bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0010467
HIT000213312 (
NM_145792
)
(Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein family protein.)
genome : 16,500,076 - 16,517,344 (17,269)
query : 1 - 902 (902/919)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.18
KEGG pathway :
00480 : Glutathione metabolism (37)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 9.5, cyto 9, extr 8, mito 7, nucl 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010467)
HIX0010467
HIT000102211 (
ENST00000010404
)
(Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein family protein.)
genome : 16,500,076 - 16,517,343 (17,268)
query : 1 - 901 (901/901)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 9.5, cyto 9, extr 8, mito 7, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010467)
HIX0010467
HIT000635416 (
ENST00000536371
)
(Membrane associated eicosanoid/glutathione metabolism-like domain containing protein.)
genome : 16,500,076 - 16,510,633 (10,558)
query : 1 - 286 (286/298)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.960
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 10.5, mito 8, extr 6, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010467)
HIX0010467
HIT000260436
(
BC062473
)
(Hypothetical short protein.)
genome : 16,500,574 - 16,501,736 (1,163)
query : 1 - 1,163 (1,163/1,181)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14.5, extr 14, cyto_nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010467)
HIX0010467
HIT000724554 (
NM_001267598
)
(Membrane associated eicosanoid/glutathione metabolism-like domain containing protein.)
genome : 16,500,577 - 16,530,123 (29,547)
query : 1 - 1,379 (1,379/1,509)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.18
KEGG pathway :
00480 : Glutathione metabolism (37)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 8, cyto_nucl 8, extr 7, mito 7, cyto 6, pero 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010467)
HIX0010467
HIT000207840 (
NM_020300
)
(Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein family protein.)
genome : 16,500,577 - 16,517,344 (16,768)
query : 1 - 927 (927/944)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.18
KEGG pathway :
00480 : Glutathione metabolism (37)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 9.5, cyto 9, extr 8, mito 7, nucl 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010467)
HIX0010467
HIT000724346 (
NM_001260511
)
(Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein family protein.)
genome : 16,500,577 - 16,517,344 (16,768)
query : 1 - 920 (920/937)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.18
KEGG pathway :
00480 : Glutathione metabolism (37)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 9.5, cyto 9, extr 8, mito 7, nucl 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010467)
HIX0010467
HIT000724347 (
NM_001260512
)
(Membrane associated eicosanoid/glutathione metabolism-like domain containing protein.)
genome : 16,500,577 - 16,517,344 (16,768)
query : 1 - 1,071 (1,071/1,088)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.18
KEGG pathway :
00480 : Glutathione metabolism (37)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12, cyto_nucl 8.5, mito 8, extr 7, nucl 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010467)
HIX0010467
HIT000727104 (
NR_048545
)
(Membrane associated eicosanoid/glutathione metabolism-like domain containing protein.)
genome : 16,500,577 - 16,517,344 (16,768)
query : 1 - 832 (832/849)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 9, nucl 5, cyto_golg 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010467)
HIX0010467
HIT000642121 (
ENST00000543076
)
(Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein family protein.)
genome : 16,500,579 - 16,516,933 (16,355)
query : 1 - 406 (406/406)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, cyto 13, nucl 9, extr 5, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010467)
HIX0010467
HIT000633880 (
ENST00000534835
)
(Hypothetical short protein.)
genome : 16,500,579 - 16,502,040 (1,462)
query : 1 - 279 (279/279)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010467)
HIX0010467
HIT000479563 (
ENST00000396210
)
(Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein family protein.)
genome : 16,500,583 - 16,517,337 (16,755)
query : 1 - 914 (914/914)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 9.5, cyto 9, extr 8, mito 7, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010467)
HIX0010467
HIT000638081 (
ENST00000539036
)
(Membrane associated eicosanoid/glutathione metabolism-like domain containing protein.)
genome : 16,500,586 - 16,762,193 (261,608)
query : 1 - 566 (566/566)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 18, cyto 5, nucl 3, lyso 3, cyto_golg 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010467)
HIX0010467
HIT000428573
(
AK309707
)
(Conserved hypothetical protein.)
genome : 16,500,588 - 16,523,342 (22,755)
query : 1 - 933 (933/933)
4 exons
identity = 0.998
5'(1.000;1.000;1.000;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, cyto_nucl 8, E.R._mito 8, nucl 7, cyto 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010467)
HIX0010467
HIT000641301 (
ENST00000542256
)
(Conserved hypothetical protein.)
genome : 16,500,588 - 16,523,342 (22,755)
query : 1 - 933 (933/933)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, cyto_nucl 8, E.R._mito 8, nucl 7, cyto 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010467)
HIX0010467
HIT000423945
(
AK291148
)
(Microsomal glutathione S-transferase 1; Microsomal GST-1; EC=2.5.1.18; Microsomal GST-I;)
genome : 16,500,588 - 16,516,992 (16,405)
query : 1 - 564 (564/564)
4 exons
identity = 0.998
5'(1.000;1.000;0.989;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.18
KEGG pathway :
00480 : Glutathione metabolism (37)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
InterPro :
IPR001129 : Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein
IPR023352 : Membrane associated eicosanoid/glutathione metabolism-like domain
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 9.5, cyto 9, extr 8, mito 7, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010467)
HIX0010467
HIT000636923 (
ENST00000537878
)
(Membrane associated eicosanoid/glutathione metabolism-like domain containing protein.)
genome : 16,500,588 - 16,507,658 (7,071)
query : 1 - 551 (551/551)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, mito 7, cyto_nucl 7, nucl 5.5, cyto 5.5,
pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010467)
HIX0010467
HIT000638753 (
ENST00000539708
)
(Membrane associated eicosanoid/glutathione metabolism-like domain containing protein.)
genome : 16,500,598 - 16,516,994 (16,397)
query : 1 - 700 (700/700)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 12, cyto_nucl 8.5, mito 8, extr 7, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010467)
HIX0010467
HIT000032525
(
BC005923
)
Representative transcript
(Microsomal glutathione S-transferase 1; Microsomal GST-1; EC=2.5.1.18; Microsomal GST-I;)
genome : 16,500,611 - 16,517,342 (16,732)
query : 3 - 893 (891/923)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.996
EC number :
EC 2.5.1.18
KEGG pathway :
00480 : Glutathione metabolism (37)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
InterPro :
IPR001129 : Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein
IPR023352 : Membrane associated eicosanoid/glutathione metabolism-like domain
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 9.5, cyto 9, extr 8, mito 7, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010467)
HIX0010467
HIT000213311 (
NM_145791
)
(Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein family protein.)
genome : 16,500,712 - 16,517,344 (16,633)
query : 1 - 980 (980/997)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.18
KEGG pathway :
00480 : Glutathione metabolism (37)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 9.5, cyto 9, extr 8, mito 7, nucl 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010467)
HIX0010467
HIT000727105 (
NR_048547
)
(Membrane associated eicosanoid/glutathione metabolism-like domain containing protein.)
genome : 16,500,712 - 16,517,344 (16,633)
query : 1 - 885 (885/902)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 9, nucl 5, cyto_golg 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010467)
HIX0010467
HIT000479562 (
ENST00000396209
)
(Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein family protein.)
genome : 16,500,712 - 16,517,343 (16,632)
query : 1 - 979 (979/979)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 9.5, cyto 9, extr 8, mito 7, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010467)
HIX0010467
HIT000639101 (
ENST00000540056
)
(Membrane associated eicosanoid/glutathione metabolism-like domain containing protein.)
genome : 16,500,712 - 16,517,005 (16,294)
query : 1 - 546 (546/546)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 9, nucl 5, cyto_golg 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010467)
HIX0010467
HIT000639171 (
ENST00000540126
)
(Membrane associated eicosanoid/glutathione metabolism-like domain containing protein.)
genome : 16,500,731 - 16,510,633 (9,903)
query : 1 - 345 (345/365)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.945
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 10.5, mito 8, extr 6, nucl 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010467)
HIX0010467
HIT000637930 (
ENST00000538885
)
(Membrane associated eicosanoid/glutathione metabolism-like domain containing protein.)
genome : 16,503,680 - 16,507,312 (3,633)
query : 1 - 202 (202/202)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 10, extr 9, cyto_nucl 7.5, cyto 6.5, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010467)
HIX0010467
HIT000213310 (
NM_145764
)
(Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein family protein.)
genome : 16,506,351 - 16,517,344 (10,994)
query : 1 - 910 (910/927)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 2.5.1.18
KEGG pathway :
00480 : Glutathione metabolism (37)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 9.5, cyto 9, extr 8, mito 7, nucl 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010467)
HIX0010467
HIT000191196
(
J03746
)
(Microsomal glutathione S-transferase 1; Microsomal GST-1; EC=2.5.1.18; Microsomal GST-I;)
genome : 16,506,351 - 16,517,343 (10,993)
query : 1 - 909 (909/909)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.998)3'
coverage = 1.000
EC number :
EC 2.5.1.18
KEGG pathway :
00480 : Glutathione metabolism (37)
00980 : Metabolism of xenobiotics by cytochrome P450 (10)
00982 : Drug metabolism - cytochrome P450 (8)
InterPro :
IPR001129 : Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein
IPR023352 : Membrane associated eicosanoid/glutathione metabolism-like domain
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 9.5, cyto 9, extr 8, mito 7, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010467)
HIX0010467
HIT000479560 (
ENST00000396207
)
(Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein family protein.)
genome : 16,506,351 - 16,517,343 (10,993)
query : 1 - 909 (909/909)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 9.5, cyto 9, extr 8, mito 7, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010467)
HIX0010467
HIT000259588
(
BC056863
)
(Membrane associated eicosanoid/glutathione metabolism-like domain containing protein.)
genome : 16,507,165 - 16,530,123 (22,959)
query : 18 - 1,327 (1,310/1,457)
3 exons
identity = 0.999
5'(1.000;1.000;0.999)3'
coverage = 0.987
InterPro :
IPR023352 : Membrane associated eicosanoid/glutathione metabolism-like domain
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 8, cyto_nucl 8, extr 7, mito 7, cyto 6, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010467)
HIX0010467
HIT000634354 (
ENST00000535309
)
(Membrane associated eicosanoid/glutathione metabolism-like domain containing protein.)
genome : 16,507,165 - 16,530,126 (22,962)
query : 18 - 1,331 (1,314/1,331)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.987
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 8, cyto_nucl 8, extr 7, mito 7, cyto 6, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010467)
HIX0010467
HIT000637902 (
ENST00000538857
)
(Membrane associated eicosanoid/glutathione metabolism-like domain containing protein.)
genome : 16,507,165 - 16,742,514 (235,350)
query : 1 - 535 (535/535)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 16, mito 5, cyto 4, mito_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010467)
HIX0010467
HIT000099902
(
BT006982
)
(Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein family protein.)
genome : 16,507,187 - 16,516,974 (9,788)
query : 1 - 467 (467/468)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 0.998
InterPro :
IPR001129 : Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein
IPR023352 : Membrane associated eicosanoid/glutathione metabolism-like domain
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto_nucl 9.5, cyto 9, extr 8, mito 7, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010467)
HIX0010467
HIT000267126
(
CR407629
)
(Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein family protein.)
genome : 16,507,187 - 16,516,972 (9,786)
query : 1 - 465 (465/465)
3 exons
identity = 0.998
5'(1.000;0.989;1.000)3'
coverage = 1.000
InterPro :
IPR001129 : Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein
IPR023352 : Membrane associated eicosanoid/glutathione metabolism-like domain
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 9, cyto_nucl 9, mito 8, extr 7, nucl 5,
mito_pero 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010467)
HIX0010467
HIT000634669 (
ENST00000535624
)
(Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein family protein.)
genome : 16,510,445 - 16,517,194 (6,750)
query : 1 - 655 (655/655)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 25.5, cyto_nucl 16, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010467)
HIX0010467
HIT000043355
(
AK123482
)
(Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein family protein.)
genome : 16,515,502 - 16,517,343 (1,842)
query : 1 - 1,843 (1,843/1,843)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
InterPro :
IPR001129 : Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein
IPR023352 : Membrane associated eicosanoid/glutathione metabolism-like domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010467)
HIX0010467
HIT000479180 (
ENST00000395815
)
(Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein family protein.)
genome : 16,515,502 - 16,517,343 (1,842)
query : 1 - 1,842 (1,842/1,842)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010467)
HIX0010467
HIT000014636
(
AK058030
)
(Conserved hypothetical protein.)
genome : 16,535,761 - 16,591,695 (55,935)
query : 1 - 2,152 (2,152/2,152)
2 exons
identity = 0.997
5'(0.997;0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, nucl 15, cyto 11, extr 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010467)
HIX0010467
HIT000313208 (
ENST00000359720
)
(Conserved hypothetical protein.)
genome : 16,535,761 - 16,591,695 (55,935)
query : 1 - 2,152 (2,152/2,152)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 17, nucl 15, cyto 11, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010467)
HIX0192398
HIT000636220_01 (
ENST00000537175
)
(FACT complex subunit Spt16, N-terminal lobe domain containing protein.)
genome : 16,552,208 - 16,555,340 (3,133)
query : 1 - 3,133 (3,133/3,133)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, extr 3, mito 2, pero 2, mito_pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0192398)
HIX0192398
pHIT000021397 ( pHIT000021397 )
Representative transcript
(Conserved hypothetical protein.)
genome : 16,552,209 - 16,554,995 (2,787)
query : 1 - 1,059 (1,059/1,059)
3 exons
InterPro :
IPR000994 : Peptidase M24, structural domain
IPR029148 : FACT complex subunit Spt16, N-terminal lobe domain
IPR029149 : Creatinase/Aminopeptidase P/Spt16, N-terminal
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0192398)
CAGE tag :
H05BF48J1109
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : CR860057
Monodelphis
sp. (Opossum) : ENSMODT00000022919
Monodelphis
sp. (Opossum) : ENSMODT00000022921
Oryzias
sp. (Medaka) : ENSORLT00000011002
Tetraodon
sp. (Tetraodon) : GSTENT00005709001
Takifugu
sp. (Fugu) : SINFRUT00000166659
Macaca
sp. (Macaque) : XM_001096507
HIX0192398
HIT000669632_01 (
ENST00000556309
)
(FACT complex subunit Spt16, N-terminal lobe domain containing protein.)
genome : 16,554,720 - 16,555,373 (654)
query : 1 - 581 (581/582)
2 exons
identity = 0.950
3'(0.964;0.921)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto 10.5, cyto_nucl 10.5, nucl 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0192398)
HIX0130522
HIT000483968 (
ENST00000401104
)
(Non-protein coding transcript.)
genome : 16,562,189 - 16,562,265 (77)
query : 1 - 77 (77/77)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0130522)
HIX0171677
HIT000448639_03
(
DQ582108
)
Representative transcript
(Non-protein coding transcript.)
genome : 16,622,358 - 16,622,388 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171677)
HIX0210965
HIT000640037 (
ENST00000540992
)
(Aspartate/other aminotransferase family protein.)
genome : 16,666,379 - 16,667,305 (927)
query : 1 - 927 (927/927)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 15.5, nucl 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210965)
HIX0037262
HIT000192851
(
L31955
)
Representative transcript
(Non-protein coding transcript.)
genome : 16,701,079 - 16,701,278 (200)
query : 1 - 199 (199/199)
1 exon
identity = 0.990
5'(0.990)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0037262)
HIX0010468
HIT000315373 (
NM_001001395
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,701,306 - 16,761,148 (59,843)
query : 1 - 3,575 (3,575/3,592)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 18
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000722970 (
NM_001243609
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,701,306 - 16,761,148 (59,843)
query : 1 - 3,642 (3,642/3,659)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 18
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000726235 (
NR_045012
)
(LIM domain only protein 3 isoform 4.)
genome : 16,701,306 - 16,761,148 (59,843)
query : 1 - 3,767 (3,767/3,784)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 18
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000726236 (
NR_045013
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,701,306 - 16,761,148 (59,843)
query : 1 - 3,583 (3,583/3,600)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 18
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000726237 (
NR_045014
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,701,306 - 16,761,148 (59,843)
query : 1 - 3,516 (3,516/3,533)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 18
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000722974 (
NM_001243613
)
(LIM domain only protein 3 isoform 4.)
genome : 16,701,306 - 16,760,084 (58,779)
query : 1 - 3,579 (3,579/3,596)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000722971 (
NM_001243610
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,701,306 - 16,759,734 (58,429)
query : 1 - 3,414 (3,414/3,431)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 18
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000207343 (
NM_018640
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,701,306 - 16,759,536 (58,231)
query : 1 - 3,833 (3,833/3,850)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 18
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000722973 (
NM_001243612
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,701,306 - 16,758,904 (57,599)
query : 1 - 3,499 (3,499/3,516)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31, cyto_nucl 17
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000722972 (
NM_001243611
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,701,306 - 16,758,313 (57,008)
query : 1 - 3,811 (3,811/3,828)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 17.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000020450
(
AK095595
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,701,307 - 16,761,024 (59,718)
query : 1 - 3,448 (3,448/3,448)
4 exons
identity = 0.998
3'(0.999;1.000;0.995;0.987)5'
coverage = 1.000
InterPro :
IPR001781 : Zinc finger, LIM-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 18
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000308921 (
ENST00000354662
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,701,307 - 16,761,024 (59,718)
query : 1 - 3,450 (3,450/3,450)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 18
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000099118
(
BC050085
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,701,355 - 16,759,734 (58,380)
query : 2 - 3,366 (3,365/3,383)
5 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR001781 : Zinc finger, LIM-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 18
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB172825
Mus
sp. (Mouse) : AK034177
Danio
sp. (Zebrafish) : BC095186
Bos
sp. (Cow) : BC112712
Gallus
sp. (Chicken) : CR406209
Pongo
sp. (Orangutan) : CR858323
Equus
sp. (Horse) : ENSECAT00000022124
Oryzias
sp. (Medaka) : ENSORLT00000015954
Pan
sp. (Chimpanzee) : ENSPTRT00000042890
Rattus
sp. (Rat) : ENSRNOT00000010623
Tetraodon
sp. (Tetraodon) : GSTENT00013893001
Takifugu
sp. (Fugu) : SINFRUT00000137745
Monodelphis
sp. (Opossum) : XM_001366694
Canis
sp. (Dog) : XM_861485
HIX0010468
HIT000024030
(
AL050152
)
(Conserved hypothetical protein.)
genome : 16,701,354 - 16,704,174 (2,821)
query : 2 - 2,822 (2,821/2,838)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, mito 8, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000040189
(
BC026311
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,701,358 - 16,759,431 (58,074)
query : 1 - 3,676 (3,676/3,691)
4 exons
identity = 0.999
3'(0.999;1.000;1.000;0.998)5'
coverage = 1.000
InterPro :
IPR001781 : Zinc finger, LIM-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 18
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000024064
(
AL050188
)
(Conserved hypothetical protein.)
genome : 16,701,358 - 16,702,521 (1,164)
query : 2 - 1,165 (1,164/1,179)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, mito 8, golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000328393
(
AB044745
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,701,358 - 16,758,081 (56,724)
query : 1 - 3,527 (3,527/3,540)
4 exons
identity = 0.999
3'(0.999;1.000;0.995;1.000)5'
coverage = 1.000
InterPro :
IPR001781 : Zinc finger, LIM-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 17.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000539373 (
ENST00000441439
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,701,354 - 16,761,069 (59,716)
query : 1 - 3,515 (3,515/3,515)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 18
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000545543 (
ENST00000447609
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,701,355 - 16,759,734 (58,380)
query : 1 - 3,365 (3,365/3,365)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 18
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000479558 (
ENST00000396205
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,701,358 - 16,761,038 (59,681)
query : 1 - 3,534 (3,534/3,534)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 18
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000122305 (
ENST00000320122
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,701,358 - 16,758,313 (56,956)
query : 1 - 3,759 (3,759/3,759)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 17.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000107852 (
ENST00000261169
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,701,359 - 16,758,081 (56,723)
query : 1 - 3,526 (3,526/3,526)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 28.5, cyto_nucl 17.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000551661 (
ENST00000453727
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,702,309 - 16,759,374 (57,066)
query : 1 - 2,403 (2,403/2,403)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 18
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000075186
(
AF258348
)
(Zinc finger, LIM-type domain containing protein.)
genome : 16,702,914 - 16,760,936 (58,023)
query : 2 - 1,763 (1,762/1,763)
5 exons
identity = 0.999
3'(1.000;1.000;0.987;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR001781 : Zinc finger, LIM-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 27, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000089396
(
BC017777
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,703,143 - 16,760,961 (57,819)
query : 1 - 1,491 (1,491/1,522)
4 exons
identity = 0.999
3'(0.999;1.000;1.000;0.989)5'
coverage = 0.999
InterPro :
IPR001781 : Zinc finger, LIM-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 18
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000639893 (
ENST00000540848
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,703,133 - 16,763,460 (60,328)
query : 1 - 1,574 (1,574/1,574)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 18
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000640634 (
ENST00000541589
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,703,136 - 16,760,961 (57,826)
query : 1 - 1,499 (1,499/1,499)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 18
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000489098
(
AK294474
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,703,317 - 16,758,904 (55,588)
query : 1 - 1,488 (1,488/1,488)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001781 : Zinc finger, LIM-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000634580 (
ENST00000535535
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,703,317 - 16,758,904 (55,588)
query : 1 - 1,488 (1,488/1,488)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000636349 (
ENST00000537304
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,703,383 - 16,759,465 (56,083)
query : 1 - 1,685 (1,685/1,685)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 18
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000427460
(
AK308594
)
(LIM domain only protein 3 isoform 4.)
genome : 16,703,744 - 16,759,940 (56,197)
query : 1 - 1,489 (1,489/1,489)
7 exons
identity = 0.999
3'(1.000;0.992;0.995;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001781 : Zinc finger, LIM-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000640809 (
ENST00000541764
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,703,744 - 16,759,940 (56,197)
query : 1 - 1,489 (1,489/1,489)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000499634
(
AK316021
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,703,758 - 16,758,840 (55,083)
query : 1 - 983 (983/983)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001781 : Zinc finger, LIM-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000640340 (
ENST00000541295
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,703,758 - 16,758,840 (55,083)
query : 1 - 983 (983/983)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000633991 (
ENST00000534946
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,703,809 - 16,762,823 (59,015)
query : 1 - 1,016 (1,016/1,016)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 18
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000427762
(
AK308896
)
(LIM domain only protein 3 isoform 4.)
genome : 16,703,902 - 16,762,758 (58,857)
query : 1 - 983 (983/983)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001781 : Zinc finger, LIM-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 18
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000522126 (
ENST00000424192
)
(LIM domain only protein 3 isoform 4.)
genome : 16,703,902 - 16,762,758 (58,857)
query : 1 - 983 (983/983)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 18
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000489533
(
AK294909
)
Representative transcript
(LIM domain only protein 3 isoform 4.)
genome : 16,703,979 - 16,760,084 (56,106)
query : 1 - 906 (906/906)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001781 : Zinc finger, LIM-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000639490 (
ENST00000540445
)
(LIM domain only protein 3 isoform 4.)
genome : 16,703,979 - 16,760,084 (56,106)
query : 1 - 906 (906/906)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000328394
(
AB044746
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,704,033 - 16,760,981 (56,949)
query : 6 - 753 (748/753)
5 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;0.991)5'
coverage = 0.993
InterPro :
IPR001781 : Zinc finger, LIM-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 18
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000427692
(
AK308826
)
(LIM domain only protein 3 isoform 2.)
genome : 16,704,060 - 16,761,024 (56,965)
query : 1 - 889 (889/889)
6 exons
identity = 0.998
3'(1.000;1.000;0.992;1.000;1.000;0.994)5'
coverage = 1.000
InterPro :
IPR001781 : Zinc finger, LIM-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 18
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000640891 (
ENST00000541846
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,704,116 - 16,763,528 (59,413)
query : 1 - 573 (573/573)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 18
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000431284
(
AK312418
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,704,156 - 16,759,421 (55,266)
query : 1 - 867 (867/867)
4 exons
identity = 0.998
3'(0.991;1.000;1.000;0.998)5'
coverage = 1.000
InterPro :
IPR001781 : Zinc finger, LIM-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 18
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000635217 (
ENST00000536172
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,704,162 - 16,760,119 (55,958)
query : 1 - 587 (587/587)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 18
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000643799 (
ENST00000544754
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,704,166 - 16,760,934 (56,769)
query : 1 - 555 (555/555)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 18
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000636802 (
ENST00000537757
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,704,238 - 16,760,323 (56,086)
query : 1 - 516 (516/516)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 18
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000645326 (
ENST00000546281
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,704,238 - 16,760,289 (56,052)
query : 1 - 496 (496/496)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 18
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000638579 (
ENST00000539534
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,704,238 - 16,755,130 (50,893)
query : 1 - 543 (543/543)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 18
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000638277 (
ENST00000539232
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,713,347 - 16,758,847 (45,501)
query : 1 - 570 (570/580)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 0.983
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 18
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000645324 (
ENST00000546279
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,713,347 - 16,761,660 (48,314)
query : 1 - 590 (590/590)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 18
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000637096 (
ENST00000538051
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,713,387 - 16,761,148 (47,762)
query : 1 - 579 (579/579)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 18
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000635554 (
ENST00000536509
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,713,409 - 16,760,858 (47,450)
query : 1 - 550 (550/550)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 18
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000644481 (
ENST00000545436
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,713,415 - 16,757,783 (44,369)
query : 1 - 530 (530/530)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 18
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000639635 (
ENST00000540590
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,713,426 - 16,762,971 (49,546)
query : 1 - 565 (565/565)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 18
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000128068 (
ENST00000332914
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,713,440 - 16,763,028 (49,589)
query : 1 - 549 (549/549)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 18
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0210991
HIT000640937 (
ENST00000541892
)
(Hypothetical short protein.)
genome : 16,720,345 - 16,726,874 (6,530)
query : 1 - 603 (603/603)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 14, cyto 8.5, cyto_nucl 8.5, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210991)
HIX0010468
HIT000636613 (
ENST00000537568
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,747,186 - 16,763,023 (15,838)
query : 1 - 594 (594/594)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000642766 (
ENST00000543721
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,750,550 - 16,760,056 (9,507)
query : 1 - 3,626 (3,626/3,626)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30, cyto_nucl 18
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000643321 (
ENST00000544276
)
(LIM domain only protein 3 isoform 4.)
genome : 16,751,809 - 16,761,022 (9,214)
query : 1 - 460 (460/460)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 31, cyto_nucl 17
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000489275
(
AK294651
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,752,951 - 16,757,990 (5,040)
query : 1 - 1,044 (1,044/1,044)
2 exons
identity = 0.998
3'(0.998;1.000)5'
coverage = 1.000
InterPro :
IPR001781 : Zinc finger, LIM-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 17.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000537534 (
ENST00000439600
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,752,951 - 16,757,990 (5,040)
query : 1 - 1,044 (1,044/1,044)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 30.5, cyto_nucl 17.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0010468
HIT000637065 (
ENST00000538020
)
(LIM domain only protein 3; LMO-3; Neuronal-specific transcription factor DAT1; Rhombotin-3;)
genome : 16,753,620 - 16,755,227 (1,608)
query : 1 - 622 (622/622)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 29, cyto_nucl 18
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0010468)
HIX0026479
HIT000048879
(
AK129608
)
Representative transcript
(Conserved hypothetical protein.)
genome : 16,846,734 - 16,848,911 (2,178)
query : 1 - 2,073 (2,073/2,073)
2 exons
identity = 0.996
5'(0.998;0.987)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto_mito 13.8333, cyto 10.5,
cyto_nucl 6.16667, extr 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026479)
HIX0026479
HIT000516508 (
ENST00000418574
)
(Conserved hypothetical protein.)
genome : 16,846,734 - 16,848,911 (2,178)
query : 1 - 2,178 (2,178/2,178)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, mito 11, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0026479)
HIX0210936
HIT000638311 (
ENST00000539266
)
(Non-protein coding transcript.)
genome : 16,939,696 - 16,940,779 (1,084)
query : 1 - 260 (260/260)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210936)
HIX0129723
HIT000659676 (
NR_036619
)
(S-phase kinase-associated protein 1 isoform a.)
genome : 17,141,681 - 17,143,562 (1,882)
query : 1 - 1,882 (1,882/1,882)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
EC number :
EC 3.1.1.3
KEGG pathway :
00561 : Glycerolipid metabolism (35)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, cyto_mito 14, extr 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0129723)
HIX0129723
HIT000429310
(
AK310444
)
Representative transcript
(S-phase kinase-associated protein 1 isoform a.)
genome : 17,141,681 - 17,142,951 (1,271)
query : 1 - 1,270 (1,270/1,270)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
EC number :
EC 3.1.1.3
KEGG pathway :
00561 : Glycerolipid metabolism (35)
01100 : Metabolic pathways (1346)
InterPro :
IPR001232 : S-phase kinase-associated protein 1-like
IPR011333 : BTB/POZ fold
IPR016072 : SKP1 component, dimerisation
IPR016073 : SKP1 component, POZ domain
GO :
0006511 : Biological Process : ubiquitin-dependent protein catabolic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, cyto_mito 13, extr 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0129723)
Ortholog candidate ( ->
Evola
)
Takifugu
sp. (Fugu) : SINFRUT00000156654
Macaca
sp. (Macaque) : XR_011169
HIX0129723
HIT000542447 (
ENST00000444513
)
(S-phase kinase-associated protein 1 isoform a.)
genome : 17,142,060 - 17,142,870 (811)
query : 1 - 499 (499/499)
2 exons
identity = 0.996
5'(1.000;0.968)3'
coverage = 1.000
EC number :
EC 3.1.1.3
KEGG pathway :
00561 : Glycerolipid metabolism (35)
01100 : Metabolic pathways (1346)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, nucl 8
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0129723)
HIX0171682
HIT000124183 (
ENST00000325349
)
(Translation elongation factor EFTu/EF1A, domain 2 containing protein.)
genome : 17,143,604 - 17,145,017 (1,414)
query : 1 - 1,414 (1,414/1,414)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 16, nucl 8, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171682)
HIX0171682
HIT000452629_16
(
DQ586098
)
Representative transcript
(Non-protein coding transcript.)
genome : 17,143,954 - 17,143,984 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171682)
HIX0210737
HIT000585668 (
ENST00000481703
)
(Ribosomal protein L30, ferredoxin-like fold domain containing protein.)
genome : 17,274,650 - 17,275,394 (745)
query : 1 - 745 (745/745)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19.5, cyto 12, E.R._mito 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210737)
HIX0210877
HIT000635865 (
ENST00000536820
)
(Conserved hypothetical protein.)
genome : 17,536,286 - 17,537,581 (1,296)
query : 1 - 1,296 (1,296/1,296)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, cyto_nucl 8, cysk 8, extr 5, mito 2,
lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210877)
HIX0211089
HIT000644758 (
ENST00000545713
)
(Mitochondrial inner membrane translocase subunit Tim17/Tim22/Tim23/peroxisomal protein PMP24 family protein.)
genome : 17,553,333 - 17,553,848 (516)
query : 1 - 516 (516/516)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 16, mito 9, lyso 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0211089)
HIX0210957
HIT000639444 (
ENST00000540399
)
(Hypothetical short protein.)
genome : 17,662,287 - 17,742,926 (80,640)
query : 1 - 1,003 (1,003/1,003)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 11, nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210957)
HIX0210933
HIT000638150 (
ENST00000539105
)
(Hypothetical short protein.)
genome : 17,742,191 - 17,768,397 (26,207)
query : 1 - 460 (460/460)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0210933)
HIX0220650
HIT000725833 (
NR_039770
)
(Non-protein coding transcript.)
genome : 17,826,233 - 17,826,328 (96)
query : 1 - 96 (96/96)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0220650)
HIX0192398
pHIT000021397 ( pHIT000021397 )
Representative transcript
(Conserved hypothetical protein.)
genome : 16,552,209 - 16,554,995 (2,787)
query : 1 - 1,059 (1,059/1,059)
3 exons
InterPro :
IPR000994 : Peptidase M24, structural domain
IPR029148 : FACT complex subunit Spt16, N-terminal lobe domain
IPR029149 : Creatinase/Aminopeptidase P/Spt16, N-terminal
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0192398)
CAGE tag :
H04BA35H0604,H05BB41F2002,H05BC25N0407
H05BC38B0305,H05BF48J1109
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : CR860057
Monodelphis
sp. (Opossum) : ENSMODT00000022919
Monodelphis
sp. (Opossum) : ENSMODT00000022921
Oryzias
sp. (Medaka) : ENSORLT00000011002
Tetraodon
sp. (Tetraodon) : GSTENT00005709001
Takifugu
sp. (Fugu) : SINFRUT00000166659
Macaca
sp. (Macaque) : XM_001096507
AC007528.5
16500001-16634839 F +
NCBI
AC007552.4
16634840-16748589 F +
NCBI
AC007529.5
16748590-16895630 F -
NCBI
AC024095.13
16895631-17017370 F +
NCBI
AC023512.28
17017371-17173452 F -
NCBI
AC129027.2
17173453-17204561 F -
NCBI
AC092793.5
17204562-17278557 F +
NCBI
AC092110.9
17278558-17458027 F +
NCBI
AC092866.6
17458028-17509978 F +
NCBI
AC090672.6
17509979-17534568 F -
NCBI
AC048352.18
17534569-17749334 F +
NCBI
AC087321.20
17749335-17870342 F -
NCBI
AC093950.6
17870343-17889132 F +
NCBI
AC087774.27
17889133-18071123 F +
NCBI
AC087259.18
18071124-18100000 F +
NCBI