu) : SINFRUT00000129690
Macaca
sp. (Macaque) : XM_001098579
Pan
sp. (Chimpanzee) : XM_001162613
Equus
sp. (Horse) : XM_001490287
Canis
sp. (Dog) : XM_543716
Bos
sp. (Cow) : XM_586893
HIX0010579
HIT000488699
(
AK294075
)
(Heme transporter HRG1.)
genome : 48,167,053 - 48,175,139 (8,087)
query : 1 - 951 (951/951)
4 exons
identity = 0.992
5'(1.000;1.000;1.000;0.986)3'
coverage = 1.000
InterPro :
IPR026218 : Heme transporter HRG
GO :
0015232 : Molecular Function : heme transporter activity
0015886 : Biological Process : heme transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 27, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010579)
HIX0010579
HIT000035474
(
BC011823
)
(Heme transporter HRG1.)
genome : 48,167,141 - 48,175,453 (8,313)
query : 1 - 1,778 (1,778/1,828)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR026218 : Heme transporter HRG
GO :
0015232 : Molecular Function : heme transporter activity
0015886 : Biological Process : heme transport
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 24, lyso 4, extr 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010579)
HIX0010579
HIT000566494 (
ENST00000461620
)
(Heme transporter HRG1.)
genome : 48,172,138 - 48,172,976 (839)
query : 1 - 459 (459/459)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, plas 13, golg 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010579)
HIX0010579
HIT000580315 (
ENST00000476104
)
(Heme transporter HRG1.)
genome : 48,172,149 - 48,172,975 (827)
query : 1 - 567 (567/567)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 15, extr 13, lyso 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010579)
HIX0010579
HIT000009130
(
AK025856
)
(Hypothetical protein.)
genome : 48,174,886 - 48,176,536 (1,651)
query : 1 - 1,651 (1,651/1,668)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto_nucl 7.5, nucl 6, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010579)
HIX0219747
HIT000010041
(
AK026767
)
Representative transcript
(Conserved hypothetical protein.)
genome : 48,176,508 - 48,178,741 (2,234)
query : 1 - 2,042 (2,042/2,058)
2 exons
identity = 0.996
3'(0.995;0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 12.5, cyto_nucl 12, nucl 6.5,
extr_plas 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219747)
HIX0129972
HIT000447452
(
DQ580921
)
Representative transcript
(Non-protein coding transcript.)
genome : 48,177,205 - 48,177,234 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0129972)
HIX0219747
HIT000663696 (
ENST00000549883
)
(Conserved hypothetical protein.)
genome : 48,177,421 - 48,179,164 (1,744)
query : 1 - 537 (537/537)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 12.5, cyto_nucl 8, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219747)
HIX0220627
HIT000711270 (
ENST00000599515
)
(Conserved hypothetical protein.)
genome : 48,178,706 - 48,179,787 (1,082)
query : 1 - 1,082 (1,082/1,082)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 12.5, extr 12, nucl 10.5, cyto 9.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220627)
HIX0219940
HIT000428413
(
AK309547
)
Representative transcript
(Histone deacetylase superfamily protein.)
genome : 48,179,234 - 48,181,952 (2,719)
query : 1 - 1,012 (1,012/1,012)
3 exons
identity = 0.999
3'(1.000;1.000;0.998)5'
coverage = 1.000
InterPro :
IPR000286 : Histone deacetylase superfamily
IPR023801 : Histone deacetylase domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 4, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219940)
HIX0219940
HIT000575675 (
ENST00000471235
)
(Histone deacetylase superfamily protein.)
genome : 48,179,234 - 48,181,952 (2,719)
query : 1 - 1,012 (1,012/1,012)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 4, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219940)
HIX0219963
HIT000592546 (
ENST00000488927
)
(Histone deacetylase domain containing protein.)
genome : 48,182,610 - 48,185,783 (3,174)
query : 1 - 678 (678/678)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, plas 7, cyto_golg 7, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219963)
HIX0219963
HIT000582061 (
ENST00000477937
)
(Histone deacetylase domain containing protein.)
genome : 48,184,160 - 48,185,806 (1,647)
query : 3 - 410 (408/410)
4 exons
identity = 0.988
3'(1.000;1.000;1.000;0.967)5'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 10.5, nucl 10, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219963)
HIX0219957
HIT000523385 (
ENST00000425451
)
(Conserved hypothetical protein.)
genome : 48,189,370 - 48,213,666 (24,297)
query : 1 - 617 (617/621)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.994
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 10.5, cyto 10, nucl 7, extr_plas 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219957)
HIX0219957
HIT000528604 (
ENST00000430670
)
(Histone deacetylase superfamily protein.)
genome : 48,189,450 - 48,213,658 (24,209)
query : 1 - 914 (914/914)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26.5, cyto_nucl 16, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219957)
HIX0219957
HIT000520188 (
ENST00000422254
)
(Conserved hypothetical protein.)
genome : 48,190,890 - 48,206,834 (15,945)
query : 1 - 593 (593/593)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 11.5, mito 11, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219957)
HIX0219957
HIT000538227 (
ENST00000440293
)
(Conserved hypothetical protein.)
genome : 48,190,901 - 48,213,669 (22,769)
query : 1 - 580 (580/580)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 15, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219957)
HIX0219957
HIT000545397 (
ENST00000447463
)
(Conserved hypothetical protein.)
genome : 48,191,167 - 48,214,384 (23,218)
query : 1 - 555 (555/558)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 14.5, nucl 9, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219957)
HIX0219957
HIT000532004 (
ENST00000434070
)
(Conserved hypothetical protein.)
genome : 48,191,167 - 48,226,915 (35,749)
query : 1 - 645 (645/645)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, cyto_nucl 15, nucl 9, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219957)
HIX0219957
HIT000519165 (
ENST00000421231
)
(Conserved hypothetical protein.)
genome : 48,191,213 - 48,206,834 (15,622)
query : 1 - 583 (583/583)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 14, nucl 8, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219957)
HIX0219957
HIT000548739 (
ENST00000450805
)
(Conserved hypothetical protein.)
genome : 48,191,897 - 48,213,045 (21,149)
query : 1 - 579 (579/579)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 11.5, mito 11, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219957)
HIX0219957
HIT000515836 (
ENST00000417902
)
(Conserved hypothetical protein.)
genome : 48,191,901 - 48,213,744 (21,844)
query : 1 - 576 (576/576)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, cyto_nucl 14, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219957)
HIX0219957
HIT000531619 (
ENST00000433685
)
(Conserved hypothetical protein.)
genome : 48,191,971 - 48,214,356 (22,386)
query : 1 - 402 (402/402)
4 exons
identity = 0.990
3'(1.000;1.000;1.000;0.958)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 11.5, mito 10, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219957)
HIX0219957
HIT000515041 (
ENST00000417107
)
(Conserved hypothetical protein.)
genome : 48,192,343 - 48,213,763 (21,421)
query : 1 - 569 (569/569)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, cyto 3, mito 3, cyto_mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219957)
HIX0219957
HIT000543171 (
ENST00000445237
)
(Conserved hypothetical protein.)
genome : 48,192,557 - 48,207,267 (14,711)
query : 1 - 362 (362/364)
3 exons
identity = 0.986
3'(0.975;1.000;1.000)5'
coverage = 0.995
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 6.33333, cyto 6, nucl 5.5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219957)
HIX0219993
HIT000664403 (
ENST00000550684
)
(Non-protein coding transcript.)
genome : 48,220,637 - 48,228,304 (7,668)
query : 1 - 343 (343/343)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219993)
HIX0219993
HIT000660756 (
ENST00000546523
)
(Hypothetical protein.)
genome : 48,223,277 - 48,228,337 (5,061)
query : 1 - 353 (353/353)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 10, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219993)
HIX0219993
HIT000664605 (
ENST00000550909
)
(Hypothetical protein.)
genome : 48,225,132 - 48,228,498 (3,367)
query : 1 - 582 (582/582)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, pero 5, mito 2, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219993)
HIX0219993
HIT000662542 (
ENST00000548564
)
(Hypothetical short protein.)
genome : 48,225,158 - 48,231,681 (6,524)
query : 1 - 573 (573/573)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, mito 10, extr_plas 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219993)
HIX0219993
HIT000664436 (
ENST00000550720
)
(Hypothetical protein.)
genome : 48,225,158 - 48,228,319 (3,162)
query : 1 - 561 (561/561)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, extr 10, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219993)
HIX0010581
HIT000197420 (
NM_000376
)
(Vitamin D3 receptor; VDR; 1,25-dihydroxyvitamin D3 receptor; Nuclear receptor subfamily 1 group I member 1;)
genome : 48,235,321 - 48,298,814 (63,494)
query : 1 - 4,652 (4,652/4,669)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010581)
HIX0010581
HIT000365511 (
NM_001017535
)
(Vitamin D3 receptor; VDR; 1,25-dihydroxyvitamin D3 receptor; Nuclear receptor subfamily 1 group I member 1;)
genome : 48,235,321 - 48,298,814 (63,494)
query : 1 - 4,774 (4,774/4,791)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010581)
HIX0010581
HIT000653799 (
NM_001017536
)
(Vitamin D3 receptor; VDR; 1,25-dihydroxyvitamin D3 receptor; Nuclear receptor subfamily 1 group I member 1;)
genome : 48,235,321 - 48,298,814 (63,494)
query : 1 - 5,043 (5,043/5,060)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010581)
HIX0010581
HIT000478706 (
ENST00000395324
)
(Vitamin D3 receptor; VDR; 1,25-dihydroxyvitamin D3 receptor; Nuclear receptor subfamily 1 group I member 1;)
genome : 48,235,320 - 48,336,831 (101,512)
query : 1 - 4,762 (4,762/4,762)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010581)
HIX0010581
HIT000104135 (
ENST00000229022
)
(Vitamin D3 receptor; VDR; 1,25-dihydroxyvitamin D3 receptor; Nuclear receptor subfamily 1 group I member 1;)
genome : 48,235,322 - 48,298,814 (63,493)
query : 1 - 4,773 (4,773/4,773)
11 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010581)
HIX0010581
HIT000191149
(
J03258
)
Representative transcript
(Vitamin D3 receptor; VDR; 1,25-dihydroxyvitamin D3 receptor; Nuclear receptor subfamily 1 group I member 1;)
genome : 48,235,322 - 48,298,769 (63,448)
query : 1 - 4,604 (4,604/4,604)
10 exons
identity = 0.994
3'(0.992;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000324 : Vitamin D receptor
IPR000536 : Nuclear hormone receptor, ligand-binding, core
IPR001628 : Zinc finger, nuclear hormone receptor-type
IPR001723 : Steroid hormone receptor
IPR008946 : Nuclear hormone receptor, ligand-binding
IPR013088 : Zinc finger, NHR/GATA-type
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0003707 : Molecular Function : steroid hormone receptor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0008434 : Molecular Function : calcitriol receptor activity
0043401 : Biological Process : steroid hormone mediated signaling pathway
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010581)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK156789
Equus
sp. (Horse) : AY944069
Gallus
sp. (Chicken) : CR389825
Pongo
sp. (Orangutan) : CR859646
Danio
sp. (Zebrafish) : DQ017633
Danio
sp. (Zebrafish) : ENSDART00000063214
Oryzias
sp. (Medaka) : EU403115
Oryzias
sp. (Medaka) : EU403116
Tetraodon
sp. (Tetraodon) : GSTENT00010085001
Tetraodon
sp. (Tetraodon) : GSTENT00013513001
Rattus
sp. (Rat) : J04147
Takifugu
sp. (Fugu) : SINFRUT00000138841
Takifugu
sp. (Fugu) : SINFRUT00000182149
Macaca
sp. (Macaque) : XM_001095385
Monodelphis
sp. (Opossum) : XM_001377985
Canis
sp. (Dog) : XM_543714
Pan
sp. (Chimpanzee) : XR_023818
HIX0010581
HIT000384974
(
AK225844
)
(Vitamin D3 receptor isoform VDRB1.)
genome : 48,236,426 - 48,298,805 (62,380)
query : 9 - 3,544 (3,536/3,560)
10 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
0.993;1.000;1.000)5'
coverage = 0.998
InterPro :
IPR000324 : Vitamin D receptor
IPR000536 : Nuclear hormone receptor, ligand-binding, core
IPR001628 : Zinc finger, nuclear hormone receptor-type
IPR001723 : Steroid hormone receptor
IPR008946 : Nuclear hormone receptor, ligand-binding
IPR013088 : Zinc finger, NHR/GATA-type
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0003707 : Molecular Function : steroid hormone receptor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0008434 : Molecular Function : calcitriol receptor activity
0043401 : Biological Process : steroid hormone mediated signaling pathway
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010581)
HIX0010581
HIT000663220 (
ENST00000549336
)
(Vitamin D3 receptor; VDR; 1,25-dihydroxyvitamin D3 receptor; Nuclear receptor subfamily 1 group I member 1;)
genome : 48,236,426 - 48,298,805 (62,380)
query : 1 - 3,538 (3,538/3,554)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010581)
HIX0010581
HIT000008104
(
AK024830
)
(Conserved hypothetical protein.)
genome : 48,236,426 - 48,238,096 (1,671)
query : 1 - 1,671 (1,671/1,687)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto 8, mito 8, cyto_nucl 6.33333,
cyto_pero 4.83333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010581)
HIX0010581
HIT000260134
(
BC060832
)
(Vitamin D3 receptor; VDR; 1,25-dihydroxyvitamin D3 receptor; Nuclear receptor subfamily 1 group I member 1;)
genome : 48,236,427 - 48,298,786 (62,360)
query : 1 - 3,909 (3,909/3,925)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR000324 : Vitamin D receptor
IPR000536 : Nuclear hormone receptor, ligand-binding, core
IPR001628 : Zinc finger, nuclear hormone receptor-type
IPR001723 : Steroid hormone receptor
IPR008946 : Nuclear hormone receptor, ligand-binding
IPR013088 : Zinc finger, NHR/GATA-type
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0003707 : Molecular Function : steroid hormone receptor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0008434 : Molecular Function : calcitriol receptor activity
0043401 : Biological Process : steroid hormone mediated signaling pathway
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010581)
HIX0010581
HIT000664079 (
ENST00000550325
)
(Vitamin D3 receptor; VDR; 1,25-dihydroxyvitamin D3 receptor; Nuclear receptor subfamily 1 group I member 1;)
genome : 48,236,426 - 48,298,786 (62,361)
query : 1 - 3,910 (3,910/3,925)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010581)
HIX0010581
HIT000093099
(
BC033465
)
(Vitamin D3 receptor; VDR; 1,25-dihydroxyvitamin D3 receptor; Nuclear receptor subfamily 1 group I member 1;)
genome : 48,237,140 - 48,298,793 (61,654)
query : 1 - 2,812 (2,812/2,812)
10 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
0.993;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000324 : Vitamin D receptor
IPR000536 : Nuclear hormone receptor, ligand-binding, core
IPR001628 : Zinc finger, nuclear hormone receptor-type
IPR001723 : Steroid hormone receptor
IPR008946 : Nuclear hormone receptor, ligand-binding
IPR013088 : Zinc finger, NHR/GATA-type
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0003707 : Molecular Function : steroid hormone receptor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0008434 : Molecular Function : calcitriol receptor activity
0043401 : Biological Process : steroid hormone mediated signaling pathway
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010581)
HIX0129722
HIT000428453
(
AK309587
)
Representative transcript
(Formin-like protein 19; AtFH19;)
genome : 48,237,497 - 48,336,934 (99,438)
query : 1 - 1,077 (1,077/1,077)
2 exons
identity = 0.990
5'(0.988;0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, mito 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0129722)
HIX0010581
HIT000494070
(
AK299446
)
(Vitamin D3 receptor; VDR; 1,25-dihydroxyvitamin D3 receptor; Nuclear receptor subfamily 1 group I member 1;)
genome : 48,238,253 - 48,298,805 (60,553)
query : 3 - 1,784 (1,782/1,784)
9 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
0.997;1.000)5'
coverage = 0.999
InterPro :
IPR000324 : Vitamin D receptor
IPR000536 : Nuclear hormone receptor, ligand-binding, core
IPR001628 : Zinc finger, nuclear hormone receptor-type
IPR001723 : Steroid hormone receptor
IPR008946 : Nuclear hormone receptor, ligand-binding
IPR013088 : Zinc finger, NHR/GATA-type
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0003707 : Molecular Function : steroid hormone receptor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0008434 : Molecular Function : calcitriol receptor activity
0043401 : Biological Process : steroid hormone mediated signaling pathway
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 14, nucl 12, mito 3, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010581)
HIX0010581
HIT000634717 (
ENST00000535672
)
(Vitamin D3 receptor; VDR; 1,25-dihydroxyvitamin D3 receptor; Nuclear receptor subfamily 1 group I member 1;)
genome : 48,238,253 - 48,298,805 (60,553)
query : 1 - 1,782 (1,782/1,782)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 14, nucl 12, mito 3, golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010581)
HIX0010581
HIT000661244 (
ENST00000547065
)
(Vitamin D3 receptor; VDR; 1,25-dihydroxyvitamin D3 receptor; Nuclear receptor subfamily 1 group I member 1;)
genome : 48,238,253 - 48,298,805 (60,553)
query : 1 - 1,782 (1,782/1,782)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 14, nucl 12, mito 3, golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010581)
HIX0010581
HIT000322865
(
X67482
)
(Vitamin D3 receptor; VDR; 1,25-dihydroxyvitamin D3 receptor; Nuclear receptor subfamily 1 group I member 1;)
genome : 48,238,528 - 48,276,524 (37,997)
query : 1 - 1,335 (1,335/1,335)
9 exons
identity = 0.999
3'(0.996;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000324 : Vitamin D receptor
IPR000536 : Nuclear hormone receptor, ligand-binding, core
IPR001628 : Zinc finger, nuclear hormone receptor-type
IPR001723 : Steroid hormone receptor
IPR008946 : Nuclear hormone receptor, ligand-binding
IPR013088 : Zinc finger, NHR/GATA-type
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0003707 : Molecular Function : steroid hormone receptor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0008434 : Molecular Function : calcitriol receptor activity
0043401 : Biological Process : steroid hormone mediated signaling pathway
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010581)
HIX0010581
HIT000431133
(
AK312267
)
(Vitamin D3 receptor; VDR; 1,25-dihydroxyvitamin D3 receptor; Nuclear receptor subfamily 1 group I member 1;)
genome : 48,238,529 - 48,298,805 (60,277)
query : 2 - 1,436 (1,435/1,436)
10 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR000324 : Vitamin D receptor
IPR000536 : Nuclear hormone receptor, ligand-binding, core
IPR001628 : Zinc finger, nuclear hormone receptor-type
IPR001723 : Steroid hormone receptor
IPR008946 : Nuclear hormone receptor, ligand-binding
IPR013088 : Zinc finger, NHR/GATA-type
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0003707 : Molecular Function : steroid hormone receptor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0008434 : Molecular Function : calcitriol receptor activity
0043401 : Biological Process : steroid hormone mediated signaling pathway
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010581)
HIX0010581
HIT000062810
(
AF026260
)
(Vitamin D3 receptor; VDR; 1,25-dihydroxyvitamin D3 receptor; Nuclear receptor subfamily 1 group I member 1;)
genome : 48,238,529 - 48,272,896 (34,368)
query : 1 - 1,284 (1,284/1,284)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000324 : Vitamin D receptor
IPR000536 : Nuclear hormone receptor, ligand-binding, core
IPR001628 : Zinc finger, nuclear hormone receptor-type
IPR001723 : Steroid hormone receptor
IPR008946 : Nuclear hormone receptor, ligand-binding
IPR013088 : Zinc finger, NHR/GATA-type
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0003707 : Molecular Function : steroid hormone receptor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0008434 : Molecular Function : calcitriol receptor activity
0043401 : Biological Process : steroid hormone mediated signaling pathway
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010581)
HIX0010581
HIT000486611
(
AB307700
)
(Vitamin D3 receptor; VDR; 1,25-dihydroxyvitamin D3 receptor; Nuclear receptor subfamily 1 group I member 1;)
genome : 48,238,529 - 48,272,896 (34,368)
query : 1 - 1,284 (1,284/1,284)
8 exons
identity = 0.998
3'(0.996;1.000;1.000;1.000;1.000;0.995;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000324 : Vitamin D receptor
IPR000536 : Nuclear hormone receptor, ligand-binding, core
IPR001628 : Zinc finger, nuclear hormone receptor-type
IPR001723 : Steroid hormone receptor
IPR008946 : Nuclear hormone receptor, ligand-binding
IPR013088 : Zinc finger, NHR/GATA-type
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0003707 : Molecular Function : steroid hormone receptor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0008434 : Molecular Function : calcitriol receptor activity
0043401 : Biological Process : steroid hormone mediated signaling pathway
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010581)
HIX0010581
HIT000653589
(
HQ692836
)
(Vitamin D3 receptor; VDR; 1,25-dihydroxyvitamin D3 receptor; Nuclear receptor subfamily 1 group I member 1;)
genome : 48,238,529 - 48,272,896 (34,368)
query : 1 - 1,284 (1,284/1,284)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR000324 : Vitamin D receptor
IPR000536 : Nuclear hormone receptor, ligand-binding, core
IPR001628 : Zinc finger, nuclear hormone receptor-type
IPR001723 : Steroid hormone receptor
IPR008946 : Nuclear hormone receptor, ligand-binding
IPR013088 : Zinc finger, NHR/GATA-type
GO :
0003677 : Molecular Function : DNA binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0003707 : Molecular Function : steroid hormone receptor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0008434 : Molecular Function : calcitriol receptor activity
0043401 : Biological Process : steroid hormone mediated signaling pathway
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 16.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010581)
HIX0010581
HIT000660874 (
ENST00000546653
)
(Vitamin D3 receptor; VDR; 1,25-dihydroxyvitamin D3 receptor; Nuclear receptor subfamily 1 group I member 1;)
genome : 48,249,417 - 48,298,799 (49,383)
query : 1 - 937 (937/937)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31.5, cyto_nucl 16.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010581)
HIX0010581
HIT000664069 (
ENST00000550314
)
(Vitamin D3 receptor; VDR; 1,25-dihydroxyvitamin D3 receptor; Nuclear receptor subfamily 1 group I member 1;)
genome : 48,251,431 - 48,276,718 (25,288)
query : 1 - 562 (562/562)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 17.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010581)
HIX0010581
HIT000662632 (
ENST00000548664
)
(Vitamin D3 receptor; VDR; 1,25-dihydroxyvitamin D3 receptor; Nuclear receptor subfamily 1 group I member 1;)
genome : 48,251,444 - 48,298,823 (47,380)
query : 1 - 596 (596/596)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 17.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010581)
HIX0010581
HIT000196168
(
M65208
)
(Vitamin D3 receptor; VDR; 1,25-dihydroxyvitamin D3 receptor; Nuclear receptor subfamily 1 group I member 1;)
genome : 48,258,835 - 48,272,827 (13,993)
query : 1 - 203 (203/203)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001628 : Zinc finger, nuclear hormone receptor-type
IPR013088 : Zinc finger, NHR/GATA-type
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006355 : Biological Process : regulation of transcription, DNA-templated
0008270 : Molecular Function : zinc ion binding
0043565 : Molecular Function : sequence-specific DNA binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010581)
HIX0026478
HIT000048865
(
AK129594
)
Representative transcript
(Conserved hypothetical protein.)
genome : 48,276,432 - 48,295,308 (18,877)
query : 2 - 1,288 (1,287/1,288)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.997)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 19.5, cyto 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026478)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000005277
Pan
sp. (Chimpanzee) : ENSPTRT00000057334
HIX0026478
HIT000361879 (
ENST00000380601
)
(Conserved hypothetical protein.)
genome : 48,276,432 - 48,295,308 (18,877)
query : 1 - 1,287 (1,287/1,287)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 19.5, cyto 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026478)
HIX0022951
HIT000013056
(
AK056442
)
Representative transcript
(Conserved hypothetical protein.)
genome : 48,354,280 - 48,357,252 (2,973)
query : 1 - 2,972 (2,972/2,972)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 11, extr 10, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022951)
HIX0220043
HIT000662191 (
ENST00000548153
)
(Protein of unknown function DUF1356, TMEM106 family protein.)
genome : 48,357,379 - 48,359,305 (1,927)
query : 1 - 558 (558/558)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16.5, cyto_nucl 13, extr 8, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220043)
HIX0220043
HIT000665707 (
ENST00000552187
)
(Protein of unknown function DUF1356, TMEM106 family protein.)
genome : 48,357,384 - 48,358,548 (1,165)
query : 1 - 590 (590/590)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 12, extr 10, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220043)
HIX0220013
HIT000661304 (
ENST00000547136
)
(Protein of unknown function DUF1356, TMEM106 family protein.)
genome : 48,359,436 - 48,360,233 (798)
query : 1 - 707 (707/707)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220013)
HIX0220013
HIT000661788 (
ENST00000547682
)
(Protein of unknown function DUF1356, TMEM106 family protein.)
genome : 48,359,711 - 48,362,271 (2,561)
query : 1 - 491 (491/491)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15, extr 7, mito 6, nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220013)
HIX0220013
HIT000663174 (
ENST00000549287
)
(Protein of unknown function DUF1356, TMEM106 family protein.)
genome : 48,360,339 - 48,362,271 (1,933)
query : 1 - 587 (587/587)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10.5, cyto_pero 9.83333, cyto_nucl 9.5, extr 7,
pero 5.5, nucl 4, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220013)
HIX0010583
HIT000033097
(
BC007252
)
(Collagen alpha-1(II) chain; Alpha-1 type II collagen; Precursor; Fragment;)
genome : 48,366,750 - 48,370,706 (3,957)
query : 1 - 1,580 (1,580/1,621)
7 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.991;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000885 : Fibrillar collagen, C-terminal
IPR008160 : Collagen triple helix repeat
GO :
0005201 : Molecular Function : extracellular matrix structural constituent
0005581 : Cellular Component : collagen trimer
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 14.5, nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010583)
HIX0010583
HIT000321172
(
X06268
)
(Fibrillar collagen, C-terminal domain containing protein.)
genome : 48,366,750 - 48,369,820 (3,071)
query : 1 - 1,382 (1,382/1,382)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000885 : Fibrillar collagen, C-terminal
IPR008160 : Collagen triple helix repeat
GO :
0005201 : Molecular Function : extracellular matrix structural constituent
0005581 : Cellular Component : collagen trimer
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 11, extr 7, nucl 3.5,
extr_plas 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010583)
HIX0010583
HIT000028879
(
AL834148
)
Representative transcript
(Collagen alpha-1(II) chain isoform 2 precursor.)
genome : 48,366,984 - 48,382,254 (15,271)
query : 1 - 3,756 (3,756/3,814)
37 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.981;1.000;0.991;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000885 : Fibrillar collagen, C-terminal
IPR008160 : Collagen triple helix repeat
GO :
0005201 : Molecular Function : extracellular matrix structural constituent
0005581 : Cellular Component : collagen trimer
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 9.5, cyto_nucl 8.5, mito 7, nucl 6.5, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010583)
HIX0010583
HIT000597404 (
ENST00000493991
)
(Fibrillar collagen, C-terminal domain containing protein.)
genome : 48,366,984 - 48,382,254 (15,271)
query : 1 - 3,756 (3,756/3,756)
37 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 9.5, cyto_nucl 8.5, mito 7, nucl 6.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010583)
HIX0010583
HIT000100125
(
BT007205
)
(Fibrillar collagen, C-terminal domain containing protein.)
genome : 48,367,191 - 48,369,328 (2,138)
query : 1 - 806 (806/807)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR000885 : Fibrillar collagen, C-terminal
GO :
0005201 : Molecular Function : extracellular matrix structural constituent
0005581 : Cellular Component : collagen trimer
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, extr 7, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010583)
HIX0010583
HIT000196067
(
M63281
)
(Fibrillar collagen, C-terminal domain containing protein.)
genome : 48,369,123 - 48,371,133 (2,011)
query : 1 - 621 (621/621)
6 exons
identity = 0.994
3'(0.985;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000885 : Fibrillar collagen, C-terminal
IPR008160 : Collagen triple helix repeat
GO :
0005201 : Molecular Function : extracellular matrix structural constituent
0005581 : Cellular Component : collagen trimer
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, nucl 13, cyto 10, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010583)
HIX0010583
HIT000661167 (
ENST00000546974
)
(Fibrillar collagen, C-terminal domain containing protein.)
genome : 48,369,136 - 48,371,228 (2,093)
query : 1 - 703 (703/703)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 9.5, cyto_nucl 8, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010583)
HIX0010583
HIT000321389
(
X13783
)
(Collagen triple helix repeat containing protein.)
genome : 48,369,344 - 48,380,145 (10,802)
query : 1 - 2,142 (2,142/2,142)
29 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.991;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.981;1.000;1.000;0.956;0.981;
1.000;0.963;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR008160 : Collagen triple helix repeat
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, cyto_nucl 11.8333, nucl 9.5,
cyto_golg 7.33333, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010583)
HIX0010583
HIT000587270 (
ENST00000483376
)
(Collagen triple helix repeat containing protein.)
genome : 48,375,126 - 48,377,638 (2,513)
query : 1 - 641 (641/641)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, mito 8, cyto 4.5, cyto_nucl 4.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010583)
HIX0219962
HIT000579264 (
ENST00000474996
)
(von Willebrand factor, type C domain containing protein.)
genome : 48,391,398 - 48,398,232 (6,835)
query : 1 - 760 (760/760)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 6.5, cyto_nucl 5, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219962)
HIX0219962
HIT000571513 (
ENST00000466884
)
(Hypothetical short protein.)
genome : 48,391,952 - 48,392,642 (691)
query : 1 - 478 (478/478)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219962)
HIX0219962
HIT000594160 (
ENST00000490609
)
(von Willebrand factor, type C domain containing protein.)
genome : 48,393,480 - 48,398,269 (4,790)
query : 1 - 679 (679/679)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219962)
HIX0219962
HIT000570429 (
ENST00000465743
)
(Hypothetical short protein.)
genome : 48,396,405 - 48,398,145 (1,741)
query : 1 - 546 (546/546)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219962)
HIX0220000
HIT000666379 (
ENST00000552958
)
(Hypothetical short protein.)
genome : 48,399,060 - 48,405,010 (5,951)
query : 1 - 550 (550/550)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 10.5, extr 10, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220000)
HIX0220000
HIT000661015 (
ENST00000546804
)
(Conserved hypothetical protein.)
genome : 48,401,764 - 48,405,010 (3,247)
query : 1 - 530 (530/530)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 7, cyto_mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220000)
HIX0026471
HIT000048030
(
AK128157
)
Representative transcript
(Conserved hypothetical protein.)
genome : 48,405,087 - 48,419,252 (14,166)
query : 1 - 3,109 (3,109/3,109)
4 exons
identity = 0.997
5'(1.000;0.979;0.988;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto_nucl 8.66667, cyto 7, nucl 6,
cyto_pero 5.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026471)
HIX0026471
HIT000660952 (
ENST00000546738
)
(Conserved hypothetical protein.)
genome : 48,405,087 - 48,419,252 (14,166)
query : 1 - 3,112 (3,112/3,112)
4 exons
identity = 0.999
5'(1.000;0.979;0.988;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, extr 10, cyto_nucl 4.83333, nucl 4, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026471)
HIX0210669
HIT000091862
(
BC029593
)
Representative transcript
(Conserved hypothetical protein.)
genome : 48,413,554 - 48,419,165 (5,612)
query : 1 - 962 (962/1,007)
2 exons
identity = 0.997
3'(0.997;0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 11.5, cyto 10, nucl 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210669)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : XM_001100818
Pan
sp. (Chimpanzee) : XM_001161433
HIX0210669
HIT000661723 (
ENST00000547602
)
(Conserved hypothetical protein.)
genome : 48,413,554 - 48,419,165 (5,612)
query : 1 - 962 (962/962)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 11.5, cyto 10, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210669)
HIX0026344
HIT000724551 (
NM_001267594
)
(Sentrin-specific protease 1; EC=3.4.22.68; Sentrin/SUMO-specific protease SENP1;)
genome : 48,436,681 - 48,500,091 (63,411)
query : 1 - 4,684 (4,684/4,693)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 0.998
EC number :
EC 3.4.22.68
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, cyto_nucl 8.33333, cyto_mito 7.33333,
nucl 5.5, plas 5, pero 4, mito 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026344)
HIX0026344
HIT000724552 (
NM_001267595
)
(Sentrin-specific protease 1; EC=3.4.22.68; Sentrin/SUMO-specific protease SENP1;)
genome : 48,436,681 - 48,499,775 (63,095)
query : 1 - 4,939 (4,939/4,948)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 0.998
EC number :
EC 3.4.22.68
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, cyto_nucl 8.33333, cyto_mito 7.33333,
nucl 5.5, plas 5, pero 4, mito 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026344)
HIX0026344
HIT000727335 (
NR_051991
)
(Sentrin-specific protease 1; EC=3.4.22.68; Sentrin/SUMO-specific protease SENP1;)
genome : 48,436,681 - 48,499,775 (63,095)
query : 1 - 5,125 (5,125/5,134)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
EC number :
EC 3.4.22.68
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 10.3333, cyto 8, nucl 7.5,
cyto_pero 5.66667, mito_nucl 5.66667
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026344)
HIX0026344
HIT000727336 (
NR_051992
)
(Sentrin-specific protease 2; EC=3.4.22.68; Axin-associating molecule; Axam; Sentrin/SUMO-specific protease SENP2;)
genome : 48,436,681 - 48,499,775 (63,095)
query : 1 - 5,138 (5,138/5,147)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.998
EC number :
EC 3.4.22.68
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, nucl 9, plas 5, cyto 3, pero 2, golg 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026344)
HIX0026344
HIT000055332
(
BX640784
)
(Sentrin-specific protease 1; EC=3.4.22.68; Sentrin/SUMO-specific protease SENP1;)
genome : 48,436,681 - 48,499,617 (62,937)
query : 3 - 4,971 (4,969/4,980)
19 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.994;1.000;
1.000;0.988;1.000;1.000;1.000)5'
coverage = 0.998
EC number :
EC 3.4.22.68
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 10.3333, cyto 8, nucl 7.5,
cyto_pero 5.66667, mito_nucl 5.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026344)
HIX0026344
HIT000102121 (
ENST00000004980
)
(Sentrin-specific protease 1; EC=3.4.22.68; Sentrin/SUMO-specific protease SENP1;)
genome : 48,436,681 - 48,499,619 (62,939)
query : 1 - 4,838 (4,838/4,838)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.22.68
SOSUI :
SOLUBLE PROTEIN
PSORT :
pero 14, plas 7.5, cyto 5, extr_plas 5, nucl 3,
cyto_golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026344)
HIX0026344
HIT000132606 (
ENST00000339976
)
(Sentrin-specific protease 1; EC=3.4.22.68; Sentrin/SUMO-specific protease SENP1;)
genome : 48,436,681 - 48,499,619 (62,939)
query : 1 - 4,969 (4,969/4,969)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.22.68
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 10.3333, cyto 8, nucl 7.5,
cyto_pero 5.66667, mito_nucl 5.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026344)
HIX0026344
HIT000665709 (
ENST00000552189
)
(Sentrin-specific protease 1; EC=3.4.22.68; Sentrin/SUMO-specific protease SENP1;)
genome : 48,436,681 - 48,499,617 (62,937)
query : 1 - 4,967 (4,967/4,967)
19 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.22.68
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 10.3333, cyto 8, nucl 7.5,
cyto_pero 5.66667, mito_nucl 5.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026344)
HIX0026344
HIT000546306 (
ENST00000448372
)
(Sentrin-specific protease 1; EC=3.4.22.68; Sentrin/SUMO-specific protease SENP1;)
genome : 48,436,757 - 48,499,641 (62,885)
query : 1 - 4,726 (4,726/4,726)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.22.68
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, cyto_nucl 8.33333, cyto_mito 7.33333,
nucl 5.5, plas 5, pero 4, mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026344)
HIX0026344
HIT000054704
(
BX537920
)
(Sentrin-specific protease 1; EC=3.4.22.68; Sentrin/SUMO-specific protease SENP1;)
genome : 48,437,007 - 48,499,775 (62,769)
query : 1 - 4,811 (4,811/4,829)
19 exons
identity = 0.998
3'(0.997;1.000;0.988;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.988;1.000;0.979;1.000)5'
coverage = 1.000
EC number :
EC 3.4.22.68
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 18, nucl 16, cyto 10, extr 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026344)
HIX0026344
HIT000052953
(
BC045639
)
(Sentrin-specific protease 1; EC=3.4.22.68; Sentrin/SUMO-specific protease SENP1;)
genome : 48,437,348 - 48,499,591 (62,244)
query : 1 - 4,086 (4,086/4,127)
18 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000;1.000;1.000;
0.988;1.000;1.000;1.000;0.990;0.994;1.000;
1.000;1.000;1.000;0.997)5'
coverage = 1.000
EC number :
EC 3.4.22.68
InterPro :
IPR003653 : Peptidase C48, SUMO/Sentrin/Ubl1
GO :
0006508 : Biological Process : proteolysis
0008234 : Molecular Function : cysteine-type peptidase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, cyto_nucl 8.33333, cyto_mito 7.33333,
nucl 5.5, plas 5, pero 4, mito 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026344)
HIX0026344
HIT000664964 (
ENST00000551330
)
(Sentrin-specific protease 1; EC=3.4.22.68; Sentrin/SUMO-specific protease SENP1;)
genome : 48,437,348 - 48,499,591 (62,244)
query : 1 - 4,088 (4,088/4,088)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.22.68
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, cyto_nucl 8.33333, cyto_mito 7.33333,
nucl 5.5, plas 5, pero 4, mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026344)
HIX0026344
HIT000424857
(
AK292060
)
Representative transcript
(Sentrin-specific protease 1; EC=3.4.22.68; Sentrin/SUMO-specific protease SENP1;)
genome : 48,438,718 - 48,499,862 (61,145)
query : 1 - 2,418 (2,418/2,418)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.994;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.22.68
InterPro :
IPR003653 : Peptidase C48, SUMO/Sentrin/Ubl1
GO :
0006508 : Biological Process : proteolysis
0008234 : Molecular Function : cysteine-type peptidase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, cyto_nucl 8.33333, cyto_mito 7.33333,
nucl 5.5, plas 5, pero 4, mito 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026344)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK054521
Danio
sp. (Zebrafish) : BC054703
Pongo
sp. (Orangutan) : CR858740
Equus
sp. (Horse) : ENSECAT00000011103
Macaca
sp. (Macaque) : ENSMMUT00000028317
Pan
sp. (Chimpanzee) : ENSPTRT00000042126
Rattus
sp. (Rat) : XM_001060796
Gallus
sp. (Chicken) : XM_423848
Canis
sp. (Dog) : XM_534823
Bos
sp. (Cow) : XM_618285
HIX0026344
HIT000431740
(
AK312874
)
(Sentrin-specific protease 1; EC=3.4.22.68; Sentrin/SUMO-specific protease SENP1;)
genome : 48,439,105 - 48,500,091 (60,987)
query : 1 - 2,261 (2,261/2,261)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;0.994;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.22.68
InterPro :
IPR003653 : Peptidase C48, SUMO/Sentrin/Ubl1
GO :
0006508 : Biological Process : proteolysis
0008234 : Molecular Function : cysteine-type peptidase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, cyto_nucl 8.33333, cyto_mito 7.33333,
nucl 5.5, plas 5, pero 4, mito 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026344)
HIX0026344
HIT000663382 (
ENST00000549518
)
(Sentrin-specific protease 1; EC=3.4.22.68; Sentrin/SUMO-specific protease SENP1;)
genome : 48,439,105 - 48,500,091 (60,987)
query : 1 - 2,260 (2,260/2,260)
18 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.22.68
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, cyto_nucl 8.33333, cyto_mito 7.33333,
nucl 5.5, plas 5, pero 4, mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026344)
HIX0026344
HIT000071566
(
AF149770
)
(Sentrin-specific protease 1; EC=3.4.22.68; Sentrin/SUMO-specific protease SENP1;)
genome : 48,439,105 - 48,491,908 (52,804)
query : 4 - 1,932 (1,929/1,932)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.998
EC number :
EC 3.4.22.68
InterPro :
IPR003653 : Peptidase C48, SUMO/Sentrin/Ubl1
GO :
0006508 : Biological Process : proteolysis
0008234 : Molecular Function : cysteine-type peptidase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, cyto_nucl 8.33333, cyto_mito 7.33333,
nucl 5.5, plas 5, pero 4, mito 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026344)
HIX0026344
HIT000663452 (
ENST00000549595
)
(Sentrin-specific protease 1; EC=3.4.22.68; Sentrin/SUMO-specific protease SENP1;)
genome : 48,439,105 - 48,491,908 (52,804)
query : 4 - 1,932 (1,929/1,932)
16 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 0.998
EC number :
EC 3.4.22.68
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, cyto_nucl 8.33333, cyto_mito 7.33333,
nucl 5.5, plas 5, pero 4, mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026344)
HIX0210561
HIT000572780 (
ENST00000468202
)
(Ribosomal protein L37e family protein.)
genome : 48,448,596 - 48,449,374 (779)
query : 1 - 779 (779/779)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, mito 5, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210561)
HIX0210561
HIT000568350 (
ENST00000463559
)
(Ribosomal protein L37e family protein.)
genome : 48,448,754 - 48,449,036 (283)
query : 1 - 283 (283/283)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13.5, extr 13, mito_nucl 8.33333,
cyto_nucl 2.83333, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210561)
HIX0026344
HIT000664989 (
ENST00000551358
)
(Sentrin-specific protease 1; EC=3.4.22.68; Sentrin/SUMO-specific protease SENP1;)
genome : 48,457,414 - 48,459,463 (2,050)
query : 1 - 452 (452/452)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.22.68
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.1667, cyto 13.5, nucl 9.5,
cyto_plas 8.83333, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026344)
HIX0026344
HIT000661964 (
ENST00000547886
)
(Sentrin-specific protease 1; EC=3.4.22.68; Sentrin/SUMO-specific protease SENP1;)
genome : 48,473,867 - 48,490,210 (16,344)
query : 1 - 965 (965/965)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.22.68
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11, nucl 9.5, mito 9, cyto 7.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026344)
HIX0026344
HIT000665184 (
ENST00000551592
)
(Sentrin-specific protease 1; EC=3.4.22.68; SUMO-1 protease 2; SuPr-2; Sentrin/SUMO-specific protease SENP1;)
genome : 48,473,876 - 48,491,817 (17,942)
query : 1 - 866 (866/866)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.22.68
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 14.5, cyto 10, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026344)
HIX0026344
HIT000665362 (
ENST00000551798
)
(Sentrin-specific protease 1; EC=3.4.22.68; Sentrin/SUMO-specific protease SENP1;)
genome : 48,477,478 - 48,499,835 (22,358)
query : 1 - 562 (562/562)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.22.68
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto_nucl 15, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026344)
HIX0192178
HIT000517932 (
ENST00000419998
)
(ATPase, V1 complex, subunit F family protein.)
genome : 48,478,833 - 48,479,204 (372)
query : 1 - 372 (372/372)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 11, mito 9, nucl 4.5,
E.R._mito 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0192178)
HIX0192178
HIT000663418 (
ENST00000549557
)
(ATPase, V1 complex, subunit F family protein.)
genome : 48,478,845 - 48,479,204 (360)
query : 1 - 360 (360/360)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 11, mito 9, nucl 4.5,
E.R._mito 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0192178)
HIX0192178
pHIT000021541 ( pHIT000021541 )
Representative transcript
(Conserved hypothetical protein.)
genome : 48,478,845 - 48,479,204 (360)
query : 1 - 360 (360/360)
1 exon
InterPro :
IPR005772 : ATPase, V1 complex, subunit F, eukaryotic
IPR008218 : ATPase, V1 complex, subunit F
GO :
0015991 : Biological Process : ATP hydrolysis coupled proton transport
0033180 : Cellular Component : proton-transporting V-type ATPase, V1 domain
0034220 : Biological Process : ion transmembrane transport
0046961 : Molecular Function : proton-transporting ATPase activity, rotational mechanism
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0192178)
CAGE tag :
H10BA69A1808
Ortholog candidate ( ->
Evola
)
Tetraodon
sp. (Tetraodon) : CR694449
Monodelphis
sp. (Opossum) : ENSMODT00000038853
Rattus
sp. (Rat) : ENSRNOT00000032536
Macaca
sp. (Macaque) : XM_001100924
Pan
sp. (Chimpanzee) : XM_001161349
Mus
sp. (Mouse) : XR_035038
HIX0026344
HIT000661343 (
ENST00000547181
)
(Sentrin-specific protease 1; EC=3.4.22.68; Sentrin/SUMO-specific protease SENP1;)
genome : 48,482,336 - 48,495,300 (12,965)
query : 19 - 691 (673/691)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.974
EC number :
EC 3.4.22.68
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15.5, cyto 7.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026344)
HIX0026344
HIT000663695 (
ENST00000549882
)
(Sentrin-specific protease 1; EC=3.4.22.68; Sentrin/SUMO-specific protease SENP1;)
genome : 48,491,520 - 48,499,849 (8,330)
query : 1 - 475 (475/475)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.4.22.68
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11.8333, cyto 10.5, cyto_pero 7.66667,
extr 7, mito 7, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026344)
HIX0219900
HIT000662926 (
ENST00000549003
)
(Phosphofructokinase family protein.)
genome : 48,499,265 - 48,526,763 (27,499)
query : 1 - 594 (594/594)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto_nucl 8, mito_pero 8, cyto 7,
E.R._mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219900)
HIX0219900
HIT000664616 (
ENST00000550924
)
(Phosphofructokinase family protein.)
genome : 48,499,404 - 48,525,177 (25,774)
query : 1 - 436 (436/452)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.965
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto_nucl 10, cyto 8.5, nucl 6.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219900)
HIX0219900
HIT000663744 (
ENST00000549941
)
(Phosphofructokinase family protein.)
genome : 48,499,694 - 48,526,772 (27,079)
query : 1 - 594 (594/594)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23, cyto 5, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219900)
HIX0219900
HIT000664020 (
ENST00000550257
)
(Phosphofructokinase family protein.)
genome : 48,499,706 - 48,525,164 (25,459)
query : 1 - 571 (571/571)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, cyto_nucl 7, nucl 6.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219900)
HIX0219900
HIT000660968 (
ENST00000546755
)
(Conserved hypothetical protein.)
genome : 48,499,890 - 48,516,624 (16,735)
query : 1 - 590 (590/590)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20, cyto_nucl 13, mito 7, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219900)
HIX0219900
HIT000663249 (
ENST00000549366
)
(Phosphofructokinase family protein.)
genome : 48,499,899 - 48,525,125 (25,227)
query : 1 - 570 (570/570)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 12, mito 7, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219900)
HIX0219900
HIT000666232 (
ENST00000552792
)
(Phosphofructokinase family protein.)
genome : 48,499,927 - 48,525,175 (25,249)
query : 1 - 626 (626/626)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, mito 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219900)
HIX0219900
HIT000662310 (
ENST00000548288
)
(Phosphofructokinase family protein.)
genome : 48,500,171 - 48,525,151 (24,981)
query : 1 - 582 (582/582)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, mito 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219900)
HIX0219900
HIT000661245 (
ENST00000547066
)
(Conserved hypothetical protein.)
genome : 48,513,047 - 48,525,166 (12,120)
query : 1 - 616 (616/616)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, cyto_nucl 10.5, cyto 9.5, nucl 6.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219900)
HIX0219900
HIT000101109
(
D21862
)
(Non-protein coding transcript.)
genome : 48,513,109 - 48,513,189 (81)
query : 1 - 81 (81/89)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.910
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219900)
HIX0219900
HIT000662681 (
ENST00000548720
)
(Phosphofructokinase family protein.)
genome : 48,513,131 - 48,525,502 (12,372)
query : 1 - 630 (630/630)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219900)
HIX0219900
HIT000665144 (
ENST00000551548
)
(Phosphofructokinase family protein.)
genome : 48,513,135 - 48,525,703 (12,569)
query : 1 - 542 (542/542)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto_nucl 8.5, cyto 6.5, nucl 5.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219900)
HIX0219900
HIT000101108
(
D21861
)
Representative transcript
(Non-protein coding transcript.)
genome : 48,516,429 - 48,516,557 (129)
query : 1 - 129 (129/129)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219900)
HIX0219852
HIT000498305
(
AK303681
)
Representative transcript
(6-phosphofructokinase, eukaryotic type family protein.)
genome : 48,527,139 - 48,539,607 (12,469)
query : 1 - 1,991 (1,991/1,991)
18 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.993;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000023 : Phosphofructokinase domain
IPR009161 : 6-phosphofructokinase, eukaryotic type
IPR015912 : Phosphofructokinase, conserved site
IPR022953 : Phosphofructokinase
GO :
0003872 : Molecular Function : 6-phosphofructokinase activity
0005737 : Cellular Component : cytoplasm
0005945 : Cellular Component : 6-phosphofructokinase complex
0006002 : Biological Process : fructose 6-phosphate metabolic process
0006096 : Biological Process : glycolytic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 13.3333, cyto_pero 9.5, nucl 7.5,
extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219852)
HIX0219852
HIT000191338
(
J05533
)
(Phosphofructokinase family protein.)
genome : 48,528,790 - 48,538,864 (10,075)
query : 1 - 1,139 (1,139/1,139)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.7.1.11
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00030 : Pentose phosphate pathway (39)
00051 : Fructose and mannose metabolism (61)
00052 : Galactose metabolism (37)
00680 : Methane metabolism (75)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
InterPro :
IPR000023 : Phosphofructokinase domain
IPR015912 : Phosphofructokinase, conserved site
IPR022953 : Phosphofructokinase
GO :
0003872 : Molecular Function : 6-phosphofructokinase activity
0005945 : Cellular Component : 6-phosphofructokinase complex
0006002 : Biological Process : fructose 6-phosphate metabolic process
0006096 : Biological Process : glycolytic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 17.5, nucl 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219852)
HIX0219852
HIT000661314 (
ENST00000547148
)
(Phosphofructokinase family protein.)
genome : 48,531,140 - 48,534,657 (3,518)
query : 1 - 772 (772/775)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.993)3'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 12, mito 11, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219852)
HIX0219852
HIT000268571
(
CR541698
)
(Phosphofructokinase family protein.)
genome : 48,531,513 - 48,539,488 (7,976)
query : 1 - 1,395 (1,395/1,395)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000023 : Phosphofructokinase domain
IPR015912 : Phosphofructokinase, conserved site
IPR022953 : Phosphofructokinase
GO :
0003872 : Molecular Function : 6-phosphofructokinase activity
0005945 : Cellular Component : 6-phosphofructokinase complex
0006002 : Biological Process : fructose 6-phosphate metabolic process
0006096 : Biological Process : glycolytic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 16, nucl 7, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219852)
HIX0219852
HIT000666196 (
ENST00000552752
)
(Phosphofructokinase family protein.)
genome : 48,531,574 - 48,536,649 (5,076)
query : 1 - 887 (887/887)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, extr 5, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219852)
HIX0219852
HIT000054488
(
BX537703
)
(Phosphofructokinase family protein.)
genome : 48,535,108 - 48,539,887 (4,780)
query : 101 - 4,630 (4,530/4,643)
2 exons
identity = 0.999
5'(0.999;1.000)3'
coverage = 0.978
InterPro :
IPR000023 : Phosphofructokinase domain
IPR022953 : Phosphofructokinase
GO :
0003872 : Molecular Function : 6-phosphofructokinase activity
0005945 : Cellular Component : 6-phosphofructokinase complex
0006002 : Biological Process : fructose 6-phosphate metabolic process
0006096 : Biological Process : glycolytic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 9.5, nucl 7, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219852)
HIX0219852
HIT000664508 (
ENST00000550802
)
(Phosphofructokinase family protein.)
genome : 48,535,121 - 48,537,856 (2,736)
query : 1 - 626 (626/626)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 13.5, cyto_nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219852)
HIX0219852
HIT000665731 (
ENST00000552214
)
(Phosphofructokinase family protein.)
genome : 48,535,455 - 48,536,680 (1,226)
query : 1 - 425 (425/425)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, cyto 11.5, cyto_nucl 7.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219852)
HIX0219852
HIT000666254 (
ENST00000552818
)
(Phosphofructokinase family protein.)
genome : 48,535,488 - 48,536,161 (674)
query : 1 - 588 (588/588)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, extr 11, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219852)
HIX0219852
HIT000666466 (
ENST00000553055
)
(Phosphofructokinase domain containing protein.)
genome : 48,535,756 - 48,537,947 (2,192)
query : 1 - 275 (275/289)
3 exons
identity = 0.993
5'(1.000;1.000;0.983)3'
coverage = 0.952
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21.5, cyto_nucl 12.5, mito 6, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219852)
HIX0219852
HIT000216422
(
S72312
)
(Non-protein coding transcript.)
genome : 48,538,814 - 48,538,874 (61)
query : 1 - 60 (60/60)
1 exon
identity = 0.984
5'(0.984)3'
coverage = 1.000
EC number :
EC 2.7.1.11
KEGG pathway :
00010 : Glycolysis / Gluconeogenesis (45)
00030 : Pentose phosphate pathway (39)
00051 : Fructose and mannose metabolism (61)
00052 : Galactose metabolism (37)
00680 : Methane metabolism (75)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
01120 : Microbial metabolism in diverse environments (468)
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219852)
HIX0018065
HIT000243156
(
AF464877
)
Representative transcript
(Ankyrin repeat and SOCS box protein 8; ASB-8;)
genome : 48,541,573 - 48,551,274 (9,702)
query : 1 - 2,504 (2,504/2,535)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001496 : SOCS protein, C-terminal
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 11.5, mito 10, nucl 5, E.R._mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018065)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB171741
Gallus
sp. (Chicken) : AJ720998
Mus
sp. (Mouse) : AK016001
Danio
sp. (Zebrafish) : BC053213
Bos
sp. (Cow) : BC123430
Pongo
sp. (Orangutan) : CR860554
Oryzias
sp. (Medaka) : ENSORLT00000008498
Rattus
sp. (Rat) : ENSRNOT00000013704
Tetraodon
sp. (Tetraodon) : GSTENT00028143001
Takifugu
sp. (Fugu) : SINFRUT00000154282
Pan
sp. (Chimpanzee) : XM_001161039
Equus
sp. (Horse) : XM_001490907
Canis
sp. (Dog) : XM_858305
HIX0018065
HIT000209122 (
NM_024095
)
(Ankyrin repeat and SOCS box protein 8; ASB-8;)
genome : 48,541,573 - 48,551,377 (9,805)
query : 1 - 2,612 (2,612/2,629)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 11.5, mito 10, nucl 5, E.R._mito 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018065)
HIX0018065
HIT000121400 (
ENST00000317697
)
(Ankyrin repeat and SOCS box protein 8; ASB-8;)
genome : 48,541,571 - 48,551,378 (9,808)
query : 1 - 2,615 (2,615/2,615)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 11.5, mito 10, nucl 5, E.R._mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018065)
HIX0018065
HIT000635594 (
ENST00000536549
)
(Ankyrin repeat and SOCS box protein 8; ASB-8;)
genome : 48,541,572 - 48,551,378 (9,807)
query : 1 - 2,610 (2,610/2,610)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 11.5, mito 10, nucl 5, E.R._mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018065)
HIX0018065
HIT000030319
(
BC001321
)
(Ankyrin repeat and SOCS box protein 8; ASB-8;)
genome : 48,542,465 - 48,551,285 (8,821)
query : 1 - 1,628 (1,628/1,662)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001496 : SOCS protein, C-terminal
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 11.5, mito 10, nucl 5, E.R._mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018065)
HIX0018065
HIT000008182
(
AK024908
)
(Ankyrin repeat and SOCS box protein 8; ASB-8;)
genome : 48,542,465 - 48,551,279 (8,815)
query : 1 - 1,621 (1,621/1,639)
4 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001496 : SOCS protein, C-terminal
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 11.5, mito 10, nucl 5, E.R._mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018065)
HIX0018065
HIT000045469
(
AK125596
)
(Ankyrin repeat and SOCS box protein 8.)
genome : 48,542,466 - 48,544,932 (2,467)
query : 1 - 2,467 (2,467/2,467)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR001496 : SOCS protein, C-terminal
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018065)
HIX0018065
HIT000491637
(
AK297013
)
(Ankyrin repeat and SOCS box protein 8.)
genome : 48,542,922 - 48,551,287 (8,366)
query : 1 - 1,070 (1,070/1,070)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001496 : SOCS protein, C-terminal
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 11.8333, cyto_pero 9.33333,
mito 8, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018065)
HIX0018065
HIT000422754
(
AK289957
)
(Ankyrin repeat and SOCS box protein 8; ASB-8;)
genome : 48,543,012 - 48,551,349 (8,338)
query : 1 - 1,141 (1,141/1,141)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001496 : SOCS protein, C-terminal
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 11.5, mito 10, nucl 5, E.R._mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018065)
HIX0018065
HIT000268186
(
CR457336
)
(Ankyrin repeat and SOCS box protein 8; ASB-8;)
genome : 48,543,150 - 48,547,279 (4,130)
query : 1 - 866 (866/867)
3 exons
identity = 0.999
3'(0.998;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR001496 : SOCS protein, C-terminal
IPR002110 : Ankyrin repeat
IPR020683 : Ankyrin repeat-containing domain
GO :
0005515 : Molecular Function : protein binding
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 11.5, mito 10, nucl 5, E.R._mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018065)
HIX0018065
HIT000636799 (
ENST00000537754
)
(Ankyrin repeat and SOCS box protein 8.)
genome : 48,543,213 - 48,551,303 (8,091)
query : 1 - 631 (631/631)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14.5, cyto 14, nucl 11, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018065)
HIX0018065
HIT000635983 (
ENST00000536938
)
(Ankyrin repeat and SOCS box protein 8.)
genome : 48,543,240 - 48,545,169 (1,930)
query : 1 - 728 (728/728)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, nucl 6.5, cyto_nucl 5.5, cyto 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018065)
HIX0018065
HIT000635998 (
ENST00000536953
)
(Ankyrin repeat and SOCS box protein 8.)
genome : 48,543,312 - 48,551,373 (8,062)
query : 1 - 923 (923/923)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto 11, cyto_nucl 9, cyto_pero 8.5, mito 4,
nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018065)
HIX0018065
HIT000638573 (
ENST00000539528
)
(Ankyrin repeat and SOCS box protein 8.)
genome : 48,543,392 - 48,551,285 (7,894)
query : 1 - 839 (839/839)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto 11, cyto_nucl 9, cyto_pero 8.5, mito 4,
nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018065)
HIX0018065
HIT000634100 (
ENST00000535055
)
(Ankyrin repeat and SOCS box protein 8.)
genome : 48,543,575 - 48,551,374 (7,800)
query : 1 - 657 (657/657)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto 11, cyto_nucl 9, cyto_pero 8.5, mito 4,
nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018065)
HIX0018065
HIT000638910 (
ENST00000539865
)
(Ankyrin repeat and SOCS box protein 8.)
genome : 48,543,586 - 48,547,317 (3,732)
query : 16 - 538 (523/538)
4 exons
identity = 0.998
3'(1.000;1.000;1.000;0.994)5'
coverage = 0.972
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, plas 4, pero 4, extr 2, cysk_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018065)
HIX0018065
HIT000635116 (
ENST00000536071
)
(Ankyrin repeat and SOCS box protein 8.)
genome : 48,543,622 - 48,551,298 (7,677)
query : 1 - 568 (568/568)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto 9, cyto_nucl 8.5, cyto_pero 8, nucl 4.5,
mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018065)
HIX0018065
HIT000638548 (
ENST00000539503
)
(Ankyrin repeat and SOCS box protein 8.)
genome : 48,543,634 - 48,574,996 (31,363)
query : 1 - 800 (800/800)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 10.5, mito 10, cyto_pero 8.33333,
nucl 5, E.R._mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018065)
HIX0018065
HIT000639188 (
ENST00000540143
)
(Ankyrin repeat and SOCS box protein 8.)
genome : 48,543,644 - 48,551,298 (7,655)
query : 1 - 559 (559/559)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 18, plas 4, pero 4, extr 2, cysk_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018065)
HIX0018065
HIT000644836 (
ENST00000545791
)
(Ankyrin repeat and SOCS box protein 8.)
genome : 48,543,674 - 48,551,300 (7,627)
query : 1 - 570 (570/570)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, cyto_nucl 10.5, cyto_pero 8.33333, mito 8,
nucl 6, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018065)
HIX0018065
HIT000639257 (
ENST00000540212
)
(Ankyrin repeat and SOCS box protein 8.)
genome : 48,543,679 - 48,551,247 (7,569)
query : 1 - 561 (561/561)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 11, cyto_pero 8.83333, extr 6,
nucl 6, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018065)
HIX0018065
HIT000638509 (
ENST00000539464
)
(Ankyrin repeat and SOCS box protein 8.)
genome : 48,543,703 - 48,551,374 (7,672)
query : 1 - 580 (580/580)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 18, plas 4, pero 4, extr 2, cysk_plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018065)
HIX0018065
HIT000639827 (
ENST00000540782
)
(Ankyrin repeat and SOCS box protein 8.)
genome : 48,544,699 - 48,551,352 (6,654)
query : 1 - 659 (659/659)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, extr 10, cyto_nucl 9, cyto_pero 9, mito 4,
nucl 3.5, pero 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018065)
HIX0018065
HIT000635033 (
ENST00000535988
)
(Ankyrin repeat and SOCS box protein 8.)
genome : 48,544,701 - 48,551,370 (6,670)
query : 1 - 679 (679/679)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, extr 10, cyto_nucl 9, cyto_pero 9, mito 4,
nucl 3.5, pero 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018065)
HIX0018065
HIT000662256 (
ENST00000548228
)
(Ankyrin repeat and SOCS box protein 8.)
genome : 48,545,065 - 48,547,708 (2,644)
query : 1 - 582 (582/582)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_mito 11.8333, cyto 11.5, cyto_nucl 11.5, mito 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018065)
HIX0220469
HIT000664716 (
ENST00000551045
)
(Thioredoxin-like fold domain containing protein.)
genome : 48,554,028 - 48,554,661 (634)
query : 1 - 634 (634/634)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, cyto 8, cyto_nucl 7, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220469)
HIX0220228
HIT000660869 (
ENST00000546648
)
(Band 7 protein family protein.)
genome : 48,562,630 - 48,563,442 (813)
query : 1 - 813 (813/813)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, cyto 12.5, nucl 7.5, extr 7, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220228)
HIX0220550
HIT000666009 (
ENST00000552531
)
(Conserved hypothetical protein.)
genome : 48,565,373 - 48,567,136 (1,764)
query : 1 - 1,044 (1,044/1,044)
3 exons
identity = 0.991
5'(1.000;0.976;0.993)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 11, cyto_nucl 11, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220550)
HIX0018152
HIT000365267 (
NM_001013635
)
(Conserved hypothetical protein.)
genome : 48,577,366 - 48,579,709 (2,344)
query : 1 - 2,344 (2,344/2,380)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 9.5, cyto_nucl 9, cysk 8, nucl 7.5, extr 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018152)
HIX0018152
HIT000120945 (
ENST00000316554
)
(Conserved hypothetical protein.)
genome : 48,577,366 - 48,579,709 (2,344)
query : 1 - 2,344 (2,344/2,344)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 9.5, cyto_nucl 9, cysk 8, nucl 7.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018152)
HIX0018152
HIT000012617
(
AK056003
)
(Conserved hypothetical protein.)
genome : 48,577,399 - 48,579,709 (2,311)
query : 1 - 2,311 (2,311/2,311)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 9.5, cyto_nucl 9, cysk 8, nucl 7.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018152)
HIX0018152
HIT000094618
(
BC036801
)
(Conserved hypothetical protein.)
genome : 48,577,415 - 48,579,709 (2,295)
query : 1 - 2,295 (2,295/2,331)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 9.5, cyto_nucl 9, cysk 8, nucl 7.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018152)
HIX0018152
HIT000099083
(
BC049387
)
(Conserved hypothetical protein.)
genome : 48,577,446 - 48,579,709 (2,264)
query : 1 - 2,265 (2,265/2,340)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 9.5, cyto_nucl 9, cysk 8, nucl 7.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018152)
HIX0018152
HIT000013397
(
AK056783
)
Representative transcript
(Conserved hypothetical protein.)
genome : 48,577,892 - 48,579,705 (1,814)
query : 1 - 1,814 (1,814/1,814)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 9.5, cyto_nucl 9, cysk 8, nucl 7.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0018152)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK080988
Rattus
sp. (Rat) : BC097418
Bos
sp. (Cow) : BC120392
Equus
sp. (Horse) : ENSECAT00000007241
Pongo
sp. (Orangutan) : ENSPPYT00000005288
Macaca
sp. (Macaque) : XM_001101379
Pan
sp. (Chimpanzee) : XM_001160701
Monodelphis
sp. (Opossum) : XM_001364623
Canis
sp. (Dog) : XM_846645
HIX0021619
HIT000012741
(
AK056127
)
Representative transcript
(Conserved hypothetical protein.)
genome : 48,583,132 - 48,584,990 (1,859)
query : 1 - 1,859 (1,859/1,859)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17, extr 8, nucl 4, extr_plas 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021619)
HIX0019727
HIT000024455
(
AL110189
)
Representative transcript
(Conserved hypothetical protein.)
genome : 48,590,162 - 48,591,476 (1,315)
query : 1 - 1,322 (1,322/1,350)
1 exon
identity = 0.986
3'(0.986)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 11.5, mito_pero 7.5, cyto 4,
cyto_nucl 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019727)
HIX0026442
HIT000045818
(
AK125945
)
Representative transcript
(Conserved hypothetical protein.)
genome : 48,592,144 - 48,595,851 (3,708)
query : 1 - 3,711 (3,711/3,711)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, extr 11, cyto 4, cyto_pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026442)
HIX0026442
HIT000306561
(
CR749551
)
(Conserved hypothetical protein.)
genome : 48,592,170 - 48,595,814 (3,645)
query : 1 - 3,645 (3,645/3,664)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, extr 11, cyto 4, cyto_pero 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026442)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : ENSPTRT00000057344
HIX0026442
HIT000707105 (
ENST00000595310
)
(Conserved hypothetical protein.)
genome : 48,592,170 - 48,595,814 (3,645)
query : 1 - 3,645 (3,645/3,645)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026442)
HIX0036878
HIT000383478
(
AB065872
)
Representative transcript
(Olfactory receptor 10AD1; Olfactory receptor OR12-1;)
genome : 48,595,922 - 48,597,275 (1,354)
query : 1 - 1,354 (1,354/1,354)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR000725 : Olfactory receptor
GO :
0004984 : Molecular Function : olfactory receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036878)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK138449
Bos
sp. (Cow) : ENSBTAT00000003874
Canis
sp. (Dog) : ENSCAFT00000039081
Monodelphis
sp. (Opossum) : XM_001367803
Rattus
sp. (Rat) : XM_235620
Pan
sp. (Chimpanzee) : XR_021748
HIX0036878
HIT000118639 (
ENST00000310248
)
(Olfactory receptor 10AD1; Olfactory receptor OR12-1;)
genome : 48,596,081 - 48,597,170 (1,090)
query : 1 - 1,090 (1,090/1,090)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036878)
HIX0036878
HIT000500748
(
BC136757
)
(Olfactory receptor 10AD1; Olfactory receptor OR12-1;)
genome : 48,596,081 - 48,597,170 (1,090)
query : 1 - 1,090 (1,090/1,090)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR000725 : Olfactory receptor
GO :
0004984 : Molecular Function : olfactory receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036878)
HIX0036878
HIT000500749
(
BC136758
)
(Olfactory receptor 10AD1; Olfactory receptor OR12-1;)
genome : 48,596,081 - 48,597,170 (1,090)
query : 1 - 1,090 (1,090/1,090)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR000725 : Olfactory receptor
GO :
0004984 : Molecular Function : olfactory receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036878)
HIX0036878
HIT000315821 (
NM_001004134
)
(Olfactory receptor 10AD1; Olfactory receptor OR12-1;)
genome : 48,596,122 - 48,597,075 (954)
query : 1 - 954 (954/954)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036878)
HIX0220285
HIT000661648 (
ENST00000547523
)
(Conserved hypothetical protein.)
genome : 48,624,881 - 48,677,993 (53,113)
query : 1 - 566 (566/566)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 8, cyto_nucl 8, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220285)
HIX0036674
HIT000129317 (
ENST00000335017
)
(Testis-specific H1 histone; Haploid germ cell-specific nuclear protein 1; Histone H1t2;)
genome : 48,722,763 - 48,724,062 (1,300)
query : 1 - 1,300 (1,300/1,300)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036674)
HIX0036674
HIT000251538
(
AY302593
)
Representative transcript
(Testis-specific H1 histone; Haploid germ cell-specific nuclear protein 1; Histone H1t2;)
genome : 48,722,763 - 48,724,062 (1,300)
query : 1 - 1,300 (1,300/1,300)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036674)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AY496853
Rattus
sp. (Rat) : BC085950
Bos
sp. (Cow) : BC110200
Pongo
sp. (Orangutan) : ENSPPYT00000005289
Macaca
sp. (Macaque) : XM_001101660
Pan
sp. (Chimpanzee) : XM_001160555
Monodelphis
sp. (Opossum) : XM_001375289
Canis
sp. (Dog) : XM_846542
HIX0036674
HIT000318494 (
NM_181788
)
(Testis-specific H1 histone; Haploid germ cell-specific nuclear protein 1; Histone H1t2;)
genome : 48,722,763 - 48,724,062 (1,300)
query : 1 - 1,300 (1,300/1,300)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036674)
HIX0036674
HIT000388100
(
BC119787
)
(Testis-specific H1 histone; Haploid germ cell-specific nuclear protein 1; Histone H1t2;)
genome : 48,722,813 - 48,723,989 (1,177)
query : 1 - 1,177 (1,177/1,177)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036674)
HIX0036674
HIT000387891
(
BC118635
)
(Testis-specific H1 histone; Haploid germ cell-specific nuclear protein 1; Histone H1t2;)
genome : 48,722,815 - 48,723,989 (1,175)
query : 1 - 1,175 (1,175/1,175)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036674)
HIX0036674
HIT000242408
(
AB121028
)
(Testis-specific H1 histone; Haploid germ cell-specific nuclear protein 1; Histone H1t2;)
genome : 48,723,123 - 48,724,062 (940)
query : 1 - 940 (940/950)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19, cyto_nucl 12, mito 8, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036674)
HIX0219966
HIT000663536_17 (
ENST00000549699
)
(Hypothetical protein.)
genome : 48,727,538 - 48,727,684 (147)
query : 1 - 147 (147/147)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219966)
HIX0219966
HIT000619722_18 (
ENST00000520383
)
(Hypothetical protein.)
genome : 48,727,541 - 48,727,684 (144)
query : 1 - 144 (144/144)
1 exon
identity = 0.993
3'(0.993)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219966)
HIX0010584
HIT000047583
(
AK127710
)
(Conserved hypothetical protein.)
genome : 48,730,960 - 48,733,966 (3,007)
query : 1 - 3,007 (3,007/3,007)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22.5, extr_plas 13, mito 4, plas 2.5,
E.R._mito 2.5, mito_nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010584)
HIX0010584
HIT000011598
(
AK054984
)
(Conserved hypothetical protein.)
genome : 48,730,960 - 48,733,019 (2,060)
query : 1 - 2,058 (2,058/2,058)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22.5, extr_plas 13, mito 4, plas 2.5,
E.R._mito 2.5, mito_nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010584)
HIX0010584
HIT000026584
(
AL713659
)
(Zinc finger protein 641 isoform 3.)
genome : 48,733,910 - 48,737,219 (3,310)
query : 1 - 3,310 (3,310/3,454)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
InterPro :
IPR027775 : C2H2- zinc finger protein family
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006351 : Biological Process : transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010584)
HIX0010584
HIT000654980 (
NM_001172682
)
(Zinc finger protein 641 isoform 3.)
genome : 48,733,791 - 48,745,029 (11,239)
query : 1 - 4,277 (4,277/4,277)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010584)
HIX0010584
HIT000115762 (
ENST00000301042
)
(Zinc finger protein 641;)
genome : 48,733,791 - 48,744,674 (10,884)
query : 1 - 4,544 (4,544/4,544)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010584)
HIX0010584
HIT000213591 (
NM_152320
)
(Zinc finger protein 641;)
genome : 48,733,791 - 48,744,674 (10,884)
query : 1 - 4,544 (4,544/4,544)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010584)
HIX0010584
HIT000654979 (
NM_001172681
)
(Zinc finger protein 641 isoform 2.)
genome : 48,733,791 - 48,744,674 (10,884)
query : 1 - 4,371 (4,371/4,371)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 18.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010584)
HIX0010584
HIT000257886
(
AY842285
)
Representative transcript
(Zinc finger protein 641;)
genome : 48,733,910 - 48,744,554 (10,645)
query : 8 - 4,879 (4,872/4,906)
6 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000;0.999)5'
coverage = 0.999
InterPro :
IPR001909 : Krueppel-associated box
IPR027775 : C2H2- zinc finger protein family
GO :
0003676 : Molecular Function : nucleic acid binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005622 : Cellular Component : intracellular
0005634 : Cellular Component : nucleus
0006351 : Biological Process : transcription, DNA-templated
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010584)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK087530
Canis
sp. (Dog) : ENSCAFT00000014313
Equus
sp. (Horse) : ENSECAT00000024251
Pongo
sp. (Orangutan) : ENSPPYT00000005290
Rattus
sp. (Rat) : XM_001061309
Monodelphis
sp. (Opossum) : XM_001375308
Pan
sp. (Chimpanzee) : XM_509030
Bos
sp. (Cow) : XM_582187
HIX0010584
HIT000643162 (
ENST00000544117
)
(Zinc finger protein 641;)
genome : 48,733,910 - 48,744,554 (10,645)
query : 1 - 4,872 (4,872/4,872)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010584)
HIX0010584
HIT000012471
(
AK055857
)
(Zinc finger protein 641;)
genome : 48,735,912 - 48,744,002 (8,091)
query : 9 - 2,326 (2,318/2,326)
6 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000)5'
coverage = 0.997
InterPro :
IPR001909 : Krueppel-associated box
IPR027775 : C2H2- zinc finger protein family
GO :
0003676 : Molecular Function : nucleic acid binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005622 : Cellular Component : intracellular
0005634 : Cellular Component : nucleus
0006351 : Biological Process : transcription, DNA-templated
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010584)
HIX0010584
HIT000017607
(
AK092740
)
(Zinc finger protein 641 isoform 2.)
genome : 48,735,918 - 48,744,576 (8,659)
query : 1 - 2,844 (2,844/2,844)
6 exons
identity = 0.997
3'(0.999;1.000;1.000;1.000;1.000;0.992)5'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
GO :
0003676 : Molecular Function : nucleic acid binding
0005622 : Cellular Component : intracellular
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010584)
HIX0010584
HIT000492688
(
AK298064
)
(Zinc finger protein 641 isoform 3.)
genome : 48,736,204 - 48,745,021 (8,818)
query : 1 - 1,856 (1,856/1,856)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR027775 : C2H2- zinc finger protein family
GO :
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005634 : Cellular Component : nucleus
0006351 : Biological Process : transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010584)
HIX0010584
HIT000546862 (
ENST00000448928
)
(Zinc finger protein 641 isoform 3.)
genome : 48,736,204 - 48,745,021 (8,818)
query : 1 - 1,856 (1,856/1,856)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010584)
HIX0010584
HIT000038261
(
BC018090
)
(Zinc finger protein 641 isoform 2.)
genome : 48,736,346 - 48,744,674 (8,329)
query : 1 - 1,816 (1,816/1,832)
6 exons
identity = 0.997
3'(0.997;1.000;1.000;1.000;0.995;0.991)5'
coverage = 0.999
InterPro :
IPR001909 : Krueppel-associated box
IPR027775 : C2H2- zinc finger protein family
GO :
0003676 : Molecular Function : nucleic acid binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005622 : Cellular Component : intracellular
0005634 : Cellular Component : nucleus
0006351 : Biological Process : transcription, DNA-templated
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 18.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010584)
HIX0010584
HIT000661212 (
ENST00000547026
)
(Zinc finger protein 641 isoform 2.)
genome : 48,736,339 - 48,744,674 (8,336)
query : 1 - 1,823 (1,823/1,823)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29.5, cyto_nucl 18.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010584)
HIX0010584
HIT000663377 (
ENST00000549512
)
(Zinc finger protein 641 isoform 3.)
genome : 48,737,244 - 48,738,556 (1,313)
query : 1 - 442 (442/442)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 15, cyto 11, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010584)
HIX0010584
HIT000661079 (
ENST00000546874
)
(Zinc finger protein 641 isoform 2.)
genome : 48,738,204 - 48,739,150 (947)
query : 1 - 315 (315/315)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 15, nucl 7.5, extr 3, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010584)
HIX0010584
HIT000663035 (
ENST00000549125
)
(Zinc finger protein 641 isoform 3.)
genome : 48,738,434 - 48,741,899 (3,466)
query : 19 - 290 (272/290)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 0.938
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 10, nucl 8, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010584)
HIX0010584
HIT000067006
(
AF086127
)
(Zinc finger protein 641 isoform 2.)
genome : 48,738,949 - 48,739,668 (720)
query : 1 - 720 (720/729)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
InterPro :
IPR001909 : Krueppel-associated box
IPR027775 : C2H2- zinc finger protein family
GO :
0003676 : Molecular Function : nucleic acid binding
0003700 : Molecular Function : sequence-specific DNA binding transcription factor activity
0005622 : Cellular Component : intracellular
0005634 : Cellular Component : nucleus
0006351 : Biological Process : transcription, DNA-templated
0006355 : Biological Process : regulation of transcription, DNA-templated
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, mito 7, cyto_nucl 6.33333, nucl 5.5, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010584)
HIX0010584
HIT000662865 (
ENST00000548932
)
(Zinc finger protein 641 isoform 1.)
genome : 48,739,166 - 48,744,002 (4,837)
query : 9 - 575 (567/575)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 0.986
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 13.5, cyto 8, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010584)
HIX0010584
HIT000663956 (
ENST00000550181
)
(Zinc finger protein 641 isoform 2.)
genome : 48,739,211 - 48,745,197 (5,987)
query : 1 - 555 (555/555)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 8, nucl 6, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010584)
HIX0010584
HIT000664095 (
ENST00000550342
)
(Zinc finger protein 641 isoform 3.)
genome : 48,741,080 - 48,744,201 (3,122)
query : 1 - 556 (556/556)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto_nucl 7, cyto 6, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010584)
HIX0220323
HIT000662284 (
ENST00000548257
)
(Conserved hypothetical protein.)
genome : 48,744,728 - 48,836,194 (91,467)
query : 1 - 562 (562/562)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, nucl 12, cyto 6, mito_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220323)
HIX0220445
HIT000664169 (
ENST00000550421
)
(Conserved hypothetical protein.)
genome : 48,749,575 - 48,750,397 (823)
query : 1 - 823 (823/823)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220445)
HIX0026482
HIT000048968
(
AK129697
)
Representative transcript
(Hypothetical protein.)
genome : 48,759,909 - 48,761,738 (1,830)
query : 1 - 1,830 (1,830/1,830)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 9, cyto_nucl 9, nucl 7, cyto_mito 7, cyto 6.5,
cyto_pero 5.66667, mito 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026482)
HIX0026482
HIT000710693 (
ENST00000598930
)
(Conserved hypothetical protein.)
genome : 48,759,919 - 48,761,738 (1,820)
query : 1 - 1,820 (1,820/1,820)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, cyto_nucl 14.3333, cyto_plas 8.5, nucl 8,
extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026482)
HIX0220589
HIT000666610 (
ENST00000553218
)
(Conserved hypothetical protein.)
genome : 48,779,200 - 48,780,048 (849)
query : 1 - 849 (849/849)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_mito 9.16667, extr 9, cyto 9, mito 9,
cyto_nucl 7.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220589)
HIX0220316
HIT000662108 (
ENST00000548060
)
(Conserved hypothetical protein.)
genome : 48,788,293 - 48,789,175 (883)
query : 1 - 883 (883/883)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, lyso 3, nucl 1.5, cyto_nucl 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220316)
HIX0171746
HIT000519281 (
ENST00000421347
)
(Olfactory receptor family protein.)
genome : 48,835,813 - 48,836,730 (918)
query : 1 - 918 (918/918)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171746)
HIX0036822
HIT000110032 (
ENST00000266594
)
(Acidic leucine-rich nuclear phosphoprotein 32 family member D; Phosphoprotein 32-related protein 2; Tumorigenic protein pp32r2;)
genome : 48,866,448 - 48,866,843 (396)
query : 1 - 396 (396/396)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036822)
HIX0036822
HIT000204144 (
NM_012404
)
(Acidic leucine-rich nuclear phosphoprotein 32 family member D; Phosphoprotein 32-related protein 2; Tumorigenic protein pp32r2;)
genome : 48,866,448 - 48,866,843 (396)
query : 1 - 396 (396/396)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, mito 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036822)
HIX0036822
HIT000263294
(
BC069122
)
Representative transcript
(Acidic leucine-rich nuclear phosphoprotein 32 family member D; Phosphoprotein 32-related protein 2; Tumorigenic protein pp32r2;)
genome : 48,866,448 - 48,866,843 (396)
query : 1 - 396 (396/396)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR001611 : Leucine-rich repeat
GO :
0005515 : Molecular Function : protein binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036822)
Ortholog candidate ( ->
Evola
)
Oryzias
sp. (Medaka) : ENSORLT00000002332
Pongo
sp. (Orangutan) : ENSPPYT00000005292
Pan
sp. (Chimpanzee) : XR_024682
HIX0010585
HIT000213590 (
NM_152319
)
(Conserved hypothetical protein.)
genome : 48,876,286 - 48,890,296 (14,011)
query : 1 - 888 (888/904)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 10.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010585)
HIX0010585
HIT000119971 (
ENST00000314014
)
(Conserved hypothetical protein.)
genome : 48,876,286 - 48,890,295 (14,010)
query : 1 - 887 (887/887)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010585)
HIX0010585
HIT000041358
(
BC031670
)
Representative transcript
(Conserved hypothetical protein.)
genome : 48,877,023 - 48,890,166 (13,144)
query : 1 - 684 (684/714)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010585)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC099572
Bos
sp. (Cow) : BC102663
Pongo
sp. (Orangutan) : ENSPPYT00000005293
Rattus
sp. (Rat) : XM_001061653
Macaca
sp. (Macaque) : XM_001101754
Canis
sp. (Dog) : XM_846455
HIX0010585
HIT000662375 (
ENST00000548364
)
(Conserved hypothetical protein.)
genome : 48,877,023 - 48,890,169 (13,147)
query : 1 - 687 (687/687)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 15, cyto 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010585)
HIX0010585
HIT000251251
(
AY255793
)
(Conserved hypothetical protein.)
genome : 48,877,044 - 48,890,124 (13,081)
query : 1 - 621 (621/621)
8 exons
identity = 0.997
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.989;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 15, cyto 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010585)
HIX0010585
HIT000251252
(
AY255794
)
(Conserved hypothetical protein.)
genome : 48,877,044 - 48,890,124 (13,081)
query : 1 - 820 (820/820)
9 exons
identity = 0.995
5'(0.990;1.000;1.000;1.000;0.995;0.960;1.000;
0.994;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 17, cyto 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010585)
HIX0010585
HIT000361770 (
ENST00000380491
)
(Conserved hypothetical protein.)
genome : 48,877,044 - 48,890,124 (13,081)
query : 1 - 820 (820/820)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 18, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010585)
HIX0220507
HIT000665403 (
ENST00000551847
)
(Conserved hypothetical protein.)
genome : 48,877,070 - 48,894,744 (17,675)
query : 1 - 588 (588/588)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220507)
HIX0210768
HIT000662846 (
ENST00000548913
)
(Plectin/S10, N-terminal domain containing protein.)
genome : 48,881,608 - 48,882,283 (676)
query : 18 - 693 (676/693)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.975
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210768)
HIX0210768
HIT000597538 (
ENST00000494130
)
(Plectin/S10, N-terminal domain containing protein.)
genome : 48,881,729 - 48,882,191 (463)
query : 1 - 463 (463/463)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 28, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210768)
HIX0010585
HIT000663279 (
ENST00000549398
)
(Conserved hypothetical protein.)
genome : 48,884,595 - 48,890,169 (5,575)
query : 1 - 506 (506/506)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 18, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010585)
HIX0010585
HIT000664909 (
ENST00000551266
)
(Conserved hypothetical protein.)
genome : 48,886,677 - 48,890,169 (3,493)
query : 1 - 490 (490/490)
3 exons
identity = 0.986
5'(1.000;0.968;0.995)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, nucl 11, cyto_nucl 8, extr 5, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010585)
HIX0019298
HIT000012834
(
AK056220
)
Representative transcript
(Olfactory receptor 8S1.)
genome : 48,901,137 - 48,923,680 (22,544)
query : 1 - 2,208 (2,208/2,208)
2 exons
identity = 0.998
5'(0.989;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 4, cyto 4, cyto_nucl 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019298)
HIX0019298
HIT000665237 (
ENST00000551654
)
(Olfactory receptor 8S1.)
genome : 48,901,137 - 48,923,680 (22,544)
query : 1 - 2,209 (2,209/2,209)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 4, cyto 4, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019298)
HIX0019298
HIT000383271
(
AB065604
)
(Olfactory receptor 8S1.)
genome : 48,919,215 - 48,922,086 (2,872)
query : 1 - 2,869 (2,869/2,869)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
InterPro :
IPR000725 : Olfactory receptor
GO :
0004984 : Molecular Function : olfactory receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019298)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC128027
Canis
sp. (Dog) : ENSCAFT00000039197
Monodelphis
sp. (Opossum) : ENSMODT00000026912
Pongo
sp. (Orangutan) : ENSPPYT00000005294
Rattus
sp. (Rat) : NM_001000424
Macaca
sp. (Macaque) : XM_001097668
Equus
sp. (Horse) : XM_001491013
Gallus
sp. (Chicken) : XM_429054
Bos
sp. (Cow) : XM_581506
Pan
sp. (Chimpanzee) : XR_024680
HIX0019298
HIT000118623 (
ENST00000310194
)
(Olfactory receptor 8S1.)
genome : 48,919,415 - 48,921,886 (2,472)
query : 1 - 1,080 (1,080/1,080)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019298)
HIX0019298
HIT000316062 (
NM_001005203
)
(Olfactory receptor 8S1.)
genome : 48,919,415 - 48,921,886 (2,472)
query : 1 - 1,080 (1,080/1,080)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019298)
HIX0037230
HIT000383239
(
AB065555
)
Representative transcript
(Olfactory receptor 8S1.)
genome : 48,953,480 - 48,956,939 (3,460)
query : 1 - 3,460 (3,460/3,460)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR000725 : Olfactory receptor
GO :
0004984 : Molecular Function : olfactory receptor activity
0007186 : Biological Process : G-protein coupled receptor signaling pathway
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037230)
Ortholog candidate ( ->
Evola
)
Canis
sp. (Dog) : ENSCAFT00000014215
Pongo
sp. (Orangutan) : ENSPPYT00000005295
Rattus
sp. (Rat) : ENSRNOT00000055551
Macaca
sp. (Macaque) : XM_001102029
Equus
sp. (Horse) : XM_001491450
Pan
sp. (Chimpanzee) : XM_522372
Bos
sp. (Cow) : XM_865851
HIX0037230
HIT000125424 (
ENST00000328207
)
(Olfactory receptor 8S1.)
genome : 48,953,665 - 48,956,739 (3,075)
query : 1 - 936 (936/936)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037230)
HIX0036821
HIT000199204 (
NM_002289
)
(Alpha-lactalbumin; Lactose synthase B protein; Lysozyme-like protein 7; Precursor;)
genome : 48,961,467 - 48,963,829 (2,363)
query : 1 - 728 (728/742)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.4.1.22
KEGG pathway :
00052 : Galactose metabolism (37)
01100 : Metabolic pathways (1346)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036821)
HIX0036821
HIT000115764 (
ENST00000301046
)
(Alpha-lactalbumin; Lactose synthase B protein; Lysozyme-like protein 7; Precursor;)
genome : 48,961,467 - 48,963,829 (2,363)
query : 1 - 728 (728/728)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036821)
HIX0036821
HIT000191067
(
J00270
)
(Alpha-lactalbumin; Lactose synthase B protein; Lysozyme-like protein 7; Precursor;)
genome : 48,961,468 - 48,963,803 (2,336)
query : 1 - 701 (701/701)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000545 : Lactalbumin
IPR001916 : Glycoside hydrolase, family 22
IPR019799 : Glycoside hydrolase, family 22, conserved site
IPR023346 : Lysozyme-like domain
GO :
0004461 : Molecular Function : lactose synthase activity
0005509 : Molecular Function : calcium ion binding
0005989 : Biological Process : lactose biosynthetic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036821)
HIX0036821
HIT000263275
(
BC069103
)
Representative transcript
(Alpha-lactalbumin; Lactose synthase B protein; Lysozyme-like protein 7; Precursor;)
genome : 48,961,469 - 48,963,829 (2,361)
query : 1 - 726 (726/726)
4 exons
identity = 0.999
3'(0.997;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000545 : Lactalbumin
IPR001916 : Glycoside hydrolase, family 22
IPR019799 : Glycoside hydrolase, family 22, conserved site
IPR023346 : Lysozyme-like domain
GO :
0004461 : Molecular Function : lactose synthase activity
0005509 : Molecular Function : calcium ion binding
0005989 : Biological Process : lactose biosynthetic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036821)
Ortholog candidate ( ->
Evola
)
Canis
sp. (Dog) : AB035079
Mus
sp. (Mouse) : BC069916
Bos
sp. (Cow) : BC102173
Equus
sp. (Horse) : ENSECAT00000002494
Pongo
sp. (Orangutan) : ENSPPYT00000005296
Rattus
sp. (Rat) : V01251
Macaca
sp. (Macaque) : XM_001102116
Pan
sp. (Chimpanzee) : XM_001160401
Monodelphis
sp. (Opossum) : XM_001375407
HIX0036821
HIT000663644 (
ENST00000549817
)
(Alpha-lactalbumin; Lactose synthase B protein; Lysozyme-like protein 7; Precursor;)
genome : 48,961,471 - 48,963,849 (2,379)
query : 1 - 1,243 (1,243/1,243)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036821)
HIX0036821
HIT000340445
(
BC112316
)
(Alpha-lactalbumin; Lactose synthase B protein; Lysozyme-like protein 7; Precursor;)
genome : 48,961,610 - 48,963,825 (2,216)
query : 1 - 581 (581/581)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000545 : Lactalbumin
IPR001916 : Glycoside hydrolase, family 22
IPR019799 : Glycoside hydrolase, family 22, conserved site
IPR023346 : Lysozyme-like domain
GO :
0004461 : Molecular Function : lactose synthase activity
0005509 : Molecular Function : calcium ion binding
0005989 : Biological Process : lactose biosynthetic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036821)
HIX0036821
HIT000340447
(
BC112318
)
(Alpha-lactalbumin; Lactose synthase B protein; Lysozyme-like protein 7; Precursor;)
genome : 48,961,610 - 48,963,825 (2,216)
query : 1 - 581 (581/581)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000545 : Lactalbumin
IPR001916 : Glycoside hydrolase, family 22
IPR019799 : Glycoside hydrolase, family 22, conserved site
IPR023346 : Lysozyme-like domain
GO :
0004461 : Molecular Function : lactose synthase activity
0005509 : Molecular Function : calcium ion binding
0005989 : Biological Process : lactose biosynthetic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036821)
HIX0036821
HIT000268856
(
CR541987
)
(Alpha-lactalbumin; Lactose synthase B protein; Lysozyme-like protein 7; Precursor;)
genome : 48,961,740 - 48,963,803 (2,064)
query : 1 - 429 (429/429)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000545 : Lactalbumin
IPR001916 : Glycoside hydrolase, family 22
IPR019799 : Glycoside hydrolase, family 22, conserved site
IPR023346 : Lysozyme-like domain
GO :
0004461 : Molecular Function : lactose synthase activity
0005509 : Molecular Function : calcium ion binding
0005989 : Biological Process : lactose biosynthetic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036821)
HIX0036821
HIT000268886
(
CR542017
)
(Alpha-lactalbumin; Lactose synthase B protein; Lysozyme-like protein 7; Precursor;)
genome : 48,961,743 - 48,963,803 (2,061)
query : 1 - 426 (426/426)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR000545 : Lactalbumin
IPR001916 : Glycoside hydrolase, family 22
IPR019799 : Glycoside hydrolase, family 22, conserved site
IPR023346 : Lysozyme-like domain
GO :
0004461 : Molecular Function : lactose synthase activity
0005509 : Molecular Function : calcium ion binding
0005989 : Biological Process : lactose biosynthetic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036821)
HIX0192175
HIT000513909 (
ENST00000415975
)
(Conserved hypothetical protein.)
genome : 49,021,671 - 49,022,565 (895)
query : 1 - 895 (895/895)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11.5, extr_plas 8.5, mito_pero 5.33333, cyto 5,
E.R._mito 5, plas 4.5, pero 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0192175)
HIX0219808
HIT000029197
(
AL834467
)
Representative transcript
(Potential DNA-binding domain containing protein.)
genome : 49,047,184 - 49,073,476 (26,293)
query : 1 - 1,514 (1,514/1,589)
7 exons
identity = 0.997
3'(1.000;0.976;1.000;1.000;1.000;0.994;1.000)5'
coverage = 1.000
InterPro :
IPR025927 : Potential DNA-binding domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, mito 9, cyto_nucl 8, nucl 6, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219808)
HIX0219808
HIT000662185 (
ENST00000548147
)
(Potential DNA-binding domain containing protein.)
genome : 49,047,184 - 49,073,476 (26,293)
query : 1 - 1,514 (1,514/1,514)
7 exons
identity = 0.997
3'(1.000;0.976;1.000;1.000;1.000;0.994;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, mito 9, cyto_nucl 8, nucl 6, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219808)
HIX0219808
HIT000663333 (
ENST00000549463
)
(Conserved hypothetical protein.)
genome : 49,047,472 - 49,052,457 (4,986)
query : 1 - 650 (650/650)
3 exons
identity = 0.995
3'(1.000;0.976;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 11.5, extr 11, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219808)
HIX0219808
HIT000662667 (
ENST00000548701
)
(Potential DNA-binding domain containing protein.)
genome : 49,047,493 - 49,056,375 (8,883)
query : 1 - 922 (922/922)
5 exons
identity = 0.992
3'(1.000;0.976;1.000;0.925;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 9.5, cyto_nucl 9, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219808)
HIX0219808
HIT000661261 (
ENST00000547087
)
(Potential DNA-binding domain containing protein.)
genome : 49,047,617 - 49,063,008 (15,392)
query : 1 - 831 (831/831)
5 exons
identity = 0.996
3'(1.000;0.976;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto_nucl 7.83333, nucl 7, cyto_mito 4.83333,
cyto 4.5, mito 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219808)
HIX0079420
HIT000367243 (
NR_002968
)
(Non-protein coding transcript.)
genome : 49,048,165 - 49,048,301 (137)
query : 1 - 137 (137/137)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0079420)
HIX0079420
HIT000382989
(
AJ609443
)
Representative transcript
(Non-protein coding transcript.)
genome : 49,048,165 - 49,048,301 (137)
query : 1 - 137 (137/137)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0079420)
HIX0079420
HIT000506655 (
ENST00000408564
)
(Non-protein coding transcript.)
genome : 49,048,165 - 49,048,301 (137)
query : 1 - 137 (137/137)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0079420)
HIX0079420
HIT000658539 (
NR_031623
)
(Non-protein coding transcript.)
genome : 49,048,227 - 49,048,313 (87)
query : 1 - 87 (87/87)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0079420)
HIX0079418
HIT000367225 (
NR_002950
)
(Hypothetical short protein.)
genome : 49,050,431 - 49,050,565 (135)
query : 1 - 135 (135/135)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0079418)
HIX0079418
HIT000382972
(
AJ609426
)
Representative transcript
(Hypothetical short protein.)
genome : 49,050,431 - 49,050,565 (135)
query : 1 - 135 (135/135)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0079418)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : ENSBTAT00000040884
Canis
sp. (Dog) : ENSCAFT00000032803
Equus
sp. (Horse) : ENSECAT00000028023
Monodelphis
sp. (Opossum) : ENSMODT00000027588
Pan
sp. (Chimpanzee) : ENSPTRT00000052773
HIX0079418
HIT000469908 (
ENST00000383885
)
(Hypothetical short protein.)
genome : 49,050,431 - 49,050,565 (135)
query : 1 - 135 (135/135)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0079418)
HIX0079419
HIT000367226 (
NR_002951
)
(Non-protein coding transcript.)
genome : 49,061,240 - 49,061,376 (137)
query : 1 - 137 (137/137)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0079419)
HIX0079419
HIT000382973
(
AJ609427
)
Representative transcript
(Non-protein coding transcript.)
genome : 49,061,240 - 49,061,376 (137)
query : 1 - 137 (137/137)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0079419)
HIX0079419
HIT000470579 (
ENST00000384583
)
(Non-protein coding transcript.)
genome : 49,061,240 - 49,061,376 (137)
query : 1 - 137 (137/137)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0079419)
HIX0219808
HIT000661660 (
ENST00000547536
)
(Conserved hypothetical protein.)
genome : 49,065,641 - 49,073,841 (8,201)
query : 1 - 509 (509/509)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, mito 5, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219808)
HIX0220048
HIT000662281 (
ENST00000548254
)
(Potential DNA-binding domain containing protein.)
genome : 49,075,007 - 49,076,019 (1,013)
query : 1 - 468 (468/468)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 14, mito 9, cyto_nucl 7, extr_plas 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220048)
HIX0220048
HIT000662322 (
ENST00000548304
)
(KAT8 regulatory NSL complex subunit 2 family protein.)
genome : 49,075,207 - 49,075,856 (650)
query : 25 - 343 (319/343)
2 exons
identity = 0.988
3'(0.987;0.989)5'
coverage = 0.930
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, mito 5, cyto_nucl 4.5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220048)
HIX0201918
HIT000054300
(
BX537514
)
(Conserved hypothetical protein.)
genome : 49,082,250 - 49,086,290 (4,041)
query : 1 - 4,042 (4,042/4,158)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201918)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK052836
HIX0201918
HIT000026995
(
AL832083
)
(Hypothetical short protein.)
genome : 49,082,245 - 49,085,951 (3,707)
query : 1 - 3,709 (3,709/3,810)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12, mito 12, cyto_mito 12
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201918)
HIX0201918
HIT000198235 (
NM_001240
)
(Cyclin-T1; CycT1; Cyclin-T;)
genome : 49,082,241 - 49,110,781 (28,541)
query : 1 - 7,079 (7,079/7,093)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 18.5, cyto 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201918)
HIX0201918
HIT000725444 (
NM_001277842
)
(Cyclin-T1 isoform b.)
genome : 49,082,241 - 49,110,781 (28,541)
query : 1 - 6,915 (6,915/6,915)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, extr 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201918)
HIX0201918
HIT000004559
(
AK002085
)
(Hypothetical protein.)
genome : 49,082,246 - 49,084,553 (2,308)
query : 1 - 2,309 (2,309/2,309)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201918)
HIX0201918
HIT000108186 (
ENST00000261900
)
(Cyclin-T1; CycT1; Cyclin-T;)
genome : 49,082,247 - 49,110,681 (28,435)
query : 1 - 6,973 (6,973/6,973)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 18.5, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201918)
HIX0201918
HIT000054301
(
BX537516
)
(Hypothetical protein.)
genome : 49,082,616 - 49,086,165 (3,550)
query : 1 - 3,550 (3,550/3,576)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201918)
HIX0201918
HIT000064152
(
AF048730
)
(Cyclin-T1; CycT1; Cyclin-T;)
genome : 49,086,691 - 49,110,502 (23,812)
query : 1 - 2,349 (2,349/2,360)
9 exons
identity = 0.989
3'(0.985;1.000;1.000;1.000;1.000;1.000;1.000;
0.988;0.995)5'
coverage = 0.995
InterPro :
IPR006671 : Cyclin, N-terminal
IPR013763 : Cyclin-like
IPR015429 : Cyclin C/H/T/L
IPR028863 : Cyclin-T1
GO :
0000079 : Biological Process : regulation of cyclin-dependent protein serine/threonine kinase activity
0006351 : Biological Process : transcription, DNA-templated
0006355 : Biological Process : regulation of transcription, DNA-templated
0019901 : Molecular Function : protein kinase binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 18.5, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201918)
HIX0201918
HIT000423787
(
AK290990
)
(Cyclin-T1; CycT1; Cyclin-T;)
genome : 49,086,816 - 49,110,681 (23,866)
query : 1 - 2,404 (2,404/2,404)
9 exons
identity = 0.999
3'(0.999;0.986;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR006671 : Cyclin, N-terminal
IPR013763 : Cyclin-like
IPR015429 : Cyclin C/H/T/L
IPR028863 : Cyclin-T1
GO :
0000079 : Biological Process : regulation of cyclin-dependent protein serine/threonine kinase activity
0006351 : Biological Process : transcription, DNA-templated
0006355 : Biological Process : regulation of transcription, DNA-templated
0019901 : Molecular Function : protein kinase binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24.5, cyto_nucl 17.5, cyto 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201918)
HIX0201918
HIT000063975
(
AF045161
)
Representative transcript
(Cyclin-T1; CycT1; Cyclin-T;)
genome : 49,086,816 - 49,110,458 (23,643)
query : 1 - 2,181 (2,181/2,181)
9 exons
identity = 1.000
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR006671 : Cyclin, N-terminal
IPR013763 : Cyclin-like
IPR015429 : Cyclin C/H/T/L
IPR028863 : Cyclin-T1
GO :
0000079 : Biological Process : regulation of cyclin-dependent protein serine/threonine kinase activity
0006351 : Biological Process : transcription, DNA-templated
0006355 : Biological Process : regulation of transcription, DNA-templated
0019901 : Molecular Function : protein kinase binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, cyto_nucl 18.5, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201918)
Ortholog candidate ( ->
Evola
)
Equus
sp. (Horse) : AF137509
Pan
sp. (Chimpanzee) : AF520776
Mus
sp. (Mouse) : AK133168
Bos
sp. (Cow) : AY428555
Danio
sp. (Zebrafish) : BC048886
Danio
sp. (Zebrafish) : BC057477
Monodelphis
sp. (Opossum) : ENSMODT00000026920
Oryzias
sp. (Medaka) : ENSORLT00000020653
Pongo
sp. (Orangutan) : ENSPPYT00000005299
Rattus
sp. (Rat) : ENSRNOT00000015376
Tetraodon
sp. (Tetraodon) : GSTENT00007616001
Takifugu
sp. (Fugu) : SINFRUT00000150136
Macaca
sp. (Macaque) : XM_001102295
Canis
sp. (Dog) : XM_543690
HIX0201918
HIT000469826
(
EF688064
)
(Cyclin-T1; CycT1; Cyclin-T;)
genome : 49,086,816 - 49,110,458 (23,643)
query : 1 - 2,017 (2,017/2,017)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
InterPro :
IPR006671 : Cyclin, N-terminal
IPR013763 : Cyclin-like
IPR015429 : Cyclin C/H/T/L
IPR028863 : Cyclin-T1
GO :
0000079 : Biological Process : regulation of cyclin-dependent protein serine/threonine kinase activity
0006351 : Biological Process : transcription, DNA-templated
0006355 : Biological Process : regulation of transcription, DNA-templated
0019901 : Molecular Function : protein kinase binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, extr 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201918)
HIX0201918
HIT000515278 (
ENST00000417344
)
(Cyclin-T1; CycT1; Cyclin-T;)
genome : 49,086,816 - 49,110,458 (23,643)
query : 1 - 2,017 (2,017/2,017)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 26, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201918)
HIX0201918
HIT000665531 (
ENST00000551989
)
(Cyclin-T1; CycT1; Cyclin-T;)
genome : 49,087,713 - 49,089,760 (2,048)
query : 1 - 726 (726/726)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201918)
HIX0201918
HIT000664201 (
ENST00000550457
)
(Cyclin-T1; CycT1; Cyclin-T;)
genome : 49,099,407 - 49,108,303 (8,897)
query : 1 - 351 (351/351)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto 11.5, cyto_nucl 8, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201918)
HIX0026374
HIT000050276
(
AK131005
)
(Conserved hypothetical protein.)
genome : 49,121,218 - 49,159,569 (38,352)
query : 1 - 573 (573/573)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 10.5, mito 10, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026374)
HIX0026374
HIT000657932 (
NR_029449
)
(Conserved hypothetical protein.)
genome : 49,121,218 - 49,159,569 (38,352)
query : 1 - 573 (573/573)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 10.5, mito 10, nucl 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026374)
HIX0026374
HIT000662389 (
ENST00000548380
)
(Conserved hypothetical protein.)
genome : 49,121,218 - 49,159,569 (38,352)
query : 1 - 573 (573/573)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 10.5, mito 10, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026374)
HIX0026374
HIT000657931 (
NR_029448
)
(Conserved hypothetical protein.)
genome : 49,121,218 - 49,159,568 (38,351)
query : 1 - 657 (657/657)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, extr 6, cyto_nucl 6, nucl 5, cyto 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026374)
HIX0026374
HIT000259461
(
BC054859
)
Representative transcript
(Conserved hypothetical protein.)
genome : 49,121,240 - 49,159,568 (38,329)
query : 5 - 639 (635/665)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.992
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, extr 6, cyto_nucl 6, nucl 5, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026374)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC048564
Bos
sp. (Cow) : BC111621
Equus
sp. (Horse) : ENSECAT00000021818
Macaca
sp. (Macaque) : XM_001098146
Pan
sp. (Chimpanzee) : XM_001160116
Rattus
sp. (Rat) : XM_217031
Canis
sp. (Dog) : XM_534820
HIX0026374
HIT000503127
(
BC146870
)
(Conserved hypothetical protein.)
genome : 49,121,236 - 49,159,521 (38,286)
query : 1 - 507 (507/507)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 10.5, mito 10, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026374)
HIX0026374
HIT000503134
(
BC146877
)
(Conserved hypothetical protein.)
genome : 49,121,236 - 49,159,521 (38,286)
query : 1 - 507 (507/507)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 10.5, mito 10, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026374)
HIX0026374
HIT000662103 (
ENST00000548054
)
(Conserved hypothetical protein.)
genome : 49,121,240 - 49,159,568 (38,329)
query : 1 - 635 (635/635)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, extr 6, cyto_nucl 6, nucl 5, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026374)
HIX0026374
HIT000094229
(
BC036043
)
(Conserved hypothetical protein.)
genome : 49,121,243 - 49,159,570 (38,328)
query : 1 - 549 (549/586)
4 exons
identity = 0.998
5'(0.990;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 10.5, mito 10, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026374)
HIX0022558
HIT000008189
(
AK024915
)
Representative transcript
(Conserved hypothetical protein.)
genome : 49,136,243 - 49,178,023 (41,781)
query : 19 - 1,720 (1,702/1,736)
4 exons
identity = 0.981
5'(0.855;0.972;0.992;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 5, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0022558)
HIX0010771
HIT000054449
(
BX537664
)
(Adenylate cyclase type 6; EC=4.6.1.1; ATP pyrophosphate-lyase 6; Adenylate cyclase type VI; Adenylyl cyclase 6; Ca(2+)-inhibitable adenylyl cyclase;)
genome : 49,159,977 - 49,168,279 (8,303)
query : 1 - 4,758 (4,758/4,781)
7 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;0.994;0.998)5'
coverage = 0.999
EC number :
EC 4.6.1.1
KEGG pathway :
00230 : Purine metabolism (100)
InterPro :
IPR001054 : Adenylyl cyclase class-3/4/guanylyl cyclase
GO :
0009190 : Biological Process : cyclic nucleotide biosynthetic process
0016849 : Molecular Function : phosphorus-oxygen lyase activity
0035556 : Biological Process : intracellular signal transduction
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010771)
HIX0010771
HIT000205374 (
NM_015270
)
(Adenylate cyclase type 6; EC=4.6.1.1; ATP pyrophosphate-lyase 6; Adenylate cyclase type VI; Adenylyl cyclase 6; Ca(2+)-inhibitable adenylyl cyclase;)
genome : 49,159,975 - 49,177,865 (17,891)
query : 13 - 6,566 (6,554/6,583)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 4.6.1.1
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010771)
HIX0010771
HIT000261631
(
BC064923
)
Representative transcript
(Adenylate cyclase type 6; EC=4.6.1.1; ATP pyrophosphate-lyase 6; Adenylate cyclase type VI; Adenylyl cyclase 6; Ca(2+)-inhibitable adenylyl cyclase;)
genome : 49,159,980 - 49,182,879 (22,900)
query : 1 - 6,018 (6,018/6,032)
23 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.999;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 4.6.1.1
KEGG pathway :
00230 : Purine metabolism (100)
InterPro :
IPR001054 : Adenylyl cyclase class-3/4/guanylyl cyclase
IPR009398 : Adenylate cyclase, conserved domain
IPR018297 : Adenylyl cyclase class-3/4/guanylyl cyclase, conserved site
GO :
0004016 : Molecular Function : adenylate cyclase activity
0009190 : Biological Process : cyclic nucleotide biosynthetic process
0016021 : Cellular Component : integral component of membrane
0016849 : Molecular Function : phosphorus-oxygen lyase activity
0035556 : Biological Process : intracellular signal transduction
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010771)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK147516
Macaca
sp. (Macaque) : DQ147966
Equus
sp. (Horse) : ENSECAT00000024201
Oryzias
sp. (Medaka) : ENSORLT00000008754
Pongo
sp. (Orangutan) : ENSPPYT00000005300
Tetraodon
sp. (Tetraodon) : GSTENT00028124001
Rattus
sp. (Rat) : L01115
Canis
sp. (Dog) : M94968
Takifugu
sp. (Fugu) : SINFRUT00000143879
Takifugu
sp. (Fugu) : SINFRUT00000161850
Danio
sp. (Zebrafish) : XM_001922714
Pan
sp. (Chimpanzee) : XM_509033
Bos
sp. (Cow) : XM_869639
Gallus
sp. (Chicken) : XR_026939
HIX0010771
HIT000311660 (
ENST00000357869
)
(Adenylate cyclase type 6; EC=4.6.1.1; ATP pyrophosphate-lyase 6; Adenylate cyclase type VI; Adenylyl cyclase 6; Ca(2+)-inhibitable adenylyl cyclase;)
genome : 49,159,975 - 49,177,865 (17,891)
query : 13 - 6,407 (6,395/6,407)
20 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 4.6.1.1
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010771)
HIX0010771
HIT000661414 (
ENST00000547260
)
(Adenylate cyclase type 6 isoform b.)
genome : 49,159,977 - 49,168,279 (8,303)
query : 1 - 4,758 (4,758/4,758)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 4.6.1.1
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010771)
HIX0220350
HIT000662701 (
ENST00000548742
)
(Hypothetical protein.)
genome : 49,159,977 - 49,161,106 (1,130)
query : 1 - 713 (713/713)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 12.5, cyto 7.5, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220350)
HIX0010771
HIT000000139
(
AB007882
)
(Adenylate cyclase type 6; EC=4.6.1.1; ATP pyrophosphate-lyase 6; Adenylate cyclase type VI; Adenylyl cyclase 6; Ca(2+)-inhibitable adenylyl cyclase;)
genome : 49,159,981 - 49,182,820 (22,840)
query : 1 - 5,877 (5,877/5,877)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 4.6.1.1
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010771)
HIX0010771
HIT000208142 (
NM_020983
)
(Adenylate cyclase type 6; EC=4.6.1.1; ATP pyrophosphate-lyase 6; Adenylate cyclase type VI; Adenylyl cyclase 6; Ca(2+)-inhibitable adenylyl cyclase;)
genome : 49,159,981 - 49,182,820 (22,840)
query : 1 - 5,877 (5,877/5,877)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 4.6.1.1
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010771)
HIX0010771
HIT000664170 (
ENST00000550422
)
(Adenylate cyclase type 6; EC=4.6.1.1; ATP pyrophosphate-lyase 6; Adenylate cyclase type VI; Adenylyl cyclase 6; Ca(2+)-inhibitable adenylyl cyclase;)
genome : 49,159,981 - 49,182,820 (22,840)
query : 1 - 5,877 (5,877/5,877)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 4.6.1.1
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010771)
HIX0010771
HIT000075010
(
AF250226
)
(Adenylate cyclase type 6; EC=4.6.1.1; ATP pyrophosphate-lyase 6; Adenylate cyclase type VI; Adenylyl cyclase 6; Ca(2+)-inhibitable adenylyl cyclase;)
genome : 49,160,112 - 49,177,912 (17,801)
query : 1 - 6,463 (6,463/6,463)
21 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;0.997)5'
coverage = 1.000
EC number :
EC 4.6.1.1
KEGG pathway :
00230 : Purine metabolism (100)
InterPro :
IPR001054 : Adenylyl cyclase class-3/4/guanylyl cyclase
IPR009398 : Adenylate cyclase, conserved domain
IPR018297 : Adenylyl cyclase class-3/4/guanylyl cyclase, conserved site
GO :
0004016 : Molecular Function : adenylate cyclase activity
0009190 : Biological Process : cyclic nucleotide biosynthetic process
0016021 : Cellular Component : integral component of membrane
0016849 : Molecular Function : phosphorus-oxygen lyase activity
0035556 : Biological Process : intracellular signal transduction
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010771)
HIX0010771
HIT000117783 (
ENST00000307885
)
(Adenylate cyclase type 6; EC=4.6.1.1; ATP pyrophosphate-lyase 6; Adenylate cyclase type VI; Adenylyl cyclase 6; Ca(2+)-inhibitable adenylyl cyclase;)
genome : 49,160,112 - 49,177,912 (17,801)
query : 1 - 6,464 (6,464/6,464)
21 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 4.6.1.1
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010771)
HIX0010771
HIT000489070
(
AK294446
)
(Adenylate cyclase type 6; EC=4.6.1.1; ATP pyrophosphate-lyase 6; Adenylate cyclase type VI; Adenylyl cyclase 6; Ca(2+)-inhibitable adenylyl cyclase;)
genome : 49,165,040 - 49,168,537 (3,498)
query : 1 - 1,694 (1,694/1,694)
6 exons
identity = 0.999
3'(1.000;1.000;1.000;0.997;1.000;1.000)5'
coverage = 1.000
EC number :
EC 4.6.1.1
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18, plas 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010771)
HIX0010771
HIT000665631 (
ENST00000552099
)
(Adenylate cyclase type 6 isoform b.)
genome : 49,165,040 - 49,168,537 (3,498)
query : 1 - 1,694 (1,694/1,694)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 4.6.1.1
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18, plas 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010771)
HIX0010771
HIT000662364 (
ENST00000548351
)
(Adenylate cyclase type 6; EC=4.6.1.1; ATP pyrophosphate-lyase 6; Adenylate cyclase type VI; Adenylyl cyclase 6; Ca(2+)-inhibitable adenylyl cyclase;)
genome : 49,165,526 - 49,167,807 (2,282)
query : 1 - 576 (576/576)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 4.6.1.1
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010771)
HIX0220100
HIT000694975 (
ENST00000583094
)
(Non-protein coding transcript.)
genome : 49,165,758 - 49,165,820 (63)
query : 1 - 63 (63/63)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220100)
HIX0220100
HIT000725913 (
NR_039850
)
(Non-protein coding transcript.)
genome : 49,165,758 - 49,165,820 (63)
query : 1 - 63 (63/63)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220100)
HIX0010771
HIT000665622 (
ENST00000552090
)
(Adenylate cyclase type 6; EC=4.6.1.1; ATP pyrophosphate-lyase 6; Adenylate cyclase type VI; Adenylyl cyclase 6; Ca(2+)-inhibitable adenylyl cyclase;)
genome : 49,167,726 - 49,170,267 (2,542)
query : 1 - 861 (861/861)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
EC number :
EC 4.6.1.1
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14, cyto_mito 9.83333, cyto_nucl 9.33333, plas 5,
mito 4.5, nucl 3.5, extr_plas 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010771)
HIX0010771
HIT000220880
(
U65474
)
(Adenylate cyclase type 6; EC=4.6.1.1; ATP pyrophosphate-lyase 6; Adenylate cyclase type VI; Adenylyl cyclase 6; Ca(2+)-inhibitable adenylyl cyclase;)
genome : 49,169,830 - 49,170,245 (416)
query : 1 - 222 (222/222)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 4.6.1.1
KEGG pathway :
00230 : Purine metabolism (100)
InterPro :
IPR001054 : Adenylyl cyclase class-3/4/guanylyl cyclase
GO :
0009190 : Biological Process : cyclic nucleotide biosynthetic process
0016849 : Molecular Function : phosphorus-oxygen lyase activity
0035556 : Biological Process : intracellular signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, cyto_nucl 11, extr 6, mito 6, nucl 4,
mito_pero 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010771)
HIX0010771
HIT000665050 (
ENST00000551435
)
(Adenylate cyclase type 6; EC=4.6.1.1; ATP pyrophosphate-lyase 6; Adenylate cyclase type VI; ACVI; Adenylyl cyclase 6; Ca(2+)-inhibitable adenylyl cyclase;)
genome : 49,170,077 - 49,171,968 (1,892)
query : 1 - 834 (834/834)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 4.6.1.1
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010771)
HIX0010771
HIT000384354
(
AK225224
)
(Adenylate cyclase type 6; EC=4.6.1.1; ATP pyrophosphate-lyase 6; Adenylate cyclase type VI; Adenylyl cyclase 6; Ca(2+)-inhibitable adenylyl cyclase;)
genome : 49,171,454 - 49,177,865 (6,412)
query : 16 - 1,743 (1,728/1,758)
3 exons
identity = 0.999
3'(1.000;1.000;0.999)5'
coverage = 1.000
EC number :
EC 4.6.1.1
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010771)
HIX0010771
HIT000662762 (
ENST00000548820
)
(Adenylate cyclase type 6; EC=4.6.1.1; ATP pyrophosphate-lyase 6; Adenylate cyclase type VI; Adenylyl cyclase 6; Ca(2+)-inhibitable adenylyl cyclase;)
genome : 49,171,455 - 49,172,207 (753)
query : 1 - 382 (382/382)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 4.6.1.1
KEGG pathway :
00230 : Purine metabolism (100)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010771)
HIX0129728
HIT000435904
(
BC150581
)
Representative transcript
(Conserved hypothetical protein.)
genome : 49,175,034 - 49,175,786 (753)
query : 13 - 766 (754/767)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 0.983
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18, cyto_nucl 9.5, cyto 7.5, nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0129728)
HIX0220033
HIT000661868 (
ENST00000547774
)
(Hypothetical short protein.)
genome : 49,182,930 - 49,184,318 (1,389)
query : 1 - 439 (439/439)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220033)
HIX0220033
HIT000663681 (
ENST00000549864
)
(Hypothetical short protein.)
genome : 49,183,359 - 49,184,318 (960)
query : 1 - 473 (473/473)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220033)
HIX0026358
HIT000661798 (
ENST00000547693
)
(Voltage-dependent L-type calcium channel subunit beta-3; CAB3; Calcium channel voltage-dependent subunit beta 3;)
genome : 49,207,577 - 49,217,767 (10,191)
query : 1 - 477 (477/477)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 6, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026358)
HIX0026358
HIT000657348 (
NM_001206917
)
(Voltage-dependent L-type calcium channel subunit beta-3 isoform 4.)
genome : 49,208,215 - 49,222,726 (14,512)
query : 1 - 2,576 (2,576/2,576)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 15, cyto 13
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026358)
HIX0026358
HIT000664142 (
ENST00000550391
)
(Voltage-dependent L-type calcium channel subunit beta-3 isoform 4.)
genome : 49,208,215 - 49,219,507 (11,293)
query : 1 - 754 (754/754)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22, cyto_nucl 16.5, nucl 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026358)
HIX0026358
HIT000499161
(
AK304537
)
(Voltage-dependent L-type calcium channel subunit beta-3 isoform 4.)
genome : 49,208,234 - 49,221,983 (13,750)
query : 1 - 1,815 (1,815/1,815)
13 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.950;1.000;
1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR000584 : Voltage-dependent calcium channel, L-type, beta subunit
IPR001452 : SH3 domain
IPR008079 : Voltage-dependent calcium channel, L-type, beta-3 subunit
IPR008145 : Guanylate kinase/L-type calcium channel beta subunit
GO :
0005245 : Molecular Function : voltage-gated calcium channel activity
0005515 : Molecular Function : protein binding
0005891 : Cellular Component : voltage-gated calcium channel complex
0070588 : Biological Process : calcium ion transmembrane transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 15, cyto 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026358)
HIX0026358
HIT000640035 (
ENST00000540990
)
(Voltage-dependent L-type calcium channel subunit beta-3 isoform 4.)
genome : 49,208,234 - 49,221,983 (13,750)
query : 1 - 1,814 (1,814/1,814)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto_nucl 15, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026358)
HIX0026358
HIT000495525
(
AK300901
)
(Voltage-dependent L-type calcium channel subunit beta-3 isoform 4.)
genome : 49,208,263 - 49,218,944 (10,682)
query : 1 - 929 (929/929)
5 exons
identity = 0.998
5'(1.000;0.992;0.992;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000584 : Voltage-dependent calcium channel, L-type, beta subunit
IPR001452 : SH3 domain
GO :
0005245 : Molecular Function : voltage-gated calcium channel activity
0005515 : Molecular Function : protein binding
0005891 : Cellular Component : voltage-gated calcium channel complex
0070588 : Biological Process : calcium ion transmembrane transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16.5, cyto_nucl 13.5, nucl 9.5, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026358)
HIX0026358
HIT000663120 (
ENST00000549226
)
(Voltage-dependent L-type calcium channel subunit beta-3 isoform 4.)
genome : 49,208,263 - 49,218,944 (10,682)
query : 1 - 929 (929/929)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 14.5, nucl 12, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026358)
HIX0026358
HIT000042784
(
AK122911
)
(Voltage-dependent L-type calcium channel subunit beta-3; CAB3; Calcium channel voltage-dependent subunit beta 3;)
genome : 49,208,676 - 49,222,724 (14,049)
query : 1 - 4,029 (4,029/4,029)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;0.992;1.000;1.000;1.000;
1.000;1.000;0.990;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000584 : Voltage-dependent calcium channel, L-type, beta subunit
IPR008079 : Voltage-dependent calcium channel, L-type, beta-3 subunit
IPR008145 : Guanylate kinase/L-type calcium channel beta subunit
GO :
0005245 : Molecular Function : voltage-gated calcium channel activity
0005515 : Molecular Function : protein binding
0005891 : Cellular Component : voltage-gated calcium channel complex
0070588 : Biological Process : calcium ion transmembrane transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 19, nucl 8, extr 2, cyto 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026358)
HIX0026358
HIT000662798 (
ENST00000548860
)
(Voltage-dependent L-type calcium channel subunit beta-3; CAB3; Calcium channel voltage-dependent subunit beta 3;)
genome : 49,208,676 - 49,222,724 (14,049)
query : 1 - 4,029 (4,029/4,029)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cysk 19, nucl 8, extr 2, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026358)
HIX0026358
HIT000657347 (
NM_001206916
)
(Voltage-dependent L-type calcium channel subunit beta-3; CAB3; Calcium channel voltage-dependent subunit beta 3;)
genome : 49,209,357 - 49,222,726 (13,370)
query : 1 - 2,609 (2,609/2,609)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15, cyto 7.5, golg 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026358)
HIX0026358
HIT000635232 (
ENST00000536187
)
(Voltage-dependent L-type calcium channel subunit beta-3; CAB3; Calcium channel voltage-dependent subunit beta 3;)
genome : 49,209,370 - 49,222,002 (12,633)
query : 1 - 1,872 (1,872/1,872)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15, cyto 7.5, golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026358)
HIX0026358
HIT000492263
(
AK297639
)
(Voltage-dependent L-type calcium channel subunit beta-3 isoform 3.)
genome : 49,209,370 - 49,221,891 (12,522)
query : 1 - 1,761 (1,761/1,761)
13 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.983;0.991;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR000584 : Voltage-dependent calcium channel, L-type, beta subunit
IPR001452 : SH3 domain
IPR008079 : Voltage-dependent calcium channel, L-type, beta-3 subunit
IPR008145 : Guanylate kinase/L-type calcium channel beta subunit
GO :
0005245 : Molecular Function : voltage-gated calcium channel activity
0005515 : Molecular Function : protein binding
0005891 : Cellular Component : voltage-gated calcium channel complex
0070588 : Biological Process : calcium ion transmembrane transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15, cyto 7.5, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026358)
HIX0026358
HIT000499936
(
AK316323
)
(Voltage-dependent L-type calcium channel subunit beta-3 isoform 3.)
genome : 49,209,374 - 49,222,002 (12,629)
query : 1 - 1,868 (1,868/1,868)
13 exons
identity = 0.999
5'(1.000;1.000;1.000;0.991;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR000584 : Voltage-dependent calcium channel, L-type, beta subunit
IPR001452 : SH3 domain
IPR008079 : Voltage-dependent calcium channel, L-type, beta-3 subunit
IPR008145 : Guanylate kinase/L-type calcium channel beta subunit
GO :
0005245 : Molecular Function : voltage-gated calcium channel activity
0005515 : Molecular Function : protein binding
0005891 : Cellular Component : voltage-gated calcium channel complex
0070588 : Biological Process : calcium ion transmembrane transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 15, cyto 7.5, golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026358)
HIX0026358
HIT000662811 (
ENST00000548874
)
(Voltage-dependent L-type calcium channel subunit beta-3 isoform 3.)
genome : 49,209,374 - 49,219,267 (9,894)
query : 1 - 581 (581/581)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 15.5, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026358)
HIX0026358
HIT000665290 (
ENST00000551716
)
(Voltage-dependent L-type calcium channel subunit beta-3; CAB3; Calcium channel voltage-dependent subunit beta 3;)
genome : 49,209,383 - 49,217,755 (8,373)
query : 1 - 544 (544/544)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 15.5, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026358)
HIX0026358
HIT000663944 (
ENST00000550168
)
(Voltage-dependent L-type calcium channel subunit beta-3; CAB3; Calcium channel voltage-dependent subunit beta 3;)
genome : 49,209,385 - 49,218,516 (9,132)
query : 1 - 677 (677/677)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 11, nucl 9.5, cyto_nucl 8, cyto 5.5,
E.R._mito 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026358)
HIX0026358
HIT000665949 (
ENST00000552465
)
(Hypothetical short protein.)
genome : 49,209,395 - 49,211,095 (1,701)
query : 1 - 557 (557/557)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 13.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026358)
HIX0026358
HIT000663854 (
ENST00000550064
)
(Voltage-dependent L-type calcium channel subunit beta-3; CAB3; Calcium channel voltage-dependent subunit beta 3;)
genome : 49,211,649 - 49,219,503 (7,855)
query : 1 - 746 (746/746)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 14, nucl 9.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026358)
HIX0026358
HIT000665563 (
ENST00000552022
)
(Voltage-dependent L-type calcium channel subunit beta-3; CAB3; Calcium channel voltage-dependent subunit beta 3;)
genome : 49,212,169 - 49,218,516 (6,348)
query : 1 - 564 (564/564)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto 7.5, cyto_pero 5.33333,
cyto_nucl 4.66667
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026358)
HIX0026358
HIT000663769 (
ENST00000549971
)
(Voltage-dependent L-type calcium channel subunit beta-3; CAB3; Calcium channel voltage-dependent subunit beta 3;)
genome : 49,212,189 - 49,218,095 (5,907)
query : 1 - 549 (549/549)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 14, nucl 11.5, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026358)
HIX0026358
HIT000197743 (
NM_000725
)
(Voltage-dependent L-type calcium channel subunit beta-3; CAB3; Calcium channel voltage-dependent subunit beta 3;)
genome : 49,212,254 - 49,222,726 (10,473)
query : 1 - 2,958 (2,958/2,958)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, cyto 15, nucl 13
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026358)
HIX0026358
HIT000657346 (
NM_001206915
)
(Voltage-dependent L-type calcium channel subunit beta-3 isoform 2.)
genome : 49,212,254 - 49,222,726 (10,473)
query : 1 - 2,835 (2,835/2,835)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 16.5, cyto 6.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026358)
HIX0026358
HIT000661902 (
ENST00000547818
)
(Voltage-dependent L-type calcium channel subunit beta-3; CAB3; Calcium channel voltage-dependent subunit beta 3;)
genome : 49,212,267 - 49,220,301 (8,035)
query : 1 - 904 (904/904)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto_nucl 5.33333, nucl 5, extr 4,
cyto_pero 3.66667, cyto 3.5, pero 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026358)
HIX0026358
HIT000661531 (
ENST00000547392
)
(Voltage-dependent L-type calcium channel subunit beta-3 isoform 2.)
genome : 49,212,287 - 49,222,119 (9,833)
query : 1 - 2,237 (2,237/2,237)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16.5, cyto 16, nucl 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026358)
HIX0026358
HIT000052621
(
BC041811
)
Representative transcript
(Voltage-dependent L-type calcium channel subunit beta-3; CAB3; Calcium channel voltage-dependent subunit beta 3;)
genome : 49,212,514 - 49,222,724 (10,211)
query : 1 - 2,696 (2,696/2,712)
13 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;0.988;
1.000;1.000;1.000;1.000;0.993;0.999)3'
coverage = 1.000
InterPro :
IPR000584 : Voltage-dependent calcium channel, L-type, beta subunit
IPR001452 : SH3 domain
IPR008079 : Voltage-dependent calcium channel, L-type, beta-3 subunit
IPR008145 : Guanylate kinase/L-type calcium channel beta subunit
GO :
0005245 : Molecular Function : voltage-gated calcium channel activity
0005515 : Molecular Function : protein binding
0005891 : Cellular Component : voltage-gated calcium channel complex
0070588 : Biological Process : calcium ion transmembrane transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, cyto 15, nucl 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026358)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : AF174419
Danio
sp. (Zebrafish) : DQ372946
Oryzias
sp. (Medaka) : ENSORLT00000008726
Oryzias
sp. (Medaka) : ENSORLT00000015457
Pongo
sp. (Orangutan) : ENSPPYT00000005301
Tetraodon
sp. (Tetraodon) : GSTENT00029194001
Rattus
sp. (Rat) : M88751
Takifugu
sp. (Fugu) : SINFRUT00000127806
Mus
sp. (Mouse) : U20372
Macaca
sp. (Macaque) : XM_001103098
Monodelphis
sp. (Opossum) : XM_001364428
Equus
sp. (Horse) : XM_001504105
Pan
sp. (Chimpanzee) : XM_509034
Canis
sp. (Dog) : XM_543689
HIX0026358
HIT000115765 (
ENST00000301050
)
(Voltage-dependent L-type calcium channel subunit beta-3; CAB3; Calcium channel voltage-dependent subunit beta 3;)
genome : 49,212,514 - 49,222,724 (10,211)
query : 1 - 2,696 (2,696/2,696)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, cyto 15, nucl 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026358)
HIX0026358
HIT000662303 (
ENST00000548279
)
(Voltage-dependent L-type calcium channel subunit beta-3; CAB3; Calcium channel voltage-dependent subunit beta 3;)
genome : 49,212,570 - 49,218,480 (5,911)
query : 1 - 576 (576/576)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, cyto_nucl 13.5, nucl 10, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026358)
HIX0026358
HIT000664479 (
ENST00000550771
)
(Voltage-dependent L-type calcium channel subunit beta-3; CAB3; Calcium channel voltage-dependent subunit beta 3;)
genome : 49,212,576 - 49,217,744 (5,169)
query : 1 - 586 (586/586)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 11, nucl 10.5, cyto 10.5, extr 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026358)
HIX0026358
HIT000422506
(
AK289709
)
(Voltage-dependent L-type calcium channel subunit beta-3; CAB3; Calcium channel voltage-dependent subunit beta 3;)
genome : 49,212,587 - 49,222,276 (9,690)
query : 1 - 2,175 (2,175/2,175)
13 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR000584 : Voltage-dependent calcium channel, L-type, beta subunit
IPR001452 : SH3 domain
IPR008079 : Voltage-dependent calcium channel, L-type, beta-3 subunit
IPR008145 : Guanylate kinase/L-type calcium channel beta subunit
GO :
0005245 : Molecular Function : voltage-gated calcium channel activity
0005515 : Molecular Function : protein binding
0005891 : Cellular Component : voltage-gated calcium channel complex
0070588 : Biological Process : calcium ion transmembrane transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, cyto 15, nucl 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026358)
HIX0026358
HIT000323589
(
X76555
)
(Voltage-dependent L-type calcium channel subunit beta-3; CAB3; Calcium channel voltage-dependent subunit beta 3;)
genome : 49,212,675 - 49,221,801 (9,127)
query : 1 - 1,611 (1,611/1,611)
13 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.993)3'
coverage = 1.000
InterPro :
IPR000584 : Voltage-dependent calcium channel, L-type, beta subunit
IPR001452 : SH3 domain
IPR008079 : Voltage-dependent calcium channel, L-type, beta-3 subunit
IPR008145 : Guanylate kinase/L-type calcium channel beta subunit
GO :
0005245 : Molecular Function : voltage-gated calcium channel activity
0005515 : Molecular Function : protein binding
0005891 : Cellular Component : voltage-gated calcium channel complex
0070588 : Biological Process : calcium ion transmembrane transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, cyto 15, nucl 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026358)
HIX0026358
HIT000217641
(
U07139
)
(Voltage-dependent L-type calcium channel subunit beta-3; CAB3; Calcium channel voltage-dependent subunit beta 3;)
genome : 49,212,679 - 49,222,724 (10,046)
query : 1 - 2,532 (2,532/2,532)
13 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR000584 : Voltage-dependent calcium channel, L-type, beta subunit
IPR001452 : SH3 domain
IPR008079 : Voltage-dependent calcium channel, L-type, beta-3 subunit
IPR008145 : Guanylate kinase/L-type calcium channel beta subunit
GO :
0005245 : Molecular Function : voltage-gated calcium channel activity
0005515 : Molecular Function : protein binding
0005891 : Cellular Component : voltage-gated calcium channel complex
0070588 : Biological Process : calcium ion transmembrane transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, cyto 15, nucl 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026358)
HIX0026358
HIT000365132
(
L27584
)
(Voltage-dependent L-type calcium channel subunit beta-3; CAB3; Calcium channel voltage-dependent subunit beta 3;)
genome : 49,212,694 - 49,221,922 (9,229)
query : 9 - 1,713 (1,705/1,717)
13 exons
identity = 0.983
5'(0.953;0.976;0.976;0.991;0.954;1.000;0.963;
1.000;1.000;1.000;0.969;0.993;0.984)3'
coverage = 0.993
InterPro :
IPR000584 : Voltage-dependent calcium channel, L-type, beta subunit
IPR001452 : SH3 domain
IPR008079 : Voltage-dependent calcium channel, L-type, beta-3 subunit
IPR008145 : Guanylate kinase/L-type calcium channel beta subunit
GO :
0005245 : Molecular Function : voltage-gated calcium channel activity
0005515 : Molecular Function : protein binding
0005891 : Cellular Component : voltage-gated calcium channel complex
0070588 : Biological Process : calcium ion transmembrane transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, cyto 15, nucl 13
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026358)
HIX0026358
HIT000323590
(
X76556
)
(Voltage-dependent L-type calcium channel subunit beta-3; CAB3; Calcium channel voltage-dependent subunit beta 3;)
genome : 49,212,686 - 49,221,554 (8,869)
query : 1 - 1,354 (1,354/1,392)
13 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;0.984)3'
coverage = 0.973
InterPro :
IPR000584 : Voltage-dependent calcium channel, L-type, beta subunit
IPR001452 : SH3 domain
IPR008079 : Voltage-dependent calcium channel, L-type, beta-3 subunit
IPR008145 : Guanylate kinase/L-type calcium channel beta subunit
GO :
0005245 : Molecular Function : voltage-gated calcium channel activity
0005515 : Molecular Function : protein binding
0005891 : Cellular Component : voltage-gated calcium channel complex
0070588 : Biological Process : calcium ion transmembrane transport
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, cyto 15.5, nucl 13.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026358)
HIX0026358
HIT000661388 (
ENST00000547230
)
(Voltage-dependent L-type calcium channel subunit beta-3; CAB3; Calcium channel voltage-dependent subunit beta 3;)
genome : 49,212,692 - 49,222,724 (10,033)
query : 1 - 2,395 (2,395/2,395)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23.5, cyto_nucl 16.5, cyto 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026358)
HIX0026358
HIT000665142 (
ENST00000551544
)
(Voltage-dependent L-type calcium channel subunit beta-3; CAB3; Calcium channel voltage-dependent subunit beta 3;)
genome : 49,212,692 - 49,222,724 (10,033)
query : 1 - 2,825 (2,825/2,825)
14 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 16, cyto 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026358)
HIX0036981
HIT000081586
(
AK074551
)
Representative transcript
(Conserved hypothetical protein.)
genome : 49,213,561 - 49,215,272 (1,712)
query : 1 - 1,713 (1,713/1,713)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 8.5, nucl 8, cyto 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036981)
HIX0036981
HIT000666248 (
ENST00000552812
)
(Conserved hypothetical protein.)
genome : 49,213,561 - 49,215,272 (1,712)
query : 1 - 1,712 (1,712/1,712)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto_nucl 8.5, nucl 8, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0036981)
HIX0026358
HIT000663965 (
ENST00000550190
)
(Voltage-dependent L-type calcium channel subunit beta-3; CAB3; Calcium channel voltage-dependent subunit beta 3;)
genome : 49,217,462 - 49,222,724 (5,263)
query : 20 - 424 (405/424)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.955
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 11, cyto_nucl 7.83333,
cyto_pero 6.33333, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026358)
HIX0026358
HIT000664224 (
ENST00000550483
)
(Voltage-dependent L-type calcium channel subunit beta-3; CAB3; Calcium channel voltage-dependent subunit beta 3;)
genome : 49,217,562 - 49,220,301 (2,740)
query : 1 - 730 (730/730)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto_nucl 9, nucl 8.5, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026358)
HIX0026358
HIT000665964 (
ENST00000552480
)
(Voltage-dependent L-type calcium channel subunit beta-3; CAB3; Calcium channel voltage-dependent subunit beta 3;)
genome : 49,218,898 - 49,221,651 (2,754)
query : 1 - 927 (927/927)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto_nucl 12.1667, cyto 6, cyto_pero 5.16667,
extr 4, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026358)
HIX0010589
HIT000201548 (
NM_004818
)
(Probable ATP-dependent RNA helicase DDX23; EC=3.6.4.13; 100 kDa U5 snRNP-specific protein; DEAD box protein 23; PRP28 homolog; U5-100kD;)
genome : 49,223,539 - 49,245,957 (22,419)
query : 1 - 3,267 (3,267/3,288)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.4.13
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010589)
HIX0010589
HIT000062820
(
AF026402
)
(Probable ATP-dependent RNA helicase DDX23; EC=3.6.4.13; 100 kDa U5 snRNP-specific protein; DEAD box protein 23; PRP28 homolog; U5-100kD;)
genome : 49,223,539 - 49,245,905 (22,367)
query : 1 - 3,216 (3,216/3,237)
17 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000;1.000;1.000;0.993;
1.000;0.993;0.991;1.000;1.000;1.000;0.989;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.4.13
InterPro :
IPR000629 : ATP-dependent RNA helicase DEAD-box, conserved site
IPR001650 : Helicase, C-terminal
IPR011545 : DEAD/DEAH box helicase domain
IPR014001 : Helicase superfamily 1/2, ATP-binding domain
IPR014014 : RNA helicase, DEAD-box type, Q motif
GO :
0003676 : Molecular Function : nucleic acid binding
0004386 : Molecular Function : helicase activity
0005524 : Molecular Function : ATP binding
0008026 : Molecular Function : ATP-dependent helicase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010589)
HIX0010589
HIT000030833
(
BC002366
)
(Probable ATP-dependent RNA helicase DDX23; EC=3.6.4.13; 100 kDa U5 snRNP-specific protein; DEAD box protein 23; PRP28 homolog; U5-100kD;)
genome : 49,223,548 - 49,245,916 (22,369)
query : 1 - 3,217 (3,217/3,235)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.4.13
InterPro :
IPR000629 : ATP-dependent RNA helicase DEAD-box, conserved site
IPR001650 : Helicase, C-terminal
IPR011545 : DEAD/DEAH box helicase domain
IPR014001 : Helicase superfamily 1/2, ATP-binding domain
IPR014014 : RNA helicase, DEAD-box type, Q motif
GO :
0003676 : Molecular Function : nucleic acid binding
0004386 : Molecular Function : helicase activity
0005524 : Molecular Function : ATP binding
0008026 : Molecular Function : ATP-dependent helicase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010589)
HIX0010589
HIT000048301
(
AK128428
)
Representative transcript
(Probable ATP-dependent RNA helicase DDX23; EC=3.6.4.13; 100 kDa U5 snRNP-specific protein; DEAD box protein 23; PRP28 homolog; U5-100kD;)
genome : 49,223,540 - 49,245,946 (22,407)
query : 1 - 3,196 (3,196/3,196)
17 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000;0.993;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.4.13
InterPro :
IPR000629 : ATP-dependent RNA helicase DEAD-box, conserved site
IPR001650 : Helicase, C-terminal
IPR011545 : DEAD/DEAH box helicase domain
IPR014001 : Helicase superfamily 1/2, ATP-binding domain
IPR014014 : RNA helicase, DEAD-box type, Q motif
GO :
0003676 : Molecular Function : nucleic acid binding
0004386 : Molecular Function : helicase activity
0005524 : Molecular Function : ATP binding
0008026 : Molecular Function : ATP-dependent helicase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010589)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ719804
Mus
sp. (Mouse) : BC049928
Danio
sp. (Zebrafish) : BC060524
Bos
sp. (Cow) : BC147902
Pongo
sp. (Orangutan) : CR858413
Monodelphis
sp. (Opossum) : ENSMODT00000012718
Oryzias
sp. (Medaka) : ENSORLT00000015435
Macaca
sp. (Macaque) : XM_001104339
Equus
sp. (Horse) : XM_001504119
Pan
sp. (Chimpanzee) : XM_509035
Canis
sp. (Dog) : XM_857900
HIX0010589
HIT000664538 (
ENST00000550834
)
(Probable ATP-dependent RNA helicase DDX23; EC=3.6.4.13; 100 kDa U5 snRNP-specific protein; DEAD box protein 23; PRP28 homolog; U5-100kD;)
genome : 49,223,840 - 49,231,865 (8,026)
query : 11 - 869 (859/869)
4 exons
identity = 0.994
3'(0.991;0.991;1.000;1.000)5'
coverage = 0.988
EC number :
EC 3.6.4.13
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 23, cyto_nucl 17.5, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010589)
HIX0010589
HIT000117825 (
ENST00000308025
)
(Probable ATP-dependent RNA helicase DDX23; EC=3.6.4.13; 100 kDa U5 snRNP-specific protein; DEAD box protein 23; PRP28 homolog; U5-100kD;)
genome : 49,223,963 - 49,245,946 (21,984)
query : 1 - 2,832 (2,832/2,832)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.4.13
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010589)
HIX0010589
HIT000425718
(
AK292921
)
(Probable ATP-dependent RNA helicase DDX23; EC=3.6.4.13; 100 kDa U5 snRNP-specific protein; DEAD box protein 23; PRP28 homolog; U5-100kD;)
genome : 49,223,963 - 49,245,946 (21,984)
query : 1 - 2,832 (2,832/2,832)
17 exons
identity = 0.999
3'(1.000;1.000;1.000;0.993;1.000;1.000;0.993;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.4.13
InterPro :
IPR000629 : ATP-dependent RNA helicase DEAD-box, conserved site
IPR001650 : Helicase, C-terminal
IPR011545 : DEAD/DEAH box helicase domain
IPR014001 : Helicase superfamily 1/2, ATP-binding domain
IPR014014 : RNA helicase, DEAD-box type, Q motif
GO :
0003676 : Molecular Function : nucleic acid binding
0004386 : Molecular Function : helicase activity
0005524 : Molecular Function : ATP binding
0008026 : Molecular Function : ATP-dependent helicase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010589)
HIX0010589
HIT000431245
(
AK312379
)
(Probable ATP-dependent RNA helicase DDX23; EC=3.6.4.13; 100 kDa U5 snRNP-specific protein; DEAD box protein 23; PRP28 homolog; U5-100kD;)
genome : 49,224,252 - 49,245,924 (21,673)
query : 3 - 2,523 (2,521/2,523)
17 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 0.999
EC number :
EC 3.6.4.13
InterPro :
IPR000629 : ATP-dependent RNA helicase DEAD-box, conserved site
IPR001650 : Helicase, C-terminal
IPR011545 : DEAD/DEAH box helicase domain
IPR014001 : Helicase superfamily 1/2, ATP-binding domain
IPR014014 : RNA helicase, DEAD-box type, Q motif
GO :
0003676 : Molecular Function : nucleic acid binding
0004386 : Molecular Function : helicase activity
0005524 : Molecular Function : ATP binding
0008026 : Molecular Function : ATP-dependent helicase activity
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010589)
HIX0010589
HIT000664965 (
ENST00000551331
)
(Conserved hypothetical protein.)
genome : 49,224,997 - 49,226,698 (1,702)
query : 1 - 706 (706/706)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, extr 11, nucl 3.5, cyto_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010589)
HIX0010589
HIT000663623 (
ENST00000549795
)
(Probable ATP-dependent RNA helicase DDX23; EC=3.6.4.13; 100 kDa U5 snRNP-specific protein; DEAD box protein 23; PRP28 homolog; U5-100kD;)
genome : 49,225,612 - 49,227,128 (1,517)
query : 1 - 579 (579/579)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.4.13
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 14, nucl 7.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010589)
HIX0010589
HIT000661922 (
ENST00000547842
)
(Probable ATP-dependent RNA helicase DDX23; EC=3.6.4.13; 100 kDa U5 snRNP-specific protein; DEAD box protein 23; PRP28 homolog; U5-100kD;)
genome : 49,225,786 - 49,226,603 (818)
query : 1 - 554 (554/554)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.4.13
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, extr 11, cyto_plas 7, nucl 4, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010589)
HIX0010589
HIT000666240 (
ENST00000552802
)
(Probable ATP-dependent RNA helicase DDX23; EC=3.6.4.13; 100 kDa U5 snRNP-specific protein; DEAD box protein 23; PRP28 homolog; U5-100kD;)
genome : 49,226,205 - 49,230,463 (4,259)
query : 1 - 926 (926/926)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.4.13
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28, cyto 2, mito 2, cyto_mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010589)
HIX0010589
HIT000661440 (
ENST00000547290
)
(Probable ATP-dependent RNA helicase DDX23; EC=3.6.4.13; 100 kDa U5 snRNP-specific protein; DEAD box protein 23; PRP28 homolog; U5-100kD;)
genome : 49,226,291 - 49,228,543 (2,253)
query : 1 - 750 (750/750)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.4.13
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010589)
HIX0010589
HIT000666475 (
ENST00000553065
)
(Probable ATP-dependent RNA helicase DDX23; EC=3.6.4.13; 100 kDa U5 snRNP-specific protein; DEAD box protein 23; PRP28 homolog; U5-100kD;)
genome : 49,226,306 - 49,227,344 (1,039)
query : 1 - 336 (336/336)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.4.13
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, cyto_nucl 15
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010589)
HIX0010589
HIT000489501
(
AK294877
)
(Probable ATP-dependent RNA helicase DDX23; EC=3.6.4.13; 100 kDa U5 snRNP-specific protein; DEAD box protein 23; PRP28 homolog; U5-100kD;)
genome : 49,228,241 - 49,245,924 (17,684)
query : 1 - 1,377 (1,377/1,377)
9 exons
identity = 0.999
3'(1.000;0.993;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.4.13
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010589)
HIX0010589
HIT000661303 (
ENST00000547135
)
(Probable ATP-dependent RNA helicase DDX23; EC=3.6.4.13; 100 kDa U5 snRNP-specific protein; DEAD box protein 23; PRP28 homolog; U5-100kD;)
genome : 49,228,241 - 49,245,924 (17,684)
query : 1 - 1,377 (1,377/1,377)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.4.13
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010589)
HIX0010589
HIT000661327 (
ENST00000547165
)
(Pre-mRNA-splicing ATP-dependent RNA helicase prp28; EC=3.6.4.13;)
genome : 49,229,959 - 49,231,844 (1,886)
query : 1 - 958 (958/958)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.4.13
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14, cyto 11, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010589)
HIX0010589
HIT000665604 (
ENST00000552069
)
(Probable ATP-dependent RNA helicase DDX23; EC=3.6.4.13; 100 kDa U5 snRNP-specific protein; DEAD box protein 23; PRP28 homolog; U5-100kD;)
genome : 49,230,425 - 49,231,115 (691)
query : 1 - 592 (592/592)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.4.13
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010589)
HIX0010589
HIT000664845 (
ENST00000551189
)
(Pre-mRNA-splicing ATP-dependent RNA helicase prp28; EC=3.6.4.13;)
genome : 49,230,555 - 49,231,483 (929)
query : 1 - 587 (587/587)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.4.13
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 16, cyto 12, extr 2, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010589)
HIX0010589
HIT000666580 (
ENST00000553182
)
(Probable ATP-dependent RNA helicase DDX23; EC=3.6.4.13; 100 kDa U5 snRNP-specific protein; DEAD box protein 23; PRP28 homolog; U5-100kD;)
genome : 49,231,075 - 49,245,924 (14,850)
query : 1 - 779 (779/779)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.4.13
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22.5, cyto_nucl 17, cyto 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010589)
HIX0010589
HIT000664764 (
ENST00000551098
)
(Probable ATP-dependent RNA helicase DDX23; EC=3.6.4.13; 100 kDa U5 snRNP-specific protein; DEAD box protein 23; PRP28 homolog; U5-100kD;)
genome : 49,231,316 - 49,245,921 (14,606)
query : 1 - 1,083 (1,083/1,083)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.4.13
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto_nucl 16.5, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010589)
HIX0010589
HIT000665991 (
ENST00000552512
)
(Probable ATP-dependent RNA helicase DDX23; EC=3.6.4.13; 100 kDa U5 snRNP-specific protein; DEAD box protein 23; PRP28 homolog; U5-100kD;)
genome : 49,231,798 - 49,245,924 (14,127)
query : 1 - 696 (696/696)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.4.13
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 16, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010589)
HIX0010589
HIT000665865 (
ENST00000552369
)
(Probable ATP-dependent RNA helicase DDX23; EC=3.6.4.13; 100 kDa U5 snRNP-specific protein; DEAD box protein 23; PRP28 homolog; U5-100kD;)
genome : 49,233,270 - 49,245,924 (12,655)
query : 1 - 603 (603/603)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.4.13
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 22, cyto_nucl 16, cyto 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010589)
HIX0010589
HIT000665080 (
ENST00000551468
)
(Probable ATP-dependent RNA helicase DDX23; EC=3.6.4.13; 100 kDa U5 snRNP-specific protein; DEAD box protein 23; PRP28 homolog; U5-100kD;)
genome : 49,233,796 - 49,245,924 (12,129)
query : 1 - 567 (567/567)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 3.6.4.13
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 15, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010589)
HIX0010589
HIT000666029 (
ENST00000552555
)
(Probable ATP-dependent RNA helicase DDX23; EC=3.6.4.13; 100 kDa U5 snRNP-specific protein; DEAD box protein 23; PRP28 homolog; U5-100kD;)
genome : 49,237,706 - 49,246,625 (8,920)
query : 1 - 554 (554/562)
3 exons
identity = 0.993
3'(0.969;1.000;1.000)5'
coverage = 0.986
EC number :
EC 3.6.4.13
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 23, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010589)
HIX0010770
HIT000040217
(
BC026356
)
Representative transcript
(Small GTPase superfamily protein.)
genome : 49,250,929 - 49,259,653 (8,725)
query : 1 - 1,652 (1,652/1,681)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR003578 : Small GTPase superfamily, Rho type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 6, mito 3, cyto_pero 3, cyto_plas 3,
cyto_golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010770)
HIX0010770
HIT000026301
(
AL359573
)
(Hypothetical protein.)
genome : 49,250,933 - 49,251,813 (881)
query : 1 - 881 (881/903)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto_nucl 12.3333, extr 10, cyto 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010770)
HIX0010770
HIT000204840 (
NM_014470
)
(Small GTPase superfamily protein.)
genome : 49,250,916 - 49,259,653 (8,738)
query : 1 - 1,665 (1,665/1,665)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 6, mito 3, cyto_pero 3, cyto_plas 3,
cyto_golg 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010770)
HIX0010770
HIT000118445 (
ENST00000309739
)
(Small GTPase superfamily protein.)
genome : 49,250,928 - 49,259,681 (8,754)
query : 1 - 1,681 (1,681/1,681)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 6, mito 3, cyto_pero 3, cyto_plas 3,
cyto_golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010770)
HIX0010770
HIT000664332 (
ENST00000550607
)
(Small GTPase superfamily protein.)
genome : 49,250,928 - 49,254,914 (3,987)
query : 1 - 552 (552/552)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, nucl 7, cyto 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010770)
HIX0010770
HIT000044161
(
AK124288
)
(Conserved hypothetical protein.)
genome : 49,250,930 - 49,253,065 (2,136)
query : 1 - 2,139 (2,139/2,139)
1 exon
identity = 0.994
3'(0.994)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 6, cyto 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010770)
HIX0010770
HIT000662442 (
ENST00000548445
)
(Conserved hypothetical protein.)
genome : 49,250,930 - 49,253,065 (2,136)
query : 1 - 2,136 (2,136/2,136)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, nucl 6, cyto 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010770)
HIX0010770
HIT000425559
(
AK292762
)
(Small GTPase superfamily protein.)
genome : 49,251,449 - 49,259,653 (8,205)
query : 1 - 1,132 (1,132/1,132)
5 exons
identity = 0.998
3'(0.998;1.000;0.991;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR003578 : Small GTPase superfamily, Rho type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 6, mito 3, cyto_pero 3, cyto_plas 3,
cyto_golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010770)
HIX0010770
HIT000059272
(
AB040147
)
(Small GTPase superfamily protein.)
genome : 49,251,566 - 49,259,631 (8,066)
query : 1 - 993 (993/993)
5 exons
identity = 0.997
3'(0.993;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR003578 : Small GTPase superfamily, Rho type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 6, mito 3, cyto_pero 3, cyto_plas 3,
cyto_golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010770)
HIX0010770
HIT000080904
(
AF498967
)
(Small GTPase superfamily protein.)
genome : 49,251,779 - 49,259,550 (7,772)
query : 1 - 699 (699/699)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR003578 : Small GTPase superfamily, Rho type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 6, mito 3, cyto_pero 3, cyto_plas 3,
cyto_golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010770)
HIX0010770
HIT000325372
(
Y07923
)
(Small GTPase superfamily protein.)
genome : 49,251,779 - 49,259,550 (7,772)
query : 1 - 699 (699/699)
5 exons
identity = 0.999
3'(1.000;1.000;0.991;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001806 : Small GTPase superfamily
IPR003578 : Small GTPase superfamily, Rho type
IPR005225 : Small GTP-binding protein domain
GO :
0005525 : Molecular Function : GTP binding
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto 6, mito 3, cyto_pero 3, cyto_plas 3,
cyto_golg 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010770)
HIX0010770
HIT000666642 (
ENST00000553260
)
(Small GTPase superfamily protein.)
genome : 49,251,880 - 49,255,993 (4,114)
query : 1 - 482 (482/482)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 5.66667, nucl 5.5, cyto 4.5,
cyto_pero 4.33333, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010770)
HIX0010770
HIT000664892 (
ENST00000551243
)
(Conserved hypothetical protein.)
genome : 49,254,813 - 49,259,638 (4,826)
query : 1 - 793 (793/793)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 7, extr_plas 7, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010770)
HIX0210760
HIT000593552 (
ENST00000489971
)
(Ribosomal protein L32e family protein.)
genome : 49,297,201 - 49,297,596 (396)
query : 1 - 396 (396/396)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, mito 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210760)
HIX0010592
HIT000110086 (
ENST00000266984
)
(Coiled-coil domain-containing protein 65.)
genome : 49,297,893 - 49,325,623 (27,731)
query : 1 - 2,084 (2,084/2,084)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_golg 10.5, nucl 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010592)
HIX0010592
HIT000211148 (
NM_033124
)
(Coiled-coil domain-containing protein 65; Testis development protein NYD-SP28;)
genome : 49,297,893 - 49,315,359 (17,467)
query : 1 - 1,815 (1,815/1,832)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, nucl 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010592)
HIX0010592
HIT000666364 (
ENST00000552942
)
(Coiled-coil domain-containing protein 65.)
genome : 49,297,902 - 49,315,200 (17,299)
query : 1 - 1,338 (1,338/1,338)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 15, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010592)
HIX0010592
HIT000496706
(
AK302082
)
(Coiled-coil domain-containing protein 65.)
genome : 49,297,916 - 49,315,353 (17,438)
query : 1 - 1,747 (1,747/1,747)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 14.5, nucl 3.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010592)
HIX0010592
HIT000661939 (
ENST00000547861
)
(Coiled-coil domain-containing protein 65.)
genome : 49,297,916 - 49,315,353 (17,438)
query : 1 - 1,746 (1,746/1,746)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 14.5, nucl 3.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010592)
HIX0010592
HIT000017918
(
AK093051
)
(Coiled-coil domain-containing protein 65; Testis development protein NYD-SP28;)
genome : 49,297,920 - 49,315,357 (17,438)
query : 1 - 1,787 (1,787/1,787)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;0.993;1.000;1.000;1.000;
0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010592)
HIX0010592
HIT000078707
(
AF382188
)
(Coiled-coil domain-containing protein 65; Testis development protein NYD-SP28;)
genome : 49,297,932 - 49,315,358 (17,427)
query : 5 - 1,779 (1,775/1,798)
8 exons
identity = 0.998
5'(0.997;1.000;1.000;0.993;0.995;1.000;1.000;
1.000)3'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010592)
HIX0010592
HIT000122453 (
ENST00000320516
)
(Coiled-coil domain-containing protein 65; Testis development protein NYD-SP28;)
genome : 49,297,932 - 49,315,358 (17,427)
query : 1 - 1,775 (1,775/1,775)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010592)
HIX0010592
HIT000433489
(
AK314623
)
(Coiled-coil domain-containing protein 65; Testis development protein NYD-SP28;)
genome : 49,297,948 - 49,315,226 (17,279)
query : 1 - 1,627 (1,627/1,627)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010592)
HIX0010592
HIT000052194
(
BC039317
)
Representative transcript
(Coiled-coil domain-containing protein 65; Testis development protein NYD-SP28;)
genome : 49,297,954 - 49,315,354 (17,401)
query : 1 - 1,749 (1,749/1,764)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010592)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB168851
Mus
sp. (Mouse) : AK077174
Danio
sp. (Zebrafish) : BC075992
Rattus
sp. (Rat) : BC083683
Bos
sp. (Cow) : BC111168
Canis
sp. (Dog) : ENSCAFT00000013993
Pongo
sp. (Orangutan) : ENSPPYT00000005304
Pan
sp. (Chimpanzee) : XM_001159795
Equus
sp. (Horse) : XM_001504130
HIX0010592
HIT000023359
(
AK098529
)
(Coiled-coil domain-containing protein 65.)
genome : 49,310,823 - 49,325,623 (14,801)
query : 1 - 1,317 (1,317/1,317)
6 exons
identity = 0.998
5'(1.000;1.000;0.995;1.000;1.000;0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24, cyto_nucl 15.8333, cyto_golg 13.5, nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010592)
HIX0010592
HIT000665708 (
ENST00000552188
)
(Coiled-coil domain-containing protein 65.)
genome : 49,311,927 - 49,314,746 (2,820)
query : 1 - 582 (582/582)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 13, nucl 6.5, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010592)
HIX0219783
HIT000328953
(
AB209018
)
(Peptidyl-prolyl cis-trans isomerase FKBP11 isoform 2.)
genome : 49,315,315 - 49,320,257 (4,943)
query : 1 - 4,945 (4,945/4,977)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
EC number :
EC 5.2.1.8
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, E.R. 5, plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219783)
HIX0219783
HIT000666441 (
ENST00000553027
)
(Peptidyl-prolyl cis-trans isomerase FKBP11 isoform 2.)
genome : 49,315,315 - 49,320,257 (4,943)
query : 1 - 4,943 (4,943/4,957)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
EC number :
EC 5.2.1.8
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, E.R. 5, plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219783)
HIX0219783
HIT000053319
(
BC048292
)
(Peptidyl-prolyl cis-trans isomerase FKBP11 isoform 3 precursor.)
genome : 49,315,744 - 49,319,293 (3,550)
query : 1 - 2,664 (2,664/2,790)
4 exons
identity = 0.998
3'(0.998;1.000;1.000;0.995)5'
coverage = 1.000
EC number :
EC 5.2.1.8
InterPro :
IPR001179 : Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain
IPR023566 : Peptidyl-prolyl cis-trans isomerase, FKBP-type
GO :
0006457 : Biological Process : protein folding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 27, lyso 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219783)
HIX0219783
HIT000040386
(
BC027973
)
(Peptidyl-prolyl cis-trans isomerase FKBP11; PPIase FKBP11; EC=5.2.1.8; 19 kDa FK506-binding protein; 19 kDa FKBP; FKBP-19; FK506-binding protein 11; FKBP-11; Rotamase; Precursor;)
genome : 49,315,751 - 49,319,282 (3,532)
query : 1 - 693 (693/734)
6 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.995)5'
coverage = 1.000
EC number :
EC 5.2.1.8
InterPro :
IPR001179 : Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain
IPR023566 : Peptidyl-prolyl cis-trans isomerase, FKBP-type
GO :
0006457 : Biological Process : protein folding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, E.R. 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219783)
HIX0219783
HIT000074765
(
AF238079
)
(Peptidyl-prolyl cis-trans isomerase FKBP11; PPIase FKBP11; EC=5.2.1.8; 19 kDa FK506-binding protein; 19 kDa FKBP; FKBP-19; FK506-binding protein 11; FKBP-11; Rotamase; Precursor;)
genome : 49,315,742 - 49,319,282 (3,541)
query : 1 - 703 (703/727)
6 exons
identity = 0.994
3'(1.000;1.000;1.000;1.000;1.000;0.980)5'
coverage = 1.000
EC number :
EC 5.2.1.8
InterPro :
IPR001179 : Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain
IPR023566 : Peptidyl-prolyl cis-trans isomerase, FKBP-type
GO :
0006457 : Biological Process : protein folding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, E.R. 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219783)
HIX0219783
HIT000019731
(
AK094876
)
(Peptidyl-prolyl cis-trans isomerase FKBP11 isoform 2.)
genome : 49,315,751 - 49,318,414 (2,664)
query : 1 - 2,360 (2,360/2,389)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 5.2.1.8
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, E.R. 5, plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219783)
HIX0219783
HIT000206265 (
NM_016594
)
(Peptidyl-prolyl cis-trans isomerase FKBP11; PPIase FKBP11; EC=5.2.1.8; 19 kDa FK506-binding protein; 19 kDa FKBP; FKBP-19; FK506-binding protein 11; FKBP-11; Rotamase; Precursor;)
genome : 49,315,742 - 49,319,330 (3,589)
query : 1 - 750 (750/767)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 5.2.1.8
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, E.R. 2, lyso 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219783)
HIX0219783
HIT000253042
(
AY358998
)
Representative transcript
(Peptidyl-prolyl cis-trans isomerase FKBP11; PPIase FKBP11; EC=5.2.1.8; 19 kDa FK506-binding protein; 19 kDa FKBP; FKBP-19; FK506-binding protein 11; FKBP-11; Rotamase; Precursor;)
genome : 49,315,742 - 49,319,288 (3,547)
query : 1 - 708 (708/725)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 5.2.1.8
InterPro :
IPR001179 : Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain
IPR023566 : Peptidyl-prolyl cis-trans isomerase, FKBP-type
GO :
0006457 : Biological Process : protein folding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, E.R. 2, lyso 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219783)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK003331
Rattus
sp. (Rat) : BC084709
Bos
sp. (Cow) : BC110165
Danio
sp. (Zebrafish) : BC154504
Tetraodon
sp. (Tetraodon) : CR715882
Canis
sp. (Dog) : ENSCAFT00000013968
Oryzias
sp. (Medaka) : ENSORLT00000001904
Pongo
sp. (Orangutan) : ENSPPYT00000005306
Takifugu
sp. (Fugu) : SINFRUT00000162636
Macaca
sp. (Macaque) : XM_001104575
Pan
sp. (Chimpanzee) : XM_001159891
Equus
sp. (Horse) : XM_001504132
HIX0219783
HIT000560831 (
NM_001143781
)
(Peptidyl-prolyl cis-trans isomerase FKBP11 isoform 2.)
genome : 49,315,742 - 49,318,664 (2,923)
query : 1 - 544 (544/561)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 5.2.1.8
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 16, cyto_mito 10.8333, cyto_nucl 9.83333, pero 5,
mito 4.5, nucl 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219783)
HIX0219783
HIT000664474 (
ENST00000550765
)
(Peptidyl-prolyl cis-trans isomerase FKBP11; PPIase FKBP11; EC=5.2.1.8; 19 kDa FK506-binding protein; 19 kDa FKBP; FKBP-19; FK506-binding protein 11; FKBP-11; Rotamase; Precursor;)
genome : 49,315,742 - 49,319,610 (3,869)
query : 1 - 1,030 (1,030/1,030)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 5.2.1.8
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, E.R. 2, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219783)
HIX0219783
HIT000542148 (
ENST00000444214
)
(Peptidyl-prolyl cis-trans isomerase FKBP11 isoform 2.)
genome : 49,315,742 - 49,318,750 (3,009)
query : 1 - 630 (630/630)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 5.2.1.8
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 16, cyto_mito 10.8333, cyto_nucl 9.83333, pero 5,
mito 4.5, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219783)
HIX0219783
HIT000664760 (
ENST00000551094
)
(Peptidyl-prolyl cis-trans isomerase FKBP11 isoform 2.)
genome : 49,315,742 - 49,318,512 (2,771)
query : 1 - 517 (517/517)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 5.2.1.8
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 23, nucl 4, plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219783)
HIX0219783
HIT000661054 (
ENST00000546847
)
(Peptidyl-prolyl cis-trans isomerase FKBP11 isoform 1 precursor.)
genome : 49,315,743 - 49,318,398 (2,656)
query : 1 - 524 (524/524)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 5.2.1.8
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 21, cyto_nucl 7, nucl 5.5, cyto 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219783)
HIX0219783
HIT000665270 (
ENST00000551694
)
(Peptidyl-prolyl cis-trans isomerase FKBP11 isoform 1 precursor.)
genome : 49,315,744 - 49,319,293 (3,550)
query : 1 - 2,661 (2,661/2,661)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 5.2.1.8
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, E.R. 5, plas 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219783)
HIX0219783
HIT000106983 (
ENST00000256680
)
(Peptidyl-prolyl cis-trans isomerase FKBP11 isoform 2.)
genome : 49,315,760 - 49,319,268 (3,509)
query : 1 - 725 (725/725)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 5.2.1.8
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 16, cyto_mito 10.8333, cyto_nucl 9.83333, pero 5,
mito 4.5, nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219783)
HIX0219783
HIT000666306 (
ENST00000552878
)
(Peptidyl-prolyl cis-trans isomerase FKBP11 isoform 3 precursor.)
genome : 49,316,565 - 49,319,294 (2,730)
query : 1 - 835 (835/835)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 5.2.1.8
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, lyso 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219783)
HIX0219783
HIT000560832 (
NM_001143782
)
(Peptidyl-prolyl cis-trans isomerase FKBP11 isoform 3 precursor.)
genome : 49,316,909 - 49,319,330 (2,422)
query : 1 - 986 (986/986)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 5.2.1.8
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, lyso 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219783)
HIX0219783
HIT000496079
(
AK301455
)
(Peptidyl-prolyl cis-trans isomerase FKBP11 isoform 3 precursor.)
genome : 49,316,909 - 49,319,303 (2,395)
query : 1 - 959 (959/959)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 5.2.1.8
InterPro :
IPR001179 : Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain
IPR023566 : Peptidyl-prolyl cis-trans isomerase, FKBP-type
GO :
0006457 : Biological Process : protein folding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, lyso 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219783)
HIX0219783
HIT000551106 (
ENST00000453172
)
(Peptidyl-prolyl cis-trans isomerase FKBP11 isoform 3 precursor.)
genome : 49,316,909 - 49,319,303 (2,395)
query : 1 - 959 (959/959)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 5.2.1.8
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 26, lyso 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219783)
HIX0219783
HIT000660889 (
ENST00000546671
)
(Peptidyl-prolyl cis-trans isomerase FKBP11 isoform 3 precursor.)
genome : 49,317,025 - 49,318,571 (1,547)
query : 1 - 873 (873/873)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 5.2.1.8
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11, cysk 10, cyto_nucl 8, extr 7, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219783)
HIX0219783
HIT000661878 (
ENST00000547789
)
(Peptidyl-prolyl cis-trans isomerase FKBP11 isoform 3 precursor.)
genome : 49,317,546 - 49,319,275 (1,730)
query : 1 - 482 (482/482)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 5.2.1.8
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219783)
HIX0219783
HIT000663002 (
ENST00000549084
)
(Conserved hypothetical protein.)
genome : 49,317,722 - 49,318,939 (1,218)
query : 1 - 517 (517/517)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 26, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219783)
HIX0219783
HIT000665371 (
ENST00000551807
)
(Peptidyl-prolyl cis-trans isomerase FKBP11 isoform 3 precursor.)
genome : 49,318,609 - 49,319,293 (685)
query : 1 - 508 (508/508)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
EC number :
EC 5.2.1.8
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219783)
HIX0026408
HIT000043357
(
AK123484
)
Representative transcript
(Conserved hypothetical protein.)
genome : 49,320,324 - 49,322,247 (1,924)
query : 1 - 1,926 (1,926/1,926)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, mito 4, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026408)
HIX0037026
HIT000088889
(
BC015999
)
Representative transcript
(Conserved hypothetical protein.)
genome : 49,326,073 - 49,327,245 (1,173)
query : 1 - 1,173 (1,173/1,199)
1 exon
identity = 0.995
3'(0.995)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 12.5, cyto_nucl 10.8333, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037026)
HIX0010590
HIT000106984 (
ENST00000256682
)
(Small GTPase superfamily, ARF/SAR type protein.)
genome : 49,329,506 - 49,351,334 (21,829)
query : 1 - 4,105 (4,105/4,105)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, mito 11, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010590)
HIX0010590
HIT000033352
(
BC007647
)
(ADP-ribosylation factor 3;)
genome : 49,329,992 - 49,351,207 (21,216)
query : 1 - 3,492 (3,492/3,518)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;0.996;1.000)5'
coverage = 1.000
InterPro :
IPR005225 : Small GTP-binding protein domain
IPR006689 : Small GTPase superfamily, ARF/SAR type
IPR024156 : Small GTPase superfamily, ARF type
GO :
0005525 : Molecular Function : GTP binding
0005622 : Cellular Component : intracellular
0007264 : Biological Process : small GTPase mediated signal transduction
SOSUI :