bases per tick :
500
200
100
50
20
10
5
2
kb first site :
main :
All Human Genes
JIGSAW prediction
ESTs assembly
homology :
UCSC
CCDS
Pseudogene.org
Conserved regions (
Segmental duplication
P.troglodytes
P.abelii
M.mulatta
M.musculus
R.norvegicus
C.familiaris
E.caballus
B.taurus
M.domestica
G.gallus
D.rerio
O.latipes
T.nigroviridis
T.rubripes
)
gene prediction :
FGENESH
GenScan
HMMgene
tRNA
show... :
SNPs
ESTs(summary)
ESTs(detail)
CAGE tag(summary)
CAGE tag(detail)
sequence viewer :
( start, end )
( middle, total length )
= (
,
)
HIX0008968
HIT000000940
(
AB033050
)
(Zinc finger MIZ domain-containing protein 1; PIAS-like protein Zimp10; Retinoic acid-induced protein 17;)
genome : 81,003,425 - 81,074,359 (70,935)
query : 1 - 4,860 (4,860/4,860)
19 exons
identity = 0.994
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;0.986)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 9, plas 8.5, extr_plas 7.5, extr 5.5, nucl 5,
mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008968)
HIX0008968
HIT000576434 (
ENST00000472035
)
(Conserved hypothetical protein.)
genome : 81,003,426 - 81,050,842 (47,417)
query : 1 - 457 (457/457)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto_nucl 7, mito 6, nucl 4.5, cyto 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008968)
HIX0008968
HIT000007764
(
AK024490
)
(Zinc finger MIZ domain-containing protein 2 isoform 2.)
genome : 81,036,936 - 81,056,692 (19,757)
query : 9 - 4,259 (4,251/4,259)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.999)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, nucl 6.5, cyto_nucl 6, cyto 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008968)
HIX0008968
HIT000582466 (
ENST00000478357
)
(Conserved hypothetical protein.)
genome : 81,036,936 - 81,056,692 (19,757)
query : 1 - 4,252 (4,252/4,252)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 15.5, cyto 12.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008968)
HIX0008968
HIT000563998
(
AF357909
)
Representative transcript
(Zinc finger MIZ domain-containing protein 1; PIAS-like protein Zimp10; Retinoic acid-induced protein 17;)
genome : 81,045,210 - 81,072,506 (27,297)
query : 1 - 2,907 (2,907/2,907)
20 exons
identity = 0.988
5'(0.994;0.974;0.982;0.986;1.000;0.988;0.985;
1.000;1.000;0.994;0.978;0.986;1.000;0.981;
1.000;0.929;0.980;0.982;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR004181 : Zinc finger, MIZ-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10.5, cyto_nucl 8.5, extr_plas 6, plas 5.5,
extr 5.5, nucl 5.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008968)
HIX0008968
HIT000544311 (
ENST00000446377
)
(Conserved hypothetical protein.)
genome : 81,065,975 - 81,072,506 (6,532)
query : 1 - 402 (402/402)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15, cyto 7, mito 7, cyto_mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008968)
HIX0008968
HIT000091048
(
BC025342
)
(Conserved hypothetical protein.)
genome : 81,070,711 - 81,073,434 (2,724)
query : 1 - 1,267 (1,267/1,333)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.963
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 12, mito 5, extr 4, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008968)
HIX0008968
HIT000334147
(
BC068072
)
(Conserved hypothetical protein.)
genome : 81,070,711 - 81,073,434 (2,724)
query : 1 - 1,267 (1,267/1,333)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.963
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18, cyto_nucl 12, mito 5, extr 4, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008968)
HIX0008968
HIT000099093
(
BC049845
)
(Conserved hypothetical protein.)
genome : 81,070,897 - 81,074,423 (3,527)
query : 1 - 2,060 (2,060/2,110)
2 exons
identity = 0.993
5'(1.000;0.993)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008968)
HIX0008968
HIT000051543
(
BC035890
)
(Conserved hypothetical protein.)
genome : 81,070,897 - 81,074,423 (3,527)
query : 1 - 2,060 (2,060/2,100)
2 exons
identity = 0.993
5'(1.000;0.993)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008968)
HIX0008968
HIT000023805
(
AL049432
)
(Conserved hypothetical protein.)
genome : 81,073,764 - 81,076,276 (2,513)
query : 1 - 2,513 (2,513/2,536)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.991
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto_nucl 7.16667, nucl 5.5, cyto 5.5,
cyto_pero 4.5, mito_nucl 4.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008968)
HIX0008968
HIT000006877
(
AK023603
)
(Conserved hypothetical protein.)
genome : 81,073,917 - 81,076,273 (2,357)
query : 1 - 2,355 (2,355/2,355)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 11.5, cyto_nucl 10.5, extr 10, cyto_pero 8.16667,
nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008968)
HIX0008968
HIT000065789
(
AF070622
)
(Hypothetical protein.)
genome : 81,075,044 - 81,076,136 (1,093)
query : 1 - 1,093 (1,093/1,115)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008968)
HIX0219033
HIT000595644 (
ENST00000492149
)
(Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain containing protein.)
genome : 81,107,256 - 81,109,791 (2,536)
query : 1 - 646 (646/646)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 21, extr 10
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219033)
HIX0218983
HIT000252898
(
AY358854
)
Representative transcript
(Conserved hypothetical protein.)
genome : 81,112,780 - 81,114,472 (1,693)
query : 24 - 1,718 (1,695/1,758)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 0.987
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 5, cyto_nucl 3.83333, cyto_pero 3.33333,
mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218983)
HIX0008970
HIT000092667
(
BC032450
)
(Conserved hypothetical protein.)
genome : 81,142,084 - 81,144,328 (2,245)
query : 1 - 2,245 (2,245/2,350)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, mito 6, nucl 3, cyto 3, cyto_nucl 3,
E.R._mito 3, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008970)
HIX0008970
HIT000023855
(
AL049949
)
(Hypothetical short protein.)
genome : 81,142,086 - 81,144,825 (2,740)
query : 1 - 2,738 (2,738/2,758)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, mito 6, nucl 3, cyto 3, cyto_nucl 3,
E.R._mito 3, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008970)
HIX0008970
HIT000040592
(
BC028617
)
(Zinc finger CCHC domain-containing protein 24;)
genome : 81,142,084 - 81,205,383 (63,300)
query : 3 - 4,932 (4,930/4,947)
4 exons
identity = 0.998
3'(0.999;1.000;1.000;0.993)5'
coverage = 1.000
InterPro :
IPR001878 : Zinc finger, CCHC-type
IPR025829 : Zinc knuckle CX2CX3GHX4C
IPR027377 : Zinc-binding domain
GO :
0003676 : Molecular Function : nucleic acid binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, extr 11, cyto_nucl 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008970)
HIX0008970
HIT000214324 (
NM_153367
)
(Zinc finger CCHC domain-containing protein 24;)
genome : 81,142,081 - 81,205,383 (63,303)
query : 1 - 4,933 (4,933/4,933)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, extr 11, cyto_nucl 11
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008970)
HIX0008970
HIT000353616 (
ENST00000372336
)
(Zinc finger CCHC domain-containing protein 24;)
genome : 81,142,081 - 81,205,383 (63,303)
query : 1 - 4,933 (4,933/4,933)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, extr 11, cyto_nucl 11
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008970)
HIX0170970
HIT000536488 (
ENST00000438554
)
(Hypothetical protein.)
genome : 81,142,084 - 81,169,030 (26,947)
query : 1 - 506 (506/506)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13.5, cyto_mito 10, extr 9, cyto_nucl 5.83333,
cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170970)
HIX0008970
HIT000095564
(
BC039249
)
(Zinc finger CCHC domain-containing protein 24.)
genome : 81,143,041 - 81,205,376 (62,336)
query : 4 - 3,969 (3,966/3,981)
4 exons
identity = 0.996
3'(0.996;0.994;1.000;0.991)5'
coverage = 0.999
InterPro :
IPR001878 : Zinc finger, CCHC-type
IPR025829 : Zinc knuckle CX2CX3GHX4C
IPR027377 : Zinc-binding domain
GO :
0003676 : Molecular Function : nucleic acid binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, extr 11, cyto_nucl 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008970)
HIX0008970
HIT000008058
(
AK024784
)
(Conserved hypothetical protein.)
genome : 81,143,400 - 81,145,756 (2,357)
query : 1 - 2,356 (2,356/2,379)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, mito 6, nucl 3, cyto 3, cyto_nucl 3,
E.R._mito 3, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008970)
HIX0008970
HIT000053921
(
BC053564
)
Representative transcript
(Zinc finger CCHC domain-containing protein 24;)
genome : 81,143,400 - 81,205,282 (61,883)
query : 1 - 3,515 (3,515/3,537)
4 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001878 : Zinc finger, CCHC-type
IPR025829 : Zinc knuckle CX2CX3GHX4C
IPR027377 : Zinc-binding domain
GO :
0003676 : Molecular Function : nucleic acid binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, extr 11, cyto_nucl 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008970)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB097510
Danio
sp. (Zebrafish) : BC141714
Bos
sp. (Cow) : ENSBTAT00000005060
Canis
sp. (Dog) : ENSCAFT00000024863
Oryzias
sp. (Medaka) : ENSORLT00000008385
Oryzias
sp. (Medaka) : ENSORLT00000011135
Pongo
sp. (Orangutan) : ENSPPYT00000002764
Rattus
sp. (Rat) : ENSRNOT00000061883
Takifugu
sp. (Fugu) : SINFRUT00000152537
Takifugu
sp. (Fugu) : SINFRUT00000154999
Monodelphis
sp. (Opossum) : XM_001364865
Equus
sp. (Horse) : XM_001503137
Gallus
sp. (Chicken) : XM_421599
Pan
sp. (Chimpanzee) : XM_507867
HIX0008970
HIT000057254
(
BX648607
)
(Conserved hypothetical protein.)
genome : 81,143,400 - 81,145,899 (2,500)
query : 1 - 2,500 (2,500/2,520)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, mito 6, nucl 3, cyto 3, cyto_nucl 3,
E.R._mito 3, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008970)
HIX0008970
HIT000089125
(
BC016959
)
(Hypothetical short protein.)
genome : 81,143,400 - 81,145,134 (1,735)
query : 1 - 1,735 (1,735/1,753)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, mito 6, nucl 3, cyto 3, cyto_nucl 3,
E.R._mito 3, mito_pero 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008970)
HIX0008970
HIT000082314
(
AK075279
)
(Zinc finger CCHC domain-containing protein 24;)
genome : 81,144,586 - 81,205,235 (60,650)
query : 1 - 2,280 (2,280/2,280)
4 exons
identity = 0.997
3'(0.996;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001878 : Zinc finger, CCHC-type
IPR025829 : Zinc knuckle CX2CX3GHX4C
IPR027377 : Zinc-binding domain
GO :
0003676 : Molecular Function : nucleic acid binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, extr 11, cyto_nucl 11
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008970)
HIX0008970
HIT000487985
(
AK293361
)
(Zinc finger CCHC domain-containing protein 24.)
genome : 81,145,299 - 81,203,928 (58,630)
query : 2 - 1,354 (1,353/1,354)
4 exons
identity = 0.998
3'(0.997;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR001878 : Zinc finger, CCHC-type
IPR025829 : Zinc knuckle CX2CX3GHX4C
IPR027377 : Zinc-binding domain
GO :
0003676 : Molecular Function : nucleic acid binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, extr 9, cyto 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008970)
HIX0008970
HIT000498358
(
AK303734
)
(Zinc finger CCHC domain-containing protein 24.)
genome : 81,145,702 - 81,203,979 (58,278)
query : 1 - 943 (943/943)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001878 : Zinc finger, CCHC-type
IPR025829 : Zinc knuckle CX2CX3GHX4C
IPR027377 : Zinc-binding domain
GO :
0003676 : Molecular Function : nucleic acid binding
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 9, nucl 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008970)
HIX0008970
HIT000427742
(
AK308876
)
(Zinc finger CCHC domain-containing protein 24.)
genome : 81,145,769 - 81,205,172 (59,404)
query : 1 - 1,176 (1,176/1,176)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR027377 : Zinc-binding domain
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20.5, cyto_nucl 13, extr 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008970)
HIX0008970
HIT000353613 (
ENST00000372333
)
(Conserved hypothetical protein.)
genome : 81,145,793 - 81,203,975 (58,183)
query : 1 - 906 (906/906)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13, extr 12, cyto_nucl 10, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008970)
HIX0035565
HIT000091704
(
BC029259
)
Representative transcript
(Hypothetical protein.)
genome : 81,164,063 - 81,165,853 (1,791)
query : 1 - 1,790 (1,790/1,824)
1 exon
identity = 0.994
3'(0.994)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 5, cyto 5, cyto_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035565)
HIX0219040
HIT000670916 (
ENST00000557620
)
(Conserved hypothetical protein.)
genome : 81,259,406 - 81,259,772 (367)
query : 1 - 367 (367/367)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 18.5, cyto_nucl 16, cyto 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219040)
HIX0008971
HIT000024991
(
AL133089
)
Representative transcript
(Conserved hypothetical protein.)
genome : 81,261,023 - 81,262,264 (1,242)
query : 4 - 1,245 (1,242/1,276)
1 exon
identity = 0.994
3'(0.994)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008971)
HIX0190543
HIT000554480 (
ENST00000456546
)
(Non-protein coding transcript.)
genome : 81,263,829 - 81,266,037 (2,209)
query : 1 - 333 (333/333)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0190543)
HIX0170545
HIT000467941_04
(
DQ601410
)
Representative transcript
(Non-protein coding transcript.)
genome : 81,264,814 - 81,264,843 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170545)
HIX0190543
HIT000544769 (
ENST00000446835
)
(Conserved hypothetical protein.)
genome : 81,265,833 - 81,266,643 (811)
query : 1 - 811 (811/811)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15, cyto 13.5, nucl 11.5, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0190543)
HIX0190543
HIT000497075
(
AK302451
)
Representative transcript
(Basic proline-rich protein; Contains: Proline-rich peptide SP-B-like; PRP-SP-B-like; Contains: Proline-rich peptide SP-A; PRP-SP-A; Contains: Proline-rich peptide SP-B; PRP-SP-B; Contains: Parotid hormone; PH-Ab; Precursor;)
genome : 81,266,126 - 81,270,678 (4,553)
query : 1 - 1,594 (1,594/1,594)
3 exons
identity = 0.999
3'(0.999;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 8, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0190543)
Ortholog candidate ( ->
Evola
)
Pongo
sp. (Orangutan) : ENSPPYT00000002763
HIX0190543
HIT000637367 (
ENST00000538322
)
(Basic proline-rich protein; Contains: Proline-rich peptide SP-B-like; PRP-SP-B-like; Contains: Proline-rich peptide SP-A; PRP-SP-A; Contains: Proline-rich peptide SP-B; PRP-SP-B; Contains: Parotid hormone; PH-Ab; Precursor;)
genome : 81,266,126 - 81,270,678 (4,553)
query : 1 - 1,594 (1,594/1,594)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 20, cyto 8, mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0190543)
HIX0201557
HIT000445805_04
(
DQ579274
)
Representative transcript
(Non-protein coding transcript.)
genome : 81,270,847 - 81,270,876 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201557)
HIX0170530
HIT000461604_07
(
DQ595073
)
Representative transcript
(Non-protein coding transcript.)
genome : 81,272,078 - 81,272,107 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170530)
HIX0035654
HIT000264006
(
BC070048
)
Representative transcript
(Eukaryotic translation initiation factor 5A-1; eIF-5A-1; eIF-5A1; Eukaryotic initiation factor 5A isoform 1; eIF-5A; Rev-binding factor; eIF-4D;)
genome : 81,272,357 - 81,276,191 (3,835)
query : 1 - 3,836 (3,836/3,874)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
InterPro :
IPR001884 : Translation elongation factor IF5A
IPR008991 : Translation protein SH3-like domain
IPR012340 : Nucleic acid-binding, OB-fold
IPR014722 : Ribosomal protein L2 domain 2
IPR019769 : Translation elongation factor, IF5A, hypusine site
IPR020189 : Translation elongation factor, IF5A C-terminal
GO :
0003723 : Molecular Function : RNA binding
0003746 : Molecular Function : translation elongation factor activity
0006452 : Biological Process : translational frameshifting
0008612 : Biological Process : peptidyl-lysine modification to peptidyl-hypusine
0043022 : Molecular Function : ribosome binding
0045901 : Biological Process : positive regulation of translational elongation
0045905 : Biological Process : positive regulation of translational termination
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 12, cysk 7, nucl 3.5,
cysk_plas 3.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035654)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : BC152189
Monodelphis
sp. (Opossum) : ENSMODT00000022863
Gallus
sp. (Chicken) : M99499
Mus
sp. (Mouse) : XM_001472647
Pan
sp. (Chimpanzee) : XM_507873
HIX0035654
HIT000485423 (
NM_001099692
)
(Eukaryotic translation initiation factor 5A-1; eIF-5A-1; eIF-5A1; Eukaryotic initiation factor 5A isoform 1; eIF-5A; Rev-binding factor; eIF-4D;)
genome : 81,272,357 - 81,276,191 (3,835)
query : 1 - 3,835 (3,835/3,849)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 12, cysk 7, nucl 3.5,
cysk_plas 3.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035654)
HIX0035654
HIT000619882 (
ENST00000520547
)
(Eukaryotic translation initiation factor 5A-1; eIF-5A-1; eIF-5A1; Eukaryotic initiation factor 5A isoform 1; eIF-5A; Rev-binding factor; eIF-4D;)
genome : 81,272,357 - 81,276,188 (3,832)
query : 1 - 3,832 (3,832/3,832)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 12, cysk 7, nucl 3.5,
cysk_plas 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035654)
HIX0170507
HIT000451124_04
(
DQ584593
)
Representative transcript
(Non-protein coding transcript.)
genome : 81,272,382 - 81,272,411 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170507)
HIX0170486
HIT000436479_04
(
DQ569948
)
Representative transcript
(Non-protein coding transcript.)
genome : 81,272,567 - 81,272,597 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170486)
HIX0170534
HIT000463130_05
(
DQ596599
)
Representative transcript
(Non-protein coding transcript.)
genome : 81,272,682 - 81,272,711 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170534)
HIX0035654
HIT000460419_03
(
DQ593888
)
(Non-protein coding transcript.)
genome : 81,272,789 - 81,272,818 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035654)
HIX0035654
HIT000453517_03
(
DQ586986
)
(Non-protein coding transcript.)
genome : 81,272,792 - 81,272,821 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035654)
HIX0171027
HIT000540315 (
ENST00000442381
)
(Ribosomal protein S12e family protein.)
genome : 81,303,843 - 81,304,112 (270)
query : 1 - 270 (270/270)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171027)
HIX0170313
HIT000485274_03 (
NM_001098668
)
(Pulmonary surfactant-associated protein A2; PSP-A; PSPA; SP-A; SP-A2; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-5; Precursor;)
genome : 81,315,608 - 81,320,163 (4,556)
query : 1 - 2,201 (2,201/2,201)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170313)
HIX0170313
HIT000353605 (
ENST00000372325
)
(Pulmonary surfactant-associated protein A2; PSP-A; PSPA; SP-A; SP-A2; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-5; Precursor;)
genome : 81,315,608 - 81,320,151 (4,544)
query : 1 - 2,189 (2,189/2,189)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170313)
HIX0170313
HIT000652883
(
HQ021421
)
(Pulmonary surfactant-associated protein A2; PSP-A; PSPA; SP-A; SP-A2; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-5; Precursor;)
genome : 81,315,657 - 81,320,163 (4,507)
query : 1 - 2,155 (2,155/2,155)
6 exons
identity = 0.997
3'(0.998;1.000;1.000;0.995;0.909;1.000)5'
coverage = 1.000
InterPro :
IPR001304 : C-type lectin
IPR008160 : Collagen triple helix repeat
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, mito 3, cyto 2, lyso 2, E.R._mito 2,
mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170313)
HIX0170313
HIT000652884
(
HQ021422
)
(Pulmonary surfactant-associated protein A2; PSP-A; PSPA; SP-A; SP-A2; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-5; Precursor;)
genome : 81,315,657 - 81,320,163 (4,507)
query : 1 - 2,155 (2,155/2,155)
6 exons
identity = 0.994
3'(0.995;1.000;1.000;1.000;0.909;1.000)5'
coverage = 1.000
InterPro :
IPR001304 : C-type lectin
IPR008160 : Collagen triple helix repeat
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170313)
HIX0170313
HIT000652885
(
HQ021423
)
(Pulmonary surfactant-associated protein A2; PSP-A; PSPA; SP-A; SP-A2; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-5; Precursor;)
genome : 81,315,657 - 81,320,163 (4,507)
query : 1 - 2,155 (2,155/2,155)
6 exons
identity = 0.997
3'(0.998;1.000;1.000;1.000;0.909;1.000)5'
coverage = 1.000
InterPro :
IPR001304 : C-type lectin
IPR008160 : Collagen triple helix repeat
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170313)
HIX0170313
HIT000652886
(
HQ021424
)
(Pulmonary surfactant-associated protein A2; PSP-A; PSPA; SP-A; SP-A2; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-5; Precursor;)
genome : 81,315,657 - 81,320,163 (4,507)
query : 1 - 2,155 (2,155/2,155)
6 exons
identity = 0.992
3'(0.992;1.000;1.000;0.995;0.909;1.000)5'
coverage = 1.000
InterPro :
IPR001304 : C-type lectin
IPR008160 : Collagen triple helix repeat
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, mito 3, cyto 2, lyso 2, E.R._mito 2,
mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170313)
HIX0170313
HIT000652887
(
HQ021425
)
(Pulmonary surfactant-associated protein A2; PSP-A; PSPA; SP-A; SP-A2; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-5; Precursor;)
genome : 81,315,657 - 81,320,163 (4,507)
query : 1 - 2,155 (2,155/2,155)
6 exons
identity = 0.995
3'(0.996;1.000;0.992;1.000;0.909;1.000)5'
coverage = 1.000
InterPro :
IPR001304 : C-type lectin
IPR008160 : Collagen triple helix repeat
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170313)
HIX0170313
HIT000652888
(
HQ021426
)
(Pulmonary surfactant-associated protein A2; PSP-A; PSPA; SP-A; SP-A2; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-5; Precursor;)
genome : 81,315,657 - 81,320,163 (4,507)
query : 1 - 2,152 (2,152/2,152)
6 exons
identity = 0.996
3'(0.996;1.000;0.992;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001304 : C-type lectin
IPR008160 : Collagen triple helix repeat
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170313)
HIX0170313
HIT000652889
(
HQ021427
)
(Pulmonary surfactant-associated protein A2; PSP-A; PSPA; SP-A; SP-A2; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-5; Precursor;)
genome : 81,315,657 - 81,320,163 (4,507)
query : 1 - 2,152 (2,152/2,152)
6 exons
identity = 0.998
3'(0.998;1.000;1.000;0.995;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001304 : C-type lectin
IPR008160 : Collagen triple helix repeat
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, mito 3, cyto 2, lyso 2, E.R._mito 2,
mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170313)
Ortholog candidate ( ->
Evola
)
Equus
sp. (Horse) : AB015963
Mus
sp. (Mouse) : AK075702
Bos
sp. (Cow) : BC123546
Gallus
sp. (Chicken) : DQ129667
Monodelphis
sp. (Opossum) : ENSMODT00000001876
Pongo
sp. (Orangutan) : ENSPPYT00000002762
Canis
sp. (Dog) : M11769
Macaca
sp. (Macaque) : XM_001089552
Danio
sp. (Zebrafish) : XM_001341879
Pan
sp. (Chimpanzee) : XM_521525
HIX0170313
HIT000652890
(
HQ021428
)
(Pulmonary surfactant-associated protein A2; PSP-A; PSPA; SP-A; SP-A2; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-5; Precursor;)
genome : 81,315,657 - 81,320,163 (4,507)
query : 1 - 2,152 (2,152/2,152)
6 exons
identity = 0.996
3'(0.995;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001304 : C-type lectin
IPR008160 : Collagen triple helix repeat
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170313)
HIX0170313
HIT000652891
(
HQ021429
)
(Pulmonary surfactant-associated protein A2; PSP-A; PSPA; SP-A; SP-A2; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-5; Precursor;)
genome : 81,315,657 - 81,320,163 (4,507)
query : 1 - 2,152 (2,152/2,152)
6 exons
identity = 0.999
3'(0.998;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001304 : C-type lectin
IPR008160 : Collagen triple helix repeat
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170313)
HIX0170313
HIT000652892
(
HQ021430
)
(Pulmonary surfactant-associated protein A2; PSP-A; PSPA; SP-A; SP-A2; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-5; Precursor;)
genome : 81,315,657 - 81,320,163 (4,507)
query : 1 - 2,152 (2,152/2,152)
6 exons
identity = 0.993
3'(0.992;1.000;1.000;0.995;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001304 : C-type lectin
IPR008160 : Collagen triple helix repeat
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, mito 3, cyto 2, lyso 2, E.R._mito 2,
mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170313)
HIX0170313
HIT000652893
(
HQ021431
)
(Pulmonary surfactant-associated protein A2; PSP-A; PSPA; SP-A; SP-A2; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-5; Precursor;)
genome : 81,315,657 - 81,320,163 (4,507)
query : 1 - 2,152 (2,152/2,152)
6 exons
identity = 0.997
3'(0.996;1.000;0.992;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001304 : C-type lectin
IPR008160 : Collagen triple helix repeat
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170313)
HIX0170313
HIT000652894
(
HQ021432
)
(Pulmonary surfactant-associated protein A2; PSP-A; PSPA; SP-A; SP-A2; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-5; Precursor;)
genome : 81,315,657 - 81,320,163 (4,507)
query : 1 - 2,155 (2,155/2,155)
6 exons
identity = 0.995
3'(0.996;1.000;0.992;1.000;0.909;1.000)5'
coverage = 1.000
InterPro :
IPR001304 : C-type lectin
IPR008160 : Collagen triple helix repeat
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170313)
HIX0170313
HIT000391161_03
(
BC139727
)
(Pulmonary surfactant-associated protein A2; PSP-A; PSPA; SP-A; SP-A2; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-5; Precursor;)
genome : 81,316,185 - 81,319,262 (3,078)
query : 1 - 1,550 (1,550/1,550)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001304 : C-type lectin
IPR008160 : Collagen triple helix repeat
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170313)
HIX0170313
HIT000384729_03
(
AK225599
)
(Pulmonary surfactant-associated protein A2; PSP-A; PSPA; SP-A; SP-A2; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-5; Precursor;)
genome : 81,316,264 - 81,320,163 (3,900)
query : 1 - 1,545 (1,545/1,545)
6 exons
identity = 0.995
3'(0.994;1.000;0.992;1.000;1.000;0.977)5'
coverage = 1.000
InterPro :
IPR001304 : C-type lectin
IPR008160 : Collagen triple helix repeat
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170313)
HIX0170313
HIT000353607_03 (
ENST00000372327
)
(Pulmonary surfactant-associated protein A2; PSP-A; PSPA; SP-A; SP-A2; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-5; Precursor;)
genome : 81,316,344 - 81,320,153 (3,810)
query : 1 - 1,425 (1,425/1,425)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170313)
HIX0170313
HIT000503421
(
BC157866
)
Representative transcript
(Pulmonary surfactant-associated protein A2; PSP-A; PSPA; SP-A; SP-A2; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-5; Precursor;)
genome : 81,316,344 - 81,320,153 (3,810)
query : 1 - 1,458 (1,458/1,458)
6 exons
identity = 0.997
3'(1.000;1.000;1.000;0.995;0.909;1.000)5'
coverage = 1.000
InterPro :
IPR001304 : C-type lectin
IPR008160 : Collagen triple helix repeat
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, mito 3, cyto 2, lyso 2, E.R._mito 2,
mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170313)
HIX0170313
HIT000503445
(
BC157890
)
(Pulmonary surfactant-associated protein A2; PSP-A; PSPA; SP-A; SP-A2; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-5; Precursor;)
genome : 81,316,344 - 81,320,153 (3,810)
query : 1 - 1,458 (1,458/1,458)
6 exons
identity = 0.993
3'(0.993;1.000;1.000;1.000;0.909;1.000)5'
coverage = 1.000
InterPro :
IPR001304 : C-type lectin
IPR008160 : Collagen triple helix repeat
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170313)
HIX0170313
HIT000503606
(
BC171875
)
(Pulmonary surfactant-associated protein A1; PSP-A; PSPA; SP-A; SP-A1; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-4; Precursor;)
genome : 81,316,344 - 81,320,153 (3,810)
query : 1 - 1,425 (1,425/1,425)
5 exons
identity = 0.989
3'(0.998;0.987;0.925;0.979;1.000)5'
coverage = 1.000
InterPro :
IPR001304 : C-type lectin
IPR008160 : Collagen triple helix repeat
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170313)
HIX0170313
HIT000492738
(
AK298114
)
(Pulmonary surfactant-associated protein A2 precursor.)
genome : 81,316,423 - 81,320,163 (3,741)
query : 1 - 1,239 (1,239/1,239)
6 exons
identity = 0.994
3'(0.999;1.000;0.983;0.947;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001304 : C-type lectin
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170313)
HIX0170313
HIT000492665
(
AK298041
)
(Pulmonary surfactant-associated protein A2 precursor.)
genome : 81,316,534 - 81,320,163 (3,630)
query : 1 - 1,182 (1,182/1,182)
6 exons
identity = 0.992
3'(0.999;1.000;1.000;0.959;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001304 : C-type lectin
IPR008160 : Collagen triple helix repeat
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170313)
HIX0170313
HIT000492698
(
AK298074
)
(Pulmonary surfactant-associated protein A2; PSP-A; PSPA; SP-A; SP-A2; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-5; Precursor;)
genome : 81,316,540 - 81,320,163 (3,624)
query : 1 - 995 (995/995)
5 exons
identity = 0.993
3'(1.000;1.000;0.905;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001304 : C-type lectin
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 7, mito 5, cyto_nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170313)
HIX0170313
HIT000191428_03
(
K03475
)
(Pulmonary surfactant-associated protein A2; PSP-A; PSPA; SP-A; SP-A2; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-5; Precursor;)
genome : 81,316,865 - 81,320,151 (3,287)
query : 3 - 935 (933/935)
6 exons
identity = 0.997
3'(1.000;1.000;0.992;1.000;0.968;0.969)5'
coverage = 0.998
InterPro :
IPR001304 : C-type lectin
IPR008160 : Collagen triple helix repeat
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170313)
HIX0170313
HIT000499805
(
AK316192
)
(Pulmonary surfactant-associated protein A2; PSP-A; PSPA; SP-A; SP-A2; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-5; Precursor;)
genome : 81,316,868 - 81,320,163 (3,296)
query : 1 - 874 (874/874)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001304 : C-type lectin
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, mito 4, cyto 2, E.R._mito 2, mito_pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170313)
HIX0170313
HIT000386644_03
(
BC111571
)
(Pulmonary surfactant-associated protein A2; PSP-A; PSPA; SP-A; SP-A2; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-5; Precursor;)
genome : 81,316,943 - 81,320,142 (3,200)
query : 1 - 845 (845/845)
6 exons
identity = 0.998
3'(0.995;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001304 : C-type lectin
IPR008160 : Collagen triple helix repeat
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170313)
HIX0170313
HIT000432045_03
(
AK313179
)
(Pulmonary surfactant-associated protein A2; PSP-A; PSPA; SP-A; SP-A2; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-5; Precursor;)
genome : 81,316,965 - 81,320,163 (3,199)
query : 1 - 847 (847/847)
6 exons
identity = 0.993
3'(0.997;1.000;0.992;0.995;0.909;1.000)5'
coverage = 1.000
InterPro :
IPR001304 : C-type lectin
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, mito 3, cyto 2, lyso 2, E.R._mito 2,
mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170313)
HIX0170313
HIT000514975 (
ENST00000417041
)
(Pulmonary surfactant-associated protein A2 precursor.)
genome : 81,317,238 - 81,320,153 (2,916)
query : 1 - 726 (726/726)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170313)
HIX0170313
HIT000595550 (
ENST00000492049
)
(Pulmonary surfactant-associated protein A2 precursor.)
genome : 81,318,641 - 81,319,590 (950)
query : 1 - 644 (644/644)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170313)
HIX0170313
HIT000216336_03
(
S69680
)
(Non-protein coding transcript.)
genome : 81,319,170 - 81,320,163 (994)
query : 1 - 167 (167/167)
3 exons
identity = 0.994
3'(0.989;1.000;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170313)
HIX0170313
HIT000216337_05
(
S69681
)
(Non-protein coding transcript.)
genome : 81,319,170 - 81,320,163 (994)
query : 1 - 170 (170/170)
3 exons
identity = 0.976
3'(0.989;0.909;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170313)
HIX0170313
HIT000216338_03
(
S69683
)
(Pulmonary surfactant-associated protein A2; PSP-A; PSPA; SP-A; SP-A2; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-5; Precursor;)
genome : 81,319,170 - 81,320,163 (994)
query : 1 - 210 (210/210)
3 exons
identity = 0.981
3'(0.989;0.959;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170313)
HIX0170313
HIT000216347_03
(
S69791
)
(Pulmonary surfactant-associated protein A2; PSP-A; PSPA; SP-A; SP-A2; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-5; Precursor;)
genome : 81,319,170 - 81,320,163 (994)
query : 1 - 207 (207/207)
3 exons
identity = 0.995
3'(0.989;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170313)
HIX0170313
HIT000216339_05
(
S69685
)
(Non-protein coding transcript.)
genome : 81,319,170 - 81,320,158 (989)
query : 1 - 132 (132/132)
2 exons
identity = 0.992
3'(0.989;1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170313)
HIX0170558
HIT000504028 (
ENST00000402234
)
(C-type lectin domain containing protein.)
genome : 81,342,054 - 81,344,633 (2,580)
query : 1 - 644 (644/644)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 16, cyto 11, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170558)
HIX0171081
HIT000544363 (
ENST00000446429
)
(C-type lectin domain containing protein.)
genome : 81,355,050 - 81,355,416 (367)
query : 1 - 367 (367/367)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto_nucl 8.5, cyto 6, nucl 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171081)
HIX0008972
HIT000492658
(
AK298034
)
(Pulmonary surfactant-associated protein A1 isoform 4 precursor.)
genome : 81,370,695 - 81,374,435 (3,741)
query : 3 - 1,187 (1,185/1,187)
5 exons
identity = 0.998
5'(1.000;1.000;0.941;1.000;1.000)3'
coverage = 0.998
InterPro :
IPR001304 : C-type lectin
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008972)
HIX0008972
HIT000423500_03
(
AK290703
)
Representative transcript
(Pulmonary surfactant-associated protein A1; PSP-A; PSPA; SP-A; SP-A1; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-4; Precursor;)
genome : 81,370,695 - 81,373,954 (3,260)
query : 3 - 961 (959/961)
6 exons
identity = 0.999
5'(1.000;1.000;0.995;1.000;1.000;1.000)3'
coverage = 0.998
InterPro :
IPR001304 : C-type lectin
IPR008160 : Collagen triple helix repeat
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008972)
HIX0008972
HIT000202102_03 (
NM_005411
)
(Pulmonary surfactant-associated protein A1; PSP-A; PSPA; SP-A; SP-A1; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-4; Precursor;)
genome : 81,370,695 - 81,375,199 (4,505)
query : 1 - 2,215 (2,215/2,230)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008972)
HIX0008972
HIT000485117 (
NM_001093770
)
(Pulmonary surfactant-associated protein A1; PSP-A; PSPA; SP-A; SP-A1; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-4; Precursor;)
genome : 81,370,695 - 81,375,199 (4,505)
query : 1 - 2,204 (2,204/2,219)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008972)
HIX0008972
HIT000654063 (
NM_001164644
)
(Pulmonary surfactant-associated protein A1; PSP-A; PSPA; SP-A; SP-A1; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-4; Precursor;)
genome : 81,370,695 - 81,375,199 (4,505)
query : 1 - 2,174 (2,174/2,189)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008972)
HIX0008972
HIT000654064 (
NM_001164645
)
(Pulmonary surfactant-associated protein A1 isoform 3 precursor.)
genome : 81,370,695 - 81,375,199 (4,505)
query : 1 - 2,060 (2,060/2,075)
6 exons
identity = 0.997
5'(1.000;1.000;0.991;0.900;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008972)
HIX0008972
HIT000654065 (
NM_001164646
)
(Pulmonary surfactant-associated protein A1 isoform 4 precursor.)
genome : 81,370,695 - 81,375,199 (4,505)
query : 1 - 2,068 (2,068/2,083)
6 exons
identity = 0.997
5'(1.000;1.000;0.991;0.900;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008972)
HIX0008972
HIT000654066 (
NM_001164647
)
(Pulmonary surfactant-associated protein A1; PSP-A; PSPA; SP-A; SP-A1; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-4; Precursor;)
genome : 81,370,695 - 81,375,199 (4,505)
query : 1 - 2,144 (2,144/2,159)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008972)
HIX0008972
HIT000481807_03 (
ENST00000398636
)
(Pulmonary surfactant-associated protein A1; PSP-A; PSPA; SP-A; SP-A1; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-4; Precursor;)
genome : 81,370,695 - 81,375,196 (4,502)
query : 1 - 2,212 (2,212/2,212)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008972)
HIX0008972
HIT000526310 (
ENST00000428376
)
(Pulmonary surfactant-associated protein A1; PSP-A; PSPA; SP-A; SP-A1; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-4; Precursor;)
genome : 81,370,695 - 81,375,196 (4,502)
query : 1 - 2,141 (2,141/2,141)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008972)
HIX0008972
HIT000652895
(
HQ021433
)
(Pulmonary surfactant-associated protein A1; PSP-A; PSPA; SP-A; SP-A1; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-4; Precursor;)
genome : 81,370,696 - 81,375,162 (4,467)
query : 2 - 2,107 (2,106/2,107)
5 exons
identity = 0.996
5'(1.000;0.995;0.992;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR001304 : C-type lectin
IPR008160 : Collagen triple helix repeat
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, mito 3, cyto 2, lyso 2, E.R._mito 2,
mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008972)
HIX0008972
HIT000652896
(
HQ021434
)
(Pulmonary surfactant-associated protein A1; PSP-A; PSPA; SP-A; SP-A1; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-4; Precursor;)
genome : 81,370,696 - 81,375,162 (4,467)
query : 2 - 2,118 (2,117/2,118)
5 exons
identity = 0.991
5'(1.000;0.995;1.000;1.000;0.989)3'
coverage = 1.000
InterPro :
IPR001304 : C-type lectin
IPR008160 : Collagen triple helix repeat
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008972)
HIX0008972
HIT000652897
(
HQ021435
)
(Pulmonary surfactant-associated protein A1; PSP-A; PSPA; SP-A; SP-A1; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-4; Precursor;)
genome : 81,370,696 - 81,375,162 (4,467)
query : 2 - 2,106 (2,105/2,106)
5 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR001304 : C-type lectin
IPR008160 : Collagen triple helix repeat
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008972)
HIX0008972
HIT000652898
(
HQ021436
)
(Pulmonary surfactant-associated protein A1; PSP-A; PSPA; SP-A; SP-A1; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-4; Precursor;)
genome : 81,370,696 - 81,375,162 (4,467)
query : 2 - 2,106 (2,105/2,106)
5 exons
identity = 0.996
5'(1.000;1.000;0.992;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR001304 : C-type lectin
IPR008160 : Collagen triple helix repeat
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008972)
HIX0008972
HIT000652899
(
HQ021437
)
(Pulmonary surfactant-associated protein A1; PSP-A; PSPA; SP-A; SP-A1; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-4; Precursor;)
genome : 81,370,696 - 81,375,162 (4,467)
query : 2 - 2,189 (2,188/2,189)
6 exons
identity = 0.991
5'(1.000;1.000;0.995;1.000;1.000;0.989)3'
coverage = 1.000
InterPro :
IPR001304 : C-type lectin
IPR008160 : Collagen triple helix repeat
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008972)
HIX0008972
HIT000652900
(
HQ021438
)
(Pulmonary surfactant-associated protein A1; PSP-A; PSPA; SP-A; SP-A1; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-4; Precursor;)
genome : 81,370,696 - 81,375,162 (4,467)
query : 2 - 2,177 (2,176/2,177)
6 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR001304 : C-type lectin
IPR008160 : Collagen triple helix repeat
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008972)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AF087691
Rattus
sp. (Rat) : BC085353
Monodelphis
sp. (Opossum) : ENSMODT00000001876
Pan
sp. (Chimpanzee) : XM_001152394
Danio
sp. (Zebrafish) : XM_690255
HIX0008972
HIT000652901
(
HQ021439
)
(Pulmonary surfactant-associated protein A1; PSP-A; PSPA; SP-A; SP-A1; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-4; Precursor;)
genome : 81,370,696 - 81,375,162 (4,467)
query : 2 - 2,177 (2,176/2,177)
6 exons
identity = 0.996
5'(1.000;1.000;1.000;0.992;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR001304 : C-type lectin
IPR008160 : Collagen triple helix repeat
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008972)
HIX0008972
HIT000652902
(
HQ021440
)
(Pulmonary surfactant-associated protein A1; PSP-A; PSPA; SP-A; SP-A1; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-4; Precursor;)
genome : 81,370,696 - 81,375,162 (4,467)
query : 2 - 2,178 (2,177/2,178)
6 exons
identity = 0.991
5'(1.000;1.000;0.995;1.000;1.000;0.989)3'
coverage = 1.000
InterPro :
IPR001304 : C-type lectin
IPR008160 : Collagen triple helix repeat
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008972)
HIX0008972
HIT000652903
(
HQ021441
)
(Pulmonary surfactant-associated protein A1; PSP-A; PSPA; SP-A; SP-A1; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-4; Precursor;)
genome : 81,370,696 - 81,375,162 (4,467)
query : 2 - 2,166 (2,165/2,166)
6 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
InterPro :
IPR001304 : C-type lectin
IPR008160 : Collagen triple helix repeat
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008972)
HIX0008972
HIT000652904
(
HQ021442
)
(Pulmonary surfactant-associated protein A1; PSP-A; PSPA; SP-A; SP-A1; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-4; Precursor;)
genome : 81,370,696 - 81,375,162 (4,467)
query : 2 - 2,166 (2,165/2,166)
6 exons
identity = 0.996
5'(1.000;1.000;1.000;0.992;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR001304 : C-type lectin
IPR008160 : Collagen triple helix repeat
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008972)
HIX0008972
HIT000722402
(
JX502764
)
(Pulmonary surfactant-associated protein A1; PSP-A; PSPA; SP-A; SP-A1; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-4; Precursor;)
genome : 81,370,696 - 81,375,162 (4,467)
query : 2 - 2,178 (2,177/2,178)
6 exons
identity = 0.997
5'(1.000;1.000;0.995;1.000;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR001304 : C-type lectin
IPR008160 : Collagen triple helix repeat
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008972)
HIX0008972
HIT000722403
(
JX502765
)
(Pulmonary surfactant-associated protein A1; PSP-A; PSPA; SP-A; SP-A1; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-4; Precursor;)
genome : 81,370,696 - 81,375,162 (4,467)
query : 2 - 2,167 (2,166/2,167)
6 exons
identity = 0.997
5'(1.000;1.000;0.995;1.000;1.000;0.996)3'
coverage = 1.000
InterPro :
IPR001304 : C-type lectin
IPR008160 : Collagen triple helix repeat
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008972)
HIX0008972
HIT000492653
(
AK298029
)
(Pulmonary surfactant-associated protein A1; PSP-A; PSPA; SP-A; SP-A1; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-4; Precursor;)
genome : 81,370,695 - 81,374,629 (3,935)
query : 1 - 1,534 (1,534/1,534)
5 exons
identity = 0.990
5'(1.000;1.000;0.992;1.000;0.987)3'
coverage = 1.000
InterPro :
IPR001304 : C-type lectin
IPR008160 : Collagen triple helix repeat
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008972)
HIX0008972
HIT000492626
(
AK298002
)
(Pulmonary surfactant-associated protein A1 isoform 2 precursor.)
genome : 81,370,695 - 81,374,400 (3,706)
query : 1 - 1,272 (1,272/1,272)
6 exons
identity = 0.982
5'(1.000;1.000;1.000;0.900;1.000;0.982)3'
coverage = 1.000
InterPro :
IPR001304 : C-type lectin
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008972)
HIX0008972
HIT000353588_03 (
ENST00000372308
)
(Pulmonary surfactant-associated protein A1; PSP-A; PSPA; SP-A; SP-A1; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-4; Precursor;)
genome : 81,370,695 - 81,373,858 (3,164)
query : 1 - 863 (863/865)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008972)
HIX0008972
HIT000216340_03
(
S69686
)
(Non-protein coding transcript.)
genome : 81,370,695 - 81,371,651 (957)
query : 1 - 137 (137/137)
2 exons
identity = 0.993
5'(1.000;0.989)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008972)
HIX0008972
HIT000499809
(
AK316196
)
(Pulmonary surfactant-associated protein A1; PSP-A; PSPA; SP-A; SP-A1; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-4; Precursor;)
genome : 81,370,696 - 81,374,450 (3,755)
query : 1 - 1,130 (1,130/1,130)
3 exons
identity = 0.967
5'(1.000;0.824;0.985)3'
coverage = 1.000
InterPro :
IPR001304 : C-type lectin
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 8.5, extr_plas 8.5, cyto_nucl 8
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008972)
HIX0008972
HIT000353593_04 (
ENST00000372313
)
(Pulmonary surfactant-associated protein A1; PSP-A; PSPA; SP-A; SP-A1; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-4; Precursor;)
genome : 81,370,698 - 81,374,268 (3,571)
query : 1 - 1,015 (1,015/1,015)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto_nucl 7.5, nucl 5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008972)
HIX0008972
HIT000492716
(
AK298092
)
(Pulmonary surfactant-associated protein A1; PSP-A; PSPA; SP-A; SP-A1; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-4; Precursor;)
genome : 81,370,698 - 81,374,268 (3,571)
query : 1 - 1,015 (1,015/1,015)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR001304 : C-type lectin
IPR008160 : Collagen triple helix repeat
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 23, cyto_nucl 7.5, nucl 5, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008972)
HIX0008972
HIT000428384_03
(
AK309518
)
(Pulmonary surfactant-associated protein A2 precursor.)
genome : 81,370,700 - 81,373,988 (3,289)
query : 1 - 1,005 (1,005/1,005)
5 exons
identity = 0.995
5'(1.000;1.000;0.990;0.927;1.000)3'
coverage = 1.000
InterPro :
IPR001304 : C-type lectin
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 13, cyto_nucl 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008972)
HIX0008972
HIT000216339_06
(
S69685
)
(Non-protein coding transcript.)
genome : 81,370,700 - 81,371,651 (952)
query : 1 - 132 (132/132)
2 exons
identity = 0.992
5'(1.000;0.989)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008972)
HIX0008972
HIT000216341_03
(
S69687
)
(Pulmonary surfactant-associated protein A2; PSP-A; PSPA; SP-A; SP-A2; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-5; Precursor;)
genome : 81,370,700 - 81,371,651 (952)
query : 1 - 192 (192/192)
3 exons
identity = 0.995
5'(1.000;1.000;0.989)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008972)
HIX0008972
HIT000216342_03
(
S69688
)
(Pulmonary surfactant-associated protein A2; PSP-A; PSPA; SP-A; SP-A2; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-5; Precursor;)
genome : 81,370,700 - 81,371,651 (952)
query : 1 - 195 (195/195)
3 exons
identity = 0.995
5'(1.000;1.000;0.989)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008972)
HIX0008972
HIT000216343_03
(
S69690
)
(Pulmonary surfactant-associated protein A2; PSP-A; PSPA; SP-A; SP-A2; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-5; Precursor;)
genome : 81,370,700 - 81,371,651 (952)
query : 1 - 203 (203/203)
3 exons
identity = 0.995
5'(1.000;1.000;0.989)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, nucl 5, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008972)
HIX0008972
HIT000040151
(
BC026229
)
(Pulmonary surfactant-associated protein A; PSAP; PSP-A; SP-A; Precursor;)
genome : 81,370,701 - 81,375,175 (4,475)
query : 1 - 1,663 (1,663/1,693)
5 exons
identity = 0.968
5'(1.000;1.000;1.000;0.914;0.999)3'
coverage = 0.999
InterPro :
IPR001304 : C-type lectin
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008972)
HIX0008972
HIT000517404 (
ENST00000419470
)
(Pulmonary surfactant-associated protein A1; PSP-A; PSPA; SP-A; SP-A1; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-4; Precursor;)
genome : 81,370,701 - 81,373,954 (3,254)
query : 1 - 953 (953/953)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 31
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008972)
HIX0008972
HIT000194237_03
(
M13686
)
(Pulmonary surfactant-associated protein A1; PSP-A; PSPA; SP-A; SP-A1; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-4; Precursor;)
genome : 81,370,707 - 81,373,969 (3,263)
query : 3 - 935 (933/935)
6 exons
identity = 0.996
5'(1.000;0.968;0.995;0.992;1.000;0.998)3'
coverage = 0.998
InterPro :
IPR001304 : C-type lectin
IPR008160 : Collagen triple helix repeat
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, mito 3, cyto 2, lyso 2, E.R._mito 2,
mito_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008972)
HIX0008972
HIT000477975_03 (
ENST00000394569
)
(Pulmonary surfactant-associated protein A1; PSP-A; PSPA; SP-A; SP-A1; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-4; Precursor;)
genome : 81,370,707 - 81,375,197 (4,491)
query : 1 - 2,160 (2,160/2,160)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008972)
HIX0008972
HIT000527892 (
ENST00000429958
)
(Pulmonary surfactant-associated protein A1; PSP-A; PSPA; SP-A; SP-A1; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-4; Precursor;)
genome : 81,370,709 - 81,373,596 (2,888)
query : 1 - 527 (527/527)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008972)
HIX0008972
HIT000537198 (
ENST00000439264
)
(Pulmonary surfactant-associated protein A1; PSP-A; PSPA; SP-A; SP-A1; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-4; Precursor;)
genome : 81,370,711 - 81,373,596 (2,886)
query : 1 - 596 (596/596)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008972)
HIX0008972
HIT000386643_03
(
BC111570
)
(Pulmonary surfactant-associated protein A1; PSP-A; PSPA; SP-A; SP-A1; 35 kDa pulmonary surfactant-associated protein; Alveolar proteinosis protein; Collectin-4; Precursor;)
genome : 81,370,716 - 81,373,891 (3,176)
query : 1 - 815 (815/815)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR001304 : C-type lectin
IPR008160 : Collagen triple helix repeat
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008972)
HIX0008972
HIT000590649 (
ENST00000486922
)
(Pulmonary surfactant-associated protein A1 isoform 3 precursor.)
genome : 81,370,717 - 81,371,654 (938)
query : 1 - 342 (342/342)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 12, cyto_nucl 9.5, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008972)
HIX0218978
HIT000091939_03
(
BC029913
)
Representative transcript
(Collagen triple helix repeat containing protein.)
genome : 81,371,075 - 81,373,596 (2,522)
query : 1 - 568 (568/568)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR008160 : Collagen triple helix repeat
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218978)
HIX0170377
HIT000527004 (
ENST00000429070
)
(Conserved hypothetical protein.)
genome : 81,388,513 - 81,391,944 (3,432)
query : 1 - 606 (606/606)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
plas 26, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170377)
HIX0170377
HIT000519190 (
ENST00000421256
)
(Conserved hypothetical protein.)
genome : 81,390,511 - 81,391,942 (1,432)
query : 1 - 385 (385/385)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, plas 1, E.R. 1, pero 1, lyso 1
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170377)
HIX0209435
HIT000586893_01 (
ENST00000482985
)
(Hypothetical short protein.)
genome : 81,420,647 - 81,436,856 (16,210)
query : 1 - 941 (941/941)
5 exons
identity = 0.990
5'(1.000;0.898;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 6, nucl 3, mito 3, cyto_plas 3,
cyto_golg 3, mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0209435)
HIX0218949
HIT000707877 (
ENST00000596088
)
(Conserved hypothetical protein.)
genome : 81,422,844 - 81,526,080 (103,237)
query : 1 - 366 (366/366)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218949)
HIX0218949
HIT000712120 (
ENST00000600376
)
(Hypothetical short protein.)
genome : 81,427,753 - 81,526,080 (98,328)
query : 1 - 510 (510/510)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218949)
HIX0171261
HIT000026405
(
AL390163
)
Representative transcript
(Conserved hypothetical protein.)
genome : 81,440,439 - 81,443,850 (3,412)
query : 1 - 3,408 (3,408/3,425)
1 exon
identity = 0.997
3'(0.997)5'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, cyto_nucl 11, cyto 10.5, nucl 8.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171261)
HIX0171261
HIT000563547 (
NR_027512
)
(Conserved hypothetical protein.)
genome : 81,442,731 - 81,448,653 (5,923)
query : 1 - 5,923 (5,923/5,923)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, extr 9, plas 4, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171261)
HIX0171261
HIT000550107 (
ENST00000452173
)
(Conserved hypothetical protein.)
genome : 81,444,248 - 81,444,739 (492)
query : 1 - 492 (492/492)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, extr 9, plas 4, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171261)
HIX0171261
HIT000449957_03
(
DQ583426
)
(Non-protein coding transcript.)
genome : 81,445,367 - 81,445,396 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171261)
HIX0171261
HIT000453069_03
(
DQ586538
)
(Non-protein coding transcript.)
genome : 81,446,908 - 81,446,938 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171261)
HIX0218949
HIT000713108 (
ENST00000601369
)
(Hypothetical short protein.)
genome : 81,451,256 - 81,526,085 (74,830)
query : 1 - 616 (616/616)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 6, cyto 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218949)
HIX0170511
HIT000452315_06
(
DQ585784
)
Representative transcript
(Non-protein coding transcript.)
genome : 81,461,928 - 81,461,957 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170511)
HIX0170524
HIT000458145_05
(
DQ591614
)
Representative transcript
(Non-protein coding transcript.)
genome : 81,461,944 - 81,461,973 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170524)
HIX0170492
HIT000438958_06
(
DQ572427
)
Representative transcript
(Non-protein coding transcript.)
genome : 81,462,859 - 81,462,890 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170492)
HIX0035439
HIT000546069 (
ENST00000448135
)
(Nuclear Testis protein/FAM22 family protein.)
genome : 81,462,983 - 81,472,688 (9,706)
query : 1 - 2,273 (2,273/2,273)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10.5, cyto_mito 7.16667, nucl 7, plas 5.5,
extr_plas 4.5, mito_pero 3.83333, pero 3, extr 2.5, mito 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035439)
HIX0035439
HIT000527762 (
ENST00000429828
)
(Nuclear Testis protein/FAM22 family protein.)
genome : 81,462,983 - 81,472,507 (9,525)
query : 1 - 3,286 (3,286/3,286)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 9.5, nucl 9, cyto_mito 6.66667, plas 6.5,
extr_plas 4.5, mito_pero 3.33333, cysk_plas 3.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035439)
HIX0035439
HIT000353601 (
ENST00000372321
)
(Nuclear Testis protein/FAM22 family protein.)
genome : 81,463,035 - 81,474,437 (11,403)
query : 1 - 3,970 (3,970/3,970)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10.5, cyto_mito 7.16667, nucl 7, plas 5.5,
extr_plas 4.5, mito_pero 3.83333, pero 3, extr 2.5, mito 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035439)
HIX0170518
HIT000456179_06
(
DQ589648
)
Representative transcript
(Non-protein coding transcript.)
genome : 81,463,172 - 81,463,201 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170518)
HIX0035439
HIT000135161 (
ENST00000342531
)
(Nuclear Testis protein, N-terminal domain containing protein.)
genome : 81,466,084 - 81,472,511 (6,428)
query : 1 - 2,239 (2,239/2,239)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 16.5, extr_plas 10, E.R. 6, mito 4, plas 2.5,
cyto_mito 2.5, mito_nucl 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035439)
HIX0170468
HIT000323477_03
(
X74804
)
Representative transcript
(Non-protein coding transcript.)
genome : 81,506,050 - 81,506,131 (82)
query : 9 - 90 (82/101)
1 exon
identity = 0.988
3'(0.988)5'
coverage = 0.911
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170468)
HIX0170447
HIT000070680_03
(
AF130084
)
Representative transcript
(Hypothetical short protein.)
genome : 81,507,261 - 81,509,543 (2,283)
query : 1 - 2,282 (2,282/2,296)
1 exon
identity = 0.999
3'(0.999)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, nucl 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170447)
HIX0170430
HIT000016611_03
(
AK091744
)
Representative transcript
(Domain of unknown function DUF1725 domain containing protein.)
genome : 81,522,331 - 81,524,958 (2,628)
query : 1 - 2,628 (2,628/2,628)
1 exon
identity = 0.998
3'(0.998)5'
coverage = 1.000
InterPro :
IPR013544 : Domain of unknown function DUF1725
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 16, cyto_nucl 14, nucl 8, mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170430)
HIX0017550
HIT000005343
(
AK022069
)
Representative transcript
(Conserved hypothetical protein.)
genome : 81,551,918 - 81,554,318 (2,401)
query : 2 - 2,404 (2,403/2,404)
1 exon
identity = 0.993
3'(0.993)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0017550)
HIX0035660
HIT000586893_02 (
ENST00000482985
)
(Hypothetical short protein.)
genome : 81,557,151 - 81,574,472 (17,322)
query : 1 - 941 (941/941)
5 exons
identity = 0.990
3'(0.997;1.000;0.954;0.973;0.990)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 6, nucl 3, mito 3, cyto_plas 3,
cyto_golg 3, mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035660)
HIX0035660
HIT000517631 (
ENST00000419697
)
(Hypothetical short protein.)
genome : 81,563,813 - 81,574,410 (10,598)
query : 1 - 513 (513/513)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 7, cyto_mito 6.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035660)
HIX0035660
HIT000528897 (
ENST00000430963
)
(Hypothetical short protein.)
genome : 81,563,813 - 81,565,878 (2,066)
query : 1 - 555 (555/555)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 7, cyto_mito 6.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035660)
HIX0035660
HIT000583963_01 (
ENST00000479920
)
(Hypothetical short protein.)
genome : 81,564,219 - 81,574,474 (10,256)
query : 1 - 448 (448/448)
4 exons
identity = 0.982
3'(1.000;0.986;0.971;0.991)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 11.5, cyto_nucl 11, cyto 7.5, mito 7, extr 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035660)
HIX0035660
HIT000598793 (
ENST00000495430
)
(Hypothetical short protein.)
genome : 81,564,241 - 81,586,350 (22,110)
query : 1 - 829 (829/829)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 11, extr 7, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035660)
HIX0035660
HIT000574916 (
ENST00000470445
)
(Hypothetical short protein.)
genome : 81,564,241 - 81,586,272 (22,032)
query : 1 - 624 (624/624)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 11, extr 7, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035660)
HIX0035660
HIT000586986 (
ENST00000483080
)
(Hypothetical short protein.)
genome : 81,564,241 - 81,586,240 (22,000)
query : 1 - 592 (592/592)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 11, extr 7, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035660)
HIX0035660
HIT000592433 (
ENST00000488805
)
(Hypothetical short protein.)
genome : 81,564,241 - 81,586,160 (21,920)
query : 1 - 428 (428/428)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 11, extr 7, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035660)
HIX0035660
HIT000599684 (
ENST00000496359
)
(Hypothetical short protein.)
genome : 81,564,241 - 81,586,109 (21,869)
query : 1 - 387 (387/387)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18, cyto_nucl 11, extr 7, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035660)
HIX0035660
HIT000581349 (
ENST00000477192
)
(Hypothetical short protein.)
genome : 81,564,241 - 81,585,538 (21,298)
query : 1 - 800 (800/800)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, cyto 9, cyto_nucl 7, mito 6, nucl 3,
E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035660)
HIX0035660
HIT000588626 (
ENST00000484794
)
(Non-protein coding transcript.)
genome : 81,564,241 - 81,574,400 (10,160)
query : 1 - 233 (233/233)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035660)
HIX0035316
HIT000657914_02 (
NR_029407
)
(Hypothetical protein.)
genome : 81,585,658 - 81,587,358 (1,701)
query : 1 - 1,701 (1,701/1,712)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 13.5, cyto 10.5, extr 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035316)
HIX0035316
HIT000065454
(
AF064843
)
Representative transcript
(Hypothetical short protein.)
genome : 81,585,662 - 81,587,307 (1,646)
query : 2 - 1,667 (1,666/1,668)
1 exon
identity = 0.972
5'(0.972)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 26, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035316)
HIX0218993
HIT000452315_07
(
DQ585784
)
Representative transcript
(Non-protein coding transcript.)
genome : 81,600,056 - 81,600,085 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218993)
HIX0170525
HIT000458145_06
(
DQ591614
)
Representative transcript
(Non-protein coding transcript.)
genome : 81,600,072 - 81,600,101 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170525)
HIX0170493
HIT000438958_07
(
DQ572427
)
Representative transcript
(Non-protein coding transcript.)
genome : 81,600,990 - 81,601,021 (32)
query : 1 - 32 (32/32)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170493)
HIX0190625
HIT000714700 (
ENST00000602967
)
(Nuclear Testis protein/FAM22 family protein.)
genome : 81,601,114 - 81,610,632 (9,519)
query : 1 - 3,623 (3,623/3,623)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 11.5, cyto_mito 7.66667, nucl 7, plas 5.5,
extr_plas 4.5, mito_pero 3.33333, extr 2.5, mito 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0190625)
HIX0190625
HIT000527918 (
ENST00000429984
)
(Nuclear Testis protein/FAM22 family protein.)
genome : 81,601,114 - 81,610,628 (9,515)
query : 1 - 3,286 (3,286/3,286)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 9.5, nucl 9, cyto_mito 6.66667, plas 6.5,
extr_plas 4.5, mito_pero 3.33333, cysk_plas 3.33333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0190625)
HIX0170519
HIT000456179_07
(
DQ589648
)
Representative transcript
(Non-protein coding transcript.)
genome : 81,601,303 - 81,601,332 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170519)
HIX0201581
HIT000554650 (
ENST00000456716
)
(Conserved hypothetical protein.)
genome : 81,620,329 - 81,621,562 (1,234)
query : 1 - 1,234 (1,234/1,234)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto 6, nucl 3, cyto_pero 3, cyto_plas 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201581)
HIX0219008
HIT000556207_03 (
ENST00000458273
)
(Proteinase inhibitor I29, cathepsin propeptide domain containing protein.)
genome : 81,630,131 - 81,633,659 (3,529)
query : 1 - 1,002 (1,002/1,002)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, mito 6, nucl 5, extr 3, E.R._mito 3,
mito_pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219008)
HIX0128320
HIT000481794 (
ENST00000398621
)
(Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid domain containing protein.)
genome : 81,651,904 - 81,652,931 (1,028)
query : 1 - 1,028 (1,028/1,028)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, extr 10, cyto_nucl 10, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0128320)
HIX0128320
pHIT000109193 ( pHIT000109193 )
Representative transcript
(Conserved hypothetical protein.)
genome : 81,652,045 - 81,652,931 (887)
query : 1 - 771 (771/771)
2 exons
InterPro :
IPR001330 : Prenyltransferase/squalene oxidase
IPR008930 : Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid
GO :
0003824 : Molecular Function : catalytic activity
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0128320)
CAGE tag :
T10R04DDC5B7
HIX0128320
HIT000114579_02 (
ENST00000296642
)
(Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid domain containing protein.)
genome : 81,652,095 - 81,652,795 (701)
query : 18 - 540 (523/552)
2 exons
identity = 0.966
3'(0.981;0.962)5'
coverage = 0.947
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto_nucl 8.66667, nucl 7, cyto 6,
cyto_pero 4.83333
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0128320)
HIX0035311
HIT000264556
(
BC071736
)
Representative transcript
(Ribosome biogenesis protein BMS1 homolog; Ribosome assembly protein BMS1 homolog;)
genome : 81,664,654 - 81,710,784 (46,131)
query : 1 - 1,962 (1,962/1,999)
8 exons
identity = 0.998
5'(0.993;1.000;0.995;1.000;1.000;0.989;1.000;
0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 10, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035311)
Ortholog candidate ( ->
Evola
)
Tetraodon
sp. (Tetraodon) : GSTENT00011777001
HIX0035311
HIT000551108 (
ENST00000453174
)
(Ribosome biogenesis protein BMS1 homolog; Ribosome assembly protein BMS1 homolog;)
genome : 81,664,654 - 81,691,557 (26,904)
query : 1 - 818 (818/818)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 10, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035311)
HIX0035311
HIT000659015 (
NR_033857
)
(Ribosome biogenesis protein BMS1 homolog; Ribosome assembly protein BMS1 homolog;)
genome : 81,664,654 - 81,691,557 (26,904)
query : 1 - 818 (818/818)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 10, extr 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035311)
HIX0035311
HIT000426717
(
AK307851
)
(Ribosome biogenesis protein BMS1 homolog; Ribosome assembly protein BMS1 homolog;)
genome : 81,664,662 - 81,667,610 (2,949)
query : 1 - 540 (540/540)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 17, cyto 10, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035311)
HIX0035311
HIT000062478
(
AF019382
)
(Mannose-binding protein A; MBP-A; 28 kDa mannan-binding protein monomeric subunit; pMBP-28; Mannan-binding lectin A; MBL-A; Mannose-binding lectin A; Precursor;)
genome : 81,679,934 - 81,682,875 (2,942)
query : 1 - 1,423 (1,423/1,423)
3 exons
identity = 0.996
5'(0.998;1.000;0.993)3'
coverage = 1.000
InterPro :
IPR001304 : C-type lectin
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, cyto_nucl 14.5, nucl 9, extr 3, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035311)
HIX0035311
HIT000367072 (
NR_002724
)
(Mannose-binding protein A; MBP-A; 28 kDa mannan-binding protein monomeric subunit; pMBP-28; Mannan-binding lectin A; MBL-A; Mannose-binding lectin A; Precursor;)
genome : 81,679,934 - 81,682,875 (2,942)
query : 1 - 1,424 (1,424/1,424)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 9, mito 4, nucl 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035311)
HIX0035311
HIT000584800 (
ENST00000480805
)
(Mannose-binding protein A; MBP-A; 28 kDa mannan-binding protein monomeric subunit; pMBP-28; Mannan-binding lectin A; MBL-A; Mannose-binding lectin A; Precursor;)
genome : 81,679,934 - 81,682,875 (2,942)
query : 1 - 1,424 (1,424/1,424)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 9, mito 4, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035311)
HIX0035311
HIT000600992 (
ENST00000497731
)
(Mannose-binding protein A; MBP-A; 28 kDa mannan-binding protein monomeric subunit; pMBP-28; Mannan-binding lectin A; MBL-A; Mannose-binding lectin A; Precursor;)
genome : 81,680,083 - 81,682,788 (2,706)
query : 1 - 741 (741/741)
4 exons
identity = 0.996
5'(1.000;0.983;0.985;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, cyto 5.5, mito 5, cyto_nucl 5, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035311)
HIX0035311
HIT000519823 (
ENST00000421889
)
(Conserved hypothetical protein.)
genome : 81,691,467 - 81,710,092 (18,626)
query : 1 - 642 (642/642)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 16, nucl 14.5, cyto 12.5, extr 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035311)
HIX0008974
HIT000039466
(
BC022318
)
Representative transcript
(Pulmonary surfactant-associated protein D; PSP-D; SP-D; Collectin-7; Lung surfactant protein D; Precursor;)
genome : 81,697,508 - 81,708,861 (11,354)
query : 2 - 1,272 (1,271/1,301)
8 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000;1.000;0.995;
1.000)5'
coverage = 0.998
InterPro :
IPR001304 : C-type lectin
IPR008160 : Collagen triple helix repeat
IPR015097 : Lung surfactant protein D coiled-coil trimerisation
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, E.R. 10, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008974)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC003705
Danio
sp. (Zebrafish) : BC095009
Danio
sp. (Zebrafish) : BC155073
Macaca
sp. (Macaque) : DQ457096
Canis
sp. (Dog) : ENSCAFT00000024968
Oryzias
sp. (Medaka) : ENSORLT00000005827
Pongo
sp. (Orangutan) : ENSPPYT00000002759
Bos
sp. (Cow) : X75911
Monodelphis
sp. (Opossum) : XM_001370166
Equus
sp. (Horse) : XM_001496642
Pan
sp. (Chimpanzee) : XR_021243
HIX0008974
HIT000199887 (
NM_003019
)
(Pulmonary surfactant-associated protein D; PSP-D; SP-D; Collectin-7; Lung surfactant protein D; Precursor;)
genome : 81,697,497 - 81,708,861 (11,365)
query : 1 - 1,282 (1,282/1,299)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, E.R. 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008974)
HIX0008974
HIT000353572 (
ENST00000372292
)
(Pulmonary surfactant-associated protein D; PSP-D; SP-D; Collectin-7; Lung surfactant protein D; Precursor;)
genome : 81,697,496 - 81,708,859 (11,364)
query : 1 - 1,281 (1,281/1,281)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, E.R. 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008974)
HIX0008974
HIT000322732
(
X65018
)
(Pulmonary surfactant-associated protein D; PSP-D; SP-D; Collectin-7; Lung surfactant protein D; Precursor;)
genome : 81,697,507 - 81,708,856 (11,350)
query : 134 - 1,400 (1,267/1,410)
8 exons
identity = 0.998
3'(1.000;1.000;1.000;0.991;1.000;1.000;0.990;
1.000)5'
coverage = 0.904
InterPro :
IPR001304 : C-type lectin
IPR008160 : Collagen triple helix repeat
IPR015097 : Lung surfactant protein D coiled-coil trimerisation
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008974)
HIX0008974
HIT000268818
(
CR541948
)
(Pulmonary surfactant-associated protein D; PSP-D; SP-D; Collectin-7; Lung surfactant protein D; Precursor;)
genome : 81,697,611 - 81,706,415 (8,805)
query : 1 - 1,125 (1,125/1,125)
7 exons
identity = 0.996
3'(0.997;1.000;1.000;0.991;0.991;1.000;0.995)5'
coverage = 1.000
InterPro :
IPR001304 : C-type lectin
IPR008160 : Collagen triple helix repeat
IPR015097 : Lung surfactant protein D coiled-coil trimerisation
IPR016186 : C-type lectin-like
IPR016187 : C-type lectin fold
IPR018378 : C-type lectin, conserved site
GO :
0030246 : Molecular Function : carbohydrate binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, E.R. 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008974)
HIX0008974
HIT000542318 (
ENST00000444384
)
(Pulmonary surfactant-associated protein D precursor.)
genome : 81,701,205 - 81,742,370 (41,166)
query : 1 - 659 (659/659)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008974)
HIX0025982
HIT000044478
(
AK124605
)
Representative transcript
(Conserved hypothetical protein.)
genome : 81,727,969 - 81,732,969 (5,001)
query : 1 - 5,003 (5,003/5,003)
1 exon
identity = 0.994
5'(0.994)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 28, lyso 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025982)
HIX0170758
HIT000522134 (
ENST00000424200
)
(Conserved hypothetical protein.)
genome : 81,741,595 - 81,741,968 (374)
query : 1 - 374 (374/374)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 19, nucl 10.5, cyto_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170758)
HIX0171221
HIT000554234 (
ENST00000456300
)
(Non-protein coding transcript.)
genome : 81,742,671 - 81,742,996 (326)
query : 1 - 326 (326/326)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171221)
HIX0128004
HIT000461138
(
DQ594607
)
Representative transcript
(Non-protein coding transcript.)
genome : 81,745,617 - 81,745,646 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0128004)
HIX0170681
HIT000515151 (
ENST00000417217
)
(Non-protein coding transcript.)
genome : 81,777,433 - 81,777,611 (179)
query : 1 - 179 (179/179)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170681)
HIX0171200
HIT000509953_03 (
ENST00000412019
)
(Sas10/Utp3/C1D family protein.)
genome : 81,784,493 - 81,784,918 (426)
query : 1 - 426 (426/426)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 21, mito 7, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171200)
HIX0171200
HIT000552947_01 (
ENST00000455013
)
(Sas10/Utp3/C1D family protein.)
genome : 81,784,493 - 81,784,915 (423)
query : 1 - 423 (423/423)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
nucl 21, mito 7, cyto 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171200)
HIX0170690
HIT000516101_01 (
ENST00000418167
)
(Sas10/Utp3/C1D family protein.)
genome : 81,791,724 - 81,792,149 (426)
query : 1 - 426 (426/426)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, extr 5, nucl 3, mito 3, mito_nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170690)
HIX0170690
HIT000633885_02 (
ENST00000534840
)
(Sas10/Utp3/C1D family protein.)
genome : 81,791,729 - 81,792,149 (421)
query : 1 - 421 (421/426)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 0.988
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, nucl 4, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170690)
HIX0171205
HIT000553363_01 (
ENST00000455429
)
(Sas10/Utp3/C1D family protein.)
genome : 81,800,377 - 81,800,799 (423)
query : 1 - 423 (423/423)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 16, nucl 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171205)
HIX0008975
HIT000563490 (
NR_027428
)
(Conserved hypothetical protein.)
genome : 81,805,990 - 81,838,949 (32,960)
query : 1 - 4,045 (4,045/4,059)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, plas 3, E.R. 3, pero 1.5, mito_pero 1.5,
E.R._golg 1.5, cysk_plas 1.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008975)
HIX0008975
HIT000563491 (
NR_027429
)
(Conserved hypothetical protein.)
genome : 81,805,990 - 81,838,949 (32,960)
query : 1 - 3,958 (3,958/3,972)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, plas 3, E.R. 3, pero 1.5, mito_pero 1.5,
E.R._golg 1.5, cysk_plas 1.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008975)
HIX0008975
HIT000563492 (
NR_027430
)
(Conserved hypothetical protein.)
genome : 81,805,990 - 81,838,949 (32,960)
query : 1 - 3,834 (3,834/3,848)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, plas 3, E.R. 3, pero 1.5, mito_pero 1.5,
E.R._golg 1.5, cysk_plas 1.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008975)
HIX0008975
HIT000563493 (
NR_027431
)
(Conserved hypothetical protein.)
genome : 81,805,990 - 81,838,949 (32,960)
query : 1 - 3,808 (3,808/3,822)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;0.992;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, plas 3, E.R. 3, pero 1.5, mito_pero 1.5,
E.R._golg 1.5, cysk_plas 1.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008975)
HIX0008975
HIT000563494 (
NR_027432
)
(Conserved hypothetical protein.)
genome : 81,805,990 - 81,838,949 (32,960)
query : 1 - 3,721 (3,721/3,735)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, plas 3, E.R. 3, pero 1.5, mito_pero 1.5,
E.R._golg 1.5, cysk_plas 1.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008975)
HIX0008975
HIT000530004 (
ENST00000432070
)
(Conserved hypothetical protein.)
genome : 81,806,616 - 81,838,668 (32,053)
query : 1 - 3,051 (3,051/3,051)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, plas 3, E.R. 3, pero 1.5, mito_pero 1.5,
E.R._golg 1.5, cysk_plas 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008975)
HIX0008975
HIT000510232 (
ENST00000412298
)
(Conserved hypothetical protein.)
genome : 81,806,616 - 81,838,651 (32,036)
query : 1 - 3,121 (3,121/3,121)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, plas 3, E.R. 3, pero 1.5, mito_pero 1.5,
E.R._golg 1.5, cysk_plas 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008975)
HIX0008975
HIT000546663 (
ENST00000448729
)
(Conserved hypothetical protein.)
genome : 81,806,616 - 81,838,600 (31,985)
query : 1 - 2,746 (2,746/2,746)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, plas 3, E.R. 3, pero 1.5, mito_pero 1.5,
E.R._golg 1.5, cysk_plas 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008975)
HIX0008975
HIT000091462
(
BC028046
)
(UPF0764 protein C16orf89; Precursor;)
genome : 81,807,477 - 81,838,600 (31,124)
query : 11 - 1,895 (1,885/1,909)
4 exons
identity = 0.998
3'(0.999;0.995;1.000;1.000)5'
coverage = 0.995
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, plas 3, E.R. 3, pero 1.5, mito_pero 1.5,
E.R._golg 1.5, cysk_plas 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008975)
HIX0008975
HIT000004947
(
AK021673
)
(Conserved hypothetical protein.)
genome : 81,807,478 - 81,838,668 (31,191)
query : 1 - 2,189 (2,189/2,189)
5 exons
identity = 0.998
3'(0.998;0.995;1.000;1.000;0.995)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, plas 3, E.R. 3, pero 1.5, mito_pero 1.5,
E.R._golg 1.5, cysk_plas 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008975)
HIX0008975
HIT000021613
(
AK096758
)
Representative transcript
(Conserved hypothetical protein.)
genome : 81,807,478 - 81,838,651 (31,174)
query : 1 - 2,259 (2,259/2,259)
6 exons
identity = 0.998
3'(0.999;0.995;1.000;0.989;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, plas 3, E.R. 3, pero 1.5, mito_pero 1.5,
E.R._golg 1.5, cysk_plas 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008975)
HIX0008975
HIT000427677
(
AK308811
)
(Conserved hypothetical protein.)
genome : 81,807,661 - 81,820,689 (13,029)
query : 21 - 1,603 (1,583/1,603)
3 exons
identity = 0.997
3'(0.997;1.000;1.000)5'
coverage = 0.988
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, E.R. 3, pero 1.5, mito_pero 1.5,
E.R._golg 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008975)
HIX0008975
HIT000429127
(
AK310261
)
(Conserved hypothetical protein.)
genome : 81,808,419 - 81,838,423 (30,005)
query : 1 - 982 (982/982)
4 exons
identity = 0.997
3'(0.996;0.995;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 25, E.R. 3, plas 2, E.R._mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008975)
HIX0008975
HIT000428520
(
AK309654
)
(Transmembrane protein 254 isoform 6.)
genome : 81,808,523 - 81,838,572 (30,050)
query : 1 - 924 (924/924)
5 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;0.989)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, cyto_nucl 7.5, cyto 7, mito_pero 7, nucl 6,
E.R._mito 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008975)
HIX0008975
HIT000429048
(
AK310182
)
(Conserved hypothetical protein.)
genome : 81,808,637 - 81,838,651 (30,015)
query : 1 - 863 (863/863)
5 exons
identity = 0.999
3'(1.000;1.000;1.000;0.992;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 13, nucl 9, cyto_nucl 8, cyto 5, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008975)
HIX0008976
HIT000428291
(
AK309425
)
(Transmembrane protein 254 isoform 5.)
genome : 81,838,198 - 81,850,980 (12,783)
query : 1 - 1,032 (1,032/1,032)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, nucl 12, cyto 10.5, cyto_pero 7.83333,
extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008976)
HIX0008976
HIT000209737 (
NM_025125
)
(Transmembrane protein 254 isoform 1.)
genome : 81,838,402 - 81,852,307 (13,906)
query : 1 - 2,060 (2,060/2,079)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, pero 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008976)
HIX0008976
HIT000724650 (
NM_001270370
)
(Transmembrane protein 254 isoform 4.)
genome : 81,838,402 - 81,852,307 (13,906)
query : 1 - 2,140 (2,140/2,159)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10, cyto_nucl 8.5, cyto 8, mito 8, nucl 5,
extr_plas 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008976)
HIX0008976
HIT000724651 (
NM_001270371
)
(Transmembrane protein 254 isoform 5.)
genome : 81,838,402 - 81,852,307 (13,906)
query : 1 - 2,155 (2,155/2,174)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, mito 7.5, mito_pero 5.5, cyto 2.5,
cyto_nucl 2.5, pero 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008976)
HIX0008976
HIT000724652 (
NM_001270372
)
(Transmembrane protein 254 isoform 1.)
genome : 81,838,402 - 81,852,307 (13,906)
query : 1 - 2,073 (2,073/2,092)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, nucl 5, cyto_nucl 4.5, mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008976)
HIX0008976
HIT000724653 (
NM_001270373
)
(Transmembrane protein 254 isoform 6.)
genome : 81,838,402 - 81,852,307 (13,906)
query : 1 - 2,112 (2,112/2,131)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, nucl 5, cyto_nucl 4.5, mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008976)
HIX0008976
HIT000576991 (
ENST00000472622
)
(Transmembrane protein 254 isoform 1.)
genome : 81,838,402 - 81,851,058 (12,657)
query : 1 - 824 (824/824)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, nucl 5, cyto_nucl 4.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008976)
HIX0008976
HIT000330316
(
AK222536
)
(Transmembrane protein 254 isoform 1.)
genome : 81,838,421 - 81,852,276 (13,856)
query : 1 - 2,010 (2,010/2,010)
4 exons
identity = 0.999
5'(1.000;0.981;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR028110 : Protein of unknown function DUF4499
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, pero 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008976)
HIX0008976
HIT000039429
(
BC022252
)
Representative transcript
(Transmembrane protein 254 isoform 1.)
genome : 81,838,426 - 81,852,307 (13,882)
query : 1 - 2,036 (2,036/2,100)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR028110 : Protein of unknown function DUF4499
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, pero 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008976)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK002441
Rattus
sp. (Rat) : BC086323
Bos
sp. (Cow) : BC114852
Pongo
sp. (Orangutan) : CR859483
Canis
sp. (Dog) : ENSCAFT00000024941
Equus
sp. (Horse) : ENSECAT00000014245
Macaca
sp. (Macaque) : ENSMMUT00000004271
Monodelphis
sp. (Opossum) : XM_001369449
Pan
sp. (Chimpanzee) : XM_507871
HIX0008976
HIT000353561 (
ENST00000372281
)
(Transmembrane protein 254 isoform 1.)
genome : 81,838,426 - 81,852,313 (13,888)
query : 1 - 2,042 (2,042/2,042)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, pero 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008976)
HIX0008976
HIT000006599
(
AK023325
)
(Transmembrane protein 254 isoform 1.)
genome : 81,838,426 - 81,852,303 (13,878)
query : 1 - 2,032 (2,032/2,032)
4 exons
identity = 0.998
5'(1.000;0.990;0.983;0.999)3'
coverage = 1.000
InterPro :
IPR028110 : Protein of unknown function DUF4499
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 22, pero 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008976)
HIX0008976
HIT000353557 (
ENST00000372277
)
(Transmembrane protein 254 isoform 4.)
genome : 81,838,426 - 81,850,168 (11,743)
query : 1 - 342 (342/342)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10, cyto_nucl 8.5, cyto 8, mito 8, nucl 5,
extr_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008976)
HIX0008976
HIT000353555 (
ENST00000372275
)
(Transmembrane protein 254 isoform 5.)
genome : 81,838,438 - 81,851,091 (12,654)
query : 1 - 860 (860/860)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, nucl 5, cyto_nucl 4.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008976)
HIX0008976
HIT000353554 (
ENST00000372274
)
(Transmembrane protein 254 isoform 6.)
genome : 81,838,448 - 81,850,694 (12,247)
query : 1 - 481 (481/481)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 10, cyto_nucl 8.5, cyto 8, mito 8, nucl 5,
extr_plas 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008976)
HIX0008976
HIT000268160
(
CR457310
)
(Transmembrane protein 254 isoform 1.)
genome : 81,838,456 - 81,850,671 (12,216)
query : 1 - 370 (370/372)
4 exons
identity = 0.995
5'(1.000;0.990;0.983;1.000)3'
coverage = 0.995
InterPro :
IPR028110 : Protein of unknown function DUF4499
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 17, extr 5, pero 5, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008976)
HIX0008976
HIT000495114
(
AK300490
)
(Transmembrane protein 254 isoform 2.)
genome : 81,838,769 - 81,851,542 (12,774)
query : 1 - 1,326 (1,326/1,326)
4 exons
identity = 0.997
5'(1.000;0.981;0.983;0.999)3'
coverage = 1.000
InterPro :
IPR028110 : Protein of unknown function DUF4499
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30.5, extr_plas 16
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008976)
HIX0008976
HIT000724647 (
NM_001270367
)
(Transmembrane protein 254 isoform 2.)
genome : 81,838,779 - 81,852,307 (13,529)
query : 1 - 2,081 (2,081/2,100)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 15, mito 6, mito_pero 5.5, plas 3, nucl 3,
pero 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008976)
HIX0008976
HIT000724648 (
NM_001270368
)
(Transmembrane protein 254 isoform 2.)
genome : 81,838,779 - 81,852,307 (13,529)
query : 1 - 2,094 (2,094/2,113)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 14, cyto 9.5, cyto_nucl 7, E.R._mito 7,
mito_pero 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008976)
HIX0008976
HIT000724649 (
NM_001270369
)
(Transmembrane protein 254 isoform 3.)
genome : 81,838,779 - 81,852,307 (13,529)
query : 1 - 2,133 (2,133/2,152)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 14, cyto 9.5, cyto_nucl 7, E.R._mito 7,
mito_pero 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008976)
HIX0008976
HIT000027395
(
AL832483
)
(Transmembrane protein 254 isoform 2.)
genome : 81,838,792 - 81,852,307 (13,516)
query : 1 - 2,068 (2,068/2,083)
4 exons
identity = 0.998
5'(1.000;0.990;1.000;0.998)3'
coverage = 0.993
InterPro :
IPR028110 : Protein of unknown function DUF4499
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14, mito 7, cyto_golg 7, pero 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008976)
HIX0008976
HIT000353553 (
ENST00000372273
)
(Transmembrane protein 254 isoform 2.)
genome : 81,838,792 - 81,852,313 (13,522)
query : 1 - 2,074 (2,074/2,074)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 14, mito 7, cyto_golg 7, pero 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008976)
HIX0008976
HIT000428846
(
AK309980
)
(Transmembrane protein 254 isoform 2.)
genome : 81,838,804 - 81,851,275 (12,472)
query : 1 - 1,036 (1,036/1,036)
4 exons
identity = 0.999
5'(1.000;1.000;1.000;0.999)3'
coverage = 1.000
InterPro :
IPR028110 : Protein of unknown function DUF4499
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 18, cyto_nucl 12.5, extr 7, nucl 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008976)
HIX0008976
HIT000724654 (
NM_001270374
)
(Transmembrane protein 254 isoform 7.)
genome : 81,839,001 - 81,852,307 (13,307)
query : 1 - 2,462 (2,462/2,481)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 6.5, cyto_nucl 6, cyto 4.5, mito 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008976)
HIX0008976
HIT000727374 (
NR_072984
)
(Transmembrane protein 254 isoform 7.)
genome : 81,839,001 - 81,852,307 (13,307)
query : 1 - 2,077 (2,077/2,096)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 18, nucl 8, cyto_nucl 6.5, cyto 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008976)
HIX0008976
HIT000727375 (
NR_072985
)
(Transmembrane protein 254 isoform 7.)
genome : 81,839,001 - 81,852,307 (13,307)
query : 1 - 2,084 (2,084/2,103)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 10, extr 7, plas 5, E.R._mito 3.5, E.R. 3,
pero 3, mito 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008976)
HIX0008976
HIT000727376 (
NR_072986
)
(Transmembrane protein 254 isoform 1.)
genome : 81,839,001 - 81,852,307 (13,307)
query : 1 - 1,982 (1,982/2,001)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 11, mito 9.5, extr_plas 9.5, plas 8
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008976)
HIX0008976
HIT000727377 (
NR_072987
)
(Transmembrane protein 254 isoform 1.)
genome : 81,839,001 - 81,852,307 (13,307)
query : 1 - 2,034 (2,034/2,053)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008976)
HIX0008976
HIT000027309
(
AL832397
)
(Transmembrane protein 254 isoform 1.)
genome : 81,839,026 - 81,852,303 (13,278)
query : 1 - 1,953 (1,953/2,105)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR028110 : Protein of unknown function DUF4499
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, mito 4, pero 3, E.R._mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008976)
HIX0008976
HIT000572135 (
ENST00000467529
)
(Transmembrane protein 254 isoform 1.)
genome : 81,839,026 - 81,852,313 (13,288)
query : 1 - 1,963 (1,963/1,963)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 20, mito 4, pero 3, E.R._mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008976)
HIX0008976
HIT000567840 (
ENST00000463029
)
(Transmembrane protein 254 isoform 7.)
genome : 81,839,029 - 81,851,105 (12,077)
query : 1 - 847 (847/847)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 11, cyto 9, cyto_nucl 7.5, mito 5, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008976)
HIX0008976
HIT000430429
(
AK311563
)
(Transmembrane protein 254 isoform 2.)
genome : 81,839,036 - 81,851,270 (12,235)
query : 1 - 1,013 (1,013/1,013)
5 exons
identity = 0.997
5'(1.000;0.990;0.981;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR028110 : Protein of unknown function DUF4499
SOSUI :
MEMBRANE PROTEIN
PSORT :
mito 16.5, cyto_mito 9.5, nucl 7, E.R. 3, plas 2,
golg 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008976)
HIX0008976
HIT000429026
(
AK310160
)
(Transmembrane protein 254 isoform 2.)
genome : 81,839,036 - 81,851,207 (12,172)
query : 1 - 942 (942/942)
5 exons
identity = 0.999
5'(1.000;1.000;0.990;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR028110 : Protein of unknown function DUF4499
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 17, cyto 11, mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008976)
HIX0008976
HIT000054587
(
BX537803
)
(Transmembrane protein 254 isoform 7.)
genome : 81,839,037 - 81,852,307 (13,271)
query : 1 - 2,042 (2,042/2,061)
5 exons
identity = 0.999
5'(1.000;0.990;1.000;1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 18, nucl 4.5, extr 4, cyto_nucl 4, cyto 2.5,
extr_plas 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008976)
HIX0008976
HIT000587606 (
ENST00000483732
)
(Transmembrane protein 254 isoform 7.)
genome : 81,839,084 - 81,850,806 (11,723)
query : 1 - 878 (878/878)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 15, nucl 6.5, cyto_nucl 6, cyto 4.5, mito 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008976)
HIX0008976
HIT000568013 (
ENST00000463209
)
(Transmembrane protein 254 isoform 7.)
genome : 81,841,459 - 81,846,197 (4,739)
query : 1 - 407 (407/407)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 12, cyto_nucl 8.5, extr_plas 8.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008976)
HIX0008976
HIT000548113 (
ENST00000450179
)
(Transmembrane protein 254 isoform 2.)
genome : 81,841,585 - 81,851,088 (9,504)
query : 8 - 719 (712/719)
3 exons
identity = 0.993
5'(0.957;1.000;1.000)3'
coverage = 0.990
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 13, extr 10, mito_pero 3.5, plas 3, pero 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008976)
HIX0008976
HIT000580383 (
ENST00000476173
)
(Transmembrane protein 254 isoform 1.)
genome : 81,841,593 - 81,851,108 (9,516)
query : 10 - 785 (776/785)
4 exons
identity = 0.999
5'(0.991;1.000;1.000;1.000)3'
coverage = 0.989
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 23, cyto 5.5, cyto_nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008976)
HIX0079203
HIT000071412
(
AF147339
)
Representative transcript
(Hypothetical short protein.)
genome : 81,851,167 - 81,851,623 (457)
query : 10 - 466 (457/466)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0079203)
HIX0008976
HIT000393372
(
DQ786319
)
(Hypothetical short protein.)
genome : 81,851,780 - 81,852,307 (528)
query : 18 - 544 (527/571)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 0.969
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 19.5, cyto_nucl 11.5, extr 7, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008976)
HIX0190588
HIT000515131 (
ENST00000417197
)
(Ribosomal protein L22e family protein.)
genome : 81,885,697 - 81,886,073 (377)
query : 1 - 377 (377/377)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 12, cyto_nucl 11.5, extr 10, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0190588)
HIX0035407
HIT000353550 (
ENST00000372270
)
(Placenta-specific protein 9 precursor.)
genome : 81,891,477 - 81,904,820 (13,344)
query : 1 - 495 (495/495)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 14, nucl 13, cyto 11, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035407)
HIX0035407
HIT000262239
(
BC066348
)
Representative transcript
(Placenta-specific protein 9 precursor.)
genome : 81,892,258 - 81,904,784 (12,527)
query : 1 - 673 (673/691)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.996
InterPro :
IPR027941 : Placenta-specific protein 9
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035407)
Ortholog candidate ( ->
Evola
)
Bos
sp. (Cow) : BC110016
Rattus
sp. (Rat) : XM_001056849
Macaca
sp. (Macaque) : XM_001088214
HIX0035407
HIT000334284
(
BC090922
)
(Placenta-specific protein 9 precursor.)
genome : 81,892,258 - 81,904,784 (12,527)
query : 1 - 673 (673/691)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.996
InterPro :
IPR027941 : Placenta-specific protein 9
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035407)
HIX0035407
HIT000365200 (
NM_001012973
)
(Placenta-specific protein 9 precursor.)
genome : 81,892,258 - 81,904,784 (12,527)
query : 1 - 673 (673/691)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.996
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035407)
HIX0035407
HIT000353547 (
ENST00000372267
)
(Placenta-specific protein 9 precursor.)
genome : 81,892,347 - 81,904,793 (12,447)
query : 1 - 472 (472/472)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035407)
HIX0035407
HIT000387622
(
BC117332
)
(Placenta-specific protein 9 precursor.)
genome : 81,892,430 - 81,904,745 (12,316)
query : 1 - 462 (462/462)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR027941 : Placenta-specific protein 9
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035407)
HIX0035407
HIT000387624
(
BC117334
)
(Placenta-specific protein 9 precursor.)
genome : 81,892,430 - 81,904,745 (12,316)
query : 1 - 462 (462/462)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR027941 : Placenta-specific protein 9
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035407)
HIX0035407
HIT000353543 (
ENST00000372263
)
(Placenta-specific protein 9 precursor.)
genome : 81,892,477 - 81,905,115 (12,639)
query : 1 - 785 (785/785)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 29
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035407)
HIX0035407
HIT000570349 (
ENST00000465660
)
(Conserved hypothetical protein.)
genome : 81,903,804 - 81,904,786 (983)
query : 1 - 427 (427/427)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 21.5, cyto_nucl 16, cyto 7.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035407)
HIX0008977
HIT000353511 (
ENST00000372231
)
(Annexin A11; 56 kDa autoantigen; Annexin XI; Annexin-11; Calcyclin-associated annexin 50; CAP-50;)
genome : 81,910,645 - 81,965,328 (54,684)
query : 1 - 6,720 (6,720/6,720)
15 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.917;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11, nucl 8.5, extr 4, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008977)
HIX0008977
HIT000536265 (
ENST00000438331
)
(Annexin A11; 56 kDa autoantigen; Annexin XI; Annexin-11; Calcyclin-associated annexin 50; CAP-50;)
genome : 81,910,645 - 81,965,328 (54,684)
query : 1 - 6,965 (6,965/6,965)
17 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.917;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11, nucl 8.5, extr 4, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008977)
HIX0008977
HIT000250418
(
AL357617
)
(Non-protein coding transcript.)
genome : 81,914,896 - 81,915,153 (258)
query : 1 - 258 (258/303)
1 exon
identity = 0.996
3'(0.996)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008977)
HIX0008977
HIT000198158 (
NM_001157
)
(Annexin A11; 56 kDa autoantigen; Annexin XI; Annexin-11; Calcyclin-associated annexin 50; CAP-50;)
genome : 81,914,880 - 81,965,328 (50,449)
query : 1 - 2,485 (2,485/2,486)
15 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.917;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11, nucl 8.5, extr 4, E.R. 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008977)
HIX0008977
HIT000213342 (
NM_145868
)
(Annexin A11; 56 kDa autoantigen; Annexin XI; Annexin-11; Calcyclin-associated annexin 50; CAP-50;)
genome : 81,914,880 - 81,965,328 (50,449)
query : 1 - 2,534 (2,534/2,535)
16 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.917;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11, nucl 8.5, extr 4, E.R. 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008977)
HIX0008977
HIT000213343 (
NM_145869
)
(Annexin A11; 56 kDa autoantigen; Annexin XI; Annexin-11; Calcyclin-associated annexin 50; CAP-50;)
genome : 81,914,880 - 81,965,328 (50,449)
query : 1 - 2,730 (2,730/2,731)
17 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.917;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11, nucl 8.5, extr 4, E.R. 3
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008977)
HIX0008977
HIT000246437
(
AJ278463
)
(Annexin A11; 56 kDa autoantigen; Annexin XI; Annexin-11; Calcyclin-associated annexin 50; CAP-50;)
genome : 81,914,880 - 81,965,328 (50,449)
query : 1 - 2,484 (2,484/2,485)
15 exons
identity = 0.996
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.917;1.000;1.000;1.000;1.000;
0.996)5'
coverage = 1.000
InterPro :
IPR001464 : Annexin
IPR008157 : Annexin, type XI
IPR018252 : Annexin repeat, conserved site
IPR018502 : Annexin repeat
GO :
0005509 : Molecular Function : calcium ion binding
0005544 : Molecular Function : calcium-dependent phospholipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11, nucl 8.5, extr 4, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008977)
HIX0008977
HIT000246438
(
AJ278464
)
(Annexin A11; 56 kDa autoantigen; Annexin XI; Annexin-11; Calcyclin-associated annexin 50; CAP-50;)
genome : 81,914,880 - 81,965,328 (50,449)
query : 1 - 2,533 (2,533/2,534)
16 exons
identity = 0.996
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.917;1.000;1.000;1.000;1.000;
1.000;0.996)5'
coverage = 1.000
InterPro :
IPR001464 : Annexin
IPR008157 : Annexin, type XI
IPR018252 : Annexin repeat, conserved site
IPR018502 : Annexin repeat
GO :
0005509 : Molecular Function : calcium ion binding
0005544 : Molecular Function : calcium-dependent phospholipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11, nucl 8.5, extr 4, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008977)
HIX0008977
HIT000246439
(
AJ278465
)
Representative transcript
(Annexin A11; 56 kDa autoantigen; Annexin XI; Annexin-11; Calcyclin-associated annexin 50; CAP-50;)
genome : 81,914,880 - 81,965,328 (50,449)
query : 1 - 2,729 (2,729/2,730)
17 exons
identity = 0.996
3'(0.999;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.917;1.000;1.000;1.000;1.000;
1.000;1.000;0.996)5'
coverage = 1.000
InterPro :
IPR001464 : Annexin
IPR008157 : Annexin, type XI
IPR018252 : Annexin repeat, conserved site
IPR018502 : Annexin repeat
GO :
0005509 : Molecular Function : calcium ion binding
0005544 : Molecular Function : calcium-dependent phospholipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11, nucl 8.5, extr 4, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008977)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB170308
Gallus
sp. (Chicken) : AJ719768
Danio
sp. (Zebrafish) : AY178802
Rattus
sp. (Rat) : BC083812
Bos
sp. (Cow) : BC119826
Monodelphis
sp. (Opossum) : ENSMODT00000001390
Oryzias
sp. (Medaka) : ENSORLT00000008377
Pongo
sp. (Orangutan) : ENSPPYT00000002756
Pan
sp. (Chimpanzee) : ENSPTRT00000005056
Tetraodon
sp. (Tetraodon) : GSTENT00016422001
Tetraodon
sp. (Tetraodon) : GSTENT00024657001
Mus
sp. (Mouse) : U65986
Equus
sp. (Horse) : XM_001504023
Canis
sp. (Dog) : XM_536401
Oryzias
sp. (Medaka) : Y11255
HIX0008977
HIT000109719 (
ENST00000265447
)
(Annexin A11; 56 kDa autoantigen; Annexin XI; Annexin-11; Calcyclin-associated annexin 50; CAP-50;)
genome : 81,914,880 - 81,965,328 (50,449)
query : 1 - 2,534 (2,534/2,534)
15 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.917;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11, nucl 8.5, extr 4, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008977)
HIX0008977
HIT000313974 (
ENST00000360615
)
(Annexin A11; 56 kDa autoantigen; Annexin XI; Annexin-11; Calcyclin-associated annexin 50; CAP-50;)
genome : 81,914,880 - 81,965,328 (50,449)
query : 1 - 2,729 (2,729/2,729)
16 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.917;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11, nucl 8.5, extr 4, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008977)
HIX0008977
HIT000520916 (
ENST00000422982
)
(Annexin A11; 56 kDa autoantigen; Annexin XI; Annexin-11; Calcyclin-associated annexin 50; CAP-50;)
genome : 81,914,880 - 81,965,328 (50,449)
query : 1 - 2,534 (2,534/2,534)
16 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.917;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11, nucl 8.5, extr 4, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008977)
HIX0008977
HIT000003042
(
AK000567
)
(Annexin A11; 56 kDa autoantigen; Annexin XI; Annexin-11; Calcyclin-associated annexin 50; CAP-50;)
genome : 81,915,345 - 81,965,328 (49,984)
query : 1 - 2,019 (2,019/2,051)
15 exons
identity = 0.994
3'(1.000;1.000;0.983;1.000;1.000;1.000;1.000;
1.000;1.000;0.907;1.000;1.000;1.000;1.000;
0.996)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11, nucl 8.5, extr 4, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008977)
HIX0008977
HIT000330698
(
AK222918
)
(Annexin A11; 56 kDa autoantigen; Annexin XI; Annexin-11; Calcyclin-associated annexin 50; CAP-50;)
genome : 81,915,345 - 81,965,291 (49,947)
query : 1 - 1,982 (1,982/1,998)
15 exons
identity = 0.994
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.907;1.000;1.000;1.000;1.000;
0.995)5'
coverage = 1.000
InterPro :
IPR001464 : Annexin
IPR008157 : Annexin, type XI
IPR018252 : Annexin repeat, conserved site
IPR018502 : Annexin repeat
GO :
0005509 : Molecular Function : calcium ion binding
0005544 : Molecular Function : calcium-dependent phospholipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11, nucl 8.5, extr 4, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008977)
HIX0008977
HIT000033303
(
BC007564
)
(Annexin A11; 56 kDa autoantigen; Annexin XI; Annexin-11; Calcyclin-associated annexin 50; CAP-50;)
genome : 81,915,353 - 81,935,914 (20,562)
query : 14 - 1,847 (1,834/1,864)
15 exons
identity = 0.995
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.917;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.993
InterPro :
IPR001464 : Annexin
IPR008157 : Annexin, type XI
IPR018252 : Annexin repeat, conserved site
IPR018502 : Annexin repeat
GO :
0005509 : Molecular Function : calcium ion binding
0005544 : Molecular Function : calcium-dependent phospholipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11, nucl 8.5, extr 4, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008977)
HIX0008977
HIT000012721
(
AK056107
)
(Annexin A11; 56 kDa autoantigen; Annexin XI; Annexin-11; Calcyclin-associated annexin 50; CAP-50;)
genome : 81,915,340 - 81,965,433 (50,094)
query : 1 - 2,004 (2,004/2,004)
17 exons
identity = 0.995
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.917;1.000;1.000;1.000;1.000;
1.000;0.990;1.000)5'
coverage = 1.000
InterPro :
IPR001464 : Annexin
IPR008157 : Annexin, type XI
IPR018252 : Annexin repeat, conserved site
IPR018502 : Annexin repeat
GO :
0005509 : Molecular Function : calcium ion binding
0005544 : Molecular Function : calcium-dependent phospholipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11, nucl 8.5, extr 4, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008977)
HIX0008977
HIT000568138 (
ENST00000463340
)
(Annexin A4; 35-beta calcimedin; Annexin IV; Annexin-4; Chromobindin-4; Endonexin I; Lipocortin IV; P32.5; PP4-X; Placental anticoagulant protein II; PAP-II; Protein II;)
genome : 81,915,344 - 81,917,774 (2,431)
query : 1 - 377 (377/377)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008977)
HIX0008977
HIT000192354
(
L19605
)
(Annexin A11; 56 kDa autoantigen; Annexin XI; Annexin-11; Calcyclin-associated annexin 50; CAP-50;)
genome : 81,915,353 - 81,965,269 (49,917)
query : 1 - 1,952 (1,952/1,958)
15 exons
identity = 0.995
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.917;1.000;1.000;1.000;1.000;
0.994)5'
coverage = 0.997
InterPro :
IPR001464 : Annexin
IPR008157 : Annexin, type XI
IPR018252 : Annexin repeat, conserved site
IPR018502 : Annexin repeat
GO :
0005509 : Molecular Function : calcium ion binding
0005544 : Molecular Function : calcium-dependent phospholipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11, nucl 8.5, extr 4, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008977)
HIX0008977
HIT000046160
(
AK126287
)
(Annexin A11; 56 kDa autoantigen; Annexin XI; Annexin-11; Calcyclin-associated annexin 50; CAP-50;)
genome : 81,915,350 - 81,964,247 (48,898)
query : 1 - 2,602 (2,602/2,602)
17 exons
identity = 0.995
3'(1.000;1.000;0.983;1.000;1.000;1.000;1.000;
1.000;1.000;0.917;0.989;1.000;1.000;1.000;
1.000;0.996;0.996)5'
coverage = 1.000
InterPro :
IPR001464 : Annexin
IPR008157 : Annexin, type XI
IPR018252 : Annexin repeat, conserved site
IPR018502 : Annexin repeat
GO :
0005509 : Molecular Function : calcium ion binding
0005544 : Molecular Function : calcium-dependent phospholipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11, nucl 8.5, extr 4, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008977)
HIX0008977
HIT000635044 (
ENST00000535999
)
(Annexin A11; 56 kDa autoantigen; Annexin XI; Annexin-11; Calcyclin-associated annexin 50; CAP-50;)
genome : 81,915,350 - 81,964,247 (48,898)
query : 1 - 2,602 (2,602/2,602)
17 exons
identity = 0.997
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.917;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11, nucl 8.5, extr 4, E.R. 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008977)
HIX0008977
HIT000495133
(
AK300509
)
(Annexin A11; 56 kDa autoantigen; Annexin XI; Annexin-11; Calcyclin-associated annexin 50; CAP-50;)
genome : 81,915,350 - 81,931,076 (15,727)
query : 1 - 2,127 (2,127/2,127)
13 exons
identity = 0.994
3'(1.000;1.000;1.000;0.990;1.000;1.000;1.000;
1.000;1.000;0.907;1.000;1.000;0.998)5'
coverage = 1.000
InterPro :
IPR001464 : Annexin
IPR008157 : Annexin, type XI
IPR018252 : Annexin repeat, conserved site
IPR018502 : Annexin repeat
GO :
0005509 : Molecular Function : calcium ion binding
0005544 : Molecular Function : calcium-dependent phospholipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13.5, cyto_nucl 13.5, extr 8, cyto 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008977)
HIX0008977
HIT000329705
(
AB209770
)
(Annexin A11; 56 kDa autoantigen; Annexin XI; Annexin-11; Calcyclin-associated annexin 50; CAP-50;)
genome : 81,915,354 - 81,965,273 (49,920)
query : 1 - 2,005 (2,005/2,005)
16 exons
identity = 0.995
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.907;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001464 : Annexin
IPR008157 : Annexin, type XI
IPR018252 : Annexin repeat, conserved site
IPR018502 : Annexin repeat
GO :
0005509 : Molecular Function : calcium ion binding
0005544 : Molecular Function : calcium-dependent phospholipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 13.5, nucl 10, cyto_golg 7.5, extr 4, pero 2,
extr_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008977)
HIX0008977
HIT000545423 (
ENST00000447489
)
(Annexin A11; 56 kDa autoantigen; Annexin XI; Annexin-11; Calcyclin-associated annexin 50; CAP-50;)
genome : 81,915,396 - 81,921,768 (6,373)
query : 1 - 750 (750/750)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 14, extr 13, nucl 2, mito 2, mito_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008977)
HIX0008977
HIT000495671
(
AK301047
)
(Annexin A11; 56 kDa autoantigen; Annexin XI; Annexin-11; Calcyclin-associated annexin 50; CAP-50;)
genome : 81,915,514 - 81,965,314 (49,801)
query : 1 - 2,154 (2,154/2,154)
17 exons
identity = 0.995
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.917;1.000;1.000;1.000;0.996;
1.000;1.000;0.995)5'
coverage = 1.000
InterPro :
IPR001464 : Annexin
IPR008157 : Annexin, type XI
IPR018252 : Annexin repeat, conserved site
IPR018502 : Annexin repeat
GO :
0005509 : Molecular Function : calcium ion binding
0005544 : Molecular Function : calcium-dependent phospholipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 12.5, nucl 6.5, mito 3, extr 2,
cysk 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008977)
HIX0008977
HIT000636147 (
ENST00000537102
)
(Annexin A11; 56 kDa autoantigen; Annexin XI; Annexin-11; Calcyclin-associated annexin 50; CAP-50;)
genome : 81,915,514 - 81,965,314 (49,801)
query : 1 - 2,155 (2,155/2,155)
17 exons
identity = 0.996
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.917;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 12.5, nucl 6.5, mito 3, extr 2,
cysk 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008977)
HIX0008977
HIT000492986
(
AK298362
)
(Annexin A4; 35-beta calcimedin; Annexin IV; Annexin-4; Carbohydrate-binding protein p33/p41; Chromobindin-4; Endonexin I; Lipocortin IV; P32.5; PP4-X; Placental anticoagulant protein II; PAP-II; Protein II;)
genome : 81,915,528 - 81,965,288 (49,761)
query : 1 - 1,647 (1,647/1,647)
16 exons
identity = 0.988
3'(1.000;1.000;1.000;1.000;1.000;0.982;1.000;
1.000;1.000;0.917;1.000;1.000;0.925;1.000;
1.000;0.995)5'
coverage = 1.000
InterPro :
IPR001464 : Annexin
IPR008157 : Annexin, type XI
IPR018252 : Annexin repeat, conserved site
IPR018502 : Annexin repeat
GO :
0005509 : Molecular Function : calcium ion binding
0005544 : Molecular Function : calcium-dependent phospholipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, cyto_mito 12.6667, mito_pero 10.8333,
nucl 7.5, cyto_nucl 6.33333
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008977)
HIX0008977
HIT000266736
(
BT019934
)
(Annexin A11; 56 kDa autoantigen; Annexin XI; Annexin-11; Calcyclin-associated annexin 50; CAP-50;)
genome : 81,915,611 - 81,932,617 (17,007)
query : 1 - 1,516 (1,516/1,518)
14 exons
identity = 0.993
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.907;1.000;1.000;1.000;1.000)5'
coverage = 0.999
InterPro :
IPR001464 : Annexin
IPR008157 : Annexin, type XI
IPR018252 : Annexin repeat, conserved site
IPR018502 : Annexin repeat
GO :
0005509 : Molecular Function : calcium ion binding
0005544 : Molecular Function : calcium-dependent phospholipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11, nucl 8.5, extr 4, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008977)
HIX0008977
HIT000267232
(
CR450323
)
(Annexin A11; 56 kDa autoantigen; Annexin XI; Annexin-11; Calcyclin-associated annexin 50; CAP-50;)
genome : 81,915,612 - 81,932,617 (17,006)
query : 1 - 1,515 (1,515/1,515)
14 exons
identity = 0.993
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;0.907;1.000;1.000;1.000;1.000)5'
coverage = 1.000
InterPro :
IPR001464 : Annexin
IPR008157 : Annexin, type XI
IPR018252 : Annexin repeat, conserved site
IPR018502 : Annexin repeat
GO :
0005509 : Molecular Function : calcium ion binding
0005544 : Molecular Function : calcium-dependent phospholipid binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 12.5, cyto_nucl 11, nucl 8.5, extr 4, E.R. 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008977)
HIX0008977
HIT000585767 (
ENST00000481805
)
(Annexin A11; 56 kDa autoantigen; Annexin XI; Annexin-11; Calcyclin-associated annexin 50; CAP-50;)
genome : 81,926,155 - 81,928,843 (2,689)
query : 1 - 793 (793/793)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 13.5, nucl 12, extr 11, cyto 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008977)
HIX0008977
HIT000535733 (
ENST00000437799
)
(Annexin A11; 56 kDa autoantigen; Annexin XI; Annexin-11; Calcyclin-associated annexin 50; CAP-50;)
genome : 81,928,836 - 81,932,777 (3,942)
query : 1 - 610 (610/610)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 22, cyto 8, cyto_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008977)
HIX0008977
HIT000568443 (
ENST00000463657
)
(Activating molecule in BECN1-regulated autophagy protein 1 isoform 1.)
genome : 81,932,590 - 81,965,278 (32,689)
query : 1 - 780 (780/780)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008977)
HIX0008977
HIT000578829 (
ENST00000474545
)
(FAM138 family protein.)
genome : 81,940,858 - 81,964,675 (23,818)
query : 1 - 550 (550/550)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 28, lyso 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008977)
HIX0035367
HIT000098936
(
BC048265
)
Representative transcript
(Hypothetical short protein.)
genome : 81,967,466 - 81,979,413 (11,948)
query : 7 - 2,167 (2,161/2,181)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto_nucl 7.5, nucl 5, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035367)
HIX0035367
HIT000660395 (
NR_038464
)
(Hypothetical short protein.)
genome : 81,967,466 - 81,979,413 (11,948)
query : 1 - 2,161 (2,161/2,171)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto_nucl 7.5, nucl 5, cyto 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035367)
HIX0035367
HIT000520781 (
ENST00000422847
)
(Hypothetical short protein.)
genome : 81,967,466 - 81,979,413 (11,948)
query : 1 - 2,161 (2,161/2,161)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto_nucl 7.5, nucl 5, cyto 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035367)
HIX0035367
HIT000087339
(
BC009626
)
(Hypothetical short protein.)
genome : 81,967,841 - 81,979,413 (11,573)
query : 1 - 1,786 (1,786/1,823)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 20, cyto_nucl 7.5, nucl 5, cyto 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035367)
HIX0035367
HIT000530242 (
ENST00000432308
)
(Hypothetical short protein.)
genome : 81,967,965 - 81,978,370 (10,406)
query : 1 - 629 (629/629)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035367)
HIX0170984
HIT000537662 (
ENST00000439728
)
(Ribosomal protein S12e family protein.)
genome : 81,975,607 - 81,975,875 (269)
query : 1 - 269 (269/269)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170984)
HIX0201565
HIT000521116 (
ENST00000423182
)
(AMP-binding enzyme C-terminal domain containing protein.)
genome : 81,993,420 - 82,005,123 (11,704)
query : 1 - 635 (635/635)
5 exons
identity = 0.977
5'(1.000;1.000;0.957;0.939;0.985)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, nucl 12, mito 6, cyto_nucl 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201565)
HIX0190545
HIT000130096_02 (
ENST00000336452
)
(Translation elongation factor IF5A family protein.)
genome : 82,006,332 - 82,007,460 (1,129)
query : 118 - 1,248 (1,131/1,248)
1 exon
identity = 0.980
3'(0.980)5'
coverage = 0.906
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 10, mito 9, cyto_nucl 9, extr 7, nucl 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0190545)
HIX0190545
HIT000539140 (
ENST00000441206
)
(Translation elongation factor IF5A family protein.)
genome : 82,006,975 - 82,007,439 (465)
query : 1 - 465 (465/465)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 11.5, cysk 8, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0190545)
HIX0190545
HIT000453517_04
(
DQ586986
)
Representative transcript
(Non-protein coding transcript.)
genome : 82,007,024 - 82,007,053 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0190545)
HIX0190545
HIT000460419_04
(
DQ593888
)
(Non-protein coding transcript.)
genome : 82,007,027 - 82,007,056 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0190545)
HIX0170535
HIT000463130_06
(
DQ596599
)
Representative transcript
(Non-protein coding transcript.)
genome : 82,007,134 - 82,007,163 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170535)
HIX0170487
HIT000436479_05
(
DQ569948
)
Representative transcript
(Non-protein coding transcript.)
genome : 82,007,248 - 82,007,278 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170487)
HIX0170508
HIT000451124_05
(
DQ584593
)
Representative transcript
(Non-protein coding transcript.)
genome : 82,007,434 - 82,007,463 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170508)
HIX0170531
HIT000461604_08
(
DQ595073
)
Representative transcript
(Non-protein coding transcript.)
genome : 82,007,735 - 82,007,764 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170531)
HIX0201558
HIT000445805_05
(
DQ579274
)
Representative transcript
(Non-protein coding transcript.)
genome : 82,008,966 - 82,008,995 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201558)
HIX0025931
HIT000045697
(
AK125824
)
Representative transcript
(Conserved hypothetical protein.)
genome : 82,009,466 - 82,013,395 (3,930)
query : 1 - 3,930 (3,930/3,930)
1 exon
identity = 0.998
5'(0.998)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 13.1667, cyto 7.5, extr 6,
cyto_pero 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025931)
Ortholog candidate ( ->
Evola
)
Pan
sp. (Chimpanzee) : ENSPTRT00000057681
HIX0025931
HIT000310380 (
ENST00000356374
)
(Conserved hypothetical protein.)
genome : 82,009,466 - 82,013,395 (3,930)
query : 1 - 3,930 (3,930/3,930)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 15.5, cyto_nucl 13.1667, cyto 7.5, extr 6,
cyto_pero 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025931)
HIX0025931
HIT000048013
(
AK128140
)
(Conserved hypothetical protein.)
genome : 82,010,981 - 82,013,877 (2,897)
query : 1 - 2,897 (2,897/2,897)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 14.5, cyto_nucl 12.6667, cyto 7.5, extr 7,
cyto_pero 5.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025931)
HIX0025931
HIT000441149
(
DQ574618
)
(Non-protein coding transcript.)
genome : 82,012,939 - 82,012,969 (31)
query : 1 - 31 (31/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0025931)
HIX0170546
HIT000467941_05
(
DQ601410
)
Representative transcript
(Non-protein coding transcript.)
genome : 82,014,291 - 82,014,320 (30)
query : 1 - 30 (30/31)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 0.968
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170546)
HIX0021631
HIT000010205
(
AK026931
)
(S-adenosylmethionine synthase isoform type-1; AdoMet synthase 1; EC=2.5.1.6; Methionine adenosyltransferase 1; MAT 1; Methionine adenosyltransferase I/III; MAT-I/III;)
genome : 82,031,580 - 82,035,235 (3,656)
query : 1 - 2,657 (2,657/2,692)
3 exons
identity = 0.998
3'(0.999;1.000;0.994)5'
coverage = 1.000
EC number :
EC 2.5.1.6
KEGG pathway :
00270 : Cysteine and methionine metabolism (61)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR002133 : S-adenosylmethionine synthetase
IPR022630 : S-adenosylmethionine synthetase, C-terminal
IPR022631 : S-adenosylmethionine synthetase, conserved site
IPR022636 : S-adenosylmethionine synthetase superfamily
GO :
0004478 : Molecular Function : methionine adenosyltransferase activity
0005524 : Molecular Function : ATP binding
0006556 : Biological Process : S-adenosylmethionine biosynthetic process
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021631)
HIX0021631
HIT000197473 (
NM_000429
)
(S-adenosylmethionine synthase isoform type-1; AdoMet synthase 1; EC=2.5.1.6; Methionine adenosyltransferase 1; MAT 1; Methionine adenosyltransferase I/III; MAT-I/III;)
genome : 82,031,576 - 82,049,434 (17,859)
query : 1 - 3,404 (3,404/3,419)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.5.1.6
KEGG pathway :
00270 : Cysteine and methionine metabolism (61)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 13.5, nucl 4.5, cysk 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021631)
HIX0021631
HIT000038336
(
BC018359
)
Representative transcript
(S-adenosylmethionine synthase isoform type-1; AdoMet synthase 1; EC=2.5.1.6; Methionine adenosyltransferase 1; MAT 1; Methionine adenosyltransferase I/III; MAT-I/III;)
genome : 82,031,576 - 82,049,395 (17,820)
query : 1 - 3,371 (3,371/3,386)
9 exons
identity = 0.996
3'(0.999;1.000;0.984;1.000;0.993;1.000;1.000;
1.000;0.981)5'
coverage = 1.000
EC number :
EC 2.5.1.6
KEGG pathway :
00270 : Cysteine and methionine metabolism (61)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR002133 : S-adenosylmethionine synthetase
IPR022628 : S-adenosylmethionine synthetase, N-terminal
IPR022629 : S-adenosylmethionine synthetase, central domain
IPR022630 : S-adenosylmethionine synthetase, C-terminal
IPR022631 : S-adenosylmethionine synthetase, conserved site
IPR022636 : S-adenosylmethionine synthetase superfamily
GO :
0004478 : Molecular Function : methionine adenosyltransferase activity
0005524 : Molecular Function : ATP binding
0006556 : Biological Process : S-adenosylmethionine biosynthetic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 13.5, nucl 4.5, cysk 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021631)
Ortholog candidate ( ->
Evola
)
Danio
sp. (Zebrafish) : BC045343
Rattus
sp. (Rat) : BC089770
Bos
sp. (Cow) : BC105410
Gallus
sp. (Chicken) : BX935026
Tetraodon
sp. (Tetraodon) : CR678417
Equus
sp. (Horse) : ENSECAT00000018568
Oryzias
sp. (Medaka) : ENSORLT00000009258
Oryzias
sp. (Medaka) : ENSORLT00000016106
Pongo
sp. (Orangutan) : ENSPPYT00000002755
Tetraodon
sp. (Tetraodon) : GSTENT00022288001
Mus
sp. (Mouse) : L13622
Takifugu
sp. (Fugu) : SINFRUT00000165342
Macaca
sp. (Macaque) : XM_001087977
Monodelphis
sp. (Opossum) : XM_001365213
Pan
sp. (Chimpanzee) : XM_507874
Canis
sp. (Dog) : XM_846840
HIX0021631
HIT000322954
(
X69078
)
(S-adenosylmethionine synthase isoform type-1; AdoMet synthase 1; EC=2.5.1.6; Methionine adenosyltransferase 1; MAT 1; Methionine adenosyltransferase I/III; MAT-I/III;)
genome : 82,031,576 - 82,049,250 (17,675)
query : 1 - 3,218 (3,218/3,228)
9 exons
identity = 0.998
3'(0.998;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.988)5'
coverage = 1.000
EC number :
EC 2.5.1.6
KEGG pathway :
00270 : Cysteine and methionine metabolism (61)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR002133 : S-adenosylmethionine synthetase
IPR022628 : S-adenosylmethionine synthetase, N-terminal
IPR022629 : S-adenosylmethionine synthetase, central domain
IPR022630 : S-adenosylmethionine synthetase, C-terminal
IPR022631 : S-adenosylmethionine synthetase, conserved site
IPR022636 : S-adenosylmethionine synthetase superfamily
GO :
0004478 : Molecular Function : methionine adenosyltransferase activity
0005524 : Molecular Function : ATP binding
0006556 : Biological Process : S-adenosylmethionine biosynthetic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 13.5, nucl 4.5, cysk 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021631)
HIX0021631
HIT000353493 (
ENST00000372213
)
(S-adenosylmethionine synthase isoform type-1; AdoMet synthase 1; EC=2.5.1.6; Methionine adenosyltransferase 1; MAT 1; Methionine adenosyltransferase I/III; MAT-I/III;)
genome : 82,031,576 - 82,049,440 (17,865)
query : 1 - 3,410 (3,410/3,410)
9 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.5.1.6
KEGG pathway :
00270 : Cysteine and methionine metabolism (61)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 13.5, nucl 4.5, cysk 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021631)
HIX0021631
HIT000589085 (
ENST00000485270
)
(S-adenosylmethionine synthase isoform type-1; AdoMet synthase 1; EC=2.5.1.6; Methionine adenosyltransferase 1; MAT 1; Methionine adenosyltransferase I/III; MAT-I/III;)
genome : 82,031,576 - 82,035,235 (3,660)
query : 1 - 2,661 (2,661/2,661)
3 exons
identity = 1.000
3'(1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.5.1.6
KEGG pathway :
00270 : Cysteine and methionine metabolism (61)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 24, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021631)
HIX0021631
HIT000584839 (
ENST00000480845
)
(S-adenosylmethionine synthase isoform type-1; AdoMet synthase 1; EC=2.5.1.6; Methionine adenosyltransferase 1; MAT 1; Methionine adenosyltransferase I/III; MAT-I/III;)
genome : 82,031,814 - 82,034,955 (3,142)
query : 1 - 790 (790/790)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.5.1.6
KEGG pathway :
00270 : Cysteine and methionine metabolism (61)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 28, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021631)
HIX0021631
HIT000441670
(
DQ575139
)
(Non-protein coding transcript.)
genome : 82,032,585 - 82,032,614 (30)
query : 1 - 30 (30/30)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021631)
HIX0021631
HIT000423617
(
AK290820
)
(S-adenosylmethionine synthase isoform type-1; AdoMet synthase 1; EC=2.5.1.6; Methionine adenosyltransferase 1; MAT 1; Methionine adenosyltransferase I/III; MAT-I/III;)
genome : 82,033,214 - 82,049,293 (16,080)
query : 1 - 1,632 (1,632/1,661)
9 exons
identity = 0.991
3'(0.995;1.000;0.989;0.995;0.986;1.000;1.000;
1.000;0.967)5'
coverage = 0.983
EC number :
EC 2.5.1.6
KEGG pathway :
00270 : Cysteine and methionine metabolism (61)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR002133 : S-adenosylmethionine synthetase
IPR022628 : S-adenosylmethionine synthetase, N-terminal
IPR022629 : S-adenosylmethionine synthetase, central domain
IPR022630 : S-adenosylmethionine synthetase, C-terminal
IPR022631 : S-adenosylmethionine synthetase, conserved site
IPR022636 : S-adenosylmethionine synthetase superfamily
GO :
0004478 : Molecular Function : methionine adenosyltransferase activity
0005524 : Molecular Function : ATP binding
0006556 : Biological Process : S-adenosylmethionine biosynthetic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19, cyto_nucl 12.5, nucl 4, cysk 4, extr 2,
mito 2, cysk_plas 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021631)
HIX0021631
HIT000101507
(
D49357
)
(S-adenosylmethionine synthase isoform type-1; AdoMet synthase 1; EC=2.5.1.6; Methionine adenosyltransferase 1; MAT 1; Methionine adenosyltransferase I/III; MAT-I/III;)
genome : 82,033,256 - 82,049,197 (15,942)
query : 1 - 1,487 (1,487/1,487)
9 exons
identity = 0.995
3'(0.992;1.000;0.978;1.000;0.993;1.000;1.000;
1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.5.1.6
KEGG pathway :
00270 : Cysteine and methionine metabolism (61)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
InterPro :
IPR002133 : S-adenosylmethionine synthetase
IPR022628 : S-adenosylmethionine synthetase, N-terminal
IPR022629 : S-adenosylmethionine synthetase, central domain
IPR022630 : S-adenosylmethionine synthetase, C-terminal
IPR022631 : S-adenosylmethionine synthetase, conserved site
IPR022636 : S-adenosylmethionine synthetase superfamily
GO :
0004478 : Molecular Function : methionine adenosyltransferase activity
0005524 : Molecular Function : ATP binding
0006556 : Biological Process : S-adenosylmethionine biosynthetic process
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 19.5, cyto_nucl 13.5, nucl 4.5, cysk 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021631)
HIX0021631
HIT000552935 (
ENST00000455001
)
(S-adenosylmethionine synthase isoform type-1; AdoMet synthase 1; EC=2.5.1.6; Methionine adenosyltransferase 1; MAT 1; Methionine adenosyltransferase I/III; MAT-I/III;)
genome : 82,036,276 - 82,049,113 (12,838)
query : 1 - 435 (435/435)
5 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
EC number :
EC 2.5.1.6
KEGG pathway :
00270 : Cysteine and methionine metabolism (61)
01100 : Metabolic pathways (1346)
01110 : Biosynthesis of secondary metabolites (562)
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, extr 13, cyto_nucl 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0021631)
HIX0171118
HIT000546945 (
ENST00000449011
)
(Conserved hypothetical protein.)
genome : 82,057,476 - 82,059,411 (1,936)
query : 1 - 1,626 (1,626/1,626)
2 exons
identity = 0.998
5'(1.000;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 15
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171118)
HIX0170671
HIT000514591 (
ENST00000416657
)
(Hypothetical short protein.)
genome : 82,093,527 - 82,094,182 (656)
query : 1 - 339 (339/339)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, cyto 13
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170671)
HIX0020416
HIT000038576
(
BC019250
)
Representative transcript
(DPY30 domain-containing protein 1;)
genome : 82,095,863 - 82,116,500 (20,638)
query : 6 - 753 (748/795)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 0.993
InterPro :
IPR007858 : Dpy-30 motif
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16.5, nucl 10.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020416)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC049632
Bos
sp. (Cow) : BC109581
Gallus
sp. (Chicken) : BX950529
Canis
sp. (Dog) : ENSCAFT00000025123
Pongo
sp. (Orangutan) : ENSPPYT00000002753
Takifugu
sp. (Fugu) : SINFRUT00000138739
Rattus
sp. (Rat) : XM_001066918
Macaca
sp. (Macaque) : XM_001087736
Monodelphis
sp. (Opossum) : XM_001370403
Equus
sp. (Horse) : XM_001501456
Pan
sp. (Chimpanzee) : XM_507875
HIX0020416
HIT000212571 (
NM_138812
)
(DPY30 domain-containing protein 1;)
genome : 82,095,863 - 82,116,514 (20,652)
query : 1 - 762 (762/787)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16.5, nucl 10.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020416)
HIX0020416
HIT000724636 (
NM_001269053
)
(DPY30 domain-containing protein 1;)
genome : 82,095,863 - 82,116,514 (20,652)
query : 1 - 639 (639/664)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16.5, nucl 10.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020416)
HIX0020416
HIT000353484 (
ENST00000372204
)
(DPY30 domain-containing protein 1;)
genome : 82,095,861 - 82,116,500 (20,640)
query : 1 - 750 (750/750)
8 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16.5, nucl 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020416)
HIX0020416
HIT000045781
(
AK125908
)
(DPY30 domain-containing protein 1;)
genome : 82,095,864 - 82,116,511 (20,648)
query : 1 - 3,038 (3,038/3,038)
7 exons
identity = 0.999
3'(0.999;1.000;1.000;1.000;1.000;1.000;0.977)5'
coverage = 1.000
InterPro :
IPR007858 : Dpy-30 motif
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 14.5, extr 5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020416)
HIX0020416
HIT000353482 (
ENST00000372202
)
(DPY30 domain-containing protein 1;)
genome : 82,095,885 - 82,116,509 (20,625)
query : 1 - 612 (612/612)
7 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 17.5, cyto_nucl 16.5, nucl 10.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020416)
HIX0020416
HIT000425339
(
AK292542
)
(DPY30 domain-containing protein 1;)
genome : 82,097,970 - 82,116,511 (18,542)
query : 1 - 1,169 (1,169/1,169)
6 exons
identity = 0.999
3'(1.000;1.000;1.000;1.000;1.000;0.998)5'
coverage = 1.000
InterPro :
IPR007858 : Dpy-30 motif
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 14.5, extr 5, mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020416)
HIX0020416
HIT000519858 (
ENST00000421924
)
(DPY30 domain-containing protein 1;)
genome : 82,097,970 - 82,116,511 (18,542)
query : 1 - 1,169 (1,169/1,169)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 18.5, cyto_nucl 14.5, extr 5, mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020416)
HIX0020416
HIT000552296 (
ENST00000454362
)
(DPY30 domain-containing protein 1;)
genome : 82,098,269 - 82,116,470 (18,202)
query : 1 - 829 (829/829)
6 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 22.5, cyto_nucl 17, nucl 6.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020416)
HIX0008979
HIT000089640
(
BC018606
)
Representative transcript
(DPY30 domain-containing protein 2 isoform 1.)
genome : 82,104,501 - 82,127,829 (23,329)
query : 1 - 2,254 (2,254/2,270)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR007858 : Dpy-30 motif
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, mito 5, extr 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008979)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : AK016963
Bos
sp. (Cow) : BC146140
Gallus
sp. (Chicken) : BX950529
Canis
sp. (Dog) : ENSCAFT00000036524
Pongo
sp. (Orangutan) : ENSPPYT00000002752
Rattus
sp. (Rat) : XM_001066870
Monodelphis
sp. (Opossum) : XM_001370449
Equus
sp. (Horse) : XM_001917123
Pan
sp. (Chimpanzee) : XM_507876
Macaca
sp. (Macaque) : XR_011582
HIX0008979
HIT000724641 (
NM_001270042
)
(DPY30 domain-containing protein 2 isoform 2.)
genome : 82,104,501 - 82,127,829 (23,329)
query : 1 - 1,736 (1,736/1,752)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, extr 7, mito_pero 7, cyto_nucl 6.5, cyto 6,
E.R._mito 6
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008979)
HIX0008979
HIT000727363 (
NR_070308
)
(DPY30 domain-containing protein 2 isoform 1.)
genome : 82,104,501 - 82,127,829 (23,329)
query : 1 - 2,254 (2,254/2,270)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, mito 5, extr 2, pero 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008979)
HIX0008979
HIT000727364 (
NR_070309
)
(DPY30 domain-containing protein 2 isoform 1.)
genome : 82,104,501 - 82,127,829 (23,329)
query : 1 - 2,036 (2,036/2,052)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, mito 5, extr 2, pero 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008979)
HIX0008979
HIT000353478 (
ENST00000372198
)
(DPY30 domain-containing protein 2 isoform 1.)
genome : 82,104,501 - 82,127,829 (23,329)
query : 1 - 1,736 (1,736/1,736)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 12, extr 7, mito_pero 7, cyto_nucl 6.5, cyto 6,
E.R._mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008979)
HIX0008979
HIT000353479 (
ENST00000372199
)
(DPY30 domain-containing protein 2 isoform 1.)
genome : 82,104,501 - 82,127,829 (23,329)
query : 1 - 2,254 (2,254/2,254)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, mito 5, extr 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008979)
HIX0008979
HIT000353477 (
ENST00000372197
)
(DPY30 domain-containing protein 2 isoform 1.)
genome : 82,104,515 - 82,127,829 (23,315)
query : 1 - 2,022 (2,022/2,022)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, mito 5, extr 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008979)
HIX0008979
HIT000033180
(
BC007374
)
(DPY30 domain-containing protein 2 isoform 1.)
genome : 82,104,515 - 82,127,038 (22,524)
query : 1 - 1,231 (1,231/1,248)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR007858 : Dpy-30 motif
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, mito 5, extr 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008979)
HIX0020416
HIT000551411 (
ENST00000453477
)
(DPY30 domain-containing protein 1;)
genome : 82,111,666 - 82,116,511 (4,846)
query : 1 - 750 (750/750)
4 exons
identity = 1.000
3'(1.000;1.000;1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 24.5, cyto_nucl 16.5, nucl 5.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020416)
HIX0008979
HIT000542741 (
ENST00000444807
)
(DPY30 domain-containing protein 2 isoform 1.)
genome : 82,116,053 - 82,127,037 (10,985)
query : 1 - 1,173 (1,173/1,173)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, mito 5, extr 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008979)
HIX0008979
HIT000210600 (
NM_032372
)
(DPY30 domain-containing protein 2 isoform 1.)
genome : 82,116,524 - 82,127,829 (11,306)
query : 1 - 1,876 (1,876/1,892)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, mito 5, extr 2, pero 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008979)
HIX0008979
HIT000724640 (
NM_001270041
)
(DPY30 domain-containing protein 2 isoform 1.)
genome : 82,116,524 - 82,127,829 (11,306)
query : 1 - 1,723 (1,723/1,739)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 0.999
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, mito 5, extr 2, pero 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008979)
HIX0008979
HIT000509472 (
ENST00000411538
)
(DPY30 domain-containing protein 2 isoform 1.)
genome : 82,116,529 - 82,126,550 (10,022)
query : 1 - 439 (439/439)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 10, extr 9, nucl 3.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008979)
HIX0008979
HIT000018245
(
AK093378
)
(DPY30 domain-containing protein 2 isoform 1.)
genome : 82,116,558 - 82,127,829 (11,272)
query : 3 - 1,844 (1,842/1,844)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.999
InterPro :
IPR007858 : Dpy-30 motif
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, mito 5, extr 2, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008979)
HIX0008979
HIT000106884 (
ENST00000256039
)
(DPY30 domain-containing protein 2 isoform 1.)
genome : 82,116,558 - 82,127,829 (11,272)
query : 1 - 1,842 (1,842/1,842)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 23, mito 5, extr 2, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008979)
HIX0008980
HIT000723033 (
NM_001243779
)
(Redox-regulatory protein FAM213A; Peroxiredoxin-like 2 activated in M-CSF stimulated monocytes; Protein PAMM;)
genome : 82,167,585 - 82,192,753 (25,169)
query : 1 - 1,718 (1,718/1,743)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, E.R. 9, mito 3.5, cyto_mito 3.5, cyto 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008980)
HIX0008980
HIT000353468 (
ENST00000372188
)
(Redox-regulatory protein FAM213A; Peroxiredoxin-like 2 activated in M-CSF stimulated monocytes; Protein PAMM;)
genome : 82,167,585 - 82,191,864 (24,280)
query : 1 - 829 (829/829)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, E.R. 9, mito 3.5, cyto_mito 3.5, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008980)
HIX0008980
HIT000210564 (
NM_032333
)
(Redox-regulatory protein FAM213A; Peroxiredoxin-like 2 activated in M-CSF stimulated monocytes; Protein PAMM;)
genome : 82,168,242 - 82,192,753 (24,512)
query : 1 - 1,748 (1,748/1,773)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, E.R. 9, mito 3.5, cyto_mito 3.5, cyto 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008980)
HIX0008980
HIT000723034 (
NM_001243780
)
(Redox-regulatory protein FAM213A; Peroxiredoxin-like 2 activated in M-CSF stimulated monocytes; Protein PAMM;)
genome : 82,168,242 - 82,192,753 (24,512)
query : 1 - 2,214 (2,214/2,239)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, E.R. 9, mito 3.5, cyto_mito 3.5, cyto 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008980)
HIX0008980
HIT000723035 (
NM_001243781
)
(Redox-regulatory protein FAM213A isoform 2 precursor.)
genome : 82,168,242 - 82,192,753 (24,512)
query : 1 - 1,731 (1,731/1,756)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 15, extr 11, mito 2.5, cyto_mito 2.5, cyto 1.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008980)
HIX0008980
HIT000353467 (
ENST00000372187
)
(Redox-regulatory protein FAM213A; Peroxiredoxin-like 2 activated in M-CSF stimulated monocytes; Protein PAMM;)
genome : 82,168,249 - 82,192,753 (24,505)
query : 1 - 1,741 (1,741/1,741)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, E.R. 9, mito 3.5, cyto_mito 3.5, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008980)
HIX0008980
HIT000353465 (
ENST00000372185
)
(Redox-regulatory protein FAM213A isoform 2 precursor.)
genome : 82,168,250 - 82,192,753 (24,504)
query : 1 - 1,723 (1,723/1,723)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
E.R. 15, extr 11, mito 2.5, cyto_mito 2.5, cyto 1.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008980)
HIX0008980
HIT000082482
(
AK075447
)
(Redox-regulatory protein FAM213A isoform 3 precursor.)
genome : 82,168,250 - 82,192,391 (24,142)
query : 1 - 1,361 (1,361/1,361)
6 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.998)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 27, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008980)
HIX0008980
HIT000081678
(
AK074643
)
(Redox-regulatory protein FAM213A; Peroxiredoxin-like 2 activated in M-CSF stimulated monocytes; Protein PAMM;)
genome : 82,168,298 - 82,192,747 (24,450)
query : 2 - 1,690 (1,689/1,690)
6 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;1.000;0.994)3'
coverage = 0.999
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, E.R. 9, mito 3.5, cyto_mito 3.5, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008980)
HIX0008980
HIT000434306
(
AK315440
)
(Redox-regulatory protein FAM213A; Peroxiredoxin-like 2 activated in M-CSF stimulated monocytes; Protein PAMM;)
genome : 82,168,348 - 82,191,855 (23,508)
query : 1 - 744 (744/744)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, E.R. 9, mito 3.5, cyto_mito 3.5, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008980)
HIX0008980
HIT000253103
(
AY359059
)
Representative transcript
(Redox-regulatory protein FAM213A; Peroxiredoxin-like 2 activated in M-CSF stimulated monocytes; Protein PAMM;)
genome : 82,168,349 - 82,192,393 (24,045)
query : 1 - 1,281 (1,281/1,281)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, E.R. 9, mito 3.5, cyto_mito 3.5, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008980)
HIX0008980
HIT000723032 (
NM_001243778
)
(Redox-regulatory protein FAM213A; Peroxiredoxin-like 2 activated in M-CSF stimulated monocytes; Protein PAMM;)
genome : 82,173,575 - 82,192,753 (19,179)
query : 1 - 1,648 (1,648/1,673)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, E.R. 9, mito 3.5, cyto_mito 3.5, cyto 2.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008980)
HIX0008980
HIT000723036 (
NM_001243782
)
(Redox-regulatory protein FAM213A isoform 3 precursor.)
genome : 82,173,575 - 82,192,753 (19,179)
query : 1 - 1,631 (1,631/1,656)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
E.R. 15, extr 10, mito 3.5, cyto_mito 3, cyto 1.5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008980)
HIX0008980
HIT000046165
(
AK126292
)
(Conserved hypothetical protein.)
genome : 82,173,599 - 82,175,956 (2,358)
query : 1 - 2,358 (2,358/2,358)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 25, mito 3.5, cyto 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008980)
HIX0008980
HIT000384517
(
AK225387
)
(Redox-regulatory protein FAM213A; Peroxiredoxin-like 2 activated in M-CSF stimulated monocytes; Protein PAMM;)
genome : 82,173,601 - 82,196,870 (23,270)
query : 1 - 1,596 (1,596/1,612)
8 exons
identity = 0.991
5'(1.000;0.994;1.000;0.993;0.994;1.000;0.943;
0.992)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, E.R. 9, mito 3.5, cyto_mito 3.5, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008980)
HIX0008980
HIT000011130
(
AK027858
)
(Redox-regulatory protein FAM213A isoform 1 precursor.)
genome : 82,177,974 - 82,184,161 (6,188)
query : 1 - 6,193 (6,193/6,193)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 21, E.R. 4, mito 3.5, cyto_mito 3, cyto 1.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008980)
HIX0008980
HIT000090939
(
BC024308
)
(Redox-regulatory protein FAM213A; Peroxiredoxin-like 2 activated in M-CSF stimulated monocytes; Protein PAMM;)
genome : 82,179,754 - 82,192,392 (12,639)
query : 11 - 1,707 (1,697/1,733)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.994
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, E.R. 9, mito 3.5, cyto_mito 3.5, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008980)
HIX0008980
HIT000353461 (
ENST00000372181
)
(Redox-regulatory protein FAM213A; Peroxiredoxin-like 2 activated in M-CSF stimulated monocytes; Protein PAMM;)
genome : 82,179,754 - 82,192,753 (13,000)
query : 1 - 2,058 (2,058/2,058)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, E.R. 9, mito 3.5, cyto_mito 3.5, cyto 2.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008980)
HIX0008980
HIT000032489
(
BC005871
)
(Redox-regulatory protein FAM213A; Peroxiredoxin-like 2 activated in M-CSF stimulated monocytes; Protein PAMM;)
genome : 82,180,221 - 82,192,392 (12,172)
query : 20 - 1,249 (1,230/1,269)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.985
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, E.R. 9, mito 3.5, cyto_mito 3.5, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008980)
HIX0008980
HIT000264745
(
BC071938
)
(Redox-regulatory protein FAM213A; Peroxiredoxin-like 2 activated in M-CSF stimulated monocytes; Protein PAMM;)
genome : 82,180,221 - 82,192,392 (12,172)
query : 20 - 1,249 (1,230/1,269)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.985
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15, E.R. 9, mito 3.5, cyto_mito 3.5, cyto 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008980)
HIX0008980
HIT000076798
(
AF305824
)
(Redox-regulatory protein FAM213A isoform 2 precursor.)
genome : 82,182,179 - 82,192,392 (10,214)
query : 1 - 1,042 (1,042/1,172)
4 exons
identity = 0.998
5'(1.000;1.000;1.000;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 20.5, cyto_nucl 13.5, nucl 5.5, mito 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008980)
HIX0008980
HIT000098200
(
BC045777
)
(Conserved hypothetical protein.)
genome : 82,182,221 - 82,184,162 (1,942)
query : 1 - 1,940 (1,940/1,955)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 19, cyto 8.5, cyto_nucl 5.5, mito 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008980)
HIX0020350
HIT000005872
(
AK022598
)
Representative transcript
(Conserved hypothetical protein.)
genome : 82,194,765 - 82,196,869 (2,105)
query : 1 - 2,102 (2,102/2,102)
1 exon
identity = 0.990
3'(0.990)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 20, extr 5, cyto_pero 2.5, nucl 2, cyto 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0020350)
HIX0035534
HIT000087613
(
BC011242
)
Representative transcript
(Conserved hypothetical protein.)
genome : 82,208,691 - 82,210,628 (1,938)
query : 1 - 1,938 (1,938/1,963)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito_nucl 11.8333, nucl 11.5, mito 10, extr 8,
cyto_nucl 6.66667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0035534)
HIX0218876
HIT000585107 (
ENST00000481124
)
(Tetraspanin/Peripherin family protein.)
genome : 82,214,021 - 82,277,972 (63,952)
query : 1 - 808 (808/808)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 24, nucl 4, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218876)
HIX0218876
HIT000489945
(
AK295321
)
Representative transcript
(Tetraspanin/Peripherin family protein.)
genome : 82,214,067 - 82,278,201 (64,135)
query : 1 - 991 (991/991)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
InterPro :
IPR008952 : Tetraspanin, EC2 domain
IPR018499 : Tetraspanin/Peripherin
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 24, nucl 4, pero 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218876)
HIX0218876
HIT000353437 (
ENST00000372157
)
(Tetraspanin/Peripherin family protein.)
genome : 82,214,078 - 82,276,079 (62,002)
query : 1 - 837 (837/855)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 0.979
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218876)
HIX0218876
HIT000573685 (
ENST00000469149
)
(Tetraspanin/Peripherin family protein.)
genome : 82,214,085 - 82,269,676 (55,592)
query : 1 - 959 (959/959)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 30
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218876)
HIX0218876
HIT000353436 (
ENST00000372156
)
(Tetraspanin/Peripherin family protein.)
genome : 82,219,058 - 82,277,797 (58,740)
query : 1 - 1,380 (1,380/1,380)
12 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218876)
HIX0218876
HIT000353438 (
ENST00000372158
)
(Tetraspanin/Peripherin family protein.)
genome : 82,222,843 - 82,277,797 (54,955)
query : 19 - 1,095 (1,077/1,095)
10 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000)3'
coverage = 0.984
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218876)
HIX0218876
HIT000134493 (
ENST00000341863
)
(Tetraspanin/Peripherin family protein.)
genome : 82,248,968 - 82,278,093 (29,126)
query : 13 - 1,037 (1,025/1,037)
7 exons
identity = 0.999
5'(0.990;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.988
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218876)
HIX0019338
HIT000011468
(
AK054854
)
Representative transcript
(Conserved hypothetical protein.)
genome : 82,250,307 - 82,252,571 (2,265)
query : 1 - 2,265 (2,265/2,265)
1 exon
identity = 0.999
5'(0.999)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 27, nucl 3.5, cyto_nucl 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0019338)
HIX0218801
HIT000008431
(
AK025157
)
Representative transcript
(Conserved hypothetical protein.)
genome : 82,278,647 - 82,281,668 (3,022)
query : 1 - 3,026 (3,026/3,044)
1 exon
identity = 0.996
5'(0.996)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 13, mito 10, nucl 5, E.R._mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218801)
HIX0218801
HIT000009895
(
AK026621
)
(Conserved hypothetical protein.)
genome : 82,280,399 - 82,281,668 (1,270)
query : 1 - 1,270 (1,270/1,288)
1 exon
identity = 1.000
5'(1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 24, mito 4, cyto 2.5, cyto_nucl 2.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0218801)
HIX0170686
HIT000515493 (
ENST00000417559
)
(Hypothetical protein.)
genome : 82,289,353 - 82,295,698 (6,346)
query : 1 - 598 (598/598)
2 exons
identity = 1.000
3'(1.000;1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 28, nucl 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170686)
HIX0201488
HIT000043758
(
AK123885
)
Representative transcript
(SH2 domain-containing protein 4B isoform 1.)
genome : 82,297,658 - 82,406,316 (108,659)
query : 1 - 3,983 (3,983/3,983)
7 exons
identity = 0.999
5'(1.000;1.000;0.993;0.993;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, nucl 15, cyto 14
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201488)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AB060840
Mus
sp. (Mouse) : AK050671
Equus
sp. (Horse) : ENSECAT00000004330
Gallus
sp. (Chicken) : ENSGALT00000003735
Pongo
sp. (Orangutan) : ENSPPYT00000002749
Pan
sp. (Chimpanzee) : ENSPTRT00000005075
Rattus
sp. (Rat) : ENSRNOT00000032309
Danio
sp. (Zebrafish) : XM_001339703
Monodelphis
sp. (Opossum) : XM_001365422
Canis
sp. (Dog) : XM_536404
Danio
sp. (Zebrafish) : XM_683956
Bos
sp. (Cow) : XR_028485
HIX0201488
HIT000131914 (
ENST00000339284
)
(SH2 domain-containing protein 4B isoform 1.)
genome : 82,297,658 - 82,406,316 (108,659)
query : 1 - 3,983 (3,983/3,983)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, nucl 15, cyto 14
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201488)
HIX0201488
HIT000320375 (
NM_207372
)
(SH2 domain-containing protein 4B isoform 1.)
genome : 82,297,658 - 82,406,316 (108,659)
query : 1 - 3,983 (3,983/3,983)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto_nucl 15.5, nucl 15, cyto 14
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201488)
HIX0201488
HIT000575072 (
ENST00000470604
)
(SH2 domain-containing protein 4B isoform 1.)
genome : 82,298,088 - 82,406,316 (108,229)
query : 1 - 3,771 (3,771/3,771)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15.5, cyto_nucl 15, nucl 11.5, pero 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201488)
HIX0201488
HIT000119753 (
ENST00000313455
)
(SH2 domain-containing protein 4B isoform 2.)
genome : 82,300,575 - 82,406,316 (105,742)
query : 1 - 3,487 (3,487/3,487)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 15.5, nucl 6, extr 4
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201488)
HIX0201488
HIT000561470 (
NM_001145719
)
(SH2 domain-containing protein 4B isoform 2.)
genome : 82,300,575 - 82,406,316 (105,742)
query : 1 - 3,487 (3,487/3,487)
7 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 15.5, nucl 6, extr 4
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201488)
HIX0201488
HIT000043851
(
AK123978
)
(SH2 domain-containing protein 4B isoform 2.)
genome : 82,300,575 - 82,405,718 (105,144)
query : 1 - 2,889 (2,889/2,889)
7 exons
identity = 0.999
5'(1.000;1.000;1.000;0.993;0.995;0.992;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 21, cyto_nucl 15.5, nucl 6, extr 4
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201488)
HIX0201488
HIT000353430 (
ENST00000372150
)
(SH2 domain-containing protein 4B isoform 1.)
genome : 82,367,055 - 82,406,314 (39,260)
query : 1 - 2,896 (2,896/2,896)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 24, mito 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201488)
HIX0201488
HIT000016385
(
AK091518
)
(Conserved hypothetical protein.)
genome : 82,402,752 - 82,406,314 (3,563)
query : 1 - 2,626 (2,626/2,626)
2 exons
identity = 0.999
5'(1.000;0.999)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25.5, mito_pero 14, cyto 2.5, cyto_nucl 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201488)
HIX0201488
HIT000585506 (
ENST00000481537
)
(Conserved hypothetical protein.)
genome : 82,402,752 - 82,406,314 (3,563)
query : 1 - 2,626 (2,626/2,626)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25.5, mito_pero 14, cyto 2.5, cyto_nucl 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201488)
HIX0201571
HIT000534434 (
ENST00000436500
)
(Hypothetical short protein.)
genome : 82,409,553 - 82,413,488 (3,936)
query : 1 - 370 (370/370)
3 exons
identity = 1.000
5'(1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201571)
HIX0170645
HIT000512638 (
ENST00000414704
)
(Conserved hypothetical protein.)
genome : 82,476,239 - 82,476,824 (586)
query : 1 - 586 (586/586)
1 exon
identity = 1.000
3'(1.000)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
cyto 15, extr 9, cyto_nucl 9, mito 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170645)
HIX0171220
HIT000554179 (
ENST00000456245
)
(Conserved hypothetical protein.)
genome : 82,509,388 - 82,510,987 (1,600)
query : 1 - 405 (405/405)
2 exons
identity = 0.993
3'(1.000;0.988)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 12, mito 10, cyto 6.5, cyto_pero 4.5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0171220)
HIX0170935
HIT000533742 (
ENST00000435808
)
(Conserved hypothetical protein.)
genome : 82,535,921 - 82,537,844 (1,924)
query : 1 - 1,778 (1,778/1,778)
2 exons
identity = 0.997
3'(1.000;0.993)5'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 15, cyto 10, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0170935)
HIX0219101
HIT000317404 (
NM_020338
)
(Zinc finger MIZ domain-containing protein 1; PIAS-like protein Zimp10; Retinoic acid-induced protein 17;)
genome : 80,828,792 - 81,076,285 (247,494)
query : 1 - 7,555 (7,555/7,555)
25 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto 9, plas 5, cyto_mito 5
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219101)
HIX0219101
HIT000129005 (
ENST00000334512
)
(Zinc finger MIZ domain-containing protein 1; PIAS-like protein Zimp10; Retinoic acid-induced protein 17;)
genome : 80,828,792 - 81,076,276 (247,485)
query : 1 - 7,546 (7,546/7,546)
25 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto 9, plas 5, cyto_mito 5
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219101)
HIX0219101
HIT000086783
(
BC007288
)
(Zinc finger MIZ domain-containing protein 1; PIAS-like protein Zimp10; Retinoic acid-induced protein 17;)
genome : 80,828,792 - 81,058,228 (229,437)
query : 1 - 2,129 (2,129/2,175)
15 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;0.995;1.000;
1.000)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219101)
HIX0219101
HIT000251129
(
AY235683
)
Representative transcript
(Zinc finger MIZ domain-containing protein 1; PIAS-like protein Zimp10; Retinoic acid-induced protein 17;)
genome : 80,961,339 - 81,076,273 (114,935)
query : 20 - 7,040 (7,021/7,040)
21 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.996;1.000;1.000;0.998)3'
coverage = 0.997
InterPro :
IPR004181 : Zinc finger, MIZ-type
GO :
0008270 : Molecular Function : zinc ion binding
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 13, cyto 9, plas 5, cyto_mito 5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219101)
Ortholog candidate ( ->
Evola
)
Mus
sp. (Mouse) : BC058646
Danio
sp. (Zebrafish) : BC155843
Gallus
sp. (Chicken) : CR406297
Equus
sp. (Horse) : ENSECAT00000023241
Monodelphis
sp. (Opossum) : ENSMODT00000001359
Oryzias
sp. (Medaka) : ENSORLT00000001813
Oryzias
sp. (Medaka) : ENSORLT00000008438
Oryzias
sp. (Medaka) : ENSORLT00000011201
Pongo
sp. (Orangutan) : ENSPPYT00000002766
Tetraodon
sp. (Tetraodon) : GSTENT00024650001
Takifugu
sp. (Fugu) : SINFRUT00000152528
Takifugu
sp. (Fugu) : SINFRUT00000154993
Rattus
sp. (Rat) : XM_001054961
Macaca
sp. (Macaque) : XM_001090830
Pan
sp. (Chimpanzee) : XM_521521
Canis
sp. (Dog) : XM_846771
Bos
sp. (Cow) : XM_868846
HIX0219101
HIT000389807
(
BC128396
)
(Zinc finger MIZ domain-containing protein 1; PIAS-like protein Zimp10; Retinoic acid-induced protein 17;)
genome : 80,961,352 - 81,075,510 (114,159)
query : 1 - 4,070 (4,070/4,078)
7 exons
identity = 0.997
5'(0.976;0.994;1.000;0.999)3'
coverage = 0.998
SOSUI :
SOLUBLE PROTEIN
PSORT :
nucl 25, extr 3, cyto 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219101)
HIX0219101
HIT000389808
(
BC128397
)
(Zinc finger MIZ domain-containing protein 1; PIAS-like protein Zimp10; Retinoic acid-induced protein 17;)
genome : 80,961,352 - 81,075,510 (114,159)
query : 1 - 2,398 (2,398/2,406)
5 exons
identity = 0.999
5'(1.000;0.998)3'
coverage = 0.997
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 14, cyto 10.5, cyto_nucl 9, nucl 6.5
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219101)
HIX0219101
HIT000387821
(
BC117687
)
(Zinc finger MIZ domain-containing protein 1; PIAS-like protein Zimp10; Retinoic acid-induced protein 17;)
genome : 80,961,352 - 81,075,510 (114,159)
query : 1 - 2,195 (2,195/2,195)
5 exons
identity = 0.993
5'(0.946;0.997)3'
coverage = 1.000
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 16, nucl 10, cyto 6
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0219101)
HIX0008969
HIT000202396 (
NM_005729
)
(Peptidyl-prolyl cis-trans isomerase F, mitochondrial; PPIase F; EC=5.2.1.8; Cyclophilin D; CyP-D; CypD; Cyclophilin F; Mitochondrial cyclophilin; CyP-M; Rotamase F; Precursor;)
genome : 81,107,220 - 81,115,088 (7,869)
query : 1 - 2,199 (2,199/2,213)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 5.2.1.8
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23.5, mito_pero 12.5, extr 7
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008969)
HIX0008969
HIT000196425
(
M80254
)
(Peptidyl-prolyl cis-trans isomerase F, mitochondrial; PPIase F; EC=5.2.1.8; Cyclophilin D; CyP-D; CypD; Cyclophilin F; Mitochondrial cyclophilin; CyP-M; Rotamase F; Precursor;)
genome : 81,107,228 - 81,113,748 (6,521)
query : 7 - 857 (851/865)
6 exons
identity = 0.996
5'(0.989;1.000;1.000;1.000;1.000;1.000)3'
coverage = 0.984
EC number :
EC 5.2.1.8
InterPro :
IPR002130 : Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain
IPR020892 : Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site
IPR029000 : Cyclophilin-like domain
GO :
0003755 : Molecular Function : peptidyl-prolyl cis-trans isomerase activity
0006457 : Biological Process : protein folding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23.5, mito_pero 12.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008969)
HIX0008969
HIT000431623
(
AK312757
)
(Peptidyl-prolyl cis-trans isomerase F, mitochondrial; PPIase F; EC=5.2.1.8; Cyclophilin D; CyP-D; CypD; Cyclophilin F; Mitochondrial cyclophilin; CyP-M; Rotamase F; Precursor;)
genome : 81,107,225 - 81,113,598 (6,374)
query : 1 - 704 (704/704)
6 exons
identity = 0.999
5'(1.000;0.968;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 5.2.1.8
InterPro :
IPR002130 : Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain
IPR020892 : Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site
IPR029000 : Cyclophilin-like domain
GO :
0003755 : Molecular Function : peptidyl-prolyl cis-trans isomerase activity
0006457 : Biological Process : protein folding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23.5, mito_pero 12.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008969)
HIX0008969
HIT000576949 (
ENST00000472580
)
(Peptidyl-prolyl cis-trans isomerase F, mitochondrial; PPIase F; EC=5.2.1.8; Cyclophilin D; CyP-D; CypD; Cyclophilin F; Mitochondrial cyclophilin; CyP-M; Rotamase F; Precursor;)
genome : 81,107,225 - 81,113,462 (6,238)
query : 1 - 761 (761/761)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 5.2.1.8
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008969)
HIX0008969
HIT000601890 (
ENST00000498681
)
(Peptidyl-prolyl cis-trans isomerase F, mitochondrial; PPIase F; EC=5.2.1.8; Cyclophilin D; CyP-D; CypD; Cyclophilin F; Mitochondrial cyclophilin; CyP-M; Rotamase F; Precursor;)
genome : 81,107,225 - 81,111,365 (4,141)
query : 1 - 518 (518/518)
4 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 5.2.1.8
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 25, extr 6
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008969)
HIX0008969
HIT000477985 (
ENST00000394579
)
(Peptidyl-prolyl cis-trans isomerase F, mitochondrial; PPIase F; EC=5.2.1.8; Cyclophilin D; CyP-D; CypD; Cyclophilin F; Mitochondrial cyclophilin; CyP-M; Rotamase F; Precursor;)
genome : 81,107,227 - 81,114,230 (7,004)
query : 1 - 1,258 (1,258/1,258)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 5.2.1.8
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, extr 9
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008969)
HIX0008969
HIT000491293
(
AK296669
)
(Peptidyl-prolyl cis-trans isomerase F, mitochondrial; PPIase F; EC=5.2.1.8; Cyclophilin D; CyP-D; CypD; Cyclophilin F; Mitochondrial cyclophilin; CyP-M; Rotamase F; Precursor;)
genome : 81,107,227 - 81,114,230 (7,004)
query : 1 - 1,258 (1,258/1,258)
5 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;0.999)3'
coverage = 1.000
EC number :
EC 5.2.1.8
InterPro :
IPR002130 : Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain
IPR020892 : Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site
IPR029000 : Cyclophilin-like domain
GO :
0003755 : Molecular Function : peptidyl-prolyl cis-trans isomerase activity
0006457 : Biological Process : protein folding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, extr 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008969)
HIX0008969
HIT000103869 (
ENST00000225174
)
(Peptidyl-prolyl cis-trans isomerase F, mitochondrial; PPIase F; EC=5.2.1.8; Cyclophilin D; CyP-D; CypD; Cyclophilin F; Mitochondrial cyclophilin; CyP-M; Rotamase F; Precursor;)
genome : 81,107,234 - 81,115,093 (7,860)
query : 1 - 2,190 (2,190/2,190)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 5.2.1.8
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23.5, mito_pero 12.5, extr 7
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008969)
HIX0008969
HIT000032161
(
BC005020
)
(Peptidyl-prolyl cis-trans isomerase F, mitochondrial; PPIase F; EC=5.2.1.8; Cyclophilin D; CyP-D; CypD; Cyclophilin F; Mitochondrial cyclophilin; CyP-M; Rotamase F; Precursor;)
genome : 81,107,234 - 81,114,472 (7,239)
query : 1 - 1,569 (1,569/1,591)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 5.2.1.8
InterPro :
IPR002130 : Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain
IPR020892 : Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site
IPR029000 : Cyclophilin-like domain
GO :
0003755 : Molecular Function : peptidyl-prolyl cis-trans isomerase activity
0006457 : Biological Process : protein folding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23.5, mito_pero 12.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008969)
HIX0008969
HIT000339474
(
BC110299
)
(Peptidyl-prolyl cis-trans isomerase F, mitochondrial; PPIase F; EC=5.2.1.8; Cyclophilin D; CyP-D; CypD; Cyclophilin F; Mitochondrial cyclophilin; CyP-M; Rotamase F; Precursor;)
genome : 81,107,243 - 81,115,093 (7,851)
query : 1 - 2,105 (2,105/2,132)
5 exons
identity = 0.998
5'(1.000;1.000;0.989;1.000;0.998)3'
coverage = 1.000
EC number :
EC 5.2.1.8
InterPro :
IPR002130 : Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain
IPR020892 : Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site
IPR029000 : Cyclophilin-like domain
GO :
0003755 : Molecular Function : peptidyl-prolyl cis-trans isomerase activity
0006457 : Biological Process : protein folding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 22, extr 9
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008969)
HIX0008969
HIT000088040
(
BC013204
)
Representative transcript
(Peptidyl-prolyl cis-trans isomerase F, mitochondrial; PPIase F; EC=5.2.1.8; Cyclophilin D; CyP-D; CypD; Cyclophilin F; Mitochondrial cyclophilin; CyP-M; Rotamase F; Precursor;)
genome : 81,107,243 - 81,115,088 (7,846)
query : 1 - 2,176 (2,176/2,190)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 5.2.1.8
InterPro :
IPR002130 : Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain
IPR020892 : Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site
IPR029000 : Cyclophilin-like domain
GO :
0003755 : Molecular Function : peptidyl-prolyl cis-trans isomerase activity
0006457 : Biological Process : protein folding
SOSUI :
SOLUBLE PROTEIN
PSORT :
mito 23.5, mito_pero 12.5, extr 7
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008969)
Ortholog candidate ( ->
Evola
)
Macaca
sp. (Macaque) : AF252388
Gallus
sp. (Chicken) : AJ719394
Bos
sp. (Cow) : AY594335
Mus
sp. (Mouse) : BC004041
Danio
sp. (Zebrafish) : BC071370
Rattus
sp. (Rat) : BC086977
Tetraodon
sp. (Tetraodon) : CR720665
Equus
sp. (Horse) : ENSECAT00000009285
Monodelphis
sp. (Opossum) : ENSMODT00000001371
Oryzias
sp. (Medaka) : ENSORLT00000008394
Oryzias
sp. (Medaka) : ENSORLT00000011153
Pongo
sp. (Orangutan) : ENSPPYT00000002765
Takifugu
sp. (Fugu) : SINFRUT00000152535
Takifugu
sp. (Fugu) : SINFRUT00000154998
Pan
sp. (Chimpanzee) : XM_001151591
Canis
sp. (Dog) : XM_848021
HIX0008969
HIT000546099 (
ENST00000448165
)
(Peptidyl-prolyl cis-trans isomerase F, mitochondrial; PPIase F; EC=5.2.1.8; Cyclophilin D; CyP-D; CypD; Cyclophilin F; Mitochondrial cyclophilin; CyP-M; Rotamase F; Precursor;)
genome : 81,107,414 - 81,113,842 (6,429)
query : 1 - 821 (821/821)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
EC number :
EC 5.2.1.8
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 10, cyto_nucl 10, nucl 9.5, cyto 7.5, mito 3
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008969)
HIX0008969
HIT000027632
(
AL832720
)
(Peptidyl-prolyl cis-trans isomerase F, mitochondrial; PPIase F; EC=5.2.1.8; Cyclophilin D; CyP-D; CypD; Cyclophilin F; Mitochondrial cyclophilin; CyP-M; Rotamase F; Precursor;)
genome : 81,109,892 - 81,114,470 (4,579)
query : 1 - 4,579 (4,579/4,609)
1 exon
identity = 0.997
5'(0.997)3'
coverage = 1.000
EC number :
EC 5.2.1.8
SOSUI :
SOLUBLE PROTEIN
PSORT :
extr 17, cyto 6.5, cyto_nucl 6.33333,
cyto_pero 4.16667, mito_nucl 4.16667
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0008969)
HIX0201478
HIT000527923 (
ENST00000429989
)
(Tetraspanin-14; Tspan-14; DC-TM4F2; Transmembrane 4 superfamily member 14;)
genome : 82,213,922 - 82,282,387 (68,466)
query : 1 - 5,691 (5,691/5,691)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201478)
HIX0201478
HIT000210013 (
NM_030927
)
(Tetraspanin-14; Tspan-14; DC-TM4F2; Transmembrane 4 superfamily member 14;)
genome : 82,214,038 - 82,282,391 (68,354)
query : 1 - 5,579 (5,579/5,579)
9 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201478)
HIX0201478
HIT000559447 (
NM_001128309
)
(Tetraspanin-14 isoform 2.)
genome : 82,214,038 - 82,282,391 (68,354)
query : 1 - 5,210 (5,210/5,210)
6 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
cyto 24, nucl 4, pero 2
RefSeq
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201478)
HIX0201478
HIT000334507
(
BC093016
)
Representative transcript
(Tetraspanin-14; Tspan-14; DC-TM4F2; Transmembrane 4 superfamily member 14;)
genome : 82,214,038 - 82,279,390 (65,353)
query : 1 - 1,948 (1,948/1,964)
11 exons
identity = 0.993
5'(0.989;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;1.000;1.000;0.978)3'
coverage = 0.999
InterPro :
IPR000301 : Tetraspanin
IPR008952 : Tetraspanin, EC2 domain
IPR018499 : Tetraspanin/Peripherin
IPR018503 : Tetraspanin, conserved site
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201478)
Ortholog candidate ( ->
Evola
)
Gallus
sp. (Chicken) : AJ719658
Mus
sp. (Mouse) : AK030593
Danio
sp. (Zebrafish) : BC086749
Bos
sp. (Cow) : BC105533
Danio
sp. (Zebrafish) : BC122351
Tetraodon
sp. (Tetraodon) : CR717229
Equus
sp. (Horse) : ENSECAT00000007925
Oryzias
sp. (Medaka) : ENSORLT00000004256
Pan
sp. (Chimpanzee) : ENSPTRT00000057673
Takifugu
sp. (Fugu) : SINFRUT00000140017
Takifugu
sp. (Fugu) : SINFRUT00000141612
Macaca
sp. (Macaque) : XM_001094353
Monodelphis
sp. (Opossum) : XM_001365355
Canis
sp. (Dog) : XM_848106
HIX0201478
HIT000081593
(
AK074558
)
(Tetraspanin-14 isoform 1.)
genome : 82,214,067 - 82,281,515 (67,449)
query : 1 - 1,439 (1,439/1,439)
5 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
extr 15.5, mito 11, extr_plas 8.5, lyso 3
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201478)
HIX0201478
HIT000025234
(
AL136638
)
(Tetraspanin-14; Tspan-14; DC-TM4F2; Transmembrane 4 superfamily member 14;)
genome : 82,214,067 - 82,279,385 (65,319)
query : 1 - 2,547 (2,547/2,556)
9 exons
identity = 0.996
5'(1.000;1.000;1.000;1.000;0.994;1.000;1.000;
1.000;0.995)3'
coverage = 1.000
InterPro :
IPR000301 : Tetraspanin
IPR008952 : Tetraspanin, EC2 domain
IPR018499 : Tetraspanin/Peripherin
IPR018503 : Tetraspanin, conserved site
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201478)
HIX0201478
HIT000077021
(
AF311903
)
(Tetraspanin-14; Tspan-14; DC-TM4F2; Transmembrane 4 superfamily member 14;)
genome : 82,214,073 - 82,279,385 (65,313)
query : 1 - 2,539 (2,539/2,553)
9 exons
identity = 0.998
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000;0.997)3'
coverage = 1.000
InterPro :
IPR000301 : Tetraspanin
IPR008952 : Tetraspanin, EC2 domain
IPR018499 : Tetraspanin/Peripherin
IPR018503 : Tetraspanin, conserved site
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201478)
HIX0201478
HIT000353444 (
ENST00000372164
)
(Tetraspanin-14; Tspan-14; DC-TM4F2; Transmembrane 4 superfamily member 14;)
genome : 82,214,086 - 82,282,387 (68,302)
query : 1 - 5,476 (5,476/5,476)
8 exons
identity = 1.000
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201478)
HIX0201478
HIT000031289
(
BC002920
)
(Tetraspanin-14; Tspan-14; DC-TM4F2; Transmembrane 4 superfamily member 14;)
genome : 82,214,092 - 82,279,385 (65,294)
query : 1 - 2,470 (2,470/2,493)
8 exons
identity = 0.999
5'(1.000;1.000;1.000;1.000;1.000;1.000;1.000;
0.999)3'
coverage = 1.000
InterPro :
IPR000301 : Tetraspanin
IPR008952 : Tetraspanin, EC2 domain
IPR018499 : Tetraspanin/Peripherin
IPR018503 : Tetraspanin, conserved site
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 32
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201478)
HIX0201478
HIT000011944
(
AK055330
)
(Tetraspanin-14 isoform 2.)
genome : 82,275,223 - 82,279,391 (4,169)
query : 1 - 2,594 (2,594/2,605)
2 exons
identity = 0.996
5'(0.996;0.996)3'
coverage = 1.000
InterPro :
IPR018499 : Tetraspanin/Peripherin
GO :
0016021 : Cellular Component : integral component of membrane
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25.5, extr_plas 14, cyto 2, mito 2, cyto_mito 2
H-InvDB(Transcript view)
H-InvDB(Locus view)
DDBJ
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201478)
HIX0201478
HIT000109720 (
ENST00000265450
)
(Tetraspanin-14 isoform 2.)
genome : 82,275,223 - 82,279,391 (4,169)
query : 1 - 2,588 (2,588/2,588)
2 exons
identity = 1.000
5'(1.000;1.000)3'
coverage = 1.000
SOSUI :
MEMBRANE PROTEIN
PSORT :
plas 25.5, extr_plas 14, cyto 2, mito 2, cyto_mito 2
Ensembl
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0201478)
HIX0128320
pHIT000109193 ( pHIT000109193 )
Representative transcript
(Conserved hypothetical protein.)
genome : 81,652,045 - 81,652,931 (887)
query : 1 - 771 (771/771)
2 exons
InterPro :
IPR001330 : Prenyltransferase/squalene oxidase
IPR008930 : Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid
GO :
0003824 : Molecular Function : catalytic activity
SOSUI :
SOLUBLE PROTEIN
JIGSAW prediction
cDNA-genome Alignment
cDNA Multiple Alignment
(HIX0128320)
CAGE tag :
T10R04DDC5B7
AL391665.28
81000001-81112227 F +
NCBI
AL133481.14
81112228-81277461 F +
NCBI
BX248123.5
81277462-81410088 F +
NCBI
AL132656.15
81410089-81561458 F +
NCBI
AL135925.10
81561459-81621601 F +
NCBI
AL512662.8
81621602-81755912 F +
NCBI
AL356095.11
81755913-81927891 F +
NCBI
AL513174.19
81927892-82006375 F +
NCBI
AL359195.24
82006376-82175523 F +
NCBI
AC021028.12
82175524-82328548 F +
NCBI
AL731544.11
82328549-82425421 F +
NCBI
AL732389.4
82425422-82491178 F +
NCBI
AC027673.9
82491179-82600000 F +
NCBI